TCONS_00001120 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001120
Unique NameTCONS_00001120
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2839

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001120 ID=TCONS_00001120|Name=TCONS_00001120|organism=Clytia hemisphaerica|type=transcript|length=2839bp
AATAAGTCTTTTTTAATACAATGAATTGAAACACATGGAGTTGAGAAGCT
GTGGTATATCGTCAAGAATTAATTTTGATGCTCATGTTTAACTAATACTG
AATCTCACGGCTTTGTGTAGTTTCCATtggattttgttttttgttgttgg
aaagatatttcaaagAGGTTTTAGATGAAGTTATGATGATGTTTGAGCGA
TCAACTAGCCTCAGGCTTCCACGCAACCAGACCGCAGCCAACAACGTTTT
CTACCAATCACAACGCAAGCAAAGAAAGACATCCTGTGTAACACCTGCGA
GGAGGAGAGGCTCCAAGCTTTGGGTTGATTCGTTCGAATATGACGAGAGT
GATGGATGGACTCCTCAACAAATCAAGCGACAAGAGGCAATCTACGAATT
ATATTGCGGAGAAACAGACATGGTGGAAGACTTGAAACTGCTACAAGAGg
tTTACTTCAATCCGGTGgccaaattaaaacttttgacGGAAGAAGACCTC
GCCTCCATCTTCGGAAATATTCAAGTTTTGCTACCGTTACACGAGGATTT
GGTGAAACGTTTGGAAGAAGTACGGACGGAGAACGGAAGCATCGAAGAGA
TCGGACGAATTTTGACGGAATGGATTCCCACGTTGCGCCCTTACATTCCG
TATTGCGCCAATCAACTACAAATGAAAAACATGCTCCTCCACAAGAccaa
agaaaataaacacttttcAGATTTCTTACAAAGATGTTTGGAATCGCCAT
TCAGCCGTAAACTAGACCTTTGGTCTTTCTTAGATTCACCTAGAAGCAAA
CTGGTGAAATATCCGCTACTTATCTCCAACATGCATAAATATACGCCGAA
AGAACATCCAGATAATATCATCTTATACCAAGCAATTCAAGAATTGGAGG
TTATAATAAAAGAGGCAGATAAAGCCACAGGAAAATCGAAGAGTTCATTC
TACAAAGACCGCATGTATTTTCTGGACGAAGGAGACCACAGAGAAGCATT
ATCTCAAGCACAAGTCCTTCTTTGTCACGGTTCTCTCAAAAACAAGAATG
GAGGGaaaatcgaaGCGTTTCTCTTTGATACAGTATTTCTAATCACGCGG
CCCGCTTCACGAAATGGTATGGAAATGTATCAAGTATTATCTCAGGTAAT
TTAGCATTCTCTTTACACGCTTGATTTGCGATGTATTAGCACGAGATGAT
TGAATGGCGCCATCGCTTGTTTACTAGCCTGCACCAGTCCTTTATAAACA
TGTTTAGCCCCCAAACTGTGCATTCTTTACAAGAGAATTTGATTGTAATG
AGAATGATTGAGAAGCATCTCTTTGAATGAACTGCTTGTACGCCAGTGAG
AGATAAAAATCACCCATCTTTCTTTCACATTCTTGATGGTCTTTATGAAG
AGAAATAAAGGTTATAATACTCTTCGAAGTTCATTCATGATTAACATTTA
TTTTCGTTGAAAAGCTCACCCTTAATCTTTTTGAGCTCGGTAAGAAAGAA
GTTGATTCGACTGAAAATGTTATTCATTTCTAAGACGTCTTAGCTTGCTC
TATACTAGCATCATTGTCCAGTGGCACGGTCTattcaatcaaaattcaaa
ccCTCTTTTGAGAAGCTAATAATTTGTTAAGCTTGTTAAATCTCTCTATG
ATGCCTTCACCCAAAATAATTCAAGCTTGTAATTTTGTAcacaatcaaat
ttgatgaaattacTTGCTTTAAAAACTCAATTAACAACTCCACttaattt
aacaaaattttgaGCAGCTGGCTCGAAAACCTTTTTGTCAATTATATCCT
AAATGCATTCCTTTTTTCTTTGATCACTTTAGCCTCTACTCACGAATGAC
ATGGAATATGCCAATGTCAGTGATGGTGAACTCAGGCTAGGTGGTTCATT
TCGATCCAGTCTAACGAAGGGGCCGACAGCTAAATTTGCATTTCGTGTGA
ATCCAAAAGAATTAACACGAGGTAAATCCATTATATTGCAAGCTAACGAC
CAACATGACAAAAAACAATGGTTGAACGCTCTAAGCAAAGTAGCCTCAAT
GCCAAGCAAAGGTGATCCAAGCTAGATGAGTAGAGTTGAGAACAGGTGGT
GAAATGTGAGGGATGTCTTCGACAAGACAGTGATGATCTGCTCGATCAAT
TCGAGCGAATGGCACCCTAAAGGATGCGATCGATATCGATTCGTCGACAC
TGATGAAAATAGACGTCTAACGTCAAGTTAATTGCAACTTTGTTCGGGTT
CGGGCTTGCTGTCGTACCAATGTAaccgattaaattaaaaagacaatttt
ttttagaaaaccgttttttagaaaaccgttaaaaaatgttttaaaaactt
ggaaaataatttttgataccAATGCATAAAATGgacaatttttttatatg
atGACACGTACTCGTATGCTTgtatttatgttgttttttttttcgttcag
tgTGTTGTGTGATTGAGATGAAGACAATTTTTATCCTGTTTGTCTTTCGC
AAGGACTCGCCTATCGGATATATCATAAAACCTGTGTGGTTTTGTAGAGT
TCTATTTCGCACTTTATGTCGGCTGTTGAAAGatcataagaaaaatattt
gacgacaACCTATACATCATCCGTTTTTCGATTCTCGCCCTCCCTTGGGT
TTGTTATGATGTATCAAAGTTCGACCTCTCAAAATAAAGCTTTTCTTTCa
ccttttatttttgtattcgtaatttttgttaatatttttcccGAATTTTT
TCATTACTGTATTTGTTTAAAATTGTCAGAGAatatttttgtactttttt
tccTTCTATTGAAAGAAAATACACTATCCAGAATACAAA
Run BLAST on NCBI

transcript from alignment at sc0000007:439248..453495-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001120 ID=TCONS_00001120|Name=TCONS_00001120|organism=Clytia hemisphaerica|type=transcript|length=14248bp|location=Sequence derived from alignment at sc0000007:439248..453495- (Clytia hemisphaerica)
AATAAGTCTTTTTTAATACAATGAATTGAAACACATGGAGTTGAGAAGCT
GTGGTATATCGTCAAGAATTAATTTTGATGCTCATGTTTAACTAATACTG
AATCTCACGGCTTTGTGTAGTTTCCATTGGATTTTGTTTTTTGTTGTTGG
AAAGATATTTCAAAGAGGTTTTAGATGAAGTTATGATGATGTTTGAGGTT
TGTATATATCTTACACACTTATCTTTATCTGTCTACTCTTCTTAAATGGT
TATATCAAAATTGACCATATGAAATTCTCCTTCGAAATAGAATTTAAGAG
GCAGGCTTGAGACTGGCCATTTATATTCATCGTTGCCGATGAGTATAATC
CTTAATTGTAAGTCTTTCCATAAATTCCCTCATTTGCCCTTATCCCTCCC
CTTAACTTGTAAAGATTAGATTTTCCTAGAGATTTGGATGTGTGTTCCTG
GACATTTTGAGAGTACAAAATGTTTATGCTGAATATTGGCTCTTTATAAC
TTATAACGTGTTTTGTGTATACCACCTTCATTGTGAATGCCTGTTGTTAC
ATCAAATAAAGTAATAAGTATTAGAAATTGAAAAGAGCTCATATCCCTCC
CCTCAAAGTGATATCCCCTCTTGTTATTCCCCAAAAACTGTGCTTTAAAG
CCTCCTTGATTTAAAGAAGCTTTGTCGGTGTACTCTAATACGAAGCTTAA
TGTGGCTAGTTGTTATCTGGGCATTATTGGATTGGTTTTCATTTTCTAAA
ATAATCCACCAAACTATCTCTATCCATTGATTACAGTACTAAGATTTCGG
AATACGCCAATAATTTCGGAATACGCTCTCCCGTGCTACCGCTTTCTTTG
TATAGAAAATGTTGTAACGCTATGTGACTAGTAATTTTGTCTTCATAGCT
AATTAATTATGTTTCGAAATGCAAATTAAACTTCGACCATGAGTAGCCTA
ATTATTTAGATTGATTGTATGTAATGGTCATATGCTATCTCAAAATAATG
CCAAAATAAAAAAGAGGGATTAATTGTCGAGCAAGTCAAGGATTTGATTT
TTCCTTCATACATAAAATGAAATGCGAATTAGATTAGATCTTATCTTGAT
CAAATTAATTCATTCATCTTGTTGGTTATGCATTTAGTAAACCCACATTA
CGTAAGGGACCAAAAATAACCAGCCAATCATTTTGGTCCAAACCGTTGGA
TCAGTTCAAGGTTGAATATTTTCTGCTTCGTTTTGTATCCTAATAGTCTG
TCAAACCTTCGAGGATCGCTGGTCAAGATTCGGTGCTTGCTGCATAATAG
CTCGACATCTTTGTTGCTCACATATTGCATAACCATTTAAGAGATTTGTA
TTTTGATGTCAAAGTCATTAGACAATGTAAATAGACACAAAGAGCACTTG
AGATGTCGCCAAAAATGACATTTCGACATCTTTTCTGGTTTGAAATTGAA
ATGCTTCACAAAGTTTGATCTTGTTAGTCTTCATGTTAAGACTGTTAGCG
ATTTAATGCTCCTGGCGACTCTGTCTTATGCCAGTCTGACACTGAGGTCA
TTTCATATCTACCTCATCTCAAGTGTATCTCACGTTTAGAACTCGTTCCA
GCTCATTATCCCTGTAATATAGTCAAAATTCGAAATCTCTATGGTCAGAG
ACTCGCTTTTTTTTAAAGAATGGTGTTTTTTCATTTCATGATGGATATTC
TTAACTTTTATGGGAAAATCATCCTAAAATATTCTTACAGCATTCTTAGG
TTAGGATCCTAATTCAGACTAGATTCAACATTTAGTACATACGTCTCAAC
CATAAAATGGCATTTTGTGAAAGGAGTGATCCTTAATACTTGGGGTCATT
GGCAATTTGTAATTGAAAATGCTCTAAAAATTGCATTCTTAGCTTAAGTA
GCCAATTTCCATGATGGTGATATTCTTAGCATTATTCTTAAATTTTTGGC
CAATTTCATCATGAGCATTCTTATAAAGTATATTCTTATAAAAAAGGGTG
TATCTTCAATTAATTACAATCTAATAGTCCACGAATTGAGGTTCCAAATA
TACTCAAAAGGCTTACTGGCTAATATATATACTTAGGTTGCACCAAGCTT
TACCGAATTCTGTGTAGAAAGAAAAATTCTATGTTTACAAAGCGAAAAAT
GATTGGAAATCCTGATAATAGCGAATCAAAAATTAAATTCGTCTATTTCA
AGAAAAACTGAACAATTTTATCGAATTTGTGTTTCAGATAATTAGCGAGG
TGATTAGTAATTTCCTAATGATCCCATGGGTCAATACAAACTGTTAAACT
AATGATTTATGTATTGATCAAACACCCGGTTCGATCGAAATGACAAAACA
TCTTGTTCTCGATCTTTTGTATCGCCTGTGTCCAAAGCAATTCCCTTCCA
ACTGGCTTAACCAGTGTCACAATGATTAAGAACCAAACACATAGATTGTT
TTGACACTATTCTTTGTGGACAAGCAAGCGCTTTAGAATCGGTGACATGG
ACGTGTTGTATCCTTATTCCTTACTCTATGCAGCACCGTATCCAAACTTT
CAGAAGCGAACTTTACAATGGATGGCGGTAAGCAANATGTATTGATCAAA
CACCCGGTTCGATCGAAATGACAAAACATCTTGTTCTCGATCTTTTGTAT
CGCCTGTGTCCAAAGCAATTCCCTTCCAACTGGCTTAACCAGTGTCACAA
TGATTAAGAAACAAACACTTAGATTGTTTTGACACTATTCTTGGTGGACA
AGCAAGCGCTTTAGAATCGGTGACATGGACGTGTTGTATCCATATTCCTT
ACTCTATGCAGCACCTTATCCAAACTTTCAGAAGCGAACTTTACAATGGA
TGGCGGTAAGCAAAGGGCATTTTAGAAGGTTTTATTTTCAAAGCATCTAT
ATGTCTCATAGTAAAAAAGGGCCCGATTTTGAATACCTTATCGGGGAAAA
AATGTCGGGGAAAGTGACGAAAATTTTGAGGGGGTGACGAAACTTTTCCC
CGATATTTTATCACCCGACCAAAGCTTTTACTCGATTTTTTTCCCCCAAC
CAAAATTCAAATCAACTTTTGTACGCCTTTATTAACCGAAATTAATGCTT
TAAACGTCGAATTAGAAGACCTATTTTCGAGCTAGTGAAGGAAACCATTT
CATTTGGACAATTTAGTCGGGTGGAAGTGACGAAAATGCCTCTAGGTGAC
GAAATTTTTCCCCGACGAAAAAAAAACCCGACAAAATAAAACTCCGACAT
TTTTTCCCTGATAAGATAATGCTCGTAAAAAGTATTCCCAAATTTAGGGG
TACCTGATATGTTTGGGGATACCTGATATGTTTGGGGATACCTGTAATTT
CATAATTAGGGACGGGGCCTGTTATTTTTTTATGAAATATTTTTCTTGAC
TGACCCTATTTCTCATTTTTCAAGACTGTTTTTATAACCTAGTTTGGTCC
AGTTTGGTCAGCTATATTTTTCGTAAAAAAATATATTTTTCCACCTTCTC
ATTAATGCTGATAAAGTGGCAACAAGAGTGCTAGACAATTGGTTTGGTTT
AATACTTCAGTGATGTTAATTTAAAATTTTAACTTTGATCACGATATTTA
AACATGGGTCCTTCACTATTTTGCCAAGAAAAAGTTAGCCAACCTAAACA
TTAAGGGCAATGTCAATTTATCAGAATATTCAGTACTCAAGCTAGGGCAG
ATATTAAATGCTGCAAATAATCATGAACATTTGCATGGTTGTGTGAAATT
CTTGCCTGATTGATGACGTGGGCCTTCAACATGCCCCCATGCCAACATGA
TTTTGGGATTGATCCAAAAACTGGTCCGAGCTTGCTCTGAACATGCGCTT
GGGTCGTCTTAAAACCGGGGGGATTTCATGAATGGCAAAAGAGCACAAAA
ATCCTTTATTATTATTTCTAATGTTTTATAATAAAAAATGGGGTAACTCA
AAGTCTGGGGGCTACTAAAGAATTCTAAAAGATTTTGGGGGTACCAAAAT
ATTAGGGATAACTAAATTTTTTGGGGGGTACCTGAACCCTTGAAGACCCT
ATGCCAGGCTCTAAATAGATGGATAAAACTCACCTTAAGAAACAGGAAAC
TTCCAGCCATTCAATAAACTATGAACCAGCTTCTAATAGAGATCAGTCTA
ACTGAAGAAAATGAAGAGAGAAAATACCTTAAGAAGGTCTGGCATTCCAG
GTTTGGATTCATTGAATTCATACCACTGTAATGCAAACTATCCAGGACGC
CATGAACAAAATAACTGTTATTAGATAACGATAACAATCGTTTATTTTCT
TTTTTGCTGTAGCGATCAACTAGCCTCAGGCTTCCACGCAACCAGACCGC
AGCCAACAACGTTTTCTACCAATCACAACGCAAGCAAAGAAAGACATCCT
GTGTAACACCTGCGAGGAGGAGAGGCTCCAAGGTATGTAGTCCTGGTATT
GTTATTGTGTTCCTGGTTTCTCAACATTCTAGTAAACTAAAGACAATGTA
CTATTTAAGGCACAGAAATGCTTGACGAAAATATAGCTAACTTCGAAACC
TGGGGCGGAATCGTTCAATATTTGATTATTCTTATTATATTACGAACATA
AATTATTAGGGTCTCAAAATTAGACCCTTACGGTTGAGAAAATCTAGCTA
AATTTGAGCAGATTTCAGCAAATTGGTGCAAAAAATTTGAACATTTTGTC
CATTTTTGTACGGTGGTGAAATGACCTATTTTGCTTGAACCTTAACAAGT
ATTTTTATTATATGGTCCCTTGGGATTTCAAACCCAGTTTTTGCCTACTT
GGCAAAGCTGGGGAAAATTTTCTAGACTCTTATAAACAGTTATAAAGTCA
ACTTTTGAAGATCCTCATTGACAAAAACTAATTGTACCATCTGATAGAGC
TTGGATAGCAGATCTCCAAAAAGGAGATTTCATTTGTTTCATTTTGTTTC
GACTAAGTCCCCCGAAAATGGATGATACGTCTCTTCAGAAATGCAAATTT
TTATGTCAGTATTTTTGAGAAAACTTTGACGAAAAAAATTACTTTCAGCA
GACGAATCTCGAAAAGTACTTTCGATTATAGGTATAGTTTAAAGGGTTTC
CATGGTTAGATCTTGAGATATTTGAGTTTGAAATTTTGCTAATTCAGCGT
TTTTCCAGGTTTTTCAGCATTTTTTTTGCATAGTAATTTTCCTCTTTTGA
CAAGAAAACTGTCATTTCTGAGATGAAATAGGAGAGAGCTGTCATGGTCT
GAGGAGCCCTCCTTGTCTTTCAGTACCCACCCCCTAAAATCGGCTCCTGT
AACCATGTTACTGGTCTTATCCCCGTTTGTGTTGACTTAGCTCTTGGTTT
TTATAGAATAGTCTGATCAACCATTTTATTCTCCCATTTTAGCTTTGGGT
TGATTCGTTCGAATATGACGAGAGTGATGGATGGACTCCTCAACAAATCA
AGCGACAAGAGGTATATATTGTTTGCTTTCTTTATATGTTGATGCTTATT
TGCTTCTTTAAAATTTGGAAGGGGAGCTATTCCTCGCGATCCATTATTTA
AACTGCACCAATCAGGATCAACTAAAAATTTCTTGGCACAACTAAACGTT
ACTCGCAAAACCACACGAACTTTCGTGCAAAATAGTGTATTGTTGCCATT
ACATCTGAGGAGATGTGAAAATTAGAGGCTTAGCACAAATGGGTACATTT
TAAACGAATGTGGCAATAAATTGCACTTAATCGTGGTGCCCCTTGGCTAG
ACAATTCTCAAAATTTTCAAAATTAAATCGTAATATTCGACATTTCCACA
AATTTTATTCGTGAATCCCAAAGGAATAACCCGAAGTATTGTGGTAAGGT
GCAGCCTTCGGCTGATAATTTTGATGATTAATTTACAAATATAAAGGAAT
TCATCTAATAATTACAAAACCTTCACTTATAAAACCTAACTCTTCATTGA
AGATTGAAAACTCAGCCTTCAACCGCTTCAGAGTTCGATCGGAAAATATT
TGAACTCGATATCCTGTTCTTTTGCAGGCAATCTACGAATTATATTGCGG
AGAAACAGACATGGTGGAAGACTTGAAACTGCTACAAGAGGTATAGGTTT
TAAATAAATGATTTCTCTTCCCAAAAAGAATTTATACGAGAAAATATGCT
TCTCTCGTAGAAAGTATCGGACAAATTTCAACAAATAAATGTTTTAGTTG
TCCCTTGAAACTACGGGATAACACCTTTTTATTCAAGCTGATTCTAGCGT
CTGAAACAATTAGTGTCTTTGAATAACTGATGTTGGGATATCGTATTGTG
TTATGAACGAAGTAAAGGTCGCATTCCGAATTAGCAGGGATTGTTTCTGA
TGACAGTTCATCTTGTTCGGTGAAGCTGAAAAACTGGAATACGGGAGTCT
ATAAGATTTTCTTCTTCTTAAAATAGCATGAATAGAATGGAATTTCCGTA
AAAAAGATCATTTGATTAAATTCGGATGATTCAATTTAAAACTCGCCATT
ATTTCGCTAGTCTTGGAAATTCTTAAGATTTTGATTCTTTCTAAGTCATT
GATGTTCTTGGTGATCTCGTACCTTCTTGTACCCTTCCTGGTGTGAACAG
GGCCTTAATAGATTCACGGAAACTTTTCATCAGAGCTATGAAGATGTATG
GGTTGACAGCACTGTTCGAAACAGACAACAAATATCGTGTGTGGTATAAA
TCGTACTTTAACTTGCAACTACATTGCTTGCAGTAATACATAACGTTCAA
GAAAGCGAGTCCCGGAATATAAGAGATCATAAACACAGCTAGAATAATGA
AAAATACGCGCGTTACTCTCTTTTCCTTGATGTAACGCTGAGCGATTGTT
TTACGGTTTGCTGTCAAGGAATCTTCCAAGCGCTTCTTGAACTCTTCTTC
GTTGCTTTTCATGAAGCGATGGACTCCGAAATACACAAAGGCTATAACAA
AAAATCCAATCGCGATTGCACCATAATAAAAACCAGCAAAGCCATATCTA
CGGTTGCCGATGAACGTTACCAAGCAACCGACACCGATGGACAAGACCCA
AATAATGATGGATATGACAATACAACGAACCCAGGATAGCTTGATTCGAT
ATTTCAATGGATGTGTGATTCCCACATAACGATCAATTGCTAACGCGCAT
GTGCTGAGAATCACACTAGCCGCTGATGTTATGGTAGTGCTTTCTTCCAA
CGGGCTAAAAGTGATATTCAAACCTTTGAGGGAAGTGTACATGTAGTAAG
CGGTTAGAGGCATGGGCACGGCACCTGCGATGAAGTCACATACTGATAGG
TTGACCAAGAAATAATTAAAGGGCGTGTGAAGCTTTTTCAAAGGATCGCA
TACCACTACAAGAATGATGAGAAAGTTGCCAACGATTGCCAGCACTGATA
ATGCGATGAATGAAATGAAAAGTGCGATCGCTGCGTCTGAACCTGTGTCT
GCATTTGAACAGTCGCTTGTCATGGTATGGTATACTTCAGAGGTTTTTAG
CGAACTGGAAGAAATTCTCACTTTCTTCTCTTGTGATATGCATATTTTTT
TAACTTTCTTAAAATCGTGTCATGGTATGGGCTGTTTGTGTTTTTTCAGA
TCTCATGATGCTAGTCAGTGTTTATTTAAGGATTTTTTGACAGCATGATG
TAACTTGACAACAAGCGTGTCCTATGAAGAGGCAATTCTGAATGAAAACC
GCATTCAGCGAAATTCCTGGATATCTCGAAGTTAGGAGAAGCCACTCGGT
TGTTTGGGCGTATGGTTGACAGGACCTGACAATTGTGGCAAACCTCTTGT
CAGAAAAATGAAATATCATTGAAACGGTGATTTACCGAACAATGAATGAT
GAGATTTTTCTTTCTATGAAAGAAAACCCTAACGATCTGCATCGTGCAAT
TAAAAAACTGTCTGGTTTAGTCCACCACAAGTTATTATTTAAAGGGGTAC
TTAATTTAGATGACGTCATTTGATCATTTTATATCTTGTAAACATTTTAA
TATTTTAATTCATGTAACGTTTTCCCCGGCGTCCCTGGTGTTTAATTTTA
TCGGCAGTGAGAGGGAGGGTGGTGCTAGGTTTTAACACTTTGATATGACG
AGTACTTTCGTGTTCTAGGTTTTTCGGGTTTATTCCATTCAAATATAACG
ATACAATATTTTTTTGTTTAGGTTTACTTCAATCCGGTGGCCAAATTAAA
ACTTTTGACGGAAGAAGACCTCGCCTCCATCTTCGGAAATATTCAAGTTT
TGCTACCGTTACACGAGGGTAAGACTCTTTTAATTTTTCAGCTTACAAAC
TCTTTAAAACGTAATTTTGCTTTCGCAGGTTGCTCGAGGTCGTATTTGAG
GAGTTTTACCAACATAGCGGTCTCTACCACGTGATTGCATGTCGGATCTT
TGTGAGCAGTTTGCCTCCATTCTATGATTATTCATCTGTTGAATTCTTCA
ACATCATTTGCAGTTCTTTTCATTGCTTCTTTTCGACTTCTTTTTGTCGG
TGACAATGATGTCAAAGTGATCAAGTCTTGTTGTATGCTTTACTTTCATT
CAAACTTGCTCCGTAGTCACAGAGCTTTCCAATGAATCGATTACGTTTTT
GTTTTTGCTGTGTCATCGTCAAAATAATCAAACAGAGAAACCAAAAAGAA
TCTGAAAAAGAGTCTTTCCCACCGCGTCCGCAAAGATGAACAGTTTTGGT
AAACTGATTCCATTTTAAGAACACTAAATAGTTCAAACTTAATGTTAATA
TATCAAGACATTTACTTTTGTACTGACACACTGAGTCTATGTATGCGTTC
CCCAAATAATTGGAATGTTCAAACGTGTTCGCCCTTCGTCTCTGTCTTGT
TCTATAGAAATAGATTCTCTTGTTAATCGCCAGCTTGTAACAGTGAGGCT
TTTTGTAGCCTGTAATACGATACACTTATGTCACGCAGTCGTGGTGGTGA
GCCGACTGAAAAAAGAACTTTCTCAATCTTTACTCCAAATGTTTTAAGCT
TAATAGGGTGAAATATGTAAACATGTAACGAGTGACGAGTTCATCTCAAC
CCGAGAGCTTTTTCTTTTCGCTCGCTATGGGTCGTTTATTCATCATTCGC
TGTCCCTCTTTTCGGTTTTCTTTCAATAATATTCTCGCATACATAAGCTC
TTATGAAAGTGTCAAAAATAACTTTATCAGATTCCACACATATCACCACC
ACTCAGCATTTCAACCGCGGTTCCTTGACCACTATCATTCCTATCTTTTC
ATCAAAATATCATGTTTATTTATTTGGGTGTTTACCATTTTGATCACAAA
GATCCATGCATTTTTCTCTAGTGTATCATGAATTAAACGTATCATAAAGT
CTCTCTCTTTGAAATGAGTCATTTTTGCTGCTTTTTGACGAAATGTTTTC
ATAATATGGTCAAAGAAAACAAGAAATGCAAAACCAACACCTTGCACTCA
CCGCCGTCACTTTCAAAGTCAACAAATACTCACAAGTCACAACGACGACC
CTTTGACGTCATCGTTCAGCCTCAATGCCAAACATAGCAACAAATATCCA
AACTCTATCTAATGCAAGCATCATCTTTTGGCATTTGCCCAAATATCTCT
ATTCGTCATACTCCAATTTAGATACTTGATAAGTTTTTTTGGATAAAAAT
CTTTATAATTCTACCTAACATGTCTTTCCTTTCTTATCCACTGTTATTGA
CAATTTCGTCAAGAATTCTTCACTCTGTATTGTTATAGATTTGGTGAAAC
GTTTGGAAGAAGTACGGACGGAGAACGGAAGCATCGAAGAGATCGGACGA
ATTTTGACGGAATGGATTCCCACGTTGCGCCCTTACATTCCGTATTGCGC
CAATCAACTACAAATGAAAAACATGCTCCTCCACAAGACCAAAGAAAATA
AACACTTTTCAGATTTCTTACAAGTAAGCATGACCTTTTTTCCTTCATTT
TTCTTCTCCCGTTTTTTTTCTTCTTTCTTTTCTCCCANCTTTTTCCTTCA
TTTTTTCTTCTCCCGTTTTTTTTCTTCTTTCTTTTCTCCCAAAACTTTGA
CGACGACCTCAAATTGTGTATTTATTTCAAAACCTGACCTTTTACGACAT
CAAGTATGAAAAAACGTGCGGTTGATTCGTATTGTATAAGGTGTGGTTAT
TCAATAGACGTGGTTTTGAAGGATAGCAAATAGAGATGGTTAGTGATAAG
ATAAGGGATAGGTAATCATATCTTGGTAGACCCTGATTAACAAATCATTC
GTTGAAAATGTGATGTTAAGCGCCAACGGATTATCGTACAATTGAATCAA
CAAGCCAACGTCTCTTTTGATAATCCTATCTTTCCAACTGAATAAGCTTT
ATCAAAATGACTATTAGACTCATCTATGCTCCTATCATTACCCTAATCAC
CAGTTTTTCCTTCCCTTTCTTCATAGAGATGTTTGGAATCGCCATTCAGC
CGTAAACTAGACCTTTGGTCTTTCTTAGGTAATCATTATATTACTCAAAC
CCACCTTTCGCCCAATCATCAAACAAATTTACACGCTTTTTTTTTATAAG
AATGGTGTTTTTTCATTTCATCATGGATATTCTTAACTTTTTGACGAAAA
TCATCCAAAAATATTCTTACGGTATTCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAATTCCATGATGGTGATATTCTT
ACCATATTCTTAATTTTTTGGCCATTTTCATCATGGACATTCTTATAAAG
TGTATTCTTATAAAAAAAAAAGCGTGTACTGTCTTTGCACTAGCCTTTTC
ATTGTAATTTGCTAAGTACTCATTTGACCTGTCTTCCTTTGCTTGACTTT
CACGTTTCATAATCTCTCTTCTCTCCTTTGTATTCATCAGATTCACCTAG
AAGCAAACTGGTGAAATATCCGCTACTTATCTCCAACATGCATAAATATG
TAAGCTTTTTGTCACTTTTTCTTTCTTTACGCTTATGGGAGATGACGCAT
CGTAAAATGACATGTATATGTCTGATGTGTTTAGTGCCCAAGTGTCAATC
CTCTTAACAATGCAAAAAGTGCTTTTCATCATTACTTTTTAAACCTTCTT
TTGTTTTGGTTTTGTTTGTAGACGCCGAAAGAACATCCAGATAATATCAT
CTTATACCAAGCAGTAAGTGATGTTTTGTCTAACAAATCATACATTTTAC
TACCCTGTCTCCCCTCTGATAACAGCTGTTTATTTGTCCCTTTTTTGAAG
CTGTAAAATTGATGTGTTTTTTGGTGATGTATCCTTTCACTATCACATCA
TCAGTCTGTCATAGTGTAAATATGATGACATGTGGAGTCCTTTATTGATA
ATAAACGGGAATCTCAGGGGTTTCCACCGATTGAGCGTTTTCTCTACATT
TCCTTCTTGTTTTCTTTGCGCTGACTAAATTGGAAAAATAACGGCTCATA
GTTTTGATATTCTAAATCTCTGACAAGAATCTCAATTATGTTGAAGTTCT
ATAAATAAGTTAAGACACCCCTTCTTCTCTTATATTTGGTTCGATTAAGG
AGATTATTTCAAATTTTTTTCTTCGTCAGATTCAAGAATTGGAGGTTATA
ATAAAAGAGGCAGATAAAGCCACAGGAAAATCGAAGGTAAAGTTCCTCTT
TATCTCTCACTGACCCTTGTAAACAACTCAAACTACTTGAACCATGTGAT
TAAAACTCTCCACCGTTTCTTACTTTTAGAGTTCATTCTACAAAGACCGC
ATGTATTTTCTGGACGAAGGAGACCACAGAGAAGCATTATCTCAAGCACA
AGTCCTTCTTTGTCACGGTTCTCTCAAAAACAAGAATGGAGGGGTGAGTG
GTTAATCCTCGTCCCTGACAACCTCTCTGTAATAAGTCAGATTTTTCAAT
CGATCTCTTGCTGTCCATGATGACTTATCACGCGTTATCAATTAGCTAAT
TAAGATATATCGAACACAAAATGAGAGCTAATTCTGAACCAATATATTTC
TTTTTTCAGAAAATCGAAGCGTTTCTCTTTGATACAGTATTTCTAATCAC
GCGGCCCGCTTCACGAAATGGTATGGAAATGTATCAAGTATTATCTCAGG
TAATTTAGCATTCTCTTTACACGCTTGATTTGCGATGTATTAGCACGAGA
TGATTGAATGGCGCCATCGCTTGTTTACTAGCCTGCACCAGTCCTTTATA
AACATGTTTAGCCCCCAAACTGTGCATTCTTTACAAGAGAATTTGATTGT
AATGAGAATGATTGAGAAGCATCTCTTTGAATGAACTGCTTGTACGCCAG
TGAGAGATAAAAATCACCCATCTTTCTTTCACATTCTTGATGGTCTTTAT
GAAGAGAAATAAAGGTTATAATACTCTTCGAAGTTCATTCATGATTAACA
TTTATTTTCGTTGAAAAGCTCACCCTTAATCTTTTTGAGCTCGGTAAGAA
AGAAGTTGATTCGACTGAAAATGTTATTCATTTCTAAGACGTCTTAGCTT
GCTCTATACTAGCATCATTGTCCAGTGGCACGGTCTATTCAATCAAAATT
CAAACCCTCTTTTGAGAAGCTAATAATTTGTTAAGCTTGTTAAATCTCTC
TATGATGCCTTCACCCAAAATAATTCAAGCTTGTAATTTTGTACACAATC
AAATTTGATGAAATTACTTGCTTTAAAAACTCAATTAACAACTCCACTTA
ATTTAACAAAATTTTGAGCAGCTGGCTCGAAAACCTTTTTGTCAATTATA
TCCTAAATGCATTCCTTTTTTCTTTGATCACTTTAGCCTCTACTCACGAA
TGACATGGAATATGCCAATGTCAGTGATGGTGAACTCAGGCTAGGTGGTT
CATTTCGATCCAGTCTAACGAAGGGGCCGACAGGTAAGAAATGAAGTGCG
GTTTTTGATGCCTTCTACCGGAAACTGTAACGGTCTTCTCAATATTTCCG
GCGTATTTTTGTATTTTTGTTGTTTGATTGACATTCGAAAACAAACGTCG
TTACAGTGTTGAAAGTTGAGGAGAAAATAATTATGAGATTAAAGTCGATC
ATTAATTCCTTGCAATCTTCTACTCTAAGCATCGATTTAACGAAGGAAAA
GGGGATTGATCTTGTGAAAGATAATATATTTGCACTGCACTGATGTTGTT
GGAAGGTTCAATCATTATTGACTCTTACTCTGTTTCAGCTAAATTTGCAT
TTCGTGTGAATCCAAAAGAATTAACACGAGGTAAATCCATTATATTGCAA
GCTAACGACCAACATGACAAAAAACAATGGTTGAACGCTCTAAGCAAAGT
AGCCTCAATGCCAAGCAAAGGTGATCCAAGCTAGATGAGTAGAGTTGAGA
ACAGGTGGTGAAATGTGAGGGATGTCTTCGACAAGACAGTGATGATCTGC
TCGATCAATTCGAGCGAATGGCACCCTAAAGGATGCGATCGATATCGATT
CGTCGACACTGATGAAAATAGACGTCTAACGTCAAGTTAATTGCAACTTT
GTTCGGGTTCGGGCTTGCTGTCGTACCAATGTAACCGATTAAATTAAAAA
GACAATTTTTTTTAGAAAACCGTTTTTTAGAAAACCGTTAAAAAATGTTT
TAAAAACTTGGAAAATAATTTTTGATACCAATGCATAAAATGGACAATTT
TTTTATATGATGACACGTACTCGTATGCTTGTATTTATGTTGTTTTTTTT
TTCGTTCAGTGTGTTGTGTGATTGAGATGAAGACAATTTTTATCCTGTTT
GTCTTTCGCAAGGACTCGCCTATCGGATATATCATAAAACCTGTGTGGTT
TTGTAGAGTTCTATTTCGCACTTTATGTCGGCTGTTGAAAGATCATAAGA
AAAATATTTGACGACAACCTATACATCATCCGTTTTTCGATTCTCGCCCT
CCCTTGGGTTTGTTATGATGTATCAAAGTTCGACCTCTCAAAATAAAGCT
TTTCTTTCACCTTTTATTTTTGTATTCGTAATTTTTGTTAATATTTTTCC
CGAATTTTTTCATTACTGTATTTGTTTAAAATTGTCAGAGAATATTTTTG
TACTTTTTTTCCTTCTATTGAAAGAAAATACACTATCCAGAATACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000629XLOC_000629Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001120-exon-sc0000007-1575043694:453299..453495TCONS_00001120-exon-sc0000007-1575043694:453299..453495Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:449064..449183TCONS_00001120-exon-sc0000007-1575043694:449064..449183Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:448035..448103TCONS_00001120-exon-sc0000007-1575043694:448035..448103Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:447406..447468TCONS_00001120-exon-sc0000007-1575043694:447406..447468Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:445228..445324TCONS_00001120-exon-sc0000007-1575043694:445228..445324Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:443573..443757TCONS_00001120-exon-sc0000007-1575043694:443573..443757Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:443018..443069TCONS_00001120-exon-sc0000007-1575043694:443018..443069Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:442397..442455TCONS_00001120-exon-sc0000007-1575043694:442397..442455Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:442183..442224TCONS_00001120-exon-sc0000007-1575043694:442183..442224Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:441710..441766TCONS_00001120-exon-sc0000007-1575043694:441710..441766Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:441503..441616TCONS_00001120-exon-sc0000007-1575043694:441503..441616Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:440463..441336TCONS_00001120-exon-sc0000007-1575043694:440463..441336Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:439248..440157TCONS_00001120-exon-sc0000007-1575043694:439248..440157Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:453299..453495TCONS_00001120-exon-sc0000007-1510915933:453299..453495Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:449064..449183TCONS_00001120-exon-sc0000007-1510915933:449064..449183Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:448035..448103TCONS_00001120-exon-sc0000007-1510915933:448035..448103Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:447406..447468TCONS_00001120-exon-sc0000007-1510915933:447406..447468Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:445228..445324TCONS_00001120-exon-sc0000007-1510915933:445228..445324Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:443573..443757TCONS_00001120-exon-sc0000007-1510915933:443573..443757Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:443018..443069TCONS_00001120-exon-sc0000007-1510915933:443018..443069Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:442397..442455TCONS_00001120-exon-sc0000007-1510915933:442397..442455Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:442183..442224TCONS_00001120-exon-sc0000007-1510915933:442183..442224Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:441710..441766TCONS_00001120-exon-sc0000007-1510915933:441710..441766Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:441503..441616TCONS_00001120-exon-sc0000007-1510915933:441503..441616Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:440463..441336TCONS_00001120-exon-sc0000007-1510915933:440463..441336Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:439248..440157TCONS_00001120-exon-sc0000007-1510915933:439248..440157Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:453299..453495TCONS_00001120-exon-sc0000007-1491911889:453299..453495Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:449064..449183TCONS_00001120-exon-sc0000007-1491911889:449064..449183Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:448035..448103TCONS_00001120-exon-sc0000007-1491911889:448035..448103Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:447406..447468TCONS_00001120-exon-sc0000007-1491911889:447406..447468Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:445228..445324TCONS_00001120-exon-sc0000007-1491911889:445228..445324Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:443573..443757TCONS_00001120-exon-sc0000007-1491911889:443573..443757Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:443018..443069TCONS_00001120-exon-sc0000007-1491911889:443018..443069Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:442397..442455TCONS_00001120-exon-sc0000007-1491911889:442397..442455Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:442183..442224TCONS_00001120-exon-sc0000007-1491911889:442183..442224Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:441710..441766TCONS_00001120-exon-sc0000007-1491911889:441710..441766Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:441503..441616TCONS_00001120-exon-sc0000007-1491911889:441503..441616Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:440463..441336TCONS_00001120-exon-sc0000007-1491911889:440463..441336Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:439248..440157TCONS_00001120-exon-sc0000007-1491911889:439248..440157Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:439248..453495 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000448476	0.191524	0	0.107432	0.924553	0.617723	0.660898	0.817121	0.652312	0.727081	0.424003	1.15315	0.262262	0.34544	0.499162	0.11375	0.620444	0.231524	0.37071	0.49285	0	9.92277e-05	0.0211428	0.134044	0	0.050382	0	0.0827523	0.013937	0.0932845
Blast
[Close]
BLAST of TCONS_00001120 vs. Swiss-Prot (Human)
Match: ARHG8 (Neuroepithelial cell-transforming gene 1 protein OS=Homo sapiens GN=NET1 PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 2.356e-84
Identity = 136/298 (45.64%), Postives = 201/298 (67.45%), Query Frame = 3 
Query:  258 SQRKQRKTSCVTPARRRGSKLWVDSFEYDESDGWTPQQIKRQEAIYELYCGETDMVEDLKLLQEVYFNPVAKLKLLTEEDLASIFGNIQVLLPLHEDLVKRLEEVRTENGSIEEIGRILTEWIPTLRPYIPYCANQLQMKNMLLHKTKENKHFSDFLQRCLESPFSRKLDLWSFLDSPRSKLVKYPLLISNMHKYTPKEHPDNIILYQAIQELEVIIKEADKATGKSKSSFYKDRMYFLDEGDHREALSQAQVLLCHGSLKNKNGGKIEAFLFDTVFLITRPASRNGMEMYQVLSQVI 1151
            +Q+   +++  TPA+RR S LW +  +    +  T ++I+RQEAIYE+  GE D++EDLKL ++ Y +P+ KL +++EE+L  IFG++   +PLHEDL+ R+ E    +G++E+IG IL  W+P L  Y  YC+NQL  K  LL + K++    DFLQRCLESPFSRKLDLWSFLD PRS+LVKYPLL+  + K+TPKEHPD  +L  AI  ++ ++ + +   G+S+  +Y D++ +LDE      +  ++VLLCHG L++K+G K+  FLF  + ++TRP +RN    YQV  Q I
Sbjct:  135 AQKFSSRSTVPTPAKRRSSALWSEMLDITMKESLTTREIRRQEAIYEMSRGEQDLIEDLKLARKAYHDPMLKLSIMSEEELTHIFGDLDSYIPLHEDLLTRIGEATKPDGTVEQIGHILVSWLPRLNAYRGYCSNQLAAK-ALLDQKKQDPRVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLKEILKHTPKEHPDVQLLEDAILIIQGVLSDINLKKGESECQYYIDKLEYLDEKQRDPRIEASKVLLCHGELRSKSGHKLYIFLFQDILVLTRPVTRNERHSYQVYRQPI 431
The following BLAST results are available for this feature:
BLAST of TCONS_00001120 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARHG82.356e-8445.64Neuroepithelial cell-transforming gene 1 protein O... [more]
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