TCONS_00001121 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001121
Unique NameTCONS_00001121
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2235

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001121 ID=TCONS_00001121|Name=TCONS_00001121|organism=Clytia hemisphaerica|type=transcript|length=2235bp
ATGATTGCCTTTTTAGTGTTGAACTTTTTTCAGGAAATGGCCTCATTAAA
AAtttgtgtattttttttcttacagTGGTAGCTAATAAGTCTTTTTTAAT
ACAATGAATTGAAACACATGGAGTTGAGAAGCTGTGGTATATCGTCAAGA
ATTAATTTTGATGCTCATGTTTAACTAATACTGAATCTCACGGCTTTGTG
TAGTTTCCATtggattttgttttttgttgttggaaagatatttcaaagAG
GTTTTAGATGAAGTTATGATGATGTTTGAGCGATCAACTAGCCTCAGGCT
TCCACGCAACCAGACCGCAGCCAACAACGTTTTCTACCAATCACAACGCA
AGCAAAGAAAGACATCCTGTGTAACACCTGCGAGGAGGAGAGGCTCCAAG
CTTTGGGTTGATTCGTTCGAATATGACGAGAGTGATGGATGGACTCCTCA
ACAAATCAAGCGACAAGAGGCAATCTACGAATTATATTGCGGAGAAACAG
ACATGGTGGAAGACTTGAAACTGCTACAAGAGgtTTACTTCAATCCGGTG
gccaaattaaaacttttgacGGAAGAAGACCTCGCCTCCATCTTCGGAAA
TATTCAAGTTTTGCTACCGTTACACGAGGATTTGGTGAAACGTTTGGAAG
AAGTACGGACGGAGAACGGAAGCATCGAAGAGATCGGACGAATTTTGACG
GAATGGATTCCCACGTTGCGCCCTTACATTCCGTATTGCGCCAATCAACT
ACAAATGAAAAACATGCTCCTCCACAAGAccaaagaaaataaacactttt
cAGATTTCTTACAAAGATGTTTGGAATCGCCATTCAGCCGTAAACTAGAC
CTTTGGTCTTTCTTAGATTCACCTAGAAGCAAACTGGTGAAATATCCGCT
ACTTATCTCCAACATGCATAAATATACGCCGAAAGAACATCCAGATAATA
TCATCTTATACCAAGCAATTCAAGAATTGGAGGTTATAATAAAAGAGGCA
GATAAAGCCACAGGAAAATCGAAGAGTTCATTCTACAAAGACCGCATGTA
TTTTCTGGACGAAGGAGACCACAGAGAAGCATTATCTCAAGCACAAGTCC
TTCTTTGTCACGGTTCTCTCAAAAACAAGAATGGAGGGaaaatcgaaGCG
TTTCTCTTTGATACAGTATTTCTAATCACGCGGCCCGCTTCACGAAATGG
TATGGAAATGTATCAAGTATTATCTCAGCCTCTACTCACGAATGACATGG
AATATGCCAATGTCAGTGATGGTGAACTCAGGCTAGGTGGTTCATTTCGA
TCCAGTCTAACGAAGGGGCCGACAGCTAAATTTGCATTTCGTGTGAATCC
AAAAGAATTAACACGAGGTAAATCCATTATATTGCAAGCTAACGACCAAC
ATGACAAAAAACAATGGTTGAACGCTCTAAGCAAAGTAGCCTCAATGCCA
AGCAAAGGTGATCCAAGCTAGATGAGTAGAGTTGAGAACAGGTGGTGAAA
TGTGAGGGATGTCTTCGACAAGACAGTGATGATCTGCTCGATCAATTCGA
GCGAATGGCACCCTAAAGGATGCGATCGATATCGATTCGTCGACACTGAT
GAAAATAGACGTCTAACGTCAAGTTAATTGCAACTTTGTTCGGGTTCGGG
CTTGCTGTCGTACCAATGTAaccgattaaattaaaaagacaatttttttt
agaaaaccgttttttagaaaaccgttaaaaaatgttttaaaaacttggaa
aataatttttgataccAATGCATAAAATGgacaatttttttatatgatGA
CACGTACTCGTATGCTTgtatttatgttgttttttttttcgttcagtgTG
TTGTGTGATTGAGATGAAGACAATTTTTATCCTGTTTGTCTTTCGCAAGG
ACTCGCCTATCGGATATATCATAAAACCTGTGTGGTTTTGTAGAGTTCTA
TTTCGCACTTTATGTCGGCTGTTGAAAGatcataagaaaaatatttgacg
acaACCTATACATCATCCGTTTTTCGATTCTCGCCCTCCCTTGGGTTTGT
TATGATGTATCAAAGTTCGACCTCTCAAAATAAAGCTTTTCTTTCacctt
ttatttttgtattcgtaatttttgttaatatttttcccGAATTTTTTCAT
TACTGTATTTGTTTAAAATTGTCAGAGAatatttttgtactttttttccT
TCTATTGAAAGAAAATACACTATCCAGAATACAAA
Run BLAST on NCBI

transcript from alignment at sc0000007:439248..453578-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001121 ID=TCONS_00001121|Name=TCONS_00001121|organism=Clytia hemisphaerica|type=transcript|length=14331bp|location=Sequence derived from alignment at sc0000007:439248..453578- (Clytia hemisphaerica)
ATGATTGCCTTTTTAGTGTTGAACTTTTTTCAGGAAATGGCCTCATTAAA
AATTTGTGTATTTTTTTTCTTACAGTGGTAGCTAATAAGTCTTTTTTAAT
ACAATGAATTGAAACACATGGAGTTGAGAAGCTGTGGTATATCGTCAAGA
ATTAATTTTGATGCTCATGTTTAACTAATACTGAATCTCACGGCTTTGTG
TAGTTTCCATTGGATTTTGTTTTTTGTTGTTGGAAAGATATTTCAAAGAG
GTTTTAGATGAAGTTATGATGATGTTTGAGGTTTGTATATATCTTACACA
CTTATCTTTATCTGTCTACTCTTCTTAAATGGTTATATCAAAATTGACCA
TATGAAATTCTCCTTCGAAATAGAATTTAAGAGGCAGGCTTGAGACTGGC
CATTTATATTCATCGTTGCCGATGAGTATAATCCTTAATTGTAAGTCTTT
CCATAAATTCCCTCATTTGCCCTTATCCCTCCCCTTAACTTGTAAAGATT
AGATTTTCCTAGAGATTTGGATGTGTGTTCCTGGACATTTTGAGAGTACA
AAATGTTTATGCTGAATATTGGCTCTTTATAACTTATAACGTGTTTTGTG
TATACCACCTTCATTGTGAATGCCTGTTGTTACATCAAATAAAGTAATAA
GTATTAGAAATTGAAAAGAGCTCATATCCCTCCCCTCAAAGTGATATCCC
CTCTTGTTATTCCCCAAAAACTGTGCTTTAAAGCCTCCTTGATTTAAAGA
AGCTTTGTCGGTGTACTCTAATACGAAGCTTAATGTGGCTAGTTGTTATC
TGGGCATTATTGGATTGGTTTTCATTTTCTAAAATAATCCACCAAACTAT
CTCTATCCATTGATTACAGTACTAAGATTTCGGAATACGCCAATAATTTC
GGAATACGCTCTCCCGTGCTACCGCTTTCTTTGTATAGAAAATGTTGTAA
CGCTATGTGACTAGTAATTTTGTCTTCATAGCTAATTAATTATGTTTCGA
AATGCAAATTAAACTTCGACCATGAGTAGCCTAATTATTTAGATTGATTG
TATGTAATGGTCATATGCTATCTCAAAATAATGCCAAAATAAAAAAGAGG
GATTAATTGTCGAGCAAGTCAAGGATTTGATTTTTCCTTCATACATAAAA
TGAAATGCGAATTAGATTAGATCTTATCTTGATCAAATTAATTCATTCAT
CTTGTTGGTTATGCATTTAGTAAACCCACATTACGTAAGGGACCAAAAAT
AACCAGCCAATCATTTTGGTCCAAACCGTTGGATCAGTTCAAGGTTGAAT
ATTTTCTGCTTCGTTTTGTATCCTAATAGTCTGTCAAACCTTCGAGGATC
GCTGGTCAAGATTCGGTGCTTGCTGCATAATAGCTCGACATCTTTGTTGC
TCACATATTGCATAACCATTTAAGAGATTTGTATTTTGATGTCAAAGTCA
TTAGACAATGTAAATAGACACAAAGAGCACTTGAGATGTCGCCAAAAATG
ACATTTCGACATCTTTTCTGGTTTGAAATTGAAATGCTTCACAAAGTTTG
ATCTTGTTAGTCTTCATGTTAAGACTGTTAGCGATTTAATGCTCCTGGCG
ACTCTGTCTTATGCCAGTCTGACACTGAGGTCATTTCATATCTACCTCAT
CTCAAGTGTATCTCACGTTTAGAACTCGTTCCAGCTCATTATCCCTGTAA
TATAGTCAAAATTCGAAATCTCTATGGTCAGAGACTCGCTTTTTTTTAAA
GAATGGTGTTTTTTCATTTCATGATGGATATTCTTAACTTTTATGGGAAA
ATCATCCTAAAATATTCTTACAGCATTCTTAGGTTAGGATCCTAATTCAG
ACTAGATTCAACATTTAGTACATACGTCTCAACCATAAAATGGCATTTTG
TGAAAGGAGTGATCCTTAATACTTGGGGTCATTGGCAATTTGTAATTGAA
AATGCTCTAAAAATTGCATTCTTAGCTTAAGTAGCCAATTTCCATGATGG
TGATATTCTTAGCATTATTCTTAAATTTTTGGCCAATTTCATCATGAGCA
TTCTTATAAAGTATATTCTTATAAAAAAGGGTGTATCTTCAATTAATTAC
AATCTAATAGTCCACGAATTGAGGTTCCAAATATACTCAAAAGGCTTACT
GGCTAATATATATACTTAGGTTGCACCAAGCTTTACCGAATTCTGTGTAG
AAAGAAAAATTCTATGTTTACAAAGCGAAAAATGATTGGAAATCCTGATA
ATAGCGAATCAAAAATTAAATTCGTCTATTTCAAGAAAAACTGAACAATT
TTATCGAATTTGTGTTTCAGATAATTAGCGAGGTGATTAGTAATTTCCTA
ATGATCCCATGGGTCAATACAAACTGTTAAACTAATGATTTATGTATTGA
TCAAACACCCGGTTCGATCGAAATGACAAAACATCTTGTTCTCGATCTTT
TGTATCGCCTGTGTCCAAAGCAATTCCCTTCCAACTGGCTTAACCAGTGT
CACAATGATTAAGAACCAAACACATAGATTGTTTTGACACTATTCTTTGT
GGACAAGCAAGCGCTTTAGAATCGGTGACATGGACGTGTTGTATCCTTAT
TCCTTACTCTATGCAGCACCGTATCCAAACTTTCAGAAGCGAACTTTACA
ATGGATGGCGGTAAGCAANATGTATTGATCAAACACCCGGTTCGATCGAA
ATGACAAAACATCTTGTTCTCGATCTTTTGTATCGCCTGTGTCCAAAGCA
ATTCCCTTCCAACTGGCTTAACCAGTGTCACAATGATTAAGAAACAAACA
CTTAGATTGTTTTGACACTATTCTTGGTGGACAAGCAAGCGCTTTAGAAT
CGGTGACATGGACGTGTTGTATCCATATTCCTTACTCTATGCAGCACCTT
ATCCAAACTTTCAGAAGCGAACTTTACAATGGATGGCGGTAAGCAAAGGG
CATTTTAGAAGGTTTTATTTTCAAAGCATCTATATGTCTCATAGTAAAAA
AGGGCCCGATTTTGAATACCTTATCGGGGAAAAAATGTCGGGGAAAGTGA
CGAAAATTTTGAGGGGGTGACGAAACTTTTCCCCGATATTTTATCACCCG
ACCAAAGCTTTTACTCGATTTTTTTCCCCCAACCAAAATTCAAATCAACT
TTTGTACGCCTTTATTAACCGAAATTAATGCTTTAAACGTCGAATTAGAA
GACCTATTTTCGAGCTAGTGAAGGAAACCATTTCATTTGGACAATTTAGT
CGGGTGGAAGTGACGAAAATGCCTCTAGGTGACGAAATTTTTCCCCGACG
AAAAAAAAACCCGACAAAATAAAACTCCGACATTTTTTCCCTGATAAGAT
AATGCTCGTAAAAAGTATTCCCAAATTTAGGGGTACCTGATATGTTTGGG
GATACCTGATATGTTTGGGGATACCTGTAATTTCATAATTAGGGACGGGG
CCTGTTATTTTTTTATGAAATATTTTTCTTGACTGACCCTATTTCTCATT
TTTCAAGACTGTTTTTATAACCTAGTTTGGTCCAGTTTGGTCAGCTATAT
TTTTCGTAAAAAAATATATTTTTCCACCTTCTCATTAATGCTGATAAAGT
GGCAACAAGAGTGCTAGACAATTGGTTTGGTTTAATACTTCAGTGATGTT
AATTTAAAATTTTAACTTTGATCACGATATTTAAACATGGGTCCTTCACT
ATTTTGCCAAGAAAAAGTTAGCCAACCTAAACATTAAGGGCAATGTCAAT
TTATCAGAATATTCAGTACTCAAGCTAGGGCAGATATTAAATGCTGCAAA
TAATCATGAACATTTGCATGGTTGTGTGAAATTCTTGCCTGATTGATGAC
GTGGGCCTTCAACATGCCCCCATGCCAACATGATTTTGGGATTGATCCAA
AAACTGGTCCGAGCTTGCTCTGAACATGCGCTTGGGTCGTCTTAAAACCG
GGGGGATTTCATGAATGGCAAAAGAGCACAAAAATCCTTTATTATTATTT
CTAATGTTTTATAATAAAAAATGGGGTAACTCAAAGTCTGGGGGCTACTA
AAGAATTCTAAAAGATTTTGGGGGTACCAAAATATTAGGGATAACTAAAT
TTTTTGGGGGGTACCTGAACCCTTGAAGACCCTATGCCAGGCTCTAAATA
GATGGATAAAACTCACCTTAAGAAACAGGAAACTTCCAGCCATTCAATAA
ACTATGAACCAGCTTCTAATAGAGATCAGTCTAACTGAAGAAAATGAAGA
GAGAAAATACCTTAAGAAGGTCTGGCATTCCAGGTTTGGATTCATTGAAT
TCATACCACTGTAATGCAAACTATCCAGGACGCCATGAACAAAATAACTG
TTATTAGATAACGATAACAATCGTTTATTTTCTTTTTTGCTGTAGCGATC
AACTAGCCTCAGGCTTCCACGCAACCAGACCGCAGCCAACAACGTTTTCT
ACCAATCACAACGCAAGCAAAGAAAGACATCCTGTGTAACACCTGCGAGG
AGGAGAGGCTCCAAGGTATGTAGTCCTGGTATTGTTATTGTGTTCCTGGT
TTCTCAACATTCTAGTAAACTAAAGACAATGTACTATTTAAGGCACAGAA
ATGCTTGACGAAAATATAGCTAACTTCGAAACCTGGGGCGGAATCGTTCA
ATATTTGATTATTCTTATTATATTACGAACATAAATTATTAGGGTCTCAA
AATTAGACCCTTACGGTTGAGAAAATCTAGCTAAATTTGAGCAGATTTCA
GCAAATTGGTGCAAAAAATTTGAACATTTTGTCCATTTTTGTACGGTGGT
GAAATGACCTATTTTGCTTGAACCTTAACAAGTATTTTTATTATATGGTC
CCTTGGGATTTCAAACCCAGTTTTTGCCTACTTGGCAAAGCTGGGGAAAA
TTTTCTAGACTCTTATAAACAGTTATAAAGTCAACTTTTGAAGATCCTCA
TTGACAAAAACTAATTGTACCATCTGATAGAGCTTGGATAGCAGATCTCC
AAAAAGGAGATTTCATTTGTTTCATTTTGTTTCGACTAAGTCCCCCGAAA
ATGGATGATACGTCTCTTCAGAAATGCAAATTTTTATGTCAGTATTTTTG
AGAAAACTTTGACGAAAAAAATTACTTTCAGCAGACGAATCTCGAAAAGT
ACTTTCGATTATAGGTATAGTTTAAAGGGTTTCCATGGTTAGATCTTGAG
ATATTTGAGTTTGAAATTTTGCTAATTCAGCGTTTTTCCAGGTTTTTCAG
CATTTTTTTTGCATAGTAATTTTCCTCTTTTGACAAGAAAACTGTCATTT
CTGAGATGAAATAGGAGAGAGCTGTCATGGTCTGAGGAGCCCTCCTTGTC
TTTCAGTACCCACCCCCTAAAATCGGCTCCTGTAACCATGTTACTGGTCT
TATCCCCGTTTGTGTTGACTTAGCTCTTGGTTTTTATAGAATAGTCTGAT
CAACCATTTTATTCTCCCATTTTAGCTTTGGGTTGATTCGTTCGAATATG
ACGAGAGTGATGGATGGACTCCTCAACAAATCAAGCGACAAGAGGTATAT
ATTGTTTGCTTTCTTTATATGTTGATGCTTATTTGCTTCTTTAAAATTTG
GAAGGGGAGCTATTCCTCGCGATCCATTATTTAAACTGCACCAATCAGGA
TCAACTAAAAATTTCTTGGCACAACTAAACGTTACTCGCAAAACCACACG
AACTTTCGTGCAAAATAGTGTATTGTTGCCATTACATCTGAGGAGATGTG
AAAATTAGAGGCTTAGCACAAATGGGTACATTTTAAACGAATGTGGCAAT
AAATTGCACTTAATCGTGGTGCCCCTTGGCTAGACAATTCTCAAAATTTT
CAAAATTAAATCGTAATATTCGACATTTCCACAAATTTTATTCGTGAATC
CCAAAGGAATAACCCGAAGTATTGTGGTAAGGTGCAGCCTTCGGCTGATA
ATTTTGATGATTAATTTACAAATATAAAGGAATTCATCTAATAATTACAA
AACCTTCACTTATAAAACCTAACTCTTCATTGAAGATTGAAAACTCAGCC
TTCAACCGCTTCAGAGTTCGATCGGAAAATATTTGAACTCGATATCCTGT
TCTTTTGCAGGCAATCTACGAATTATATTGCGGAGAAACAGACATGGTGG
AAGACTTGAAACTGCTACAAGAGGTATAGGTTTTAAATAAATGATTTCTC
TTCCCAAAAAGAATTTATACGAGAAAATATGCTTCTCTCGTAGAAAGTAT
CGGACAAATTTCAACAAATAAATGTTTTAGTTGTCCCTTGAAACTACGGG
ATAACACCTTTTTATTCAAGCTGATTCTAGCGTCTGAAACAATTAGTGTC
TTTGAATAACTGATGTTGGGATATCGTATTGTGTTATGAACGAAGTAAAG
GTCGCATTCCGAATTAGCAGGGATTGTTTCTGATGACAGTTCATCTTGTT
CGGTGAAGCTGAAAAACTGGAATACGGGAGTCTATAAGATTTTCTTCTTC
TTAAAATAGCATGAATAGAATGGAATTTCCGTAAAAAAGATCATTTGATT
AAATTCGGATGATTCAATTTAAAACTCGCCATTATTTCGCTAGTCTTGGA
AATTCTTAAGATTTTGATTCTTTCTAAGTCATTGATGTTCTTGGTGATCT
CGTACCTTCTTGTACCCTTCCTGGTGTGAACAGGGCCTTAATAGATTCAC
GGAAACTTTTCATCAGAGCTATGAAGATGTATGGGTTGACAGCACTGTTC
GAAACAGACAACAAATATCGTGTGTGGTATAAATCGTACTTTAACTTGCA
ACTACATTGCTTGCAGTAATACATAACGTTCAAGAAAGCGAGTCCCGGAA
TATAAGAGATCATAAACACAGCTAGAATAATGAAAAATACGCGCGTTACT
CTCTTTTCCTTGATGTAACGCTGAGCGATTGTTTTACGGTTTGCTGTCAA
GGAATCTTCCAAGCGCTTCTTGAACTCTTCTTCGTTGCTTTTCATGAAGC
GATGGACTCCGAAATACACAAAGGCTATAACAAAAAATCCAATCGCGATT
GCACCATAATAAAAACCAGCAAAGCCATATCTACGGTTGCCGATGAACGT
TACCAAGCAACCGACACCGATGGACAAGACCCAAATAATGATGGATATGA
CAATACAACGAACCCAGGATAGCTTGATTCGATATTTCAATGGATGTGTG
ATTCCCACATAACGATCAATTGCTAACGCGCATGTGCTGAGAATCACACT
AGCCGCTGATGTTATGGTAGTGCTTTCTTCCAACGGGCTAAAAGTGATAT
TCAAACCTTTGAGGGAAGTGTACATGTAGTAAGCGGTTAGAGGCATGGGC
ACGGCACCTGCGATGAAGTCACATACTGATAGGTTGACCAAGAAATAATT
AAAGGGCGTGTGAAGCTTTTTCAAAGGATCGCATACCACTACAAGAATGA
TGAGAAAGTTGCCAACGATTGCCAGCACTGATAATGCGATGAATGAAATG
AAAAGTGCGATCGCTGCGTCTGAACCTGTGTCTGCATTTGAACAGTCGCT
TGTCATGGTATGGTATACTTCAGAGGTTTTTAGCGAACTGGAAGAAATTC
TCACTTTCTTCTCTTGTGATATGCATATTTTTTTAACTTTCTTAAAATCG
TGTCATGGTATGGGCTGTTTGTGTTTTTTCAGATCTCATGATGCTAGTCA
GTGTTTATTTAAGGATTTTTTGACAGCATGATGTAACTTGACAACAAGCG
TGTCCTATGAAGAGGCAATTCTGAATGAAAACCGCATTCAGCGAAATTCC
TGGATATCTCGAAGTTAGGAGAAGCCACTCGGTTGTTTGGGCGTATGGTT
GACAGGACCTGACAATTGTGGCAAACCTCTTGTCAGAAAAATGAAATATC
ATTGAAACGGTGATTTACCGAACAATGAATGATGAGATTTTTCTTTCTAT
GAAAGAAAACCCTAACGATCTGCATCGTGCAATTAAAAAACTGTCTGGTT
TAGTCCACCACAAGTTATTATTTAAAGGGGTACTTAATTTAGATGACGTC
ATTTGATCATTTTATATCTTGTAAACATTTTAATATTTTAATTCATGTAA
CGTTTTCCCCGGCGTCCCTGGTGTTTAATTTTATCGGCAGTGAGAGGGAG
GGTGGTGCTAGGTTTTAACACTTTGATATGACGAGTACTTTCGTGTTCTA
GGTTTTTCGGGTTTATTCCATTCAAATATAACGATACAATATTTTTTTGT
TTAGGTTTACTTCAATCCGGTGGCCAAATTAAAACTTTTGACGGAAGAAG
ACCTCGCCTCCATCTTCGGAAATATTCAAGTTTTGCTACCGTTACACGAG
GGTAAGACTCTTTTAATTTTTCAGCTTACAAACTCTTTAAAACGTAATTT
TGCTTTCGCAGGTTGCTCGAGGTCGTATTTGAGGAGTTTTACCAACATAG
CGGTCTCTACCACGTGATTGCATGTCGGATCTTTGTGAGCAGTTTGCCTC
CATTCTATGATTATTCATCTGTTGAATTCTTCAACATCATTTGCAGTTCT
TTTCATTGCTTCTTTTCGACTTCTTTTTGTCGGTGACAATGATGTCAAAG
TGATCAAGTCTTGTTGTATGCTTTACTTTCATTCAAACTTGCTCCGTAGT
CACAGAGCTTTCCAATGAATCGATTACGTTTTTGTTTTTGCTGTGTCATC
GTCAAAATAATCAAACAGAGAAACCAAAAAGAATCTGAAAAAGAGTCTTT
CCCACCGCGTCCGCAAAGATGAACAGTTTTGGTAAACTGATTCCATTTTA
AGAACACTAAATAGTTCAAACTTAATGTTAATATATCAAGACATTTACTT
TTGTACTGACACACTGAGTCTATGTATGCGTTCCCCAAATAATTGGAATG
TTCAAACGTGTTCGCCCTTCGTCTCTGTCTTGTTCTATAGAAATAGATTC
TCTTGTTAATCGCCAGCTTGTAACAGTGAGGCTTTTTGTAGCCTGTAATA
CGATACACTTATGTCACGCAGTCGTGGTGGTGAGCCGACTGAAAAAAGAA
CTTTCTCAATCTTTACTCCAAATGTTTTAAGCTTAATAGGGTGAAATATG
TAAACATGTAACGAGTGACGAGTTCATCTCAACCCGAGAGCTTTTTCTTT
TCGCTCGCTATGGGTCGTTTATTCATCATTCGCTGTCCCTCTTTTCGGTT
TTCTTTCAATAATATTCTCGCATACATAAGCTCTTATGAAAGTGTCAAAA
ATAACTTTATCAGATTCCACACATATCACCACCACTCAGCATTTCAACCG
CGGTTCCTTGACCACTATCATTCCTATCTTTTCATCAAAATATCATGTTT
ATTTATTTGGGTGTTTACCATTTTGATCACAAAGATCCATGCATTTTTCT
CTAGTGTATCATGAATTAAACGTATCATAAAGTCTCTCTCTTTGAAATGA
GTCATTTTTGCTGCTTTTTGACGAAATGTTTTCATAATATGGTCAAAGAA
AACAAGAAATGCAAAACCAACACCTTGCACTCACCGCCGTCACTTTCAAA
GTCAACAAATACTCACAAGTCACAACGACGACCCTTTGACGTCATCGTTC
AGCCTCAATGCCAAACATAGCAACAAATATCCAAACTCTATCTAATGCAA
GCATCATCTTTTGGCATTTGCCCAAATATCTCTATTCGTCATACTCCAAT
TTAGATACTTGATAAGTTTTTTTGGATAAAAATCTTTATAATTCTACCTA
ACATGTCTTTCCTTTCTTATCCACTGTTATTGACAATTTCGTCAAGAATT
CTTCACTCTGTATTGTTATAGATTTGGTGAAACGTTTGGAAGAAGTACGG
ACGGAGAACGGAAGCATCGAAGAGATCGGACGAATTTTGACGGAATGGAT
TCCCACGTTGCGCCCTTACATTCCGTATTGCGCCAATCAACTACAAATGA
AAAACATGCTCCTCCACAAGACCAAAGAAAATAAACACTTTTCAGATTTC
TTACAAGTAAGCATGACCTTTTTTCCTTCATTTTTCTTCTCCCGTTTTTT
TTCTTCTTTCTTTTCTCCCANCTTTTTCCTTCATTTTTTCTTCTCCCGTT
TTTTTTCTTCTTTCTTTTCTCCCAAAACTTTGACGACGACCTCAAATTGT
GTATTTATTTCAAAACCTGACCTTTTACGACATCAAGTATGAAAAAACGT
GCGGTTGATTCGTATTGTATAAGGTGTGGTTATTCAATAGACGTGGTTTT
GAAGGATAGCAAATAGAGATGGTTAGTGATAAGATAAGGGATAGGTAATC
ATATCTTGGTAGACCCTGATTAACAAATCATTCGTTGAAAATGTGATGTT
AAGCGCCAACGGATTATCGTACAATTGAATCAACAAGCCAACGTCTCTTT
TGATAATCCTATCTTTCCAACTGAATAAGCTTTATCAAAATGACTATTAG
ACTCATCTATGCTCCTATCATTACCCTAATCACCAGTTTTTCCTTCCCTT
TCTTCATAGAGATGTTTGGAATCGCCATTCAGCCGTAAACTAGACCTTTG
GTCTTTCTTAGGTAATCATTATATTACTCAAACCCACCTTTCGCCCAATC
ATCAAACAAATTTACACGCTTTTTTTTTATAAGAATGGTGTTTTTTCATT
TCATCATGGATATTCTTAACTTTTTGACGAAAATCATCCAAAAATATTCT
TACGGTATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAATTCCATGATGGTGATATTCTTACCATATTCTTAATTTT
TTGGCCATTTTCATCATGGACATTCTTATAAAGTGTATTCTTATAAAAAA
AAAAGCGTGTACTGTCTTTGCACTAGCCTTTTCATTGTAATTTGCTAAGT
ACTCATTTGACCTGTCTTCCTTTGCTTGACTTTCACGTTTCATAATCTCT
CTTCTCTCCTTTGTATTCATCAGATTCACCTAGAAGCAAACTGGTGAAAT
ATCCGCTACTTATCTCCAACATGCATAAATATGTAAGCTTTTTGTCACTT
TTTCTTTCTTTACGCTTATGGGAGATGACGCATCGTAAAATGACATGTAT
ATGTCTGATGTGTTTAGTGCCCAAGTGTCAATCCTCTTAACAATGCAAAA
AGTGCTTTTCATCATTACTTTTTAAACCTTCTTTTGTTTTGGTTTTGTTT
GTAGACGCCGAAAGAACATCCAGATAATATCATCTTATACCAAGCAGTAA
GTGATGTTTTGTCTAACAAATCATACATTTTACTACCCTGTCTCCCCTCT
GATAACAGCTGTTTATTTGTCCCTTTTTTGAAGCTGTAAAATTGATGTGT
TTTTTGGTGATGTATCCTTTCACTATCACATCATCAGTCTGTCATAGTGT
AAATATGATGACATGTGGAGTCCTTTATTGATAATAAACGGGAATCTCAG
GGGTTTCCACCGATTGAGCGTTTTCTCTACATTTCCTTCTTGTTTTCTTT
GCGCTGACTAAATTGGAAAAATAACGGCTCATAGTTTTGATATTCTAAAT
CTCTGACAAGAATCTCAATTATGTTGAAGTTCTATAAATAAGTTAAGACA
CCCCTTCTTCTCTTATATTTGGTTCGATTAAGGAGATTATTTCAAATTTT
TTTCTTCGTCAGATTCAAGAATTGGAGGTTATAATAAAAGAGGCAGATAA
AGCCACAGGAAAATCGAAGGTAAAGTTCCTCTTTATCTCTCACTGACCCT
TGTAAACAACTCAAACTACTTGAACCATGTGATTAAAACTCTCCACCGTT
TCTTACTTTTAGAGTTCATTCTACAAAGACCGCATGTATTTTCTGGACGA
AGGAGACCACAGAGAAGCATTATCTCAAGCACAAGTCCTTCTTTGTCACG
GTTCTCTCAAAAACAAGAATGGAGGGGTGAGTGGTTAATCCTCGTCCCTG
ACAACCTCTCTGTAATAAGTCAGATTTTTCAATCGATCTCTTGCTGTCCA
TGATGACTTATCACGCGTTATCAATTAGCTAATTAAGATATATCGAACAC
AAAATGAGAGCTAATTCTGAACCAATATATTTCTTTTTTCAGAAAATCGA
AGCGTTTCTCTTTGATACAGTATTTCTAATCACGCGGCCCGCTTCACGAA
ATGGTATGGAAATGTATCAAGTATTATCTCAGGTAATTTAGCATTCTCTT
TACACGCTTGATTTGCGATGTATTAGCACGAGATGATTGAATGGCGCCAT
CGCTTGTTTACTAGCCTGCACCAGTCCTTTATAAACATGTTTAGCCCCCA
AACTGTGCATTCTTTACAAGAGAATTTGATTGTAATGAGAATGATTGAGA
AGCATCTCTTTGAATGAACTGCTTGTACGCCAGTGAGAGATAAAAATCAC
CCATCTTTCTTTCACATTCTTGATGGTCTTTATGAAGAGAAATAAAGGTT
ATAATACTCTTCGAAGTTCATTCATGATTAACATTTATTTTCGTTGAAAA
GCTCACCCTTAATCTTTTTGAGCTCGGTAAGAAAGAAGTTGATTCGACTG
AAAATGTTATTCATTTCTAAGACGTCTTAGCTTGCTCTATACTAGCATCA
TTGTCCAGTGGCACGGTCTATTCAATCAAAATTCAAACCCTCTTTTGAGA
AGCTAATAATTTGTTAAGCTTGTTAAATCTCTCTATGATGCCTTCACCCA
AAATAATTCAAGCTTGTAATTTTGTACACAATCAAATTTGATGAAATTAC
TTGCTTTAAAAACTCAATTAACAACTCCACTTAATTTAACAAAATTTTGA
GCAGCTGGCTCGAAAACCTTTTTGTCAATTATATCCTAAATGCATTCCTT
TTTTCTTTGATCACTTTAGCCTCTACTCACGAATGACATGGAATATGCCA
ATGTCAGTGATGGTGAACTCAGGCTAGGTGGTTCATTTCGATCCAGTCTA
ACGAAGGGGCCGACAGGTAAGAAATGAAGTGCGGTTTTTGATGCCTTCTA
CCGGAAACTGTAACGGTCTTCTCAATATTTCCGGCGTATTTTTGTATTTT
TGTTGTTTGATTGACATTCGAAAACAAACGTCGTTACAGTGTTGAAAGTT
GAGGAGAAAATAATTATGAGATTAAAGTCGATCATTAATTCCTTGCAATC
TTCTACTCTAAGCATCGATTTAACGAAGGAAAAGGGGATTGATCTTGTGA
AAGATAATATATTTGCACTGCACTGATGTTGTTGGAAGGTTCAATCATTA
TTGACTCTTACTCTGTTTCAGCTAAATTTGCATTTCGTGTGAATCCAAAA
GAATTAACACGAGGTAAATCCATTATATTGCAAGCTAACGACCAACATGA
CAAAAAACAATGGTTGAACGCTCTAAGCAAAGTAGCCTCAATGCCAAGCA
AAGGTGATCCAAGCTAGATGAGTAGAGTTGAGAACAGGTGGTGAAATGTG
AGGGATGTCTTCGACAAGACAGTGATGATCTGCTCGATCAATTCGAGCGA
ATGGCACCCTAAAGGATGCGATCGATATCGATTCGTCGACACTGATGAAA
ATAGACGTCTAACGTCAAGTTAATTGCAACTTTGTTCGGGTTCGGGCTTG
CTGTCGTACCAATGTAACCGATTAAATTAAAAAGACAATTTTTTTTAGAA
AACCGTTTTTTAGAAAACCGTTAAAAAATGTTTTAAAAACTTGGAAAATA
ATTTTTGATACCAATGCATAAAATGGACAATTTTTTTATATGATGACACG
TACTCGTATGCTTGTATTTATGTTGTTTTTTTTTTCGTTCAGTGTGTTGT
GTGATTGAGATGAAGACAATTTTTATCCTGTTTGTCTTTCGCAAGGACTC
GCCTATCGGATATATCATAAAACCTGTGTGGTTTTGTAGAGTTCTATTTC
GCACTTTATGTCGGCTGTTGAAAGATCATAAGAAAAATATTTGACGACAA
CCTATACATCATCCGTTTTTCGATTCTCGCCCTCCCTTGGGTTTGTTATG
ATGTATCAAAGTTCGACCTCTCAAAATAAAGCTTTTCTTTCACCTTTTAT
TTTTGTATTCGTAATTTTTGTTAATATTTTTCCCGAATTTTTTCATTACT
GTATTTGTTTAAAATTGTCAGAGAATATTTTTGTACTTTTTTTCCTTCTA
TTGAAAGAAAATACACTATCCAGAATACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000629XLOC_000629Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001121-exon-sc0000007-1575043694:453299..453578TCONS_00001121-exon-sc0000007-1575043694:453299..453578Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:449064..449183TCONS_00001121-exon-sc0000007-1575043694:449064..449183Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:448035..448103TCONS_00001121-exon-sc0000007-1575043694:448035..448103Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:447406..447468TCONS_00001121-exon-sc0000007-1575043694:447406..447468Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:445228..445324TCONS_00001121-exon-sc0000007-1575043694:445228..445324Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:443573..443757TCONS_00001121-exon-sc0000007-1575043694:443573..443757Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:443018..443069TCONS_00001121-exon-sc0000007-1575043694:443018..443069Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:442397..442455TCONS_00001121-exon-sc0000007-1575043694:442397..442455Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:442183..442224TCONS_00001121-exon-sc0000007-1575043694:442183..442224Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:441710..441766TCONS_00001121-exon-sc0000007-1575043694:441710..441766Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:441503..441616TCONS_00001121-exon-sc0000007-1575043694:441503..441616Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:441247..441336TCONS_00001121-exon-sc0000007-1575043694:441247..441336Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:440463..440559TCONS_00001121-exon-sc0000007-1575043694:440463..440559Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:439248..440157TCONS_00001121-exon-sc0000007-1575043694:439248..440157Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:453299..453578TCONS_00001121-exon-sc0000007-1510915933:453299..453578Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:449064..449183TCONS_00001121-exon-sc0000007-1510915933:449064..449183Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:448035..448103TCONS_00001121-exon-sc0000007-1510915933:448035..448103Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:447406..447468TCONS_00001121-exon-sc0000007-1510915933:447406..447468Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:445228..445324TCONS_00001121-exon-sc0000007-1510915933:445228..445324Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:443573..443757TCONS_00001121-exon-sc0000007-1510915933:443573..443757Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:443018..443069TCONS_00001121-exon-sc0000007-1510915933:443018..443069Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:442397..442455TCONS_00001121-exon-sc0000007-1510915933:442397..442455Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:442183..442224TCONS_00001121-exon-sc0000007-1510915933:442183..442224Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:441710..441766TCONS_00001121-exon-sc0000007-1510915933:441710..441766Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:441503..441616TCONS_00001121-exon-sc0000007-1510915933:441503..441616Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:441247..441336TCONS_00001121-exon-sc0000007-1510915933:441247..441336Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:440463..440559TCONS_00001121-exon-sc0000007-1510915933:440463..440559Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:439248..440157TCONS_00001121-exon-sc0000007-1510915933:439248..440157Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:453299..453578TCONS_00001121-exon-sc0000007-1491911889:453299..453578Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:449064..449183TCONS_00001121-exon-sc0000007-1491911889:449064..449183Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:448035..448103TCONS_00001121-exon-sc0000007-1491911889:448035..448103Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:447406..447468TCONS_00001121-exon-sc0000007-1491911889:447406..447468Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:445228..445324TCONS_00001121-exon-sc0000007-1491911889:445228..445324Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:443573..443757TCONS_00001121-exon-sc0000007-1491911889:443573..443757Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:443018..443069TCONS_00001121-exon-sc0000007-1491911889:443018..443069Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:442397..442455TCONS_00001121-exon-sc0000007-1491911889:442397..442455Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:442183..442224TCONS_00001121-exon-sc0000007-1491911889:442183..442224Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:441710..441766TCONS_00001121-exon-sc0000007-1491911889:441710..441766Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:441503..441616TCONS_00001121-exon-sc0000007-1491911889:441503..441616Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:441247..441336TCONS_00001121-exon-sc0000007-1491911889:441247..441336Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:440463..440559TCONS_00001121-exon-sc0000007-1491911889:440463..440559Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:439248..440157TCONS_00001121-exon-sc0000007-1491911889:439248..440157Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:439248..453578 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.94194	4.06696	1.005	0.626674	45.8094	37.1144	25.4879	23.6122	16.6151	21.3252	11.0947	11.9767	11.635	8.96231	4.92709	5.79612	10.0418	8.88718	8.33978	11.8422	9.00826	7.75916	14.1502	8.81823	2.93274	9.02076	2.03257	1.25866	5.94648	7.09073
Blast
[Close]
BLAST of TCONS_00001121 vs. Swiss-Prot (Human)
Match: ARHG8 (Neuroepithelial cell-transforming gene 1 protein OS=Homo sapiens GN=NET1 PE=1 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.584e-105
Identity = 162/376 (43.09%), Postives = 245/376 (65.16%), Query Frame = 2 
Query:  341 SQRKQRKTSCVTPARRRGSKLWVDSFEYDESDGWTPQQIKRQEAIYELYCGETDMVEDLKLLQEVYFNPVAKLKLLTEEDLASIFGNIQVLLPLHEDLVKRLEEVRTENGSIEEIGRILTEWIPTLRPYIPYCANQLQMKNMLLHKTKENKHFSDFLQRCLESPFSRKLDLWSFLDSPRSKLVKYPLLISNMHKYTPKEHPDNIILYQAIQELEVIIKEADKATGKSKSSFYKDRMYFLDEGDHREALSQAQVLLCHGSLKNKNGGKIEAFLFDTVFLITRPASRNGMEMYQVLSQPLLTNDMEYANVSDGELRLGGSFRSSLTKGPTAKFAFRVNPKELTRGKSIILQANDQHDKKQWLNAL-SKVASMPSKGDP 1465
            +Q+   +++  TPA+RR S LW +  +    +  T ++I+RQEAIYE+  GE D++EDLKL ++ Y +P+ KL +++EE+L  IFG++   +PLHEDL+ R+ E    +G++E+IG IL  W+P L  Y  YC+NQL  K  LL + K++    DFLQRCLESPFSRKLDLWSFLD PRS+LVKYPLL+  + K+TPKEHPD  +L  AI  ++ ++ + +   G+S+  +Y D++ +LDE      +  ++VLLCHG L++K+G K+  FLF  + ++TRP +RN    YQV  QP+   ++   ++ DG++R+GGSFR + +    AK  FR+   + +  +S  LQAND   K+QW N + + +A   S G P
Sbjct:  135 AQKFSSRSTVPTPAKRRSSALWSEMLDITMKESLTTREIRRQEAIYEMSRGEQDLIEDLKLARKAYHDPMLKLSIMSEEELTHIFGDLDSYIPLHEDLLTRIGEATKPDGTVEQIGHILVSWLPRLNAYRGYCSNQLAAK-ALLDQKKQDPRVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLKEILKHTPKEHPDVQLLEDAILIIQGVLSDINLKKGESECQYYIDKLEYLDEKQRDPRIEASKVLLCHGELRSKSGHKLYIFLFQDILVLTRPVTRNERHSYQVYRQPIPVQELVLEDLQDGDVRMGGSFRGAFSNSEKAKNIFRIRFHDPSPAQSHTLQANDVFHKQQWFNCIRAAIAPFQSAGSP 509
The following BLAST results are available for this feature:
BLAST of TCONS_00001121 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARHG82.584e-10543.09Neuroepithelial cell-transforming gene 1 protein O... [more]
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