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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009996 ID=TCONS_00009996|Name=TCONS_00009996|organism=Clytia hemisphaerica|type=transcript|length=1053bp
aaaatccaattctccttggaaatcgaattagaaagcgtcCCATTCTTCAT
GGTGATAAAATGTAGCTGTTGTTTTGTAAGCCAAGGGTTTGAACTTTAGT
TCTAGTAAAGGACTTTAGGACTAGTCACTTGGTTTGCGAAAGCTGTGGAA
CATTTTTCGTATTGGCTTTGCAgcaattaatttttcgaatttttgtgtGT
CACACTTTGTTTGCAgcgaaaagaaaagaagaaagcaAGAGTCTTGAGAA
TCCTAGAGAATCTGGGAATCTTAAACATACTTATTCCCATTTCTCATAGG
TTATTTCATGTACGACACATACGATATCCTATTGAATGACGGTTTCCGAC
AAAAGCCAGTGCTGATTCATCATGTTTTAATCTTGCATGCATTTCCATTt
gctttgatgacgtcatcgtacCATGGTTTTGCATTGTCAGCTCTTTTGAT
GGAATACAGTTCAATTTTCCTTCACTTGCGACGTCTTATGAAATACGCTA
ACAAAAAACCGACTATTTTCGGATTGCCGAGAATTTTCGTTGAAATGTTC
GTGAAAGTCTTTCTCGTTTTAACAATGCTCGTATTCCGACATTTGCTATC
GTTGTTTTTAATACGTCATATGTGGCAAAATCGCAACACCATTACTGGGA
TACCATTTTGGATTGGCATTACGTCATCAGTTGTTTTTATCCCAGTGAAT
ATCGGATTATCTTATCGGGTTTATAAAACCAAAGACTTAGAGAAAGGAAG
ACGTCGCACCATTGTTTCACCTTAGTTATACGGCACAGATATAGATTTTT
TTTACTGGATTGTCCCGTGTTGAAAAATGCTGAGTCAGCAGAAAAAACta
gattaaaatatttttttagcgaTGAAAGATTTTTCAGAGAAAAGTACAAG
CAAATTTCTTGGAAATACAAGcatttgataacttttgactgcTGTTTGCT
TCAAGGATGGCGGAACCTGGGTATTTTAATGATGACCTTGATGAAGTACT
GATAAGTTTCATTCCTGATGAACTAGTCAAGTCAATAAAGAATGGCACTG
ATC Run BLAST on NCBI transcript from alignment at sc0000101:477533..478785+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009996 ID=TCONS_00009996|Name=TCONS_00009996|organism=Clytia hemisphaerica|type=transcript|length=1253bp|location=Sequence derived from alignment at sc0000101:477533..478785+ (Clytia hemisphaerica)
aaaatccaattctccttggaaatcgaattagaaagcgtcCCATTCTTCAT
GGTGATAAAATGTAGCTGTTGTTTTGTAAGCCAAGGGTTTGAACTTTAGT
TCTAGTAAAGGACTTTAGGACTAGTCACTTGGTTTGCGAAAGCTGTGGAA
CATTTTTCGTATTGGCTTTGCAgcaattaatttttcgaatttttgtgtGT
CACACTTTGTTTGCAgcgaaaagaaaagaagaaagcaAGAGTCTTGAGAA
TCCTAGAGAATCTGGGAATCTTAAACATACTTATTCCCATTTCTCATAGG
TTATTTCATGTACGACACATACGATATCCTATTGAATGACGGTTTCCGAC
AAAAGCCAGTGCTGATTCATCATGTTTTAGTGAGTTGTTCTACCTTCCCG
AAACGCTCTCTTTTTCAGCGAATTTGTGGTGTTTTGACCAGAGAGTGTTA
GATTTGccgagaaatttttttgaaaatgttcgtCAAGATCAAGGAAACTT
CCTTTGTCCTTGAAAATTGTTATTCTATTAAACTTTCTCTGATTTtctat
tgatttttgaaaatttctcttttatttAGATCTTGCATGCATTTCCATTt
gctttgatgacgtcatcgtacCATGGTTTTGCATTGTCAGCTCTTTTGAT
GGAATACAGTTCAATTTTCCTTCACTTGCGACGTCTTATGAAATACGCTA
ACAAAAAACCGACTATTTTCGGATTGCCGAGAATTTTCGTTGAAATGTTC
GTGAAAGTCTTTCTCGTTTTAACAATGCTCGTATTCCGACATTTGCTATC
GTTGTTTTTAATACGTCATATGTGGCAAAATCGCAACACCATTACTGGGA
TACCATTTTGGATTGGCATTACGTCATCAGTTGTTTTTATCCCAGTGAAT
ATCGGATTATCTTATCGGGTTTATAAAACCAAAGACTTAGAGAAAGGAAG
ACGTCGCACCATTGTTTCACCTTAGTTATACGGCACAGATATAGATTTTT
TTTACTGGATTGTCCCGTGTTGAAAAATGCTGAGTCAGCAGAAAAAACta
gattaaaatatttttttagcgaTGAAAGATTTTTCAGAGAAAAGTACAAG
CAAATTTCTTGGAAATACAAGcatttgataacttttgactgcTGTTTGCT
TCAAGGATGGCGGAACCTGGGTATTTTAATGATGACCTTGATGAAGTACT
GATAAGTTTCATTCCTGATGAACTAGTCAAGTCAATAAAGAATGGCACTG
ATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009996-exon-sc0000101-1491911889:477533..477911 | TCONS_00009996-exon-sc0000101-1491911889:477533..477911 | Clytia hemisphaerica | exon |
| TCONS_00009996-exon-sc0000101-1510915933:477533..477911 | TCONS_00009996-exon-sc0000101-1510915933:477533..477911 | Clytia hemisphaerica | exon |
| TCONS_00009996-exon-sc0000101-1575043694:477533..477911 | TCONS_00009996-exon-sc0000101-1575043694:477533..477911 | Clytia hemisphaerica | exon |
| TCONS_00009996-exon-sc0000101-1491911889:478112..478785 | TCONS_00009996-exon-sc0000101-1491911889:478112..478785 | Clytia hemisphaerica | exon |
| TCONS_00009996-exon-sc0000101-1510915933:478112..478785 | TCONS_00009996-exon-sc0000101-1510915933:478112..478785 | Clytia hemisphaerica | exon |
| TCONS_00009996-exon-sc0000101-1575043694:478112..478785 | TCONS_00009996-exon-sc0000101-1575043694:478112..478785 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101 | supercontig | sc0000101:477533..478785 + |
Blast
The following BLAST results are available for this feature:
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