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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000071_pilon:162702..166314+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10255.1.p1 ID=MSTRG.10255.1.p1|Name=MSTRG.10255.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3613bp|location=Sequence derived from alignment at sc0000071_pilon:162702..166314+ (Clytia hemisphaerica_ch_hm2_pilon)
ttttagtgtaaaaaaagacaataatCACAAACAAATCCAAGAAACTTAAC
TTTCTTGTGCACCATGACTGAAGAGAAAGCGTGACTTTCATATAAAGAAG
AGCTGAATTGctattcaattttaaattgagGAATCGGATTGAATTTGGAA
CATCATAAGAAtggatttaaagaaaatttacacggttgttttgattttgg
tacTGACTGTCGTTGTCACTTTGTACATGCAGTACAAAGAAGGTTTCTTC
AAAATTATCATGGATTCGTCACCTATGAGAAGCCCTATGTTAAGACCAct
tgatattttacagaacacTTCGTGGTCTGCAAAGTTCAAAGAAACTATTG
CTTCTTTCAGAATGACTGAAAATTTAGCCACGGGGGACTCGAACGCAACT
GCTGTACCGTTGAAggtaattaaaaaattgaaactttcacaaaaagaTAT
TATCAAGAGATATGAAGATCGGTTAAAACTTCGTAAAGACAGTTGGGAGC
ATCACGAcgcggtctgtaaaatacctaATTTAAACCCGTTCGGGCCGAGT
GGGATGAAAGCATGGGCTACCAAAACGAAACAATATTGCGATATCAAAAA
GCTTGGAAAAATAGTCAAGAATAGATTCATAGTTGAGGACCCTGGAAGCA
AAATCAGCTTAGTAACCATGGAATATATTCTAAGAGGACGGAAACGAAAG
GCGGATGGTTCGTTGGACCCGCCCAAAGGGCGTACGTCCATGGTGATGGA
TAGTAAATACAGTTATCATAAGGTTTTGAACGATGACTTTCACGCACATT
TCACCATCGCTTATAAAGTAATATTCAATAAAGAACGTGGTGTATTCATG
TCCAGTCCTCTGGAACATGATTTCTTTCGCGCTGTGATTACAATGAAAAC
AGGCTCGAAAACCACTGAATACCACGCAACCATACACAACAAAGATGACG
TGTGTCGCAAACATGGTCGTAAATTTGATCCTAAATCAAAAACAGGATTA
CCTCTCAACGTCCACATGTTTATGGTGGATGCAATCTCCAAAGGCAATGC
TTACCGTCAGATGCCGAGATTGATGGAAATCCTAGAAGATGATGAAGATG
CAATGGTCTTTCAAGCTCACGGTATCCATGGTGATGGCACCACGTGTCAA
CTTATGGCAACCCTCGCTGGTGAGCTTTGAACAGTTATCTGTTATTGAGT
GGTGGCTTGATTTCggtgtttttttttgggggggagaAGTGATTTCCAAA
CAAGACTGTTTGACAAAATTAcccttgaaaattttggctgaacttATATT
CAGCGATATTATTGATAGAGCAATTGTCATTCAAAATTCATAGTCTATTT
TACCAGGATTTTTGTTAATCTCATAGTTTCTATTAATCTTGATATATCCA
CTGTTTCTTCAGGTTACAAATACAGACAAGAAGATTCGAATCCATGGCAA
CCaccaaataaacaaaattgtGACGGTATCGATCTCATCTTCAAAGATTT
CCATAAGGCAGGCTACACCACCCTATATAATGAAGATTTTGTTAGTGGTA
GTACCTTTCATTACAAAATGAACGGCTTCGACAAGCCCCCATCCGACTGG
TATCCACGTCCCTACTGGATAGCTGCCCATGAACGGGTAGAAGGCTGTGG
GAGGCCTCCCTGTATTTGTGAAGACGAAGAAATGATCCGGTTCTTGAAGA
CTTTCACAACGTTTTGTGAGCACGAAGCAAAATTTTCTATTCAAGTGACA
GCCAATGCGCATGATGACATGAATCTACTGTTTATGTTGGAAGATCAACT
CATTGGtaagaaaagcattttttatttcactCGCTAATATCTATCCAATT
CTCTaaagatttatatattttacctttCACTTGGGAGTATCGATTGTCTC
TGcgttaaaaaattaaagaaccTTTTACACAGTTGTCATTTTGTGTTTCT
TTTAAATTATGGCTTCTAATAATACAAGGCATGTATATGGTTTATTTTAC
TGCTATCCTCCGGGTAGAAATAGGATAATCTTTAAGATGTTTGCTCTCAG
AATTTTCATGCTCTTGGGTATTATATTTCCTTTCATTGATCTGCGATTTT
GCAATTCTTGAAAGGGCGATTCGctaaagtttatgctcgcgaaaaaatta
tttttcgtcGAATTCGCGAAAGTGattttggcaaatttcgcgatttttcg
acctcgtggaaagtttgtacgcctaaaataTATCAACTTTCTTTCCTCTC
CATTTAGAATTGTACGAGTTCTACAAAGAGAAAGCTCGCGTGGAAAACAC
CATGTTAATTTTCTTTGGTGATCACGGTGCCCGTTGGGGTGCACGTGGTA
ATTTCCGGAACACAAAGCAAGGTCGTTTAGAAGAATACAACCCGTTTTAT
TCACTCATTCTACCGCCTAACTTCAAAAAGAATTACAGAGAATTATACGA
TAATATTAAAGCTAATCAAAACGTTTTGACTTCGCATTTTGATGTTCACT
GGACGTTAAAGCATATTTTGTCTTATCCGAAAATCGAGGAGAAGCGTAAT
TACGGACAAAGTTTATTCACAAAGATCGATCCCAAAACACGGACATGCGA
TAAAACGGGAATCCCCggaaaatattgtttttgtttgtcaACAAAGAAAA
TAGATGCAAATACCTCTCAAGCGAACACTATAGCTCAGACGGCTGTTGAC
TTTATAAACAAAAAGATAGCTGAACATGAGAAGCCAAAAGAGTTGTGTGC
TAATCTAACTCTCAGTCGAATCATAGACTTGGAATATGCTGCAGATGAAC
aaaaaaaCGAAGGAATTTTTTATATCATGTTCGAGGTTGCTCCGAGCAAA
GCGACTTTTGATGTTCGCGTACGTAAAGACTTAAGTAAACAGACGACTTA
CGTTGACCCGGAAATCAGTCGGACTAACTTATATCGGAACCAACCGGCAT
GTATACAGGTAGCTTACCCAAAATTAGCACCTTTTTGTTATTGCAAAGTG
CAAACTAGTTAACACAGGGTATTCTACTCTTCTCTTTATATATTTTAACT
TTGTTCCAAATACTCAAATTTATTCTCTTATCTtagtagactagcaagcg
tctgccattccttggacacaggaacgcggggaATAATGCTTTtgaaaagt
tcttataaaaaatagaaattaccGCGGGAGGAGTCGTGGTGAACCCATTG
CGAGCATAAGCTGCAGCGAAATaaaacgacgtggtttactagttcTACTA
TCTTagccttaaaatttttgaaagcgCAATCGAGTAAGGTGAAAATTGCA
GAAATCTTCAGGCAACCTCGCGACTGAAACTAGAACCCATGAAacccaaa
tgaaaattttgaatcggATTCACACTCCTTATATAATACTGTATACTATA
TATTCAGGAAAAGATATAgtttatagatagtttatttgaaagttttaaat
gttttttcgttgtaatattttagttaaattttcaaatgcatttttgttGG
GAACGGCAGATAGATAGgttttgatttatattaaagaagatgatgatgaa
cagaacaaaaaaatgttgttttgttAACGTTGAGCTGTGAAAATACAATC
GCCTTTATGAATA Coding sequence (CDS) from alignment at sc0000071_pilon:162702..166314+ >MSTRG.10255.1.p1 ID=MSTRG.10255.1.p1|Name=MSTRG.10255.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6471bp|location=Sequence derived from alignment at sc0000071_pilon:162702..166314+ (Clytia hemisphaerica_ch_hm2_pilon)
AtggatttaaagaaaatttacacggttgttttgattttggtacTGACTGT
CGTTGTCACTTTGTACATGCAGTACAAAGAAGGTTTCTTCAAAATTATCA
TGGATTCGTCACCTATGAGAAGCCCTATGTTAAGACCActtgatatttta
cagaacacTTCGTGGTCTGCAAAGTTCAAAGAAACTATTGCTTCTTTCAG
AATGACTGAAAATTTAGCCACGGGGGACTCGAACGCAACTGCTGTACCGT
TGAAggtaattaaaaaattgaaactttcacaaaaagaTATTATCAAGAGA
TATGAAGATCGGTTAAAACTTCGTAAAGACAGTTGGGAGCATCACGAcgc
ggtctgtaaaatacctaATTTAAACCCGTTCGGGCCGAGTGGGATGAAAG
CATGGGCTACCAAAACGAAACAATATTGCGATATCAAAAAGCTTGGAAAA
ATAGTCAAGAATAGATTCATAGTTGAGGACCCTGGAAGCAAAATCAGCTT
AGTAACCATGGAATATATTCTAAGAGGACGGAAACGAAAGGCGGATGGTT
CGTTGGACCCGCCCAAAGGGCGTACGTCCATGGTGATGGATAGTAAATAC
AGTTATCATAAGGTTTTGAACGATGACTTTCACGCACATTTCACCATCGC
TTATAAAGTAATATTCAATAAAGAACGTGGTGTATTCATGTCCAGTCCTC
TGGAACATGATTTCTTTCGCGCTGTGATTACAATGAAAACAGGCTCGAAA
ACCACTGAATACCACGCAACCATACACAACAAAGATGACGTGTGTCGCAA
ACATGGTCGTAAATTTGATCCTAAATCAAAAACAGGATTACCTCTCAACG
TCCACATGTTTATGGTGGATGCAATCTCCAAAGGCAATGCTTACCGTCAG
ATGCCGAGATTGATGGAAATCCTAGAAGATGATGAAGATGCAATGGTCTT
TCAAGCTCACGGTATCCATGGTGATGGCACCACGTGTCAACTTATGGCAA
CCCTCGCTGGTTACAAATACAGACAAGAAGATTCGAATCCATGGCAACCa
ccaaataaacaaaattgtGACGGTATCGATCTCATCTTCAAAGATTTCCA
TAAGGCAGGCTACACCACCCTATATAATGAAGATTTTGTTAGTGGTAGTA
CCTTTCATTACAAAATGAACGGCTTCGACAAGCCCCCATCCGACTGGTAT
CCACGTCCCTACTGGATAGCTGCCCATGAACGGGTAGAAGGCTGTGGGAG
GCCTCCCTGTATTTGTGAAGACGAAGAAATGATCCGGTTCTTGAAGACTT
TCACAACGTTTTGTGAGCACGAAGCAAAATTTTCTATTCAAGTGACAGCC
AATGCGCATGATGACATGAATCTACTGTTTATGTTGGAAGATCAACTCAT
TGAATTGTACGAGTTCTACAAAGAGAAAGCTCGCGTGGAAAACACCATGT
TAATTTTCTTTGGTGATCACGGTGCCCGTTGGGGTGCACGTGGTAATTTC
CGGAACACAAAGCAAGGTCGTTTAGAAGAATACAACCCGTTTTATTCACT
CATTCTACCGCCTAACTTCAAAAAGAATTACAGAGAATTATACGATAATA
TTAAAGCTAATCAAAACGTTTTGACTTCGCATTTTGATGTTCACTGGACG
TTAAAGCATATTTTGTCTTATCCGAAAATCGAGGAGAAGCGTAATTACGG
ACAAAGTTTATTCACAAAGATCGATCCCAAAACACGGACATGCGATAAAA
CGGGAATCCCCggaaaatattgtttttgtttgtcaACAAAGAAAATAGAT
GCAAATACCTCTCAAGCGAACACTATAGCTCAGACGGCTGTTGACTTTAT
AAACAAAAAGATAGCTGAACATGAGAAGCCAAAAGAGTTGTGTGCTAATC
TAACTCTCAGTCGAATCATAGACTTGGAATATGCTGCAGATGAACaaaaa
aaCGAAGGAATTTTTTATATCATGTTCGAGGTTGCTCCGAGCAAAGCGAC
TTTTGATGTTCGCGTACGTAAAGACTTAAGTAAACAGACGACTTACGTTG
ACCCGGAAATCAGTCGGACTAACTTATATCGGAACCAACCGGCATGTATA
CAGGTAGCTTACCCAAAATTAGCACCTTTTTGTTATTGCAAAGTGCAAAC
TAGTTAAAtggatttaaagaaaatttacacggttgttttgattttggtac
TGACTGTCGTTGTCACTTTGTACATGCAGTACAAAGAAGGTTTCTTCAAA
ATTATCATGGATTCGTCACCTATGAGAAGCCCTATGTTAAGACCActtga
tattttacagaacacTTCGTGGTCTGCAAAGTTCAAAGAAACTATTGCTT
CTTTCAGAATGACTGAAAATTTAGCCACGGGGGACTCGAACGCAACTGCT
GTACCGTTGAAggtaattaaaaaattgaaactttcacaaaaagaTATTAT
CAAGAGATATGAAGATCGGTTAAAACTTCGTAAAGACAGTTGGGAGCATC
ACGAcgcggtctgtaaaatacctaATTTAAACCCGTTCGGGCCGAGTGGG
ATGAAAGCATGGGCTACCAAAACGAAACAATATTGCGATATCAAAAAGCT
TGGAAAAATAGTCAAGAATAGATTCATAGTTGAGGACCCTGGAAGCAAAA
TCAGCTTAGTAACCATGGAATATATTCTAAGAGGACGGAAACGAAAGGCG
GATGGTTCGTTGGACCCGCCCAAAGGGCGTACGTCCATGGTGATGGATAG
TAAATACAGTTATCATAAGGTTTTGAACGATGACTTTCACGCACATTTCA
CCATCGCTTATAAAGTAATATTCAATAAAGAACGTGGTGTATTCATGTCC
AGTCCTCTGGAACATGATTTCTTTCGCGCTGTGATTACAATGAAAACAGG
CTCGAAAACCACTGAATACCACGCAACCATACACAACAAAGATGACGTGT
GTCGCAAACATGGTCGTAAATTTGATCCTAAATCAAAAACAGGATTACCT
CTCAACGTCCACATGTTTATGGTGGATGCAATCTCCAAAGGCAATGCTTA
CCGTCAGATGCCGAGATTGATGGAAATCCTAGAAGATGATGAAGATGCAA
TGGTCTTTCAAGCTCACGGTATCCATGGTGATGGCACCACGTGTCAACTT
ATGGCAACCCTCGCTGGTTACAAATACAGACAAGAAGATTCGAATCCATG
GCAACCaccaaataaacaaaattgtGACGGTATCGATCTCATCTTCAAAG
ATTTCCATAAGGCAGGCTACACCACCCTATATAATGAAGATTTTGTTAGT
GGTAGTACCTTTCATTACAAAATGAACGGCTTCGACAAGCCCCCATCCGA
CTGGTATCCACGTCCCTACTGGATAGCTGCCCATGAACGGGTAGAAGGCT
GTGGGAGGCCTCCCTGTATTTGTGAAGACGAAGAAATGATCCGGTTCTTG
AAGACTTTCACAACGTTTTGTGAGCACGAAGCAAAATTTTCTATTCAAGT
GACAGCCAATGCGCATGATGACATGAATCTACTGTTTATGTTGGAAGATC
AACTCATTGAATTGTACGAGTTCTACAAAGAGAAAGCTCGCGTGGAAAAC
ACCATGTTAATTTTCTTTGGTGATCACGGTGCCCGTTGGGGTGCACGTGG
TAATTTCCGGAACACAAAGCAAGGTCGTTTAGAAGAATACAACCCGTTTT
ATTCACTCATTCTACCGCCTAACTTCAAAAAGAATTACAGAGAATTATAC
GATAATATTAAAGCTAATCAAAACGTTTTGACTTCGCATTTTGATGTTCA
CTGGACGTTAAAGCATATTTTGTCTTATCCGAAAATCGAGGAGAAGCGTA
ATTACGGACAAAGTTTATTCACAAAGATCGATCCCAAAACACGGACATGC
GATAAAACGGGAATCCCCggaaaatattgtttttgtttgtcaACAAAGAA
AATAGATGCAAATACCTCTCAAGCGAACACTATAGCTCAGACGGCTGTTG
ACTTTATAAACAAAAAGATAGCTGAACATGAGAAGCCAAAAGAGTTGTGT
GCTAATCTAACTCTCAGTCGAATCATAGACTTGGAATATGCTGCAGATGA
ACaaaaaaaCGAAGGAATTTTTTATATCATGTTCGAGGTTGCTCCGAGCA
AAGCGACTTTTGATGTTCGCGTACGTAAAGACTTAAGTAAACAGACGACT
TACGTTGACCCGGAAATCAGTCGGACTAACTTATATCGGAACCAACCGGC
ATGTATACAGGTAGCTTACCCAAAATTAGCACCTTTTTGTTATTGCAAAG
TGCAAACTAGTTAAAtggatttaaagaaaatttacacggttgttttgatt
ttggtacTGACTGTCGTTGTCACTTTGTACATGCAGTACAAAGAAGGTTT
CTTCAAAATTATCATGGATTCGTCACCTATGAGAAGCCCTATGTTAAGAC
CActtgatattttacagaacacTTCGTGGTCTGCAAAGTTCAAAGAAACT
ATTGCTTCTTTCAGAATGACTGAAAATTTAGCCACGGGGGACTCGAACGC
AACTGCTGTACCGTTGAAggtaattaaaaaattgaaactttcacaaaaag
aTATTATCAAGAGATATGAAGATCGGTTAAAACTTCGTAAAGACAGTTGG
GAGCATCACGAcgcggtctgtaaaatacctaATTTAAACCCGTTCGGGCC
GAGTGGGATGAAAGCATGGGCTACCAAAACGAAACAATATTGCGATATCA
AAAAGCTTGGAAAAATAGTCAAGAATAGATTCATAGTTGAGGACCCTGGA
AGCAAAATCAGCTTAGTAACCATGGAATATATTCTAAGAGGACGGAAACG
AAAGGCGGATGGTTCGTTGGACCCGCCCAAAGGGCGTACGTCCATGGTGA
TGGATAGTAAATACAGTTATCATAAGGTTTTGAACGATGACTTTCACGCA
CATTTCACCATCGCTTATAAAGTAATATTCAATAAAGAACGTGGTGTATT
CATGTCCAGTCCTCTGGAACATGATTTCTTTCGCGCTGTGATTACAATGA
AAACAGGCTCGAAAACCACTGAATACCACGCAACCATACACAACAAAGAT
GACGTGTGTCGCAAACATGGTCGTAAATTTGATCCTAAATCAAAAACAGG
ATTACCTCTCAACGTCCACATGTTTATGGTGGATGCAATCTCCAAAGGCA
ATGCTTACCGTCAGATGCCGAGATTGATGGAAATCCTAGAAGATGATGAA
GATGCAATGGTCTTTCAAGCTCACGGTATCCATGGTGATGGCACCACGTG
TCAACTTATGGCAACCCTCGCTGGTTACAAATACAGACAAGAAGATTCGA
ATCCATGGCAACCaccaaataaacaaaattgtGACGGTATCGATCTCATC
TTCAAAGATTTCCATAAGGCAGGCTACACCACCCTATATAATGAAGATTT
TGTTAGTGGTAGTACCTTTCATTACAAAATGAACGGCTTCGACAAGCCCC
CATCCGACTGGTATCCACGTCCCTACTGGATAGCTGCCCATGAACGGGTA
GAAGGCTGTGGGAGGCCTCCCTGTATTTGTGAAGACGAAGAAATGATCCG
GTTCTTGAAGACTTTCACAACGTTTTGTGAGCACGAAGCAAAATTTTCTA
TTCAAGTGACAGCCAATGCGCATGATGACATGAATCTACTGTTTATGTTG
GAAGATCAACTCATTGAATTGTACGAGTTCTACAAAGAGAAAGCTCGCGT
GGAAAACACCATGTTAATTTTCTTTGGTGATCACGGTGCCCGTTGGGGTG
CACGTGGTAATTTCCGGAACACAAAGCAAGGTCGTTTAGAAGAATACAAC
CCGTTTTATTCACTCATTCTACCGCCTAACTTCAAAAAGAATTACAGAGA
ATTATACGATAATATTAAAGCTAATCAAAACGTTTTGACTTCGCATTTTG
ATGTTCACTGGACGTTAAAGCATATTTTGTCTTATCCGAAAATCGAGGAG
AAGCGTAATTACGGACAAAGTTTATTCACAAAGATCGATCCCAAAACACG
GACATGCGATAAAACGGGAATCCCCggaaaatattgtttttgtttgtcaA
CAAAGAAAATAGATGCAAATACCTCTCAAGCGAACACTATAGCTCAGACG
GCTGTTGACTTTATAAACAAAAAGATAGCTGAACATGAGAAGCCAAAAGA
GTTGTGTGCTAATCTAACTCTCAGTCGAATCATAGACTTGGAATATGCTG
CAGATGAACaaaaaaaCGAAGGAATTTTTTATATCATGTTCGAGGTTGCT
CCGAGCAAAGCGACTTTTGATGTTCGCGTACGTAAAGACTTAAGTAAACA
GACGACTTACGTTGACCCGGAAATCAGTCGGACTAACTTATATCGGAACC
AACCGGCATGTATACAGGTAGCTTACCCAAAATTAGCACCTTTTTGTTAT
TGCAAAGTGCAAACTAGTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000071_pilon | genome | sc0000071_pilon:162702..166314 + |
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