TCONS_00073805 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073805
Unique NameTCONS_00073805
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2778

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073805 ID=TCONS_00073805|Name=TCONS_00073805|organism=Clytia hemisphaerica|type=transcript|length=2778bp
TCACAGACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATGTT
TCACAGCTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTACGA
TTTGGACATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCTCC
CTCTGAGTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACAAA
GCCTTCAATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGCTC
CGATGAAAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGCAA
CTAAAATGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCGAG
ACCATTGACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGCAA
TGGATTGACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGATGA
GCACTTCAATAACAACATCTATCAAAATCACTAATAAGGTGCTTCATCCT
TCAAACAAGACATTGATCAACACTTACCTACACTTTGGGCGTTGCGTCGC
CATCATTGACGATAAAGTCATCCTGCACTATGGTGAAGAATTGCAAAAAT
ATTTCGATCATTTCGGTGTTGAGTTGGTGAATTTGATCCATGGTGGTAAC
GAGGTCGACAAAGATATCAAGAGCGTGGAGAAGATTTTAGTGCAGCTGAA
ACAAAATGGTGTGTCGAGAAACGAACCTATCCTTATTGTTGGCGGGGGCG
TTATCTCAGATATTGGTGGTTTTGCAACCGCCCTTTATCATCGAAATACG
CCCTACGTCATGTTGTGTACATCCATTGTATCTGGTATTGACGCCGGACC
TTCACCCCGAACATGTTGTGATGGATTCGGGTTTAAGAATCTGTACGGTG
CATATCACCCGCCCATCTTGACGCTGACCGATCGTTCTTTCTTCAAAACA
CTTCATGAAGGCTGGATTCGACATGgAATCGCTGAGATTATCAAGATGGC
TGTTGTAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTC
GATTGATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTC
GAAACGTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCG
TTCGGAATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTT
ACGGCCATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCAC
GGACACGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTT
GGAAAACTTCATCACGGCAGAAGAATGCAGCCGTATTTTACGTTTGATCA
GTACAATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTG
GTTGCTGCCGCAAACACCAAGGTCATCGAGAAAAGAGGTGGCAATCTTTG
TGCACCAGTACCCAAAGAACTTGGTCAATGTGGTTACATCAACGAGTTGT
CACGTGATACCATTAACCAGACATTGGATGATTACAAAATGCTGTGTCAG
CAATTTCCACGATCAGGACGAGGAGTTGATGTACACTGTCGCGATGTAGG
GCTGGAAGATCCTTCTACTGTGGCAGGTTATGGAGTAAATGATGTTTTGC
AATCTAATGGTGCACCAAAGCATCCAAACGGAAGTGCAGAATCCAACCCT
CCGTCATCTTACTCCGAATGGATCAAAACGGTTCAAACAGAGCGGAACAG
TGAATGGCAAATGAACGTCACTTTCCAAAAAGCCCTGGATACTGAATCCC
CTCCTGATTTCAATCACTTCAAATTGTTTCATGATGGCGTCGAAACATAC
GCCATGGCTCAAACGACCATCCCTTCAAAAGGTGTCCAAAATATCGCCAA
TTTGACGCAAAACAACGAAATGTTTTCTCCCTGCATGGTTGGTTCGCTTG
AGAGTCAATTCCTAAAAATGCAATGCCAAATCAAAGGAGCTCGCAACGTG
CTGGATGTCGGTACGTTTACTGGAATGTCTGCTTTGGCGATGGCTGAAGG
AATCCCCGATGATGGTCAAGTTGTCACTTTAGAATGTGATGAAAAAATTG
CTGACGTTGCACAACAAGCTTTTTCAGCGTCGAAAGTCGGTCACAAGATC
CGTCTCGAGTTAGGAAACGCCCTTCAAAGTATGAAGAAATTGGCAGCAAA
CGGCCAGAAATTCGACGTCATTTTTCTTGACGCCGATAAAGAGAATTACA
TCCTTTACTACGATCTAGCCATGGATGAAGGAGTGTTAGCCGAAGGTGGA
ATTATCTTAGCTGATAATGTGTTGTGTTCTCTTTTGTACGACAAGAAAGA
TTTTCGAAGTCAGAAGCTTCACGAGTTCAACCAACATGTGAAGAATGACG
ATCGGGTGGAGCAAGTTGTTTTGACCGTACGGGAAGGGATCTCTATCATC
AGAAGGCGTTAAATAAACCGCTCATTCATACAGACACATTCAGAgaagaa
attttagatttcaattACATATTCCAAACAACATTATTATTTTCAcgtta
ttttttgtaaataattttttttgaaggttTCACCAAATTCTTGCATCAGC
ATTTTTATGTCACTTCTTTTATCAAAGAACAGAAAAATTTTNTTCTTTTC
TTGCATCAGCATTTTTATGTCACTTCTTTTATCAAAGaacagaaaaattt
tgaattctaaATTTTGTAAATGATTTTCCTTTATATCTGAAGTAATCATT
GTCAAGCAGTTAATAGGTTGTATTCTGT
Run BLAST on NCBI

transcript from alignment at scaffold_98:8005..17368-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073805 ID=TCONS_00073805|Name=TCONS_00073805|organism=Clytia hemisphaerica|type=transcript|length=9364bp|location=Sequence derived from alignment at scaffold_98:8005..17368- (Clytia hemisphaerica)
TCACAGACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATGTT TCACAGCTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTACGA TTTGGACATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCTCC CTCTGAGTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACAAA GCCTTCAATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGCTC CGATGAAAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGCAA CTAAAATGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCGAG ACCATTGACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGCAA TGGATTGACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGATGA GCACTTCAATAACAACATCTATCAAAATCACTAATAAGGTATGCGAAGAT CCTGTTTTGTCTTCTGCTCCAAGATATTCCTTTTTATATGTTTATTCCAT TTTATAGTATACTTCTATTCTTGATCAAGGCCAAATGATTTGTAAGTTAC CAAGTAAAACGATCCAAATTGCAAATACTTCTTCAAGTAGGTCTGATATC TAAAGACAAAACACTTTTAACGGTTTAATAAGTGGTAGAGTCTAACGGCT GTGAACCCGTTTGTGAAATTTCTTGTACTGTACTTATTTCTTAGAAATGG GGTATGTCTTGGACTATAGCATAGTCTAGTGCGTAAGGTGACCTTTTGTC TCTTAACTCGCCAGTTAAATGAGTTTGGGAGTTTGTTTGCTCCGTCTCTG GATTCTTCGGGAAGTGTCTTCTGTCTCCCGATCCCTAGCCTGGTTAACCA AGCCGGTTTTTACAAGGCCAAGAAAGATACGGCTGAAGACCATATAGCAT TATCGGTGCTTTAATGATTTTTATGATGTACGGAATTTTAATTTTGCCTT GAAAAAACTGGCTTACGCGAAGCGCGCGTTCATATTTTGAACGCAGAAGT CGGTGAGACTCGGCGAGCATTTGGCCTCTTCTAATTGGTCATAATACACC ATGTGATAAGAAACGAAATTTTTCGTTTGTTTTGAAAACGCTTTTCACTT CTCAACGAAAAACTTTTTAAACATATTTTATTCTGTACTTTTTGCATAAA AAGAAAGATATGTTTTTCTCTCTCCCTCTTTTAATTTGCAAAACCTTTAT ATAACTGAATGAAAGAGAAGTTCATTAAATAGGGAGGAGGGTGTGTTTAT TTAACAAATTCCTTATTTTTATANNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNTTTTTTTGCTTGGAAAAGCTTGAAGCACTCAATCTAGCCCTTCGG GATTTACAGAAATCTGTACCGTTACCGTAGCTGCGGCAGACCATGAAGGT CAAGGTGTCTTAACAATGTGTTGACTGACTAATGTCGTTCTTTGGGAAGT TGTAATATCGCCGCATTTTTCTTTAACAGAGATTGCACGGGTCAAAGTTA CGAAATATGAGCAATGAGGCATTTTACTCCAAAACAGATTTTGACACATC ATGTCAAAAGCTAGTAATTTGACCTGATAATCGAATCAAAAATGAGAAAT CAAGTATTTGAAAACTCCCAAAATGGGAAATTAAACAAAGAGTGCCTCTG CTGTATTTGAAAGATGACGTAAGATGAGAAAGAAAAGTACTATCCTACAC AACAGGGAATATATAATAGTTCCTGTGTTGTTATAAAGAAACTCGTGTTA GGTCAAATAGGACGACACTGCATTTACTAGTCGAAGATTCAGGCCCGAGA ATATCCAGGAATTAAGTTTTTTTGAACTGCCAATTTATTTTGTCACCCAG GTAATAAAGGGTTTTAAGCATCACAGGGGCAGATTTGAATTGTCTTTAAT AAAAATTGCAGTTAAAGCCTTCGTAATTTCACAAGCACCATGCTTGTGTA ATCAAAGTAATTGCCATTGAAGTTAAGCCTAATTTTGGCCCAAACGCTGG GAAACCAGGTTAGAAGCTGGTAACATCGTGTATAAGCGGTTTGCATTTGA ATTACCAATTGTTCATCTCTCAGGTGCTTCATCCTTCAAACAAGACATTG ATCAACACTTACCTACACTTTGGGCGTTGCGTCGCCATCATTGACGATAA AGTCATCCTGCACTATGGTGAAGAATTGCAAAAATATTTCGATCATTTCG GTGTTGAGTTGGTGAATTTGATCCATGGTGGTAACGAGGTCGACAAAGAT ATCAAGAGCGTGGAGAAGATTTTAGTGCAGCTGAAACAAAATGGTGTGTC GAGAAACGAACCTATCCTTATTGTTGGCGGGGGCGTTATCTCAGATATTG GTGGTTTTGCAACCGCCCTTTATCATCGAAATACGCCCTACGTCATGTTG TGTACATCCATTGTATCTGGTATTGACGCCGGACCTTCACCCCGAACATG TTGTGATGGATTCGGGTTTAAGAATCTGTACGGTGCATATCACCCGCCCA TCTTGACGCTGACCGATCGTTCTTTCTTCAAAACACTTCATGAAGGCTGG ATTCGACATGGTGAGTCATTGAAATACTTTTCATTATTCCTTATAGTTTT CTTCTATATGCCGCATCTGTATTCGATATATTAACGAACTTTCCTACTTT CAGCTACATAAAAACAACGAAAAGAGCATGATTTATTTTGAAATTAACTT ATTGTTTAAAACAGCATTGACAAATTTAATATGCACTCCCTAAAGACCGT CATCAATCTTGAAAGTGCAGTCAGTCGTCACAAATAATGATTATTTCCAA TGACGTTGAAGTGTCTTGGCAAAAATAGGCTGCTACCCCTCTTTCGGTCC CTCTTAGAGAATGAAGTCCTCTGAAAATTGGACCTGTAAGACTCTTTTGT ATTTTGAAATGAGCGTATTTTGAGAAAAAGTCAGAAAGGAGGAAAAAATC CCTAACTATTTTCCATTTTTTCAGGAATCGCTGAGATTATCAAGATGGCT GTTGTAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTCG ATTGATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTCG AAACGTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCGT TCGGAATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTTA CGGCCATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCACG GACACGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTTG GAAAACTTCATCACGGCAGAGGAATGCAGCCGTATTTTACGTTTGATCAG TACAATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTGG TTGCTGCCGCAAACACCAAGGTCATNTCATTATTCCTTATAGTTTTCTTC TATATGCCGCATCTGTATTCGATATATTAACGAACTTTCCTACTTTCAGC TACATAAAAACAATGAAAAGAGCATGATTTATTTTGAAATTAACTTATTG TTTAAAACAGCATTGACAAATTTAATATGCACTCCCTAAAGACCGTCATC AATCTTGAAAGTGCAGTCAGTCGTCACAAATAATGATTATTTCCAATGAC GTTGAAGTGTCTTGGCAAAAATAGGCTGCTACCCCTCTTTCGGTCCCTCT TAGAGAATGAAGTCCTCTGAAAATTGGACCTGTAAGACTCTTTTGTATTT TGAAATGAGCGTATTTTGAGAAAAAGTCAGAAAGGAGGAAAAAATCCCTA ACTATTTTCCATTTTTTCAGGAATCGCTGAGATTATCAAGATGGCTGTTG TAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTCGATTG ATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTCGAAAC GTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCGTTCGG AATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTTACGGC CATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCACGGACA CGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTTGGAAA ACTTCATCACGGCAGAAGAATGCAGCCGTATTTTACGTTTGATCAGTACA ATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTGGTTGC TGCCGCAAACACCAAGGTCATCGAGAAAAGAGGTAGGCTTTATGTTAGAA AGAAAGTGTATTGTGTCTTTAAACATGGTGTGCGAGCGTTGCACATTTGC AAAACAGACTATAAAACCACAGATATCTAAGCCCGAAGGGCTAGATAGGC AACTTTAAGCTTTCTCCAGCAAAAAAAAGTGAAGCAAAAATTTGACTTTT TAAATTTCGTGCCGATGGATAGGATCTAGCATTTTAATTGTTTTCGGAGC GCGAGATCAAAAACGTAGGCGAAAAACGCTATTTCACATCTCTCAAACCG GTGAAATTGCATATTTTAGTCACGTGACTCTGGTAGGAAATCCTTCCAAA GATGAGCTTCACTTTTTGATAAAAGCCGCAAATCTAGCCCTTCGGGCTTT ACAGATATCTGTGTATAAAACAACATAAGGTTTCGATGGCCAACATATTT AGAACAAGTGAAGGACAATTTAAGCTTTAATGGACTCTAAAACACCCAAT TTTTTAGAAAATCTAACAAAAATAATCACAAAATGGATGAAATTAAGAAC AATTTTTGCCTTACAGCATAAAAGGCTAAGAACATCCAAAAACAAACACT CAGTTTAAGCCTGTGGTGGCTGTTTGCGACAGCTAAAGTGAGATTAATAT TGCAAACCACAATATAATGATAGTTATTTTGTTATCAAAGGTAATAAACA GAGAAACAAACGCTAAGAGGGATAAAATTTCGAGCAATTGTTGTTGCTGA GAAAATTGATTATATATTTCGCTCGCTCGATTGTTTTTCTAGAGCTCAAA ACTAGAGTAACATTTTGATAGATTTTATTTATTTCGAAAGTTATGCAACT GTATTTTTTATCTCTCTCGTGGGTCTTGTCAATGCAATTATGTGATTACT TCAAAAAGCATTTTACTAAGGAATGAGCTTCGTGAAAATTCTGATCGAGG TGAGAGAGAGAATGTAGCATGTTTGAGACAAGGCATTCGTTGAGAGAATA TTTATCGAAATTTTTTTCTGTTTAATTCTAAAGATTCTTTTGCAACTTTC TCCTGCTACAAAACAAATCTGGCTCTAAATATTTTCTGTTATACTGGTGG CGAAGTCTAGATTACCATACATACCCCCTTCTCACAACGTTTTGAAGTGA CACAATCATAAACTGATTATCTAAAAAATTGTTTCATCTCTAAAACATTC TTTGAGAACGTTTATCCATCCTACGATACAGAAGTGGTTCGAAATTTATG ACAATCGTCATCCTACTTTCCCAATTTCGAACAAAATATTTTTTTCACCA CCCCTGTATCAATCACTTAAACTTGTTTTGGGTTACAAAGGTGTAACTCG TTAATTTACAGTCAAAAATATTGAATCCTTCTAATGATATTGTATCTTTC TCATCTCACAGGTGGCAATCTTTGTGCACCAGTACCCAAAGAACTTGGTC AATGTGGTTACATCAACGAGTTGTCACGTGATACCATTAACCAGACATTG GATGATTACAAAATGCTGTGTCAGCAATTTCCACGATCAGGACGAGGAGT TGATGTACACTGTCGCGATGTAGGGCTGGAAGATCCTTCTACTGTGGCAG GTTATGGAGTAAATGATGTTTTGCAATCTAATGGTGCACCAAAGGTATGT TTCTTTCTTTGATTTCAATGCTTTTAGAAACTGAAAAACTTCCAATTAAA CGCAACACTAATTTAATTCAATCGGTTCTTCATGATCGCGATTCTTAAGT TTTGTTTACTTCTCAGTTCTATTTTCTATTAAATCCATGGTCAAACACTA GTCTATGAACCACTGAAATTGTGTCAAGATCGGAATAAAAAAGTATAGCA AAATATAGAAATTTGGGCTATTTTGCAGTCCTCCTTTGGTGTTTACTGCT TCTTCCAAAGAATGATGATGATGGTCATTTTATGAAAAAATAGTTAAATT TTGTCGATTTAGCCTTTAAATATTCTGCATAAAAAGTATTTTTCTTGTTC TTATAGCATCCAAACGGAAGTGCAGAATCCAACCCTCCGTCATCTTACTC CGAATGGATCAAAACGGTTCAAACAGAGCGGAACAGTGAATGGCAAATGA ACGTCACTTTCCAAAAAGCCCTGGATACTGAATCCCCTCCTGATTTCAAT CACTTCAAATTGTTTCATGATGGCGTCGAAACATACGCCATGGCTCAAAC GACCATCCCTTCAAAAGGTGTCCAAAATATCGCCAATTTGACGCAAAACA ACGAAATGTTTTCTCCCTGCATGGTTGGTTCGCTTGAGAGTCAATTCCTA AAAATGCAATGCCAAATCAAAGGAGCTCGCAACGTGCTGGATGTCGGTAC GTTTACTGGAATGTCTGCTTTGGCGATGGCTGAAGGAATCCCCGATGATG GTCAAGTTGTCACTTTAGAATGTGATGAAAAAATTGCTGACGTTGCACAA CAAGCTTTTTCAGCGTCGAAAGTCGGTCACAAGATCCGTCTCGAGTTAGG AAACGCCCTTCAAAGTATGAAGAAATTGGCAGCAAACGGCCAGAAATTCG ACGTCATTTTTCTTGACGCCGATAAAGAGAATTACATCCTTTACTACGAT CTAGCCATGGATGAAGGAGTGTTAGCCGAAGGTGGAATTATCTTAGCTGA TAATGTGTTGTGTTCTCTTTTGTACGACAAGAAAGATTTTCGAAGTCAGA AGCTTCACGAGTTCAACCAACATGTGAAGAATGACGATCGGGTGGAGCAA GTTGTTTTGACCGTACGGGAAGGGATCTCTATCATCAGAAGGCGTTAAAT AAACCGCTCATTCATACAGACACATTCAGAGAAGAAATTTTAGATTTCAA TTACATATTCCAAACAACATTATTATTTTCACGTTATTTTTTGTAAATAA TTTTTTTTGAAGGTTTCACCAAATTCTTGCATCAGCATTTTTATGTCACT TCTTTTATCAAAGAACAGAAAAATTTTNTTCTTTTCTTGCATCAGCATTT TTATGTCACTTCTTTTATCAAAGAACAGAAAAATTTTGAATTCTAAATTT TGTAAATGATTTTCCTTTATATCTGAAGTAATCATTGTCAAGCAGTTAAT AGGTTGTATTCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045842XLOC_045842Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073805-exon-scaffold_98-1575043694:16881..17368TCONS_00073805-exon-scaffold_98-1575043694:16881..17368Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1575043694:12809..13295TCONS_00073805-exon-scaffold_98-1575043694:12809..13295Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1575043694:11087..11548TCONS_00073805-exon-scaffold_98-1575043694:11087..11548Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1575043694:9475..9707TCONS_00073805-exon-scaffold_98-1575043694:9475..9707Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1575043694:8005..9112TCONS_00073805-exon-scaffold_98-1575043694:8005..9112Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1510915933:16881..17368TCONS_00073805-exon-scaffold_98-1510915933:16881..17368Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1510915933:12809..13295TCONS_00073805-exon-scaffold_98-1510915933:12809..13295Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1510915933:11087..11548TCONS_00073805-exon-scaffold_98-1510915933:11087..11548Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1510915933:9475..9707TCONS_00073805-exon-scaffold_98-1510915933:9475..9707Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1510915933:8005..9112TCONS_00073805-exon-scaffold_98-1510915933:8005..9112Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1491911889:16881..17368TCONS_00073805-exon-scaffold_98-1491911889:16881..17368Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1491911889:12809..13295TCONS_00073805-exon-scaffold_98-1491911889:12809..13295Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1491911889:11087..11548TCONS_00073805-exon-scaffold_98-1491911889:11087..11548Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1491911889:9475..9707TCONS_00073805-exon-scaffold_98-1491911889:9475..9707Clytia hemisphaericaexon
TCONS_00073805-exon-scaffold_98-1491911889:8005..9112TCONS_00073805-exon-scaffold_98-1491911889:8005..9112Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_98supercontigscaffold_98:8005..17368 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.99246 7.91986 9.25163 11.7593 0.929476 1.89215 0 0 3.57018 2.59391 2.31563 1.79059 3.71379 3.76894 6.80138 5.83278 3.27585 5.06418 0.742677 0.397906 4.14464 3.83027 35.4971 31.99 1.2822 1.19518 12.7938 12.1966 84.8344 32.7581
Blast
BLAST of TCONS_00073805 vs. Swiss-Prot (Human)
Match: CMTD1 (Catechol O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.768e-18
Identity = 60/173 (34.68%), Postives = 96/173 (55.49%), Query Frame = 3
Query: 1935 MVGSLESQFLKMQCQIKGARNVLDVGTFTGMSALAMAEGIPDDGQVVTLECDEKIADVAQQAFSASKVGHKIRLELGNALQSMKKLAANGQ--KFDVIFLDADKENYILYYDLAMDEGVLAEGGIILADNVLCS---LLYDKKDFRSQKLHEFNQHVKNDDRVEQVVLTVREG 2438
            M+   ++Q L    ++  A+  LD+GTFTG SALA+A  +P DG+VVT E D +  ++ +  +  ++  HKI L L  AL+++ +L A G+   FDV  +DADKEN   YY+  +   +L  GGI+    VL     L   K D  ++ +   N+ ++ D RV   +L + +G
Sbjct:   85 MMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQ--LLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDG 255          
The following BLAST results are available for this feature:
BLAST of TCONS_00073805 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CMTD15.768e-1834.68Catechol O-methyltransferase domain-containing pro... [more]
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