TCONS_00073805 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073805
Unique NameTCONS_00073805
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2778

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073805 ID=TCONS_00073805|Name=TCONS_00073805|organism=Clytia hemisphaerica|type=transcript|length=2778bp
TCACAGACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATGTT
TCACAGCTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTACGA
TTTGGACATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCTCC
CTCTGAGTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACAAA
GCCTTCAATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGCTC
CGATGAAAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGCAA
CTAAAATGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCGAG
ACCATTGACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGCAA
TGGATTGACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGATGA
GCACTTCAATAACAACATCTATCAAAATCACTAATAAGGTGCTTCATCCT
TCAAACAAGACATTGATCAACACTTACCTACACTTTGGGCGTTGCGTCGC
CATCATTGACGATAAAGTCATCCTGCACTATGGTGAAGAATTGCAAAAAT
ATTTCGATCATTTCGGTGTTGAGTTGGTGAATTTGATCCATGGTGGTAAC
GAGGTCGACAAAGATATCAAGAGCGTGGAGAAGATTTTAGTGCAGCTGAA
ACAAAATGGTGTGTCGAGAAACGAACCTATCCTTATTGTTGGCGGGGGCG
TTATCTCAGATATTGGTGGTTTTGCAACCGCCCTTTATCATCGAAATACG
CCCTACGTCATGTTGTGTACATCCATTGTATCTGGTATTGACGCCGGACC
TTCACCCCGAACATGTTGTGATGGATTCGGGTTTAAGAATCTGTACGGTG
CATATCACCCGCCCATCTTGACGCTGACCGATCGTTCTTTCTTCAAAACA
CTTCATGAAGGCTGGATTCGACATGgAATCGCTGAGATTATCAAGATGGC
TGTTGTAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTC
GATTGATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTC
GAAACGTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCG
TTCGGAATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTT
ACGGCCATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCAC
GGACACGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTT
GGAAAACTTCATCACGGCAGAAGAATGCAGCCGTATTTTACGTTTGATCA
GTACAATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTG
GTTGCTGCCGCAAACACCAAGGTCATCGAGAAAAGAGGTGGCAATCTTTG
TGCACCAGTACCCAAAGAACTTGGTCAATGTGGTTACATCAACGAGTTGT
CACGTGATACCATTAACCAGACATTGGATGATTACAAAATGCTGTGTCAG
CAATTTCCACGATCAGGACGAGGAGTTGATGTACACTGTCGCGATGTAGG
GCTGGAAGATCCTTCTACTGTGGCAGGTTATGGAGTAAATGATGTTTTGC
AATCTAATGGTGCACCAAAGCATCCAAACGGAAGTGCAGAATCCAACCCT
CCGTCATCTTACTCCGAATGGATCAAAACGGTTCAAACAGAGCGGAACAG
TGAATGGCAAATGAACGTCACTTTCCAAAAAGCCCTGGATACTGAATCCC
CTCCTGATTTCAATCACTTCAAATTGTTTCATGATGGCGTCGAAACATAC
GCCATGGCTCAAACGACCATCCCTTCAAAAGGTGTCCAAAATATCGCCAA
TTTGACGCAAAACAACGAAATGTTTTCTCCCTGCATGGTTGGTTCGCTTG
AGAGTCAATTCCTAAAAATGCAATGCCAAATCAAAGGAGCTCGCAACGTG
CTGGATGTCGGTACGTTTACTGGAATGTCTGCTTTGGCGATGGCTGAAGG
AATCCCCGATGATGGTCAAGTTGTCACTTTAGAATGTGATGAAAAAATTG
CTGACGTTGCACAACAAGCTTTTTCAGCGTCGAAAGTCGGTCACAAGATC
CGTCTCGAGTTAGGAAACGCCCTTCAAAGTATGAAGAAATTGGCAGCAAA
CGGCCAGAAATTCGACGTCATTTTTCTTGACGCCGATAAAGAGAATTACA
TCCTTTACTACGATCTAGCCATGGATGAAGGAGTGTTAGCCGAAGGTGGA
ATTATCTTAGCTGATAATGTGTTGTGTTCTCTTTTGTACGACAAGAAAGA
TTTTCGAAGTCAGAAGCTTCACGAGTTCAACCAACATGTGAAGAATGACG
ATCGGGTGGAGCAAGTTGTTTTGACCGTACGGGAAGGGATCTCTATCATC
AGAAGGCGTTAAATAAACCGCTCATTCATACAGACACATTCAGAgaagaa
attttagatttcaattACATATTCCAAACAACATTATTATTTTCAcgtta
ttttttgtaaataattttttttgaaggttTCACCAAATTCTTGCATCAGC
ATTTTTATGTCACTTCTTTTATCAAAGAACAGAAAAATTTTNTTCTTTTC
TTGCATCAGCATTTTTATGTCACTTCTTTTATCAAAGaacagaaaaattt
tgaattctaaATTTTGTAAATGATTTTCCTTTATATCTGAAGTAATCATT
GTCAAGCAGTTAATAGGTTGTATTCTGT
Run BLAST on NCBI

transcript from alignment at scaffold_98:8005..17368-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073805 ID=TCONS_00073805|Name=TCONS_00073805|organism=Clytia hemisphaerica|type=transcript|length=9364bp|location=Sequence derived from alignment at scaffold_98:8005..17368- (Clytia hemisphaerica)
TCACAGACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATGTT
TCACAGCTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTACGA
TTTGGACATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCTCC
CTCTGAGTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACAAA
GCCTTCAATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGCTC
CGATGAAAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGCAA
CTAAAATGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCGAG
ACCATTGACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGCAA
TGGATTGACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGATGA
GCACTTCAATAACAACATCTATCAAAATCACTAATAAGGTATGCGAAGAT
CCTGTTTTGTCTTCTGCTCCAAGATATTCCTTTTTATATGTTTATTCCAT
TTTATAGTATACTTCTATTCTTGATCAAGGCCAAATGATTTGTAAGTTAC
CAAGTAAAACGATCCAAATTGCAAATACTTCTTCAAGTAGGTCTGATATC
TAAAGACAAAACACTTTTAACGGTTTAATAAGTGGTAGAGTCTAACGGCT
GTGAACCCGTTTGTGAAATTTCTTGTACTGTACTTATTTCTTAGAAATGG
GGTATGTCTTGGACTATAGCATAGTCTAGTGCGTAAGGTGACCTTTTGTC
TCTTAACTCGCCAGTTAAATGAGTTTGGGAGTTTGTTTGCTCCGTCTCTG
GATTCTTCGGGAAGTGTCTTCTGTCTCCCGATCCCTAGCCTGGTTAACCA
AGCCGGTTTTTACAAGGCCAAGAAAGATACGGCTGAAGACCATATAGCAT
TATCGGTGCTTTAATGATTTTTATGATGTACGGAATTTTAATTTTGCCTT
GAAAAAACTGGCTTACGCGAAGCGCGCGTTCATATTTTGAACGCAGAAGT
CGGTGAGACTCGGCGAGCATTTGGCCTCTTCTAATTGGTCATAATACACC
ATGTGATAAGAAACGAAATTTTTCGTTTGTTTTGAAAACGCTTTTCACTT
CTCAACGAAAAACTTTTTAAACATATTTTATTCTGTACTTTTTGCATAAA
AAGAAAGATATGTTTTTCTCTCTCCCTCTTTTAATTTGCAAAACCTTTAT
ATAACTGAATGAAAGAGAAGTTCATTAAATAGGGAGGAGGGTGTGTTTAT
TTAACAAATTCCTTATTTTTATANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTTTTTTGCTTGGAAAAGCTTGAAGCACTCAATCTAGCCCTTCGG
GATTTACAGAAATCTGTACCGTTACCGTAGCTGCGGCAGACCATGAAGGT
CAAGGTGTCTTAACAATGTGTTGACTGACTAATGTCGTTCTTTGGGAAGT
TGTAATATCGCCGCATTTTTCTTTAACAGAGATTGCACGGGTCAAAGTTA
CGAAATATGAGCAATGAGGCATTTTACTCCAAAACAGATTTTGACACATC
ATGTCAAAAGCTAGTAATTTGACCTGATAATCGAATCAAAAATGAGAAAT
CAAGTATTTGAAAACTCCCAAAATGGGAAATTAAACAAAGAGTGCCTCTG
CTGTATTTGAAAGATGACGTAAGATGAGAAAGAAAAGTACTATCCTACAC
AACAGGGAATATATAATAGTTCCTGTGTTGTTATAAAGAAACTCGTGTTA
GGTCAAATAGGACGACACTGCATTTACTAGTCGAAGATTCAGGCCCGAGA
ATATCCAGGAATTAAGTTTTTTTGAACTGCCAATTTATTTTGTCACCCAG
GTAATAAAGGGTTTTAAGCATCACAGGGGCAGATTTGAATTGTCTTTAAT
AAAAATTGCAGTTAAAGCCTTCGTAATTTCACAAGCACCATGCTTGTGTA
ATCAAAGTAATTGCCATTGAAGTTAAGCCTAATTTTGGCCCAAACGCTGG
GAAACCAGGTTAGAAGCTGGTAACATCGTGTATAAGCGGTTTGCATTTGA
ATTACCAATTGTTCATCTCTCAGGTGCTTCATCCTTCAAACAAGACATTG
ATCAACACTTACCTACACTTTGGGCGTTGCGTCGCCATCATTGACGATAA
AGTCATCCTGCACTATGGTGAAGAATTGCAAAAATATTTCGATCATTTCG
GTGTTGAGTTGGTGAATTTGATCCATGGTGGTAACGAGGTCGACAAAGAT
ATCAAGAGCGTGGAGAAGATTTTAGTGCAGCTGAAACAAAATGGTGTGTC
GAGAAACGAACCTATCCTTATTGTTGGCGGGGGCGTTATCTCAGATATTG
GTGGTTTTGCAACCGCCCTTTATCATCGAAATACGCCCTACGTCATGTTG
TGTACATCCATTGTATCTGGTATTGACGCCGGACCTTCACCCCGAACATG
TTGTGATGGATTCGGGTTTAAGAATCTGTACGGTGCATATCACCCGCCCA
TCTTGACGCTGACCGATCGTTCTTTCTTCAAAACACTTCATGAAGGCTGG
ATTCGACATGGTGAGTCATTGAAATACTTTTCATTATTCCTTATAGTTTT
CTTCTATATGCCGCATCTGTATTCGATATATTAACGAACTTTCCTACTTT
CAGCTACATAAAAACAACGAAAAGAGCATGATTTATTTTGAAATTAACTT
ATTGTTTAAAACAGCATTGACAAATTTAATATGCACTCCCTAAAGACCGT
CATCAATCTTGAAAGTGCAGTCAGTCGTCACAAATAATGATTATTTCCAA
TGACGTTGAAGTGTCTTGGCAAAAATAGGCTGCTACCCCTCTTTCGGTCC
CTCTTAGAGAATGAAGTCCTCTGAAAATTGGACCTGTAAGACTCTTTTGT
ATTTTGAAATGAGCGTATTTTGAGAAAAAGTCAGAAAGGAGGAAAAAATC
CCTAACTATTTTCCATTTTTTCAGGAATCGCTGAGATTATCAAGATGGCT
GTTGTAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTCG
ATTGATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTCG
AAACGTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCGT
TCGGAATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTTA
CGGCCATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCACG
GACACGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTTG
GAAAACTTCATCACGGCAGAGGAATGCAGCCGTATTTTACGTTTGATCAG
TACAATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTGG
TTGCTGCCGCAAACACCAAGGTCATNTCATTATTCCTTATAGTTTTCTTC
TATATGCCGCATCTGTATTCGATATATTAACGAACTTTCCTACTTTCAGC
TACATAAAAACAATGAAAAGAGCATGATTTATTTTGAAATTAACTTATTG
TTTAAAACAGCATTGACAAATTTAATATGCACTCCCTAAAGACCGTCATC
AATCTTGAAAGTGCAGTCAGTCGTCACAAATAATGATTATTTCCAATGAC
GTTGAAGTGTCTTGGCAAAAATAGGCTGCTACCCCTCTTTCGGTCCCTCT
TAGAGAATGAAGTCCTCTGAAAATTGGACCTGTAAGACTCTTTTGTATTT
TGAAATGAGCGTATTTTGAGAAAAAGTCAGAAAGGAGGAAAAAATCCCTA
ACTATTTTCCATTTTTTCAGGAATCGCTGAGATTATCAAGATGGCTGTTG
TAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTCGATTG
ATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTCGAAAC
GTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCGTTCGG
AATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTTACGGC
CATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCACGGACA
CGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTTGGAAA
ACTTCATCACGGCAGAAGAATGCAGCCGTATTTTACGTTTGATCAGTACA
ATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTGGTTGC
TGCCGCAAACACCAAGGTCATCGAGAAAAGAGGTAGGCTTTATGTTAGAA
AGAAAGTGTATTGTGTCTTTAAACATGGTGTGCGAGCGTTGCACATTTGC
AAAACAGACTATAAAACCACAGATATCTAAGCCCGAAGGGCTAGATAGGC
AACTTTAAGCTTTCTCCAGCAAAAAAAAGTGAAGCAAAAATTTGACTTTT
TAAATTTCGTGCCGATGGATAGGATCTAGCATTTTAATTGTTTTCGGAGC
GCGAGATCAAAAACGTAGGCGAAAAACGCTATTTCACATCTCTCAAACCG
GTGAAATTGCATATTTTAGTCACGTGACTCTGGTAGGAAATCCTTCCAAA
GATGAGCTTCACTTTTTGATAAAAGCCGCAAATCTAGCCCTTCGGGCTTT
ACAGATATCTGTGTATAAAACAACATAAGGTTTCGATGGCCAACATATTT
AGAACAAGTGAAGGACAATTTAAGCTTTAATGGACTCTAAAACACCCAAT
TTTTTAGAAAATCTAACAAAAATAATCACAAAATGGATGAAATTAAGAAC
AATTTTTGCCTTACAGCATAAAAGGCTAAGAACATCCAAAAACAAACACT
CAGTTTAAGCCTGTGGTGGCTGTTTGCGACAGCTAAAGTGAGATTAATAT
TGCAAACCACAATATAATGATAGTTATTTTGTTATCAAAGGTAATAAACA
GAGAAACAAACGCTAAGAGGGATAAAATTTCGAGCAATTGTTGTTGCTGA
GAAAATTGATTATATATTTCGCTCGCTCGATTGTTTTTCTAGAGCTCAAA
ACTAGAGTAACATTTTGATAGATTTTATTTATTTCGAAAGTTATGCAACT
GTATTTTTTATCTCTCTCGTGGGTCTTGTCAATGCAATTATGTGATTACT
TCAAAAAGCATTTTACTAAGGAATGAGCTTCGTGAAAATTCTGATCGAGG
TGAGAGAGAGAATGTAGCATGTTTGAGACAAGGCATTCGTTGAGAGAATA
TTTATCGAAATTTTTTTCTGTTTAATTCTAAAGATTCTTTTGCAACTTTC
TCCTGCTACAAAACAAATCTGGCTCTAAATATTTTCTGTTATACTGGTGG
CGAAGTCTAGATTACCATACATACCCCCTTCTCACAACGTTTTGAAGTGA
CACAATCATAAACTGATTATCTAAAAAATTGTTTCATCTCTAAAACATTC
TTTGAGAACGTTTATCCATCCTACGATACAGAAGTGGTTCGAAATTTATG
ACAATCGTCATCCTACTTTCCCAATTTCGAACAAAATATTTTTTTCACCA
CCCCTGTATCAATCACTTAAACTTGTTTTGGGTTACAAAGGTGTAACTCG
TTAATTTACAGTCAAAAATATTGAATCCTTCTAATGATATTGTATCTTTC
TCATCTCACAGGTGGCAATCTTTGTGCACCAGTACCCAAAGAACTTGGTC
AATGTGGTTACATCAACGAGTTGTCACGTGATACCATTAACCAGACATTG
GATGATTACAAAATGCTGTGTCAGCAATTTCCACGATCAGGACGAGGAGT
TGATGTACACTGTCGCGATGTAGGGCTGGAAGATCCTTCTACTGTGGCAG
GTTATGGAGTAAATGATGTTTTGCAATCTAATGGTGCACCAAAGGTATGT
TTCTTTCTTTGATTTCAATGCTTTTAGAAACTGAAAAACTTCCAATTAAA
CGCAACACTAATTTAATTCAATCGGTTCTTCATGATCGCGATTCTTAAGT
TTTGTTTACTTCTCAGTTCTATTTTCTATTAAATCCATGGTCAAACACTA
GTCTATGAACCACTGAAATTGTGTCAAGATCGGAATAAAAAAGTATAGCA
AAATATAGAAATTTGGGCTATTTTGCAGTCCTCCTTTGGTGTTTACTGCT
TCTTCCAAAGAATGATGATGATGGTCATTTTATGAAAAAATAGTTAAATT
TTGTCGATTTAGCCTTTAAATATTCTGCATAAAAAGTATTTTTCTTGTTC
TTATAGCATCCAAACGGAAGTGCAGAATCCAACCCTCCGTCATCTTACTC
CGAATGGATCAAAACGGTTCAAACAGAGCGGAACAGTGAATGGCAAATGA
ACGTCACTTTCCAAAAAGCCCTGGATACTGAATCCCCTCCTGATTTCAAT
CACTTCAAATTGTTTCATGATGGCGTCGAAACATACGCCATGGCTCAAAC
GACCATCCCTTCAAAAGGTGTCCAAAATATCGCCAATTTGACGCAAAACA
ACGAAATGTTTTCTCCCTGCATGGTTGGTTCGCTTGAGAGTCAATTCCTA
AAAATGCAATGCCAAATCAAAGGAGCTCGCAACGTGCTGGATGTCGGTAC
GTTTACTGGAATGTCTGCTTTGGCGATGGCTGAAGGAATCCCCGATGATG
GTCAAGTTGTCACTTTAGAATGTGATGAAAAAATTGCTGACGTTGCACAA
CAAGCTTTTTCAGCGTCGAAAGTCGGTCACAAGATCCGTCTCGAGTTAGG
AAACGCCCTTCAAAGTATGAAGAAATTGGCAGCAAACGGCCAGAAATTCG
ACGTCATTTTTCTTGACGCCGATAAAGAGAATTACATCCTTTACTACGAT
CTAGCCATGGATGAAGGAGTGTTAGCCGAAGGTGGAATTATCTTAGCTGA
TAATGTGTTGTGTTCTCTTTTGTACGACAAGAAAGATTTTCGAAGTCAGA
AGCTTCACGAGTTCAACCAACATGTGAAGAATGACGATCGGGTGGAGCAA
GTTGTTTTGACCGTACGGGAAGGGATCTCTATCATCAGAAGGCGTTAAAT
AAACCGCTCATTCATACAGACACATTCAGAGAAGAAATTTTAGATTTCAA
TTACATATTCCAAACAACATTATTATTTTCACGTTATTTTTTGTAAATAA
TTTTTTTTGAAGGTTTCACCAAATTCTTGCATCAGCATTTTTATGTCACT
TCTTTTATCAAAGAACAGAAAAATTTTNTTCTTTTCTTGCATCAGCATTT
TTATGTCACTTCTTTTATCAAAGAACAGAAAAATTTTGAATTCTAAATTT
TGTAAATGATTTTCCTTTATATCTGAAGTAATCATTGTCAAGCAGTTAAT
AGGTTGTATTCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045842XLOC_045842Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073805-exon-scaffold_98-1575043694:16881..17368TCONS_00073805-exon-scaffold_98-1575043694:16881..17368Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1575043694:12809..13295TCONS_00073805-exon-scaffold_98-1575043694:12809..13295Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1575043694:11087..11548TCONS_00073805-exon-scaffold_98-1575043694:11087..11548Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1575043694:9475..9707TCONS_00073805-exon-scaffold_98-1575043694:9475..9707Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1575043694:8005..9112TCONS_00073805-exon-scaffold_98-1575043694:8005..9112Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1510915933:16881..17368TCONS_00073805-exon-scaffold_98-1510915933:16881..17368Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1510915933:12809..13295TCONS_00073805-exon-scaffold_98-1510915933:12809..13295Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1510915933:11087..11548TCONS_00073805-exon-scaffold_98-1510915933:11087..11548Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1510915933:9475..9707TCONS_00073805-exon-scaffold_98-1510915933:9475..9707Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1510915933:8005..9112TCONS_00073805-exon-scaffold_98-1510915933:8005..9112Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1491911889:16881..17368TCONS_00073805-exon-scaffold_98-1491911889:16881..17368Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1491911889:12809..13295TCONS_00073805-exon-scaffold_98-1491911889:12809..13295Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1491911889:11087..11548TCONS_00073805-exon-scaffold_98-1491911889:11087..11548Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1491911889:9475..9707TCONS_00073805-exon-scaffold_98-1491911889:9475..9707Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1491911889:8005..9112TCONS_00073805-exon-scaffold_98-1491911889:8005..9112Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_98supercontigscaffold_98:8005..17368 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.99246	7.91986	9.25163	11.7593	0.929476	1.89215	0	0	3.57018	2.59391	2.31563	1.79059	3.71379	3.76894	6.80138	5.83278	3.27585	5.06418	0.742677	0.397906	4.14464	3.83027	35.4971	31.99	1.2822	1.19518	12.7938	12.1966	84.8344	32.7581
Blast
[Close]
BLAST of TCONS_00073805 vs. Swiss-Prot (Human)
Match: CMTD1 (Catechol O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.768e-18
Identity = 60/173 (34.68%), Postives = 96/173 (55.49%), Query Frame = 3 
Query: 1935 MVGSLESQFLKMQCQIKGARNVLDVGTFTGMSALAMAEGIPDDGQVVTLECDEKIADVAQQAFSASKVGHKIRLELGNALQSMKKLAANGQ--KFDVIFLDADKENYILYYDLAMDEGVLAEGGIILADNVLCS---LLYDKKDFRSQKLHEFNQHVKNDDRVEQVVLTVREG 2438
            M+   ++Q L    ++  A+  LD+GTFTG SALA+A  +P DG+VVT E D +  ++ +  +  ++  HKI L L  AL+++ +L A G+   FDV  +DADKEN   YY+  +   +L  GGI+    VL     L   K D  ++ +   N+ ++ D RV   +L + +G
Sbjct:   85 MMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQ--LLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDG 255
The following BLAST results are available for this feature:
BLAST of TCONS_00073805 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CMTD15.768e-1834.68Catechol O-methyltransferase domain-containing pro... [more]
back to top