TCONS_00073806 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073806
Unique NameTCONS_00073806
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2780

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073806 ID=TCONS_00073806|Name=TCONS_00073806|organism=Clytia hemisphaerica|type=transcript|length=2780bp
TGTCACAGACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATG
TTTCACAGCTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTAC
GATTTGGACATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCT
CCCTCTGAGTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACA
AAGCCTTCAATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGC
TCCGATGAAAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGC
AACTAAAATGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCG
AGACCATTGACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGC
AATGGATTGACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGAT
GAGCACTTCAATAACAACATCTATCAAAATCACTAATAAGGTGCTTCATC
CTTCAAACAAGACATTGATCAACACTTACCTACACTTTGGGCGTTGCGTC
GCCATCATTGACGATAAAGTCATCCTGCACTATGGTGAAGAATTGCAAAA
ATATTTCGATCATTTCGGTGTTGAGTTGGTGAATTTGATCCATGGTGGTA
ACGAGGTCGACAAAGATATCAAGAGCGTGGAGAAGATTTTAGTGCAGCTG
AAACAAAATGGTGTGTCGAGAAACGAACCTATCCTTATTGTTGGCGGGGG
CGTTATCTCAGATATTGGTGGTTTTGCAACCGCCCTTTATCATCGAAATA
CGCCCTACGTCATGTTGTGTACATCCATTGTATCTGGTATTGACGCCGGA
CCTTCACCCCGAACATGTTGTGATGGATTCGGGTTTAAGAATCTGTACGG
TGCATATCACCCGCCCATCTTGACGCTGACCGATCGTTCTTTCTTCAAAA
CACTTCATGAAGGCTGGATTCGACATGgAATCGCTGAGATTATCAAGATG
GCTGTTGTAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACC
TCGATTGATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAAT
TCGAAACGTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTT
CGTTCGGAATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGC
TTACGGCCATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTC
ACGGACACGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAG
TTGGAAAACTTCATCACGGCAGAGGAATGCAGCCGTATTTTACGTTTGAT
CAGTACAATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATT
TGGTTGCTGCCGCAAACACCAAGGTCATCGAGAAAAGAGGTGGCAATCTT
TGTGCACCAGTACCCAAAGAACTTGGTCAATGTGGTTACATCAACGAGTT
GTCACGTGATACCATTAACCAGACATTGGATGATTACAAAATGCTGTGTC
AGCAATTTCCACGATCAGGACGAGGAGTTGATGTACACTGTCGCGATGTA
GGGCTGGAAGATCCTTCTACTGTGGCAGGTTATGGAGTAAATGATGTTTT
GCAATCTAATGGTGCACCAAAGCATCCAAACGGAAGTGCAGAATCCAACC
CTCCGTCATCTTACTCCGAATGGATCAAAACGGTTCAAACAGAGCGGAAC
AGTGAATGGCAAATGAACGTCACTTTCCAAAAAGCCCTGGATACTGAATC
CCCTCCTGATTTCAATCACTTCAAATTGTTTCATGATGGCGTCGAAACAT
ACGCCATGGCTCAAACGACCATCCCTTCAAAAGGTGTCCAAAATATCGCC
AATTTGACGCAAAACAACGAAATGTTTTCTCCCTGCATGGTTGGTTCGCT
TGAGAGTCAATTCCTAAAAATGCAATGCCAAATCAAAGGAGCTCGCAACG
TGCTGGATGTCGGTACGTTTACTGGAATGTCTGCTTTGGCGATGGCTGAA
GGAATCCCCGATGATGGTCAAGTTGTCACTTTAGAATGTGATGAAAAAAT
TGCTGACGTTGCACAACAAGCTTTTTCAGCGTCGAAAGTCGGTCACAAGA
TCCGTCTCGAGTTAGGAAACGCCCTTCAAAGTATGAAGAAATTGGCAGCA
AACGGCCAGAAATTCGACGTCATTTTTCTTGACGCCGATAAAGAGAATTA
CATCCTTTACTACGATCTAGCCATGGATGAAGGAGTGTTAGCCGAAGGTG
GAATTATCTTAGCTGATAATGTGTTGTGTTCTCTTTTGTACGACAAGAAA
GATTTTCGAAGTCAGAAGCTTCACGAGTTCAACCAACATGTGAAGAATGA
CGATCGGGTGGAGCAAGTTGTTTTGACCGTACGGGAAGGGATCTCTATCA
TCAGAAGGCGTTAAATAAACCGCTCATTCATACAGACACATTCAGAgaag
aaattttagatttcaattACATATTCCAAACAACATTATTATTTTCAcgt
tattttttgtaaataattttttttgaaggttTCACCAAATTCTTGCATCA
GCATTTTTATGTCACTTCTTTTATCAAAGAACAGAAAAATTTTNTTCTTT
TCTTGCATCAGCATTTTTATGTCACTTCTTTTATCAAAGaacagaaaaat
tttgaattctaaATTTTGTAAATGATTTTCCTTTATATCTGAAGTAATCA
TTGTCAAGCAGTTAATAGGTTGTATTCTGT
Run BLAST on NCBI

transcript from alignment at scaffold_98:8005..17370-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073806 ID=TCONS_00073806|Name=TCONS_00073806|organism=Clytia hemisphaerica|type=transcript|length=9366bp|location=Sequence derived from alignment at scaffold_98:8005..17370- (Clytia hemisphaerica)
TGTCACAGACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATG TTTCACAGCTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTAC GATTTGGACATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCT CCCTCTGAGTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACA AAGCCTTCAATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGC TCCGATGAAAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGC AACTAAAATGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCG AGACCATTGACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGC AATGGATTGACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGAT GAGCACTTCAATAACAACATCTATCAAAATCACTAATAAGGTATGCGAAG ATCCTGTTTTGTCTTCTGCTCCAAGATATTCCTTTTTATATGTTTATTCC ATTTTATAGTATACTTCTATTCTTGATCAAGGCCAAATGATTTGTAAGTT ACCAAGTAAAACGATCCAAATTGCAAATACTTCTTCAAGTAGGTCTGATA TCTAAAGACAAAACACTTTTAACGGTTTAATAAGTGGTAGAGTCTAACGG CTGTGAACCCGTTTGTGAAATTTCTTGTACTGTACTTATTTCTTAGAAAT GGGGTATGTCTTGGACTATAGCATAGTCTAGTGCGTAAGGTGACCTTTTG TCTCTTAACTCGCCAGTTAAATGAGTTTGGGAGTTTGTTTGCTCCGTCTC TGGATTCTTCGGGAAGTGTCTTCTGTCTCCCGATCCCTAGCCTGGTTAAC CAAGCCGGTTTTTACAAGGCCAAGAAAGATACGGCTGAAGACCATATAGC ATTATCGGTGCTTTAATGATTTTTATGATGTACGGAATTTTAATTTTGCC TTGAAAAAACTGGCTTACGCGAAGCGCGCGTTCATATTTTGAACGCAGAA GTCGGTGAGACTCGGCGAGCATTTGGCCTCTTCTAATTGGTCATAATACA CCATGTGATAAGAAACGAAATTTTTCGTTTGTTTTGAAAACGCTTTTCAC TTCTCAACGAAAAACTTTTTAAACATATTTTATTCTGTACTTTTTGCATA AAAAGAAAGATATGTTTTTCTCTCTCCCTCTTTTAATTTGCAAAACCTTT ATATAACTGAATGAAAGAGAAGTTCATTAAATAGGGAGGAGGGTGTGTTT ATTTAACAAATTCCTTATTTTTATANNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNTTTTTTTGCTTGGAAAAGCTTGAAGCACTCAATCTAGCCCTTC GGGATTTACAGAAATCTGTACCGTTACCGTAGCTGCGGCAGACCATGAAG GTCAAGGTGTCTTAACAATGTGTTGACTGACTAATGTCGTTCTTTGGGAA GTTGTAATATCGCCGCATTTTTCTTTAACAGAGATTGCACGGGTCAAAGT TACGAAATATGAGCAATGAGGCATTTTACTCCAAAACAGATTTTGACACA TCATGTCAAAAGCTAGTAATTTGACCTGATAATCGAATCAAAAATGAGAA ATCAAGTATTTGAAAACTCCCAAAATGGGAAATTAAACAAAGAGTGCCTC TGCTGTATTTGAAAGATGACGTAAGATGAGAAAGAAAAGTACTATCCTAC ACAACAGGGAATATATAATAGTTCCTGTGTTGTTATAAAGAAACTCGTGT TAGGTCAAATAGGACGACACTGCATTTACTAGTCGAAGATTCAGGCCCGA GAATATCCAGGAATTAAGTTTTTTTGAACTGCCAATTTATTTTGTCACCC AGGTAATAAAGGGTTTTAAGCATCACAGGGGCAGATTTGAATTGTCTTTA ATAAAAATTGCAGTTAAAGCCTTCGTAATTTCACAAGCACCATGCTTGTG TAATCAAAGTAATTGCCATTGAAGTTAAGCCTAATTTTGGCCCAAACGCT GGGAAACCAGGTTAGAAGCTGGTAACATCGTGTATAAGCGGTTTGCATTT GAATTACCAATTGTTCATCTCTCAGGTGCTTCATCCTTCAAACAAGACAT TGATCAACACTTACCTACACTTTGGGCGTTGCGTCGCCATCATTGACGAT AAAGTCATCCTGCACTATGGTGAAGAATTGCAAAAATATTTCGATCATTT CGGTGTTGAGTTGGTGAATTTGATCCATGGTGGTAACGAGGTCGACAAAG ATATCAAGAGCGTGGAGAAGATTTTAGTGCAGCTGAAACAAAATGGTGTG TCGAGAAACGAACCTATCCTTATTGTTGGCGGGGGCGTTATCTCAGATAT TGGTGGTTTTGCAACCGCCCTTTATCATCGAAATACGCCCTACGTCATGT TGTGTACATCCATTGTATCTGGTATTGACGCCGGACCTTCACCCCGAACA TGTTGTGATGGATTCGGGTTTAAGAATCTGTACGGTGCATATCACCCGCC CATCTTGACGCTGACCGATCGTTCTTTCTTCAAAACACTTCATGAAGGCT GGATTCGACATGGTGAGTCATTGAAATACTTTTCATTATTCCTTATAGTT TTCTTCTATATGCCGCATCTGTATTCGATATATTAACGAACTTTCCTACT TTCAGCTACATAAAAACAACGAAAAGAGCATGATTTATTTTGAAATTAAC TTATTGTTTAAAACAGCATTGACAAATTTAATATGCACTCCCTAAAGACC GTCATCAATCTTGAAAGTGCAGTCAGTCGTCACAAATAATGATTATTTCC AATGACGTTGAAGTGTCTTGGCAAAAATAGGCTGCTACCCCTCTTTCGGT CCCTCTTAGAGAATGAAGTCCTCTGAAAATTGGACCTGTAAGACTCTTTT GTATTTTGAAATGAGCGTATTTTGAGAAAAAGTCAGAAAGGAGGAAAAAA TCCCTAACTATTTTCCATTTTTTCAGGAATCGCTGAGATTATCAAGATGG CTGTTGTAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCT CGATTGATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATT CGAAACGTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTC GTTCGGAATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCT TACGGCCATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCA CGGACACGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGT TGGAAAACTTCATCACGGCAGAGGAATGCAGCCGTATTTTACGTTTGATC AGTACAATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTT GGTTGCTGCCGCAAACACCAAGGTCATNTCATTATTCCTTATAGTTTTCT TCTATATGCCGCATCTGTATTCGATATATTAACGAACTTTCCTACTTTCA GCTACATAAAAACAATGAAAAGAGCATGATTTATTTTGAAATTAACTTAT TGTTTAAAACAGCATTGACAAATTTAATATGCACTCCCTAAAGACCGTCA TCAATCTTGAAAGTGCAGTCAGTCGTCACAAATAATGATTATTTCCAATG ACGTTGAAGTGTCTTGGCAAAAATAGGCTGCTACCCCTCTTTCGGTCCCT CTTAGAGAATGAAGTCCTCTGAAAATTGGACCTGTAAGACTCTTTTGTAT TTTGAAATGAGCGTATTTTGAGAAAAAGTCAGAAAGGAGGAAAAAATCCC TAACTATTTTCCATTTTTTCAGGAATCGCTGAGATTATCAAGATGGCTGT TGTAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTCGAT TGATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTCGAA ACGTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCGTTC GGAATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTTACG GCCATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCACGGA CACGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTTGGA AAACTTCATCACGGCAGAAGAATGCAGCCGTATTTTACGTTTGATCAGTA CAATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTGGTT GCTGCCGCAAACACCAAGGTCATCGAGAAAAGAGGTAGGCTTTATGTTAG AAAGAAAGTGTATTGTGTCTTTAAACATGGTGTGCGAGCGTTGCACATTT GCAAAACAGACTATAAAACCACAGATATCTAAGCCCGAAGGGCTAGATAG GCAACTTTAAGCTTTCTCCAGCAAAAAAAAGTGAAGCAAAAATTTGACTT TTTAAATTTCGTGCCGATGGATAGGATCTAGCATTTTAATTGTTTTCGGA GCGCGAGATCAAAAACGTAGGCGAAAAACGCTATTTCACATCTCTCAAAC CGGTGAAATTGCATATTTTAGTCACGTGACTCTGGTAGGAAATCCTTCCA AAGATGAGCTTCACTTTTTGATAAAAGCCGCAAATCTAGCCCTTCGGGCT TTACAGATATCTGTGTATAAAACAACATAAGGTTTCGATGGCCAACATAT TTAGAACAAGTGAAGGACAATTTAAGCTTTAATGGACTCTAAAACACCCA ATTTTTTAGAAAATCTAACAAAAATAATCACAAAATGGATGAAATTAAGA ACAATTTTTGCCTTACAGCATAAAAGGCTAAGAACATCCAAAAACAAACA CTCAGTTTAAGCCTGTGGTGGCTGTTTGCGACAGCTAAAGTGAGATTAAT ATTGCAAACCACAATATAATGATAGTTATTTTGTTATCAAAGGTAATAAA CAGAGAAACAAACGCTAAGAGGGATAAAATTTCGAGCAATTGTTGTTGCT GAGAAAATTGATTATATATTTCGCTCGCTCGATTGTTTTTCTAGAGCTCA AAACTAGAGTAACATTTTGATAGATTTTATTTATTTCGAAAGTTATGCAA CTGTATTTTTTATCTCTCTCGTGGGTCTTGTCAATGCAATTATGTGATTA CTTCAAAAAGCATTTTACTAAGGAATGAGCTTCGTGAAAATTCTGATCGA GGTGAGAGAGAGAATGTAGCATGTTTGAGACAAGGCATTCGTTGAGAGAA TATTTATCGAAATTTTTTTCTGTTTAATTCTAAAGATTCTTTTGCAACTT TCTCCTGCTACAAAACAAATCTGGCTCTAAATATTTTCTGTTATACTGGT GGCGAAGTCTAGATTACCATACATACCCCCTTCTCACAACGTTTTGAAGT GACACAATCATAAACTGATTATCTAAAAAATTGTTTCATCTCTAAAACAT TCTTTGAGAACGTTTATCCATCCTACGATACAGAAGTGGTTCGAAATTTA TGACAATCGTCATCCTACTTTCCCAATTTCGAACAAAATATTTTTTTCAC CACCCCTGTATCAATCACTTAAACTTGTTTTGGGTTACAAAGGTGTAACT CGTTAATTTACAGTCAAAAATATTGAATCCTTCTAATGATATTGTATCTT TCTCATCTCACAGGTGGCAATCTTTGTGCACCAGTACCCAAAGAACTTGG TCAATGTGGTTACATCAACGAGTTGTCACGTGATACCATTAACCAGACAT TGGATGATTACAAAATGCTGTGTCAGCAATTTCCACGATCAGGACGAGGA GTTGATGTACACTGTCGCGATGTAGGGCTGGAAGATCCTTCTACTGTGGC AGGTTATGGAGTAAATGATGTTTTGCAATCTAATGGTGCACCAAAGGTAT GTTTCTTTCTTTGATTTCAATGCTTTTAGAAACTGAAAAACTTCCAATTA AACGCAACACTAATTTAATTCAATCGGTTCTTCATGATCGCGATTCTTAA GTTTTGTTTACTTCTCAGTTCTATTTTCTATTAAATCCATGGTCAAACAC TAGTCTATGAACCACTGAAATTGTGTCAAGATCGGAATAAAAAAGTATAG CAAAATATAGAAATTTGGGCTATTTTGCAGTCCTCCTTTGGTGTTTACTG CTTCTTCCAAAGAATGATGATGATGGTCATTTTATGAAAAAATAGTTAAA TTTTGTCGATTTAGCCTTTAAATATTCTGCATAAAAAGTATTTTTCTTGT TCTTATAGCATCCAAACGGAAGTGCAGAATCCAACCCTCCGTCATCTTAC TCCGAATGGATCAAAACGGTTCAAACAGAGCGGAACAGTGAATGGCAAAT GAACGTCACTTTCCAAAAAGCCCTGGATACTGAATCCCCTCCTGATTTCA ATCACTTCAAATTGTTTCATGATGGCGTCGAAACATACGCCATGGCTCAA ACGACCATCCCTTCAAAAGGTGTCCAAAATATCGCCAATTTGACGCAAAA CAACGAAATGTTTTCTCCCTGCATGGTTGGTTCGCTTGAGAGTCAATTCC TAAAAATGCAATGCCAAATCAAAGGAGCTCGCAACGTGCTGGATGTCGGT ACGTTTACTGGAATGTCTGCTTTGGCGATGGCTGAAGGAATCCCCGATGA TGGTCAAGTTGTCACTTTAGAATGTGATGAAAAAATTGCTGACGTTGCAC AACAAGCTTTTTCAGCGTCGAAAGTCGGTCACAAGATCCGTCTCGAGTTA GGAAACGCCCTTCAAAGTATGAAGAAATTGGCAGCAAACGGCCAGAAATT CGACGTCATTTTTCTTGACGCCGATAAAGAGAATTACATCCTTTACTACG ATCTAGCCATGGATGAAGGAGTGTTAGCCGAAGGTGGAATTATCTTAGCT GATAATGTGTTGTGTTCTCTTTTGTACGACAAGAAAGATTTTCGAAGTCA GAAGCTTCACGAGTTCAACCAACATGTGAAGAATGACGATCGGGTGGAGC AAGTTGTTTTGACCGTACGGGAAGGGATCTCTATCATCAGAAGGCGTTAA ATAAACCGCTCATTCATACAGACACATTCAGAGAAGAAATTTTAGATTTC AATTACATATTCCAAACAACATTATTATTTTCACGTTATTTTTTGTAAAT AATTTTTTTTGAAGGTTTCACCAAATTCTTGCATCAGCATTTTTATGTCA CTTCTTTTATCAAAGAACAGAAAAATTTTNTTCTTTTCTTGCATCAGCAT TTTTATGTCACTTCTTTTATCAAAGAACAGAAAAATTTTGAATTCTAAAT TTTGTAAATGATTTTCCTTTATATCTGAAGTAATCATTGTCAAGCAGTTA ATAGGTTGTATTCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045842XLOC_045842Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073806-exon-scaffold_98-1575043694:16881..17370TCONS_00073806-exon-scaffold_98-1575043694:16881..17370Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1575043694:12809..13295TCONS_00073806-exon-scaffold_98-1575043694:12809..13295Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1575043694:11949..12394TCONS_00073806-exon-scaffold_98-1575043694:11949..12394Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1575043694:11087..11102TCONS_00073806-exon-scaffold_98-1575043694:11087..11102Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1575043694:9475..9707TCONS_00073806-exon-scaffold_98-1575043694:9475..9707Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1575043694:8005..9112TCONS_00073806-exon-scaffold_98-1575043694:8005..9112Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1510915933:16881..17370TCONS_00073806-exon-scaffold_98-1510915933:16881..17370Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1510915933:12809..13295TCONS_00073806-exon-scaffold_98-1510915933:12809..13295Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1510915933:11949..12394TCONS_00073806-exon-scaffold_98-1510915933:11949..12394Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1510915933:11087..11102TCONS_00073806-exon-scaffold_98-1510915933:11087..11102Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1510915933:9475..9707TCONS_00073806-exon-scaffold_98-1510915933:9475..9707Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1510915933:8005..9112TCONS_00073806-exon-scaffold_98-1510915933:8005..9112Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1491911889:16881..17370TCONS_00073806-exon-scaffold_98-1491911889:16881..17370Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1491911889:12809..13295TCONS_00073806-exon-scaffold_98-1491911889:12809..13295Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1491911889:11949..12394TCONS_00073806-exon-scaffold_98-1491911889:11949..12394Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1491911889:11087..11102TCONS_00073806-exon-scaffold_98-1491911889:11087..11102Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1491911889:9475..9707TCONS_00073806-exon-scaffold_98-1491911889:9475..9707Clytia hemisphaericaexon
TCONS_00073806-exon-scaffold_98-1491911889:8005..9112TCONS_00073806-exon-scaffold_98-1491911889:8005..9112Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_98supercontigscaffold_98:8005..17370 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000950907 0.0061114 3.52082e-06 6.81951e-06 0 0 0 0 0 0 0 0 0.0243104 2.55461e-09 0.297168 1.10648 0.000143005 0.00253657 0.28472 0.140139 0.0151094 0.00283574 0 0 5.95445e-08 3.00222e-07 0 0 0 0.000423796
Blast
BLAST of TCONS_00073806 vs. Swiss-Prot (Human)
Match: CMTD1 (Catechol O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.778e-18
Identity = 60/173 (34.68%), Postives = 96/173 (55.49%), Query Frame = 2
Query: 1937 MVGSLESQFLKMQCQIKGARNVLDVGTFTGMSALAMAEGIPDDGQVVTLECDEKIADVAQQAFSASKVGHKIRLELGNALQSMKKLAANGQ--KFDVIFLDADKENYILYYDLAMDEGVLAEGGIILADNVLCS---LLYDKKDFRSQKLHEFNQHVKNDDRVEQVVLTVREG 2440
            M+   ++Q L    ++  A+  LD+GTFTG SALA+A  +P DG+VVT E D +  ++ +  +  ++  HKI L L  AL+++ +L A G+   FDV  +DADKEN   YY+  +   +L  GGI+    VL     L   K D  ++ +   N+ ++ D RV   +L + +G
Sbjct:   85 MMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQ--LLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDG 255          
The following BLAST results are available for this feature:
BLAST of TCONS_00073806 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CMTD15.778e-1834.68Catechol O-methyltransferase domain-containing pro... [more]
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