MSTRG.10252.1.p2 (mRNA) -

Overview
NameMSTRG.10252.1.p2
Unique NameMSTRG.10252.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000071_pilon:90067..97987-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10252.1.p2 ID=MSTRG.10252.1.p2|Name=MSTRG.10252.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7921bp|location=Sequence derived from alignment at sc0000071_pilon:90067..97987- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAATTAAACAAAGCAAGGAAATAAAACCACTTCAGCCTTATGTGCGA
AAAATCGAAAGATATTCAAAAACTGCCATCCTGACGTTTAAAAAACTTCA
TATCTGAAAAAAAAATTGAAATTGAAATCAAATAAGACACGTCCTTCGTA
GAATGCAGCCGAGAGATTTGGCGGTGAAAGATGACGATGAAAATGCTTAC
ATTTTTGGTAATTTTAGCATTGTTATGTAAACACATGTGGGCGACAACCG
AAGAAAGTCGTTTCGTTAAAGTCAAAGAGAAAGCCGCGTTGGAAGGTCTG
GTACCGAACCATCAACATAATGTGTCCAGTACTACAGAATGTCTGCTGAT
TGGACAACAATGGGAATCGTACTTGATTCAAACAACAGACCAAAACAATG
GAATCCTATGTTCGCTCTTTCTTCATTATACGGAAGATACTGTCTCCAAA
ATGAGGCCAGATAATAGAAGCGAGGTTTACCAGCTCGACACAAAGGTCGA
GAAAGATTGTTTGGCTTGGCATCGCCATGGTTACGTGAAAAGTGGTATCT
ACCGCATCGGCATCGAAGGAAGCCCTGTGTTGCAGGTTTCTTGTGATATG
GAGAACCATGGCGGTGGTTGGATCGTGTTCCAAAGGCGGTTTGACGGCTC
CGTCGATTTCAATCAAGATTGGGAAACGTATAAGAGAGGTTTCGGGAATT
TGGAAGGAGTTTTTTGGTTGGGGAATGATTTGATTCATTTGTTGAGCACC
AGGTCACCTAAGACAGAGCTTCTATTGTATGGGAAAGGGTTCGATGGGAT
GGAAGTGTACGCTCAGTTTTTAGGGTTTGCAGTGGGTGATGAGGGAACTG
GGTACAAGTTGACATCAGGTGTAGCGATTGCAGGGAGAGCACATGCGGCA
TGGCTGTCTCACAATGGAATGCGGTTCTCTACTCGTGATGTTGATAACGA
TGCAAAGAGTTCTGGAAAATGTTCCGAAGGTGATTCTACTTATTTCCATT
CTGGGTTTGTTTTGAAAATATTTTCCTGAGGTTTTGTGTTTATAGGTTAA
GGGAACCCTAACTGGCGCTTCGATAATTTATCTTCAGAACTTTCTTTAAA
ATTGCCAAACATAGATAGACCAGGAAAAAGGGGACAAGCTGGAGTTTTTA
CAAGCTCTTATTTGATTTGGTTGGTCGTTAAGATGTAATAAAAGAATCTT
ATAACTTTTTCTAAAAACGCGTCATCTCTATCACTTTAAATGACCAATTA
GTGAAGTATCTTGTAAAAACTCCAGCTCATCCCGGAAAAAGAAGCTTTTT
CTCAAGTCCTTGGTAAAGATCCGACATTGAGTTATTGTGACCGAATGTTT
CCATTGAGTTTAAGCCGTTGAGTTTAAGCTCCAAAGGGGCTAGAGATGAA
TCTTCATCCTTTATCAGGCAATAAAAATGGAGCTTGGGATTTGCATCGCA
ATTAGAATGACGGATCAAATCTAGCATTTTCTTTGTTTTCACGGGGTATT
TTTCGAAATCTGGCGATATGTTCTACTTTCAATTCAGCGTTTGTTTGAAA
AATACGCGGGTCACGAGTTTAGGATGGGAAATAAGTGGCTTCATTTCCCA
CCCAGGAGTCTCGAGTCTAGCACTTTGGGCTTAGAAGTTAGTGAAAACTC
CACCTTTAGACTATGGTCGTTATGTTGGATTATAGTCTTCAACTATGGCT
ATAATATTTGACAAAAATGGAATTTCCCTAAAAAATTTCAAAAACAGCAA
GTAGTTCTTAAGTGCCTTAACTTAGAGTTAGAAAGTAGAATTTTAACTCT
GAGTTTTTACATGAGACTTAAGATATAGTATAGGATCCAAAAGCTTGCAA
ATAGTCCAACTAGGCGGGAGAATATAGCCTGGAAGCTATTATACCCCTCC
CAAATTGAAATGTCTTATTAGCTAAAGAAGAAAGCCTGAAAATGTCATTC
TCGCCCGAACTTTAAATTCAGCAAAACGCTAAAATACCAAGAAATGCCAA
CATATTCTGACTACAATTGTACTTTTATAATTCGAAGAAACTTCTTGGTC
CTTTGAAGGTTGAATTAGAGAGAATCAGCTATTTATGACCTAAACTAATC
AGCTATTGTCATTACCGAATACTTTCAAAATAACCATATCTCTATCTTTC
ATTACCCAGGTAACGGATGGTGGCTAAAAAATTGTTGGCAGATCAGTTTG
AACGGAATATACGGACAACGTTGGTTGGCTTGGAAAGGAATCCATTGGTT
GGGATTTAAAGGTTGGGGCGAAAGTTTACAACAAACCCAAATGATGATGA
GATGAATATGAAATGTTTTCCTGACACTCATTTATTAGAGAATTTATGTT
TTTGCACTTTTGAGGACGGTGTAGTGGCTAAAGCGATTTGGAATAACCCG
CAGTTTCGACCCGCAAAAGAGAGGACGGTAAAAAGTTCTGATTTACCGTC
GTCCTCAGTCGATCAGGATCTAGACAAATCAGAAGCTAACCGTCTCCAGC
ACAGAAAAACAGACACAGAAACTCGCTATTTCTTGGAAGTTTGATTAAAG
AATCATTGAAGTCCATTTGCACACTGATTTTTGTTTGTACATCGTTGAAA
AGATAATTCAGGAGTCCATTTTATTATTTATGTTAATTATGTCATTATAG
AGATCCAGAATTTTTGAGAACATTAAATCCTATCAAAGAAACTTATCAAA
GTTGTTTGATACTTCAGTAAAAAGTTACTTAGAAGCCTCACTGATTTTAG
CTTTATGATTATTCTTTCCCATAAAATTATTGCATCCAAAGATGTAGATT
TTTATACTGTGAGAGATGTAAAACTCTAGAGATTTTGAATGGTTTTATTT
CCAGTGTTTCATTGTCGGTTTTTATTTCTTTTTCAAGAAAAACTTTCGAA
AACGAAATCAAATCCTTTACAATATTAATTTGGCCTCTTGCTGAGCTGAC
TATGGACAGATGATTGTAAATTGAAAGACTAACACTAAATAACTCTTAGA
GATTTTATTGTATATAGTATTGATTAAAATTATTTGACAAAATACATGCG
TTGAATTTTCTTGTCTTTACCAAGCATGGTTGATATTTTGTAAAAGAACG
TTGTTAAGTTACGGGGAAGTTGACTAAACTAATAAGATTATAAACAAGAC
AAAAATTGAACACGTGAGAAGTTGATAGAAGGACTATCTTATTCGTGGAA
CGATGATTTTGTCAAGAAAGGAAGCTCGCATTTGCTTCTTCTTTCTTCTG
AGTTTTGCTCAAAAAGTTACCACATCTTTTTGTTTGGGTGGTTGCTATCG
TTACCTGCAAAATGGAACGTGTCACATTGGAAACGAAGCAACCGTGTCTA
GCCTGTACGCGTTGCTTGACAATCAACAACAACGAAGAAAAGATTTCGTC
AATTCCCTCAAAAGCTCAATGGTAAATTTTTTCATTAGGTGCCTATACAG
TGTTGTCTCCATAACTCGAACACGCACGGGAACACAAATTTGTTAGGGTT
CATTATATGATTTGAAATATATTATACGTTAGTTCAGAATGGGTTTGAGA
ATAATAGAGTCTGAGTAATTGAGAGAATGTTGACTTCGGATTGCATGTAA
AAAAAATCTGGGTGAAGTATTACATATTATTTCAATACATTTGGAAACAT
TTGGAAACAACATGGTCAAACGATAATGGACGTTTAAAGAACTACACAGG
AAGTATAAAAGTCTACGAATCTGACTATTTTTTTGGAATACAGGATAAAA
GCGTGAGTATGAGATTTGCAGCAGAGGTTTCCACAAGAGCTTCTTTAAAA
TGTGTAAACCATCTTATGATAGCTCTATGTTTGATTTAAGGTTCCGTGTT
TAAAAACACAACTGTGATTAAGAAAGAGTTTAACTTACTATAAAGAAGCG
CGTATAGAAGAAAAAGTTGAAAATCGGGTTGGGCTTCATACTGATGGAAA
TTCAGCAGATGTGTGAAAAAAGGTCGTCGCCTCTGCAGGGCGTTAAAACA
ATAGCTTTTGCACCAATATAATGAAAAGACTCAACCTGCCATCTGTCATA
CCACCGTAGCCCGCCCACCCTCACTACTTTGTCAAGAAAAAACTCCGGGT
TATTTTTCCATAAATTTCCATAAATTCTTCTCAAATTGACTCGAAATAAG
TCCTAAACAAGGACTTTCAACCCATAGAAACTAACTATTACACACCAACA
CACGAATAACTTATGAAAATAAAACTACGATTACTGACTAGAAAACCTTT
TTTCATTTTTTTAGGAAATTACCTGTCCGGAAAATATTTCAGAAATGAGT
GTCCGGATCCATACCAAACTCATCGTTGAAATGACAAAACTGTTTCAAGC
AGACAAAATCGTACTTCTGATCGATATTGGATACAAATACCACATTTTAC
TATCCCAAACACAGTCCAGCCTGGAACAAAGCTTATTTGATAAAGTGATT
GAAGTGCACAGTCTAGATTTGACTAATTATCATACATTACCACGAAAAAT
CATTGGCGAGATAAAAAATGAAAGTAAACACGTGAATCGTTTGAACATCC
TGTTAACGTCCACAGAAATCACACATACTTTATTGGAGGCGCGTGTAAAA
TACGTCTTAGCAGAAAAGCAAGACTTCTGGTTGATTCCTGAAGAAAATAT
TGTGACAGCAGAATACACTCCACAGCGAACTTTCACTTTCTCTCCACTTG
AATGTGTTTGTTCTCCAAAGAAACAATCGTAAGTGCTTTTCCAGTTTCGG
GGAAGGAAAAAATCCGTTTTCATTAAAATCAATGAGTTTTGACTCAACCT
TCCTACTTTTTCTGAAAGATTAGGCCAGGCTTATATCAGCTGATGTAGAT
AATCTTTTTACTTGGAAGAGTCTTAACAAATCTATTTTCTTCGTTATTTC
TGGTATCTGCTTGTTCTTAAATTGTTCGTAAGTTTTGGTTGAGTTAGCCT
CGTAGTCTTATATATCAAATCTACAAAGTTTTTAAAAGGATTCCTCATCA
CTGACACGAAGAAAGATTAGTGAATTGTCCTGGTGTAACAAAAACGAATC
AAGAAACCCAAATTATTTTGTAGGAATCAACCACTGTCTTATATAAAAAA
GGTCACACCTCAAGGAAGAACATCTATTTACATAGCGTTCCTCTCGGAGA
ACGAGACACTGTGCATCGATGCGACCACATTCTCCAAGAAGCGACCGCTC
GTTCCCGTGGCGACGACAATAATGGAGCCTTTTCTTTTCACTCGAATGGA
AGAACATACTGAAAACGAAGTTAAAGATGTCAAGCGGAAAATGGAATGTC
GAATGTCGCGTGATTCAAATGGACCAATCAAGTCACATGATCTACGAGGA
CCAATTAAAACAGAGAAAACATTATACTGTTTCGGATACATCGTTGATTT
GTTGATGAAAATTTCAGAAGAATTGTTAATCGATTTTGACCTGTACATAA
CTGACAGCATCGGTTATTACGCTTCAGGAAATGTTTCGCGGTCGAACGTG
TCCACCTCTTCCGGGGTCTTAGGAGAGCTGGCATCAGGTAATGCATTGAT
GGGAGCTGGACCAATCACGATCACCAAAAGACGTTTGAACCAGGTCGACT
TCACAACCCCATTCCTGGTGGATGATATCAACATCATCACTTTGAACGAA
ATCGCCAAGACAGATAAGAAATCTGAATTCAACATGTTCAGTAATTTGAG
CCACGCAACACAGCTATCTATCCTCGCGTTCTGGATCGCATCCATCATTG
TGGTGTACGTGGCGGAAAACGCGCTACAACTAGTTAAACGCGTCAGTACT
GACGACCGTAAGTATATCGGAATCCGCATGATCAATTACGTTTTCAAGGA
TTGTATTTTGTACATCACAGGGTTGGTCATGCAACGAGACATGGGCGCTA
AGAACCCAGGGACATTCGGTGGACGTGTGATCTCCATCTTGTTTGCGTTT
GGTATGGTTTGTATCACGACTATGTATACAGCTTCGTTGACGTATCAGCA
AGTTGTCCATGGAGGGTTCAATGATTTCAAAGGTTTACAGGATAAGAGGG
TAAGGAAGTAATGAATTATCAAAATAACGGGTTGTTTATTTTTGTGTAAA
GCATTAATCCAACTTCTGCTTCAGTTAAACGGGTAAAATTACTTAAATAA
ATATTTTGTGAACAATGGAAGATTTAGTTGGTCATGACGTTTTGACGAAT
TCTGACGTTTTCTTTCCAGTAGTGAGGTCTTACAATTCTTATAAGATTCT
CATAAATGAGAAAACTCTTTTTCGGAAAAACCACGTTTAAGATATTTTTC
ATCTAATTCGATCAAAGATTCAACACCCAACAACCGACTTCAAACTTGCC
ACACAGAGTAAAGCTTTCCTATCTGACGTCTTTGATGCTTCCACAGATCC
TGTATTGAAACGTTTGGACAAATTCATGGAGAATTATAATACGCGACATT
TGAACTCTGGAGTACAGGCTATCATCGATAAGTATGACACTACCTTTATA
GTCAGGCTAGTCAAAAGTTTCATGTCCGCACATTTTTGATAGTTCACCTT
TTTGACTTTCGGAATTTAGAGAGCGTCTTGAGAAAATGTGTTAAAAGTGA
AAGAGTATACTACTTCAGTGCTCATTCGATAATTTTCACTTCATTTTTCA
TCTAATATCTCCTCTAAAATGTACATTTGGTGTCTATTTACAGAGAGATC
CACGCGTATTTCATGGAGAGCTCGTTTGCAAAATATTATCGAGCGACCAT
TGGCCAGTGTAAAATCATGGTACATCACACAAACCTCCCATCTTCATATT
ACGGTTTCGTCCTTCCCAAAGGGTCACCACTCACCGAAGAGATCTCTCAA
GTCATCATACAAATGCACGAAAACGAAGAGCTATTACATTTACACAGCCG
CTGGCTCCGCCACGAATGTCCCACCACTTATTGGAAAAGCACTGAGAAGC
TCACAATCTTGTTTTTCAAGAAATTATTCGTCGTTCTTTGTATAGCAACC
GGGTTAGCAATCATCGTGCTCGGTGGAGAAATGGTCTACTCCAAGTTGGC
TCAAACACATGATTTGCAGTGTATGTATCGACATAGCGCATTGCAAGGTA
TGTTGGAAGAGAATGAGGTACTGAGAAGATGGTTGATTCCTTTTGAGATG
GAGGAAGATGAGACTTTGGAAGAGATTGAAGAAAACGAGGAAGAACAGGA
TATCGAATTCGCTGCTAAACGATGGCGGAAAGTCTCCGTACAACATCGAT
GTGCTAAAGATGAAATGGCGGATGTTGAGGGCGTTTCTCGTGGGCGTGAC
AACTCGATTGACGGAGCCGTTTCTGAGAGTAAAGGCTTGGTTGAGAGGGA
GAGTAGTTCTCAGAGTATTTACGTTGGAGAGAATCATGACCATGCACATG
CAAACTCTGAGAGAGAGGGCGCTTCTGTAGGGCGTGGAAGTTCAGATGAG
GCGGATGACGACAACAGTCTGGATGAGGAAAGTTCGGGATTCCTTCAACG
AAATCAAATGGGAGGAAAAGAAGGAGTTGAAAGCGAGAGAACGTCAATGA
TGATGAACGATCACGAAACCCAGTAAACACAATTTCAATTCAAATTTAAT
TTCCTATTCTTCGCCGGGTCACGATATGACGGCAGAAGTGGGATAGACAG
AATACTAACGATCGATTGTGTTATTTAGTAAACAAAAACCTTTAGTGAAT
AACAATAGTGTTTGAAATGACGAAACCATGTTGAGATGTGAATAAATGTC
ATTGTCAAATACAGTAGTACGTTTTGATTGATTAATAATACTTCATTACT
TTGAATTTTCACATTTATCATTAGATAATAAAAACAGAAAAACTGGCCAA
TATTCTTTATTCCATTTTCCCGATATCTTTCCAAAAAAAAAGCCTTATTC
AGATTAGCTTTAAAAAAGTCA

Coding sequence (CDS) from alignment at sc0000071_pilon:90067..97987-

>MSTRG.10252.1.p2 ID=MSTRG.10252.1.p2|Name=MSTRG.10252.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000071_pilon:90067..97987- (Clytia hemisphaerica_ch_hm2_pilon)
GTAACGGATGGTGGCTAAAAAATTGTTGGCAGATCAGTTTGAACGGAATA
TACGGACAACGTTGGTTGGCTTGGAAAGGAATCCATTGGTTGGGATTTAA
AGGTTGGGGCGAAAGTTTACAACAAACCCAAATGATGATGAGATGAATGA
CGATGAAAATGCTTACATTTTTGGTAATTTTAGCATTGTTATGTAAACAC
ATGTGGGCGACAACCGAAGAAAGTCGTTTCGTTAAAGTCAAAGAGAAAGC
CGCGTTGGAAGGTCTGGTACCGAACCATCAACATAATGTGTCCAGTACTA
CAGAATGTCTGCTGATTGGACAACAATGGGAATCGTACTTGATTCAAACA
ACAGACCAAAACAATGGAATCCTATGTTCGCTCTTTCTTCATTATACGGA
AGATACTGTCTCCAAAATGAGGCCAGATAATAGAAGCGAGGTTTACCAGC
TCGACACAAAGGTCGAGAAAGATTGTTTGGCTTGGCATCGCCATGGTTAC
GTGAAAAGTGGTATCTACCGCATCGGCATCGAAGGAAGCCCTGTGTTGCA
GGTTTCTTGTGATATGGAGAACCATGGCGGTGGTTGGATCGTGTTCCAAA
GGCGGTTTGACGGCTCCGTCGATTTCAATCAAGATTGGGAAACGTATAAG
AGAGGTTTCGGGAATTTGGAAGGAGTTTTTTGGTTGGGGAATGATTTGAT
TCATTTGTTGAGCACCAGGTCACCTAAGACAGAGCTTCTATTGTATGGGA
AAGGGTTCGATGGGATGGAAGTGTACGCTCAGTTTTTAGGGTTTGCAGTG
GGTGATGAGGGAACTGGGTACAAGTTGACATCAGGTGTAGCGATTGCAGG
GAGAGCACATGCGGCATGGCTGTCTCACAATGGAATGCGGTTCTCTACTC
GTGATGTTGATAACGATGCAAAGAGTTCTGGAAAATGTTCCGAAGGTAAC
GGATGGTGGCTAAAAAATTGTTGGCAGATCAGTTTGAACGGAATATACGG
ACAACGTTGGTTGGCTTGGAAAGGAATCCATTGGTTGGGATTTAAAGGTT
GGGGCGAAAGTTTACAACAAACCCAAATGATGATGAGATGAATGACGATG
AAAATGCTTACATTTTTGGTAATTTTAGCATTGTTATGTAAACACATGTG
GGCGACAACCGAAGAAAGTCGTTTCGTTAAAGTCAAAGAGAAAGCCGCGT
TGGAAGGTCTGGTACCGAACCATCAACATAATGTGTCCAGTACTACAGAA
TGTCTGCTGATTGGACAACAATGGGAATCGTACTTGATTCAAACAACAGA
CCAAAACAATGGAATCCTATGTTCGCTCTTTCTTCATTATACGGAAGATA
CTGTCTCCAAAATGAGGCCAGATAATAGAAGCGAGGTTTACCAGCTCGAC
ACAAAGGTCGAGAAAGATTGTTTGGCTTGGCATCGCCATGGTTACGTGAA
AAGTGGTATCTACCGCATCGGCATCGAAGGAAGCCCTGTGTTGCAGGTTT
CTTGTGATATGGAGAACCATGGCGGTGGTTGGATCGTGTTCCAAAGGCGG
TTTGACGGCTCCGTCGATTTCAATCAAGATTGGGAAACGTATAAGAGAGG
TTTCGGGAATTTGGAAGGAGTTTTTTGGTTGGGGAATGATTTGATTCATT
TGTTGAGCACCAGGTCACCTAAGACAGAGCTTCTATTGTATGGGAAAGGG
TTCGATGGGATGGAAGTGTACGCTCAGTTTTTAGGGTTTGCAGTGGGTGA
TGAGGGAACTGGGTACAAGTTGACATCAGGTGTAGCGATTGCAGGGAGAG
CACATGCGGCATGGCTGTCTCACAATGGAATGCGGTTCTCTACTCGTGAT
GTTGATAACGATGCAAAGAGTTCTGGAAAATGTTCCGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10252MSTRG.10252Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10252.1.p2MSTRG.10252.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10252.1.p2.exon6MSTRG.10252.1.p2.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10252.1.p2.exon5MSTRG.10252.1.p2.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10252.1.p2.exon4MSTRG.10252.1.p2.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10252.1.p2.exon3MSTRG.10252.1.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10252.1.p2.exon2MSTRG.10252.1.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10252.1.p2.exon1MSTRG.10252.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000071_pilongenomesc0000071_pilon:90067..97987 -