TCONS_00000990-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000990-protein
Unique NameTCONS_00000990-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length342

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000990-protein ID=TCONS_00000990-protein|Name=TCONS_00000990-protein|organism=Clytia hemisphaerica|type=polypeptide|length=342bp
MGGVVPKGKNNDELVDNLIEAKYLSDPRICRIFRQVDRGDFYPGEYYEDA
YRDQAMKSGNLHLSAPCIYCSVMENMDLYPGLSFLNIGSGTGYLSTMVGQ
VLGPFDTNHGIELFEDAINYSQSNIERFMKYSDGFQVTHFCKPRIVQGNV
HSFDITFRQYDRVYVGARLMDLHMKEKIKELVKVGGVLIFPTGENLMKFN
KVSETEWEEKSLLNVQFSDLIDEKPGDTKDIRIYTQPPTLKELSRQIILQ
SVFTLTAPEDEISFAQLDILDDLPLPRILIKYLRYFRDANHPKPVSLKKH
RTFSSDEDSFSSDDGDDDDDENGGGGGGGGGGNRIRFRIIIR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000576XLOC_000576Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000990TCONS_00000990Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001496SOCS_box
IPR029063SAM-dependent_MTases
Vocabulary: Biological Process
TermDefinition
GO:0035556intracellular signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035556 intracellular signal transduction
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001496SOCS box domainPFAMPF07525SOCS_boxcoord: 237..285
e-value: 5.4E-5
score: 23.4
IPR001496SOCS box domainPROSITEPS50225SOCScoord: 235..289
score: 9.478
NoneNo IPR availableGENE3D3.40.50.150coord: 4..229
e-value: 3.7E-20
score: 72.0
NoneNo IPR availablePFAMPF01135PCMTcoord: 10..222
e-value: 3.8E-21
score: 75.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..336
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 15..197

Blast
[Close]
BLAST of TCONS_00000990-protein vs. Swiss-Prot (Human)
Match: PCMD2 (Protein-L-isoaspartate O-methyltransferase domain-containing protein 2 OS=Homo sapiens GN=PCMTD2 PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 6.378e-77
Identity = 119/252 (47.22%), Postives = 161/252 (63.89%), Query Frame = 0 
Query:    1 MGGVVPKGKNNDELVDNLIEAKYLSDPRICRIFRQVDRGDFYPGEYYEDAYRDQAMKSGNLHLSAPCIYCSVMENMDLYPGLSFLNIGSGTGYLSTMVGQVLGPFDTNHGIELFEDAINYSQSNIERFMKYSDGFQVTHFCKPRIVQGNVHSFDITFRQYDRVYVGARLMDLHMKEKIKELVKVGGVLIFPTGENLMKFNKVSETEWEEKSLLNVQFSDLIDEKPGDTKDIRIYTQPP----TLKELSRQII 248
            MGG V  G++NDEL+DNL EA+Y+    + + FR +DR D+Y  E+ E+AY+D A K GN+HLSAPCIY  VME +DL PGLSFLN+GSGTGYLS+MVG +LGPF  NHG+EL  D I Y++  ++ F++ SD F    FC+P  V GN         QYDRVY GA +   H +E +K L+KVGG+L+ P  E L K  +   + WE K +L V F+ LI     ++   R+   PP    +L++L+R  I
Sbjct:    1 MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGNIHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEYAKQKLDFFIRTSDSFDKFDFCEPSFVTGNCLEISPDCSQYDRVYCGAGVQKEH-EEYMKNLLKVGGILVMPLEEKLTKITRTGPSAWETKKILAVSFAPLIQPCHSESGKSRLVQLPPVAVRSLQDLARIAI 251
The following BLAST results are available for this feature:
BLAST of TCONS_00000990-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PCMD26.378e-7747.22Protein-L-isoaspartate O-methyltransferase domain-... [more]
back to top