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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010862 ID=TCONS_00010862|Name=TCONS_00010862|organism=Clytia hemisphaerica|type=transcript|length=807bp
CTCAAGGGTTCcaaaataatattgatttttcaagggtttcaaggaaattt
tcaaaGGCAGGAAAAAATTAAGGGTATTTACAGAGTTGGGAGGATTTCAA
GGGTCGCCGGCCACCATGgaatgttctttttatttagTCTAATAATATGG
CATACAAACGATCCGTAGCGCAAATAGATGATTGCGTCTCCGAGTTTTTT
ACAAAGGAAAACCCGAACGTCGGACTGGGCGTGGTAATCAAAAATTCGTC
CAGCTATAATTTGGAGTATGTAAATAATGGAGTGATTTCAGGGTGGTGTG
TGGAGCCAGTGGttcaaatgttttcaaaagatgtttatATGATCGAGCCA
GGTCAAGCAGGTGCATTAATGTGGCATAGGCATGGATGGGGTGAATTTGG
GAAATGGGTTGGCAATATCGCTAGTCTTGGCATAGCACATTCTGGCGCTC
AGAGTTACGTTGAAGGGTATATCTCAGTGAAGGCACGAACGCCTGGTAAA
AATCACATTGTCTGTCTCGGTTTTTCATTGGGAAGAAACAGATGTAATAA
ATGTGGGATTCAAATCCGTGGTGAAGATGGCGTCCTGGATGCGAATGGAA
ATGTTTCTGGACATGGGACCGACCCAACTGGTAATGTAACAGATATTAGT
GCACTGGCATATTCAGTTGCTTTCACAGAGTTTAATAAAGATTCAAGAGG
AATTTCATGGCACGAATTCAACGAAGAAACAAGAGCTTTGAGAATCAAAT
GCAAAATGAATAACGAGAACCATGGTGTCATCAACTTCGAAGTCTTTGAT
GGCAAAG Run BLAST on NCBI protein sequence of TCONS_00010862-protein >TCONS_00010862-protein ID=TCONS_00010862-protein|Name=TCONS_00010862-protein|organism=Clytia hemisphaerica|type=polypeptide|length=220bp
MAYKRSVAQIDDCVSEFFTKENPNVGLGVVIKNSSSYNLEYVNNGVISGW
CVEPVVQMFSKDVYMIEPGQAGALMWHRHGWGEFGKWVGNIASLGIAHSG
AQSYVEGYISVKARTPGKNHIVCLGFSLGRNRCNKCGIQIRGEDGVLDAN
GNVSGHGTDPTGNVTDISALAYSVAFTEFNKDSRGISWHEFNEETRALRI
KCKMNNENHGVINFEVFDGK Run BLAST on NCBI transcript from alignment at sc0000118:48091..49203+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010862 ID=TCONS_00010862|Name=TCONS_00010862|organism=Clytia hemisphaerica|type=transcript|length=1113bp|location=Sequence derived from alignment at sc0000118:48091..49203+ (Clytia hemisphaerica)
CTCAAGGGTTCcaaaataatattgatttttcaagggtttcaaggaaattt
tcaaaGGCAGGAAAAAATTAAGGGTATTTACAGAGTTGGGAGGATTTCAA
GGGTCGCCGGCCACCATGgaatgttctttttatttagTCTAATAATATGG
CATACAAACGATCCGTAGCGCAAATAGATGATTGCGTCTCCGAGTTTTTT
ACAAAGGAAAACCCGAACGTCGGACTGGGCGTGGTAATCAAAAATTCGTC
CAGCTATAATTTGGAGTATGTAAATAATGGAGTGATTTCAGGGTGGTGTG
TGGAGCCAGTGGttcaaatgttttcaaaagatgtttatATGATCGAGCCA
GGTCAAGCAGGTGCATTAATGTGGCATAGGCATGGATGGGGTGAATTTGG
TATGTTATAAAATTCAGAACATTATCTACCCTAGATAGATATAGCGTTTT
TAAGTCTGGTGTGATCATATTCAGACAGAACTTTCATAAGCAAAATATAG
TCAACTTTCTCTTATTCTTACCTCTAATATTCGTATCTTTCCATAATCCG
AACAAAAACATTACGCCACTTGCCCTTAGCTGGAAGGAGGTGTAAAAACT
CTCCGTAATCCGAATCAAGAAGGTTTTTGCTTGAAGATCGAACTAGAGAG
AATAAGCTGTATCCATGAACTTTCCATAACATCTATTTATCTTTATTTAC
TTAAGGGAAATGGGTTGGCAATATCGCTAGTCTTGGCATAGCACATTCTG
GCGCTCAGAGTTACGTTGAAGGGTATATCTCAGTGAAGGCACGAACGCCT
GGTAAAAATCACATTGTCTGTCTCGGTTTTTCATTGGGAAGAAACAGATG
TAATAAATGTGGGATTCAAATCCGTGGTGAAGATGGCGTCCTGGATGCGA
ATGGAAATGTTTCTGGACATGGGACCGACCCAACTGGTAATGTAACAGAT
ATTAGTGCACTGGCATATTCAGTTGCTTTCACAGAGTTTAATAAAGATTC
AAGAGGAATTTCATGGCACGAATTCAACGAAGAAACAAGAGCTTTGAGAA
TCAAATGCAAAATGAATAACGAGAACCATGGTGTCATCAACTTCGAAGTC
TTTGATGGCAAAG Coding sequence (CDS) from alignment at sc0000118:48091..49203+ >TCONS_00010862 ID=TCONS_00010862|Name=TCONS_00010862|organism=Clytia hemisphaerica|type=CDS|length=1320bp|location=Sequence derived from alignment at sc0000118:48091..49203+ (Clytia hemisphaerica)
ATGGCATACAAACGATCCGTAGCGCAAATAGATGATTGCGTCTCCGAGTT
TTTTACAAAGGAAAACCCGAACGTCGGACTGGGCGTGGTAATCAAAAATT
CGTCCAGCTATAATTTGGAGTATGTAAATAATGGAGTGATTTCAGGGTGG
TGTGTGGAGCCAGTGGttcaaatgttttcaaaagatgtttatATGATCGA
GCCAGGTCAAGCAGGTGCATTAATGTGGCATAGGCATGGATGGGGTGAAT
TTGGGAAATGGGTTGGCAATATCGCTAGTCTTGGCATAGCACATTCTGGC
GCTCAGAGTTACGTTGAAGGGTATATCTCAGTGAAGGCACGAACGCCTGG
TAAAAATCACATTGTCTGTCTCGGTTTTTCATTGGGAAGAAACAGATGTA
ATAAATGTGGGATTCAAATCCGTGGTGAAGATGGCGTCCTGGATGCGAAT
GGAAATGTTTCTGGACATGGGACCGACCCAACTGGTAATGTAACAGATAT
TAGTGCACTGGCATATTCAGTTGCTTTCACAGAGTTTAATAAAGATTCAA
GAGGAATTTCATGGCACGAATTCAACGAAGAAACAAGAGCTTTGAGAATC
AAATGCAAAATGAATAACGAGAACCATGGTGTCATCAACTTCGAAGTCTT
TGATGGCAAAATGGCATACAAACGATCCGTAGCGCAAATAGATGATTGCG
TCTCCGAGTTTTTTACAAAGGAAAACCCGAACGTCGGACTGGGCGTGGTA
ATCAAAAATTCGTCCAGCTATAATTTGGAGTATGTAAATAATGGAGTGAT
TTCAGGGTGGTGTGTGGAGCCAGTGGttcaaatgttttcaaaagatgttt
atATGATCGAGCCAGGTCAAGCAGGTGCATTAATGTGGCATAGGCATGGA
TGGGGTGAATTTGGGAAATGGGTTGGCAATATCGCTAGTCTTGGCATAGC
ACATTCTGGCGCTCAGAGTTACGTTGAAGGGTATATCTCAGTGAAGGCAC
GAACGCCTGGTAAAAATCACATTGTCTGTCTCGGTTTTTCATTGGGAAGA
AACAGATGTAATAAATGTGGGATTCAAATCCGTGGTGAAGATGGCGTCCT
GGATGCGAATGGAAATGTTTCTGGACATGGGACCGACCCAACTGGTAATG
TAACAGATATTAGTGCACTGGCATATTCAGTTGCTTTCACAGAGTTTAAT
AAAGATTCAAGAGGAATTTCATGGCACGAATTCAACGAAGAAACAAGAGC
TTTGAGAATCAAATGCAAAATGAATAACGAGAACCATGGTGTCATCAACT
TCGAAGTCTTTGATGGCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010862-exon-sc0000118-1491911889:48091..48489 | TCONS_00010862-exon-sc0000118-1491911889:48091..48489 | Clytia hemisphaerica | exon |
| TCONS_00010862-exon-sc0000118-1510915933:48091..48489 | TCONS_00010862-exon-sc0000118-1510915933:48091..48489 | Clytia hemisphaerica | exon |
| TCONS_00010862-exon-sc0000118-1575043694:48091..48489 | TCONS_00010862-exon-sc0000118-1575043694:48091..48489 | Clytia hemisphaerica | exon |
| TCONS_00010862-exon-sc0000118-1491911889:48796..49203 | TCONS_00010862-exon-sc0000118-1491911889:48796..49203 | Clytia hemisphaerica | exon |
| TCONS_00010862-exon-sc0000118-1510915933:48796..49203 | TCONS_00010862-exon-sc0000118-1510915933:48796..49203 | Clytia hemisphaerica | exon |
| TCONS_00010862-exon-sc0000118-1575043694:48796..49203 | TCONS_00010862-exon-sc0000118-1575043694:48796..49203 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000118 | supercontig | sc0000118:48091..49203 + |
Blast
The following BLAST results are available for this feature:
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