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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073852 ID=TCONS_00073852|Name=TCONS_00073852|organism=Clytia hemisphaerica|type=transcript|length=518bp
TGCATCTGCTTGTGTCTTTGTTTTAGGTTATTTACGATTCAAATATTGGC
TTGAAAGTAGAAGAGCAAACATTGGTTCCCTCTCGCATCAAGAATGGAAA
GTTTCACACCCAAAAGCGCTACACGATCCAATTAGTGGAATATTTCCAAG
AAAATCATTGGAGGTATTTATTCGGACTTGAAATTTCTTACTGTAGCTGC
TTGATGCAGGCATTTTTTCAATTatcgggtcagggctggggtcgcttggc
tcattttctgaaaaatttgcttcgACCACCCATGATaatataccatattt
atgcttatcgACCATAGCCAGATGATTGTTTCCAAAATAATAGGCCATGG
CCAGCCCCCTCAAAAcgcttcacttttttcaaaatgccTGTGAACAAGCT
TTGGCCATTGATTGtagcatgaacatataaacgactggacatccatctcc
tttgtctttttgaagataacagtgctagcttcgttgccgcctcgttaaaa
gtataaaatgaaacaata Run BLAST on NCBI transcript from alignment at scaffold_99:19814..20674- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073852 ID=TCONS_00073852|Name=TCONS_00073852|organism=Clytia hemisphaerica|type=transcript|length=861bp|location=Sequence derived from alignment at scaffold_99:19814..20674- (Clytia hemisphaerica)
TGCATCTGCTTGTGTCTTTGTTTTAGGTTATTTACGATTCAAATATTGGC
TTGAAAGTAGAAGAGCAAACATTGGTTCCCTCTCGCATCAAGAATGGAAA
GTTTCACACCCAAAAGGTAGCGCCCTCGTGTGACGCCCTTCTGTGACGCC
CACTTTGAATTTGAAATCTGCCAATTTTTAGAAATTTGCCAACAAATAGG
ATTCGTATTGTGTTACTAGGTTCAACAGAGAAAAGTTTCTGATTTCCATT
TTTCAGCGATTTCAAAGTAGAAAATTTGATGAAAATTGACTTCTTAGAGA
TTCTGACTACGCTAACGTGCTGTTGTTTCTTTGGTTTAAAGTTGGAAGTT
AATAAATCAAAATAAGCGGTCTGGTCGCTAAAGGGTATAGGGAGATTGAT
TCTACTAAAATCATTTTTTGTCTCTTAAATATTTTTCTCGCTGTTTTTTT
ATTTGTCAGCGCTACACGATCCAATTAGTGGAATATTTCCAAGAAAATCA
TTGGAGGTATTTATTCGGACTTGAAATTTCTTACTGTAGCTGCTTGATGC
AGGCATTTTTTCAATTATCGGGTCAGGGCTGGGGTCGCTTGGCTCATTTT
CTGAAAAATTTGCTTCGACCACCCATGATAATATACCATATTTATGCTTA
TCGACCATAGCCAGATGATTGTTTCCAAAATAATAGGCCATGGCCAGCCC
CCTCAAAACGCTTCACTTTTTTCAAAATGCCTGTGAACAAGCTTTGGCCA
TTGATTGTAGCATGAACATATAAACGACTGGACATCCATCTCCTTTGTCT
TTTTGAAGATAACAGTGCTAGCTTCGTTGCCGCCTCGTTAAAAGTATAAA
ATGAAACAATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073852-exon-scaffold_99-1575043694:20559..20674 | TCONS_00073852-exon-scaffold_99-1575043694:20559..20674 | Clytia hemisphaerica | exon |
| TCONS_00073852-exon-scaffold_99-1575043694:19814..20215 | TCONS_00073852-exon-scaffold_99-1575043694:19814..20215 | Clytia hemisphaerica | exon |
| TCONS_00073852-exon-scaffold_99-1510915933:20559..20674 | TCONS_00073852-exon-scaffold_99-1510915933:20559..20674 | Clytia hemisphaerica | exon |
| TCONS_00073852-exon-scaffold_99-1510915933:19814..20215 | TCONS_00073852-exon-scaffold_99-1510915933:19814..20215 | Clytia hemisphaerica | exon |
| TCONS_00073852-exon-scaffold_99-1491911889:20559..20674 | TCONS_00073852-exon-scaffold_99-1491911889:20559..20674 | Clytia hemisphaerica | exon |
| TCONS_00073852-exon-scaffold_99-1491911889:19814..20215 | TCONS_00073852-exon-scaffold_99-1491911889:19814..20215 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_99 | supercontig | scaffold_99:19814..20674 - |
Blast
The following BLAST results are available for this feature:
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