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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000990 ID=TCONS_00000990|Name=TCONS_00000990|organism=Clytia hemisphaerica|type=transcript|length=3243bp
TATCTATCTTAAGGATGTTGGATAATATctttatgaatttattttcagca
aaaataacAATGTGTTAATAAATATTATGTTTCATGACATTACATTATAA
GAAACTGTCATGGGAGGTGTTGTACCGAAAGGCAAAAATAATGATGAACT
AGTTGATAATTTGATTGAAGCGAAATATTTATCTGATCCACGAATATGTA
GGATCTTCAGGCAAGTTGATCGAGGAGATTTTTACCCTGGTGAATATTAT
GAAGATGCTTATCGAGATCAAGCCATGAAATCTGGTAACCTTCATCTGAG
TGCTCCTTGTATTTATTGTTCTGTTATGGAAAACATGGACTTGTATCCAG
GTCTGTCCTTTTTGAATATTGGAAGTGGTACAGGCTATCTTTCAACAATG
GTAGGCCAAGTGTTAGGACCATTTGACACGAATCATGGCATTGAACTTTT
TGAAGATGCTATAAACTATTCGCAATCTAACATCGAACGTTTTATGAAAT
ACAGTGATGGTTTTCAAGTGACACATTTTTGTAAACCTCGTATCGTGCAA
GGAAATGTACATTCTTTCGACATCACTTTTCGTCAGTACGACCGTGTGTA
CGTTGGTGCAAGACTGATGGATTTACATATGAAGGAGAAAATCAAAGAGT
TGGTCAAAGTTGGTGGTGTTCTTATCTTCCCAACTGGTGAAAATCTgatg
aaattcaacaaagtttcaGAGACAGAATGGGAAGAGAAGTCATTATTGAA
TGTTCAATTTTCTGATTTGATCGATGAAAAGCCTGGTGATACAAAAGATA
TCAGGATATATACACAACCACCAACACTGAAAGAACTTTCTCGTCAAATC
ATTCTACAAAGTGTCTTCACTTTGACCGCACCCGAAGATGAAATCTCCTT
CGCTCAACTAGATATTTTAGATGACTTACCATTACCTAGAATATTGATCA
AATATTTGCGATATTTTCGCGACGCCAACCACCCTAAgccagtttcattg
aaaaagcATCGAACATTTTCCAGCGATGAGGACTCTTTCAGTAGTGACGA
CggagatgatgatgatgatgaaaatggAGGCGGTGGTGGTGGCGGGGGTG
GTGGTAATAGAATACGATTTCGTATCATTATAAGGTGAGCGGTGAAAAAA
TTCCGAATAAAAAGTTTGCTACTCTATTGACTGGTGTACTAACTAATGTC
ACATTCTGACACGCACAAAATGATAACGAACTGCCCGGAATACGACTCGA
ATCTAGAAAAGGGTAGCCACTCTTCATTTCTCGTCGAACGCAGAAAATAC
TTGTATTTGAGTATATGTTAAAATTGACAGTTCCCGTCCAATATTCAATA
GTCATCATTAGTCATCATTTGATGGGACGGGGGATAACATCTTAAGCTGA
TTATCGTCGCTTTTTTGTTGGTGTTTTGTTTCGTTTTTAGGGATCATTGA
ATACTATTTACTAATGCTTACATGCTTTCCCCCATAATACaggttttaaa
gaaaaacactgAGATACATGATAATAAACATATCCTTTTAGTATTCCAAC
TAACTAATATATGAGCCATTTCTGCATCTATATAAAATATCCAGTGCTCA
AATATTAAGGAAAAAGCATAGCAAGGTTTCCATTTACTTTATGGTGCGAG
GTAATGCGGCATTTAGGTTTTGGGTTCTGATCCGATTTATTAGATTCCTC
TTTCAGTaatgtttttgtaaaaatgttgttttgcattttcacgaaatttt
taCTGTACCAATAcgctcttctcgagatgcataaatttattgttgtcctc
gttttcaacacatttcattgctatgaaattatacatttaaaccaatttaa
attcccaaaaggcaacaaaagtacttgaaattcaaaatgtctcatgaggt
gtgaacaacacaattatcattgtgaatatgtaattttatagcaataaaat
ctgtttgaaaacgagggcaacaataaatttatgcatctcgagaagagtgt
attaattTGAATTTAGGAGAAATAGGAGTTATAGTTAGGTTTCGAAATTC
AGGAGATATACTGTGAAATGCAATGTAGGGATTGGCTTTTCGACAATAGt
gttatttgaaattttctttaagcATTGACAATGTACAtagtaattttatt
tttttagacaGAAATTctcatatttatatattttcatgaaaagtaaattt
ttaacAGCCTGGGAAttcttataataagagtcatTACATTACAAGGTTCA
CCCTTACTCAAGTGAATGTACATATTGGCTGTTTACCTAACTTAAGTTAT
CAGATAGggaacttttaaaatattttttcatgtgtTACAATTTGCTAATT
CATATGCTAAAATATGACCTTATCCCTTACGCTAATTATCAATTTTAAGA
ATCCCACAGTAATGCGTGAAATTGTAAATTGTTTGACTCTTTTCAGAGAA
Agcccaaaaaactgttttttgtatttataattttttctttaaaaaaataa
ccgATCTAAAGTAGATCAACCCCTGTAAATAGATTTGACAAATCTTATAA
TTTATTATTTCTATGTTACATAAATCTTGTTTTGGACTAAACACCATGTG
CATAGGTTAATTttcattctcttctttttttccagaAGAATTACATGTAT
CAATCGAAATTCATGACAACATGAAATTAAATATCCATAGTTCATTATTT
TTGCAGAAGGTTGCGACAAAGAAGCCTCTGTATCATAGGTTGTCTTAACA
CTGTTAAAGTATTATTCGAAAAATACGACCAACCATATTTGTTCGATGTC
TGCAACAGAAGAATTCAAAAATctcgattttattttttcttgataTCAAC
AATTTCAATGTTCAGACTGTTGATTATTCTCTTTATGAGCGGTTGAAAGT
TGTTGTTGTGGTCTTGGATGTTAGTTCTTCGGTGATGATGGTCATGGTAT
TCATCATCATGGTGAGGATATCGGACTTGAAACATGGGAAGTTCTCTTTG
TGGTGGTGCGAATAAAGGTGTGTGGTATGACTGGTGCAAAGGTGTAGGGA
AAGTGTGCTCATGCTCGTAATACAAATCATCATCATGGTGATCATCGTTG
CCATGGTGAGATCCATGAAAACTTCCATGGTCAGTCGTCTGATGGTAATG
ATCACGTGCTGGATGGTCCAATTCATGGTGTTCGTATTGGTGAGGATTGT
GATGTTTTACGTATCTGTTGtgaagaaaaacaaatcaatcCCT Run BLAST on NCBI protein sequence of TCONS_00000990-protein >TCONS_00000990-protein ID=TCONS_00000990-protein|Name=TCONS_00000990-protein|organism=Clytia hemisphaerica|type=polypeptide|length=342bp
MGGVVPKGKNNDELVDNLIEAKYLSDPRICRIFRQVDRGDFYPGEYYEDA
YRDQAMKSGNLHLSAPCIYCSVMENMDLYPGLSFLNIGSGTGYLSTMVGQ
VLGPFDTNHGIELFEDAINYSQSNIERFMKYSDGFQVTHFCKPRIVQGNV
HSFDITFRQYDRVYVGARLMDLHMKEKIKELVKVGGVLIFPTGENLMKFN
KVSETEWEEKSLLNVQFSDLIDEKPGDTKDIRIYTQPPTLKELSRQIILQ
SVFTLTAPEDEISFAQLDILDDLPLPRILIKYLRYFRDANHPKPVSLKKH
RTFSSDEDSFSSDDGDDDDDENGGGGGGGGGGNRIRFRIIIR Run BLAST on NCBI transcript from alignment at sc0000007:343603..347532+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000990 ID=TCONS_00000990|Name=TCONS_00000990|organism=Clytia hemisphaerica|type=transcript|length=3930bp|location=Sequence derived from alignment at sc0000007:343603..347532+ (Clytia hemisphaerica)
TATCTATCTTAAGGATGTTGGATAATATctttatgaatttattttcagca
aaaataacAATGTGTTAATAAATATTATGTTTCATGACATTACATTATAA
GAAACTGTCATGGGAGGTGTTGTACCGAAAGGCAAAAATAATGATGAACT
AGTTGATAATTTGATTGAAGCGAAATATTTATCTGATCCACGAATATGTA
GGATCTTCAGGCAAGTTGATCGAGGAGATTTTTACCCTGGTGAATATTAT
GAAGATGCTTATCGAGATCAAGCCATGAAATCTGGTAACCTTCATCTGAG
TGCTCCTTGTATTTATTGTTCTGTTATGGAAAACATGGACTTGTATCCAG
GTAATgcttctttgtatttttttatttattgctgTCCATTCTCAATGTTT
TATATTTAGCTTGTTATCGCTTTTAATGTTGGTCAAATATCaacgaaaaa
aggaaaacattgaCAGACTGGGGTAAAGTAATGATAACGATATTTTAATC
CTTTTTAATGGCTACCATTAATTTTTACGATCAAGACTGAAAAATCTAAT
TACTTTGAACATCTAAACCTTCCGAAACTTCCCAAGATCCATATACATCA
TCATTGCCTCAAAATCTTTCGTCATATCGCGCTTGTCATAAAGTATGTTT
TGCTGTTCTATTTACAGGTCTGTCCTTTTTGAATATTGGAAGTGGTACAG
GCTATCTTTCAACAATGGTAGGCCAAGTGTTAGGACCATTTGACACGAAT
CATGGCATTGAACTTTTTGAAGATGCTATAAACTATTCGCAATCTAACAT
CGAACGTTTTATGAAATACAGTGATGGTTTTCAAGTGACACATTTTTGTA
AACCTCGTATCGTGCAAGGAAATGTACATTCTTTCGACATCACTTTTCGT
CAGTACGACCGTGTGTACGTTGGTGCAAGACTGATGGATTTACATATGAA
GGAGAAAATCAAAGAGTTGGTCAAAGTTGGTGGTGTTCTTATCTTCCCAA
CTGGTGAAAATGTAAGTCATGTTGCTCCTCgttctatttcaaattatttt
caaatttcacaaaaatgtaacaGTTACAACAGCTATTAAAGAAATGTTCA
AACCGGTTCAAACCCCCAAACATATCTTGATATTTAAAGCGAGAACTATT
GACGCGAAgagtttgttttcttttaccTGAAACTATGAAGCATTATATTC
ATTGATTTCAGCTgatgaaattcaacaaagtttcaGAGACAGAATGGGAA
GAGAAGTCATTATTGAATGTTCAATTTTCTGATTTGATCGATGAAAAGCC
TGGTGATACAAAAGATATCAGGATATGTAAGCTGTCTTGAAAATTGCTCT
TGCTTTATCTTGGTTCtatgattttgtttttcttttacagTTGATCTTTT
GCTGCATTTCGGTCCTATTCTCAtcatcacttttaaaaattttatccGGC
TTCTTTGCATCACTATCTAAACACTAAGATGATCTTTCTTCTTTAGATAC
ACAACCACCAACACTGAAAGAACTTTCTCGTCAAATCATTCTACAAAGTG
TCTTCACTTTGACCGCACCCGAAGATGAAATCTCCTTCGCTCAACTAGAT
ATTTTAGATGACTTACCATTACCTAGAATATTGATCAAATATTTGCGATA
TTTTCGCGACGCCAACCACCCTAAgccagtttcattgaaaaagcATCGAA
CATTTTCCAGCGATGAGGACTCTTTCAGTAGTGACGACggagatgatgat
gatgatgaaaatggAGGCGGTGGTGGTGGCGGGGGTGGTGGTAATAGAAT
ACGATTTCGTATCATTATAAGGTGAGCGGTGAAAAAATTCCGAATAAAAA
GTTTGCTACTCTATTGACTGGTGTACTAACTAATGTCACATTCTGACACG
CACAAAATGATAACGAACTGCCCGGAATACGACTCGAATCTAGAAAAGGG
TAGCCACTCTTCATTTCTCGTCGAACGCAGAAAATACTTGTATTTGAGTA
TATGTTAAAATTGACAGTTCCCGTCCAATATTCAATAGTCATCATTAGTC
ATCATTTGATGGGACGGGGGATAACATCTTAAGCTGATTATCGTCGCTTT
TTTGTTGGTGTTTTGTTTCGTTTTTAGGGATCATTGAATACTATTTACTA
ATGCTTACATGCTTTCCCCCATAATACaggttttaaagaaaaacactgAG
ATACATGATAATAAACATATCCTTTTAGTATTCCAACTAACTAATATATG
AGCCATTTCTGCATCTATATAAAATATCCAGTGCTCAAATATTAAGGAAA
AAGCATAGCAAGGTTTCCATTTACTTTATGGTGCGAGGTAATGCGGCATT
TAGGTTTTGGGTTCTGATCCGATTTATTAGATTCCTCTTTCAGTaatgtt
tttgtaaaaatgttgttttgcattttcacgaaatttttaCTGTACCAATA
cgctcttctcgagatgcataaatttattgttgtcctcgttttcaacacat
ttcattgctatgaaattatacatttaaaccaatttaaattcccaaaaggc
aacaaaagtacttgaaattcaaaatgtctcatgaggtgtgaacaacacaa
ttatcattgtgaatatgtaattttatagcaataaaatctgtttgaaaacg
agggcaacaataaatttatgcatctcgagaagagtgtattaattTGAATT
TAGGAGAAATAGGAGTTATAGTTAGGTTTCGAAATTCAGGAGATATACTG
TGAAATGCAATGTAGGGATTGGCTTTTCGACAATAGtgttatttgaaatt
ttctttaagcATTGACAATGTACAtagtaattttatttttttagacaGAA
ATTctcatatttatatattttcatgaaaagtaaatttttaacAGCCTGGG
AAttcttataataagagtcatTACATTACAAGGTTCACCCTTACTCAAGT
GAATGTACATATTGGCTGTTTACCTAACTTAAGTTATCAGATAGggaact
tttaaaatattttttcatgtgtTACAATTTGCTAATTCATATGCTAAAAT
ATGACCTTATCCCTTACGCTAATTATCAATTTTAAGAATCCCACAGTAAT
GCGTGAAATTGTAAATTGTTTGACTCTTTTCAGAGAAAgcccaaaaaact
gttttttgtatttataattttttctttaaaaaaataaccgATCTAAAGTA
GATCAACCCCTGTAAATAGATTTGACAAATCTTATAATTTATTATTTCTA
TGTTACATAAATCTTGTTTTGGACTAAACACCATGTGCATAGGTTAATTt
tcattctcttctttttttccagaAGAATTACATGTATCAATCGAAATTCA
TGACAACATGAAATTAAATATCCATAGTTCATTATTTTTGCAGAAGGTTG
CGACAAAGAAGCCTCTGTATCATAGGTTGTCTTAACACTGTTAAAGTATT
ATTCGAAAAATACGACCAACCATATTTGTTCGATGTCTGCAACAGAAGAA
TTCAAAAATctcgattttattttttcttgataTCAACAATTTCAATGTTC
AGACTGTTGATTATTCTCTTTATGAGCGGTTGAAAGTTGTTGTTGTGGTC
TTGGATGTTAGTTCTTCGGTGATGATGGTCATGGTATTCATCATCATGGT
GAGGATATCGGACTTGAAACATGGGAAGTTCTCTTTGTGGTGGTGCGAAT
AAAGGTGTGTGGTATGACTGGTGCAAAGGTGTAGGGAAAGTGTGCTCATG
CTCGTAATACAAATCATCATCATGGTGATCATCGTTGCCATGGTGAGATC
CATGAAAACTTCCATGGTCAGTCGTCTGATGGTAATGATCACGTGCTGGA
TGGTCCAATTCATGGTGTTCGTATTGGTGAGGATTGTGATGTTTTACGTA
TCTGTTGtgaagaaaaacaaatcaatcCCT Coding sequence (CDS) from alignment at sc0000007:343603..347532+ >TCONS_00000990 ID=TCONS_00000990|Name=TCONS_00000990|organism=Clytia hemisphaerica|type=CDS|length=4116bp|location=Sequence derived from alignment at sc0000007:343603..347532+ (Clytia hemisphaerica)
ATGGGAGGTGTTGTACCGAAAGGCAAAAATAATGATGAACTAGTTGATAA
TTTGATTGAAGCGAAATATTTATCTGATCCACGAATATGTAGGATCTTCA
GGCAAGTTGATCGAGGAGATTTTTACCCTGGTGAATATTATGAAGATGCT
TATCGAGATCAAGCCATGAAATCTGGTAACCTTCATCTGAGTGCTCCTTG
TATTTATTGTTCTGTTATGGAAAACATGGACTTGTATCCAGGTCTGTCCT
TTTTGAATATTGGAAGTGGTACAGGCTATCTTTCAACAATGGTAGGCCAA
GTGTTAGGACCATTTGACACGAATCATGGCATTGAACTTTTTGAAGATGC
TATAAACTATTCGCAATCTAACATCGAACGTTTTATGAAATACAGTGATG
GTTTTCAAGTGACACATTTTTGTAAACCTCGTATCGTGCAAGGAAATGTA
CATTCTTTCGACATCACTTTTCGTCAGTACGACCGTGTGTACGTTGGTGC
AAGACTGATGGATTTACATATGAAGGAGAAAATCAAAGAGTTGGTCAAAG
TTGGTGGTGTTCTTATCTTCCCAACTGGTGAAAATCTgatgaaattcaac
aaagtttcaGAGACAGAATGGGAAGAGAAGTCATTATTGAATGTTCAATT
TTCTGATTTGATCGATGAAAAGCCTGGTGATACAAAAGATATCAGGATAT
ATACACAACCACCAACACTGAAAGAACTTTCTCGTCAAATCATTCTACAA
AGTGTCTTCACTTTGACCGCACCCGAAGATGAAATCTCCTTCGCTCAACT
AGATATTTTAGATGACTTACCATTACCTAGAATATTGATCAAATATTTGC
GATATTTTCGCGACGCCAACCACCCTAAgccagtttcattgaaaaagcAT
CGAACATTTTCCAGCGATGAGGACTCTTTCAGTAGTGACGACggagatga
tgatgatgatgaaaatggAGGCGGTGGTGGTGGCGGGGGTGGTGGTAATA
GAATACGATTTCGTATCATTATAAGGTGAATGGGAGGTGTTGTACCGAAA
GGCAAAAATAATGATGAACTAGTTGATAATTTGATTGAAGCGAAATATTT
ATCTGATCCACGAATATGTAGGATCTTCAGGCAAGTTGATCGAGGAGATT
TTTACCCTGGTGAATATTATGAAGATGCTTATCGAGATCAAGCCATGAAA
TCTGGTAACCTTCATCTGAGTGCTCCTTGTATTTATTGTTCTGTTATGGA
AAACATGGACTTGTATCCAGGTCTGTCCTTTTTGAATATTGGAAGTGGTA
CAGGCTATCTTTCAACAATGGTAGGCCAAGTGTTAGGACCATTTGACACG
AATCATGGCATTGAACTTTTTGAAGATGCTATAAACTATTCGCAATCTAA
CATCGAACGTTTTATGAAATACAGTGATGGTTTTCAAGTGACACATTTTT
GTAAACCTCGTATCGTGCAAGGAAATGTACATTCTTTCGACATCACTTTT
CGTCAGTACGACCGTGTGTACGTTGGTGCAAGACTGATGGATTTACATAT
GAAGGAGAAAATCAAAGAGTTGGTCAAAGTTGGTGGTGTTCTTATCTTCC
CAACTGGTGAAAATCTgatgaaattcaacaaagtttcaGAGACAGAATGG
GAAGAGAAGTCATTATTGAATGTTCAATTTTCTGATTTGATCGATGAAAA
GCCTGGTGATACAAAAGATATCAGGATATATACACAACCACCAACACTGA
AAGAACTTTCTCGTCAAATCATTCTACAAAGTGTCTTCACTTTGACCGCA
CCCGAAGATGAAATCTCCTTCGCTCAACTAGATATTTTAGATGACTTACC
ATTACCTAGAATATTGATCAAATATTTGCGATATTTTCGCGACGCCAACC
ACCCTAAgccagtttcattgaaaaagcATCGAACATTTTCCAGCGATGAG
GACTCTTTCAGTAGTGACGACggagatgatgatgatgatgaaaatggAGG
CGGTGGTGGTGGCGGGGGTGGTGGTAATAGAATACGATTTCGTATCATTA
TAAGGTGAATGGGAGGTGTTGTACCGAAAGGCAAAAATAATGATGAACTA
GTTGATAATTTGATTGAAGCGAAATATTTATCTGATCCACGAATATGTAG
GATCTTCAGGCAAGTTGATCGAGGAGATTTTTACCCTGGTGAATATTATG
AAGATGCTTATCGAGATCAAGCCATGAAATCTGGTAACCTTCATCTGAGT
GCTCCTTGTATTTATTGTTCTGTTATGGAAAACATGGACTTGTATCCAGG
TCTGTCCTTTTTGAATATTGGAAGTGGTACAGGCTATCTTTCAACAATGG
TAGGCCAAGTGTTAGGACCATTTGACACGAATCATGGCATTGAACTTTTT
GAAGATGCTATAAACTATTCGCAATCTAACATCGAACGTTTTATGAAATA
CAGTGATGGTTTTCAAGTGACACATTTTTGTAAACCTCGTATCGTGCAAG
GAAATGTACATTCTTTCGACATCACTTTTCGTCAGTACGACCGTGTGTAC
GTTGGTGCAAGACTGATGGATTTACATATGAAGGAGAAAATCAAAGAGTT
GGTCAAAGTTGGTGGTGTTCTTATCTTCCCAACTGGTGAAAATCTgatga
aattcaacaaagtttcaGAGACAGAATGGGAAGAGAAGTCATTATTGAAT
GTTCAATTTTCTGATTTGATCGATGAAAAGCCTGGTGATACAAAAGATAT
CAGGATATATACACAACCACCAACACTGAAAGAACTTTCTCGTCAAATCA
TTCTACAAAGTGTCTTCACTTTGACCGCACCCGAAGATGAAATCTCCTTC
GCTCAACTAGATATTTTAGATGACTTACCATTACCTAGAATATTGATCAA
ATATTTGCGATATTTTCGCGACGCCAACCACCCTAAgccagtttcattga
aaaagcATCGAACATTTTCCAGCGATGAGGACTCTTTCAGTAGTGACGAC
ggagatgatgatgatgatgaaaatggAGGCGGTGGTGGTGGCGGGGGTGG
TGGTAATAGAATACGATTTCGTATCATTATAAGGTGAATGGGAGGTGTTG
TACCGAAAGGCAAAAATAATGATGAACTAGTTGATAATTTGATTGAAGCG
AAATATTTATCTGATCCACGAATATGTAGGATCTTCAGGCAAGTTGATCG
AGGAGATTTTTACCCTGGTGAATATTATGAAGATGCTTATCGAGATCAAG
CCATGAAATCTGGTAACCTTCATCTGAGTGCTCCTTGTATTTATTGTTCT
GTTATGGAAAACATGGACTTGTATCCAGGTCTGTCCTTTTTGAATATTGG
AAGTGGTACAGGCTATCTTTCAACAATGGTAGGCCAAGTGTTAGGACCAT
TTGACACGAATCATGGCATTGAACTTTTTGAAGATGCTATAAACTATTCG
CAATCTAACATCGAACGTTTTATGAAATACAGTGATGGTTTTCAAGTGAC
ACATTTTTGTAAACCTCGTATCGTGCAAGGAAATGTACATTCTTTCGACA
TCACTTTTCGTCAGTACGACCGTGTGTACGTTGGTGCAAGACTGATGGAT
TTACATATGAAGGAGAAAATCAAAGAGTTGGTCAAAGTTGGTGGTGTTCT
TATCTTCCCAACTGGTGAAAATCTgatgaaattcaacaaagtttcaGAGA
CAGAATGGGAAGAGAAGTCATTATTGAATGTTCAATTTTCTGATTTGATC
GATGAAAAGCCTGGTGATACAAAAGATATCAGGATATATACACAACCACC
AACACTGAAAGAACTTTCTCGTCAAATCATTCTACAAAGTGTCTTCACTT
TGACCGCACCCGAAGATGAAATCTCCTTCGCTCAACTAGATATTTTAGAT
GACTTACCATTACCTAGAATATTGATCAAATATTTGCGATATTTTCGCGA
CGCCAACCACCCTAAgccagtttcattgaaaaagcATCGAACATTTTCCA
GCGATGAGGACTCTTTCAGTAGTGACGACggagatgatgatgatgatgaa
aatggAGGCGGTGGTGGTGGCGGGGGTGGTGGTAATAGAATACGATTTCG
TATCATTATAAGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000990-exon-sc0000007-1491911889:343603..343952 | TCONS_00000990-exon-sc0000007-1491911889:343603..343952 | Clytia hemisphaerica | exon |
| TCONS_00000990-exon-sc0000007-1510915933:343603..343952 | TCONS_00000990-exon-sc0000007-1510915933:343603..343952 | Clytia hemisphaerica | exon |
| TCONS_00000990-exon-sc0000007-1575043694:343603..343952 | TCONS_00000990-exon-sc0000007-1575043694:343603..343952 | Clytia hemisphaerica | exon |
| TCONS_00000990-exon-sc0000007-1491911889:344270..344613 | TCONS_00000990-exon-sc0000007-1491911889:344270..344613 | Clytia hemisphaerica | exon |
| TCONS_00000990-exon-sc0000007-1510915933:344270..344613 | TCONS_00000990-exon-sc0000007-1510915933:344270..344613 | Clytia hemisphaerica | exon |
| TCONS_00000990-exon-sc0000007-1575043694:344270..344613 | TCONS_00000990-exon-sc0000007-1575043694:344270..344613 | Clytia hemisphaerica | exon |
| TCONS_00000990-exon-sc0000007-1491911889:344814..344928 | TCONS_00000990-exon-sc0000007-1491911889:344814..344928 | Clytia hemisphaerica | exon |
| TCONS_00000990-exon-sc0000007-1510915933:344814..344928 | TCONS_00000990-exon-sc0000007-1510915933:344814..344928 | Clytia hemisphaerica | exon |
| TCONS_00000990-exon-sc0000007-1575043694:344814..344928 | TCONS_00000990-exon-sc0000007-1575043694:344814..344928 | Clytia hemisphaerica | exon |
| TCONS_00000990-exon-sc0000007-1491911889:345099..347532 | TCONS_00000990-exon-sc0000007-1491911889:345099..347532 | Clytia hemisphaerica | exon |
| TCONS_00000990-exon-sc0000007-1510915933:345099..347532 | TCONS_00000990-exon-sc0000007-1510915933:345099..347532 | Clytia hemisphaerica | exon |
| TCONS_00000990-exon-sc0000007-1575043694:345099..347532 | TCONS_00000990-exon-sc0000007-1575043694:345099..347532 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:343603..347532 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0035556 | intracellular signal transduction |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0035556 |
intracellular signal transduction |
Blast
BLAST of TCONS_00000990 vs. Swiss-Prot (Human)
Match: PCMD2 (Protein-L-isoaspartate O-methyltransferase domain-containing protein 2 OS=Homo sapiens GN=PCMTD2 PE=2 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 1.734e-70 Identity = 119/256 (46.48%), Postives = 163/256 (63.67%), Query Frame = 2
Query: 110 MGGVVPKGKNNDELVDNLIEAKYLSDPRICRIFRQVDRGDFYPGEYYEDAYRDQAMKSGNLHLSAPCIYCSVMENMDLYPGLSFLNIGSGTGYLSTMVGQVLGPFDTNHGIELFEDAINYSQSNIERFMKYSDGFQVTHFCKPRIVQGNVHSFDITFRQYDRVYVGARLMDLHMKEKIKELVKVGGVLIFPTGENLMKFNKVSETEWEEKSLLNVQFSDLIDEKPGDTKDIRIYTQPP----TLKELSRQIILQSV 865
MGG V G++NDEL+DNL EA+Y+ + + FR +DR D+Y E+ E+AY+D A K GN+HLSAPCIY VME +DL PGLSFLN+GSGTGYLS+MVG +LGPF NHG+EL D I Y++ ++ F++ SD F FC+P V GN QYDRVY GA + H +E +K L+KVGG+L+ P E L K + + WE K +L V F+ LI ++ R+ PP +L++L+R I ++
Sbjct: 1 MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGNIHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEYAKQKLDFFIRTSDSFDKFDFCEPSFVTGNCLEISPDCSQYDRVYCGAGVQKEH-EEYMKNLLKVGGILVMPLEEKLTKITRTGPSAWETKKILAVSFAPLIQPCHSESGKSRLVQLPPVAVRSLQDLARIAIRGTI 255
The following BLAST results are available for this feature:
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