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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073771 ID=TCONS_00073771|Name=TCONS_00073771|organism=Clytia hemisphaerica|type=transcript|length=712bp
CACCAGCTAAGGATCCTAGCACGATTCCAACAATAGCTCCTGCAGAAAGC
TTTGATCGTTTCTTTTCAACGTCACGATAGTTTGGATGGTTCAATCCTCG
TGTATTGGTATTTGGCAGCCTTCTTGAAATACGTCGTCGGAAGTTAGGGA
GTCGTCTATGATTATTGATTCTTGAATTAATTCTCCGTATGTTTGTTGAG
GTGCGGCGGACATTGGCTGTGTTTAAGATCCGATTATTAATGAATTGAGG
TGAGATAGATCTCGTTTTGAGATTAGGATAAGAGGGAAGAGAGTGAACGT
ATGGTTGAAAATGAGTTCTGCGACCAACACTGGTACGGCCTGTTGAGGAG
TGCCCAGTACCTGAGCGATAAGAACGCCCACCGCTTGATCGACCTCCGCC
TCCACGTCCTCCTTTAGGGGAACGTCTGATTCTCAAATAGACTTCATCGT
CATCGTCATCAACTTGTTCGTTTTTGTTACCAAAGCTGACATCTTCGTTT
GAATTGCTGAGTTTTTGTGATTGTGAGTCTTCCTTCACAGGTGACTCAAG
TTTTCCATCTTCTTGAACAAATTTCAAGACATTTGATTTGCCAATTTGGT
CGTTTTTTCGTTGAGAAGATTCGTTTATTTGAGATGATTTTAATGCATCA
GCAGCAAGTATGATAATCACcagacaaaaatttaatttatgcaTCGACTG
TAGTTAACGTTG Run BLAST on NCBI protein sequence of TCONS_00073771-protein >TCONS_00073771-protein ID=TCONS_00073771-protein|Name=TCONS_00073771-protein|organism=Clytia hemisphaerica|type=polypeptide|length=231bp
MHKLNFCLVIIILAADALKSSQINESSQRKNDQIGKSNVLKFVQEDGKLE
SPVKEDSQSQKLSNSNEDVSFGNKNEQVDDDDDEVYLRIRRSPKGGRGGG
GRSSGGRSYRSGTGHSSTGRTSVGRRTHFQPYVHSLPSYPNLKTRSISPQ
FINNRILNTANVRRTSTNIRRINSRINNHRRLPNFRRRISRRLPNTNTRG
LNHPNYRDVEKKRSKLSAGAIVGIVLGSLAG Run BLAST on NCBI transcript from alignment at scaffold_97:735156..735867 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073771 ID=TCONS_00073771|Name=TCONS_00073771|organism=Clytia hemisphaerica|type=transcript|length=712bp|location=Sequence derived from alignment at scaffold_97:735156..735867 (Clytia hemisphaerica)
CAACGTTAACTACAGTCGAtgcataaattaaatttttgtctgGTGATTAT
CATACTTGCTGCTGATGCATTAAAATCATCTCAAATAAACGAATCTTCTC
AACGAAAAAACGACCAAATTGGCAAATCAAATGTCTTGAAATTTGTTCAA
GAAGATGGAAAACTTGAGTCACCTGTGAAGGAAGACTCACAATCACAAAA
ACTCAGCAATTCAAACGAAGATGTCAGCTTTGGTAACAAAAACGAACAAG
TTGATGACGATGACGATGAAGTCTATTTGAGAATCAGACGTTCCCCTAAA
GGAGGACGTGGAGGCGGAGGTCGATCAAGCGGTGGGCGTTCTTATCGCTC
AGGTACTGGGCACTCCTCAACAGGCCGTACCAGTGTTGGTCGCAGAACTC
ATTTTCAACCATACGTTCACTCTCTTCCCTCTTATCCTAATCTCAAAACG
AGATCTATCTCACCTCAATTCATTAATAATCGGATCTTAAACACAGCCAA
TGTCCGCCGCACCTCAACAAACATACGGAGAATTAATTCAAGAATCAATA
ATCATAGACGACTCCCTAACTTCCGACGACGTATTTCAAGAAGGCTGCCA
AATACCAATACACGAGGATTGAACCATCCAAACTATCGTGACGTTGAAAA
GAAACGATCAAAGCTTTCTGCAGGAGCTATTGTTGGAATCGTGCTAGGAT
CCTTAGCTGGTG Coding sequence (CDS) from alignment at scaffold_97:735156..735867 >TCONS_00073771 ID=TCONS_00073771|Name=TCONS_00073771|organism=Clytia hemisphaerica|type=CDS|length=693bp|location=Sequence derived from alignment at scaffold_97:735156..735867 (Clytia hemisphaerica)
AtgcataaattaaatttttgtctgGTGATTATCATACTTGCTGCTGATGC
ATTAAAATCATCTCAAATAAACGAATCTTCTCAACGAAAAAACGACCAAA
TTGGCAAATCAAATGTCTTGAAATTTGTTCAAGAAGATGGAAAACTTGAG
TCACCTGTGAAGGAAGACTCACAATCACAAAAACTCAGCAATTCAAACGA
AGATGTCAGCTTTGGTAACAAAAACGAACAAGTTGATGACGATGACGATG
AAGTCTATTTGAGAATCAGACGTTCCCCTAAAGGAGGACGTGGAGGCGGA
GGTCGATCAAGCGGTGGGCGTTCTTATCGCTCAGGTACTGGGCACTCCTC
AACAGGCCGTACCAGTGTTGGTCGCAGAACTCATTTTCAACCATACGTTC
ACTCTCTTCCCTCTTATCCTAATCTCAAAACGAGATCTATCTCACCTCAA
TTCATTAATAATCGGATCTTAAACACAGCCAATGTCCGCCGCACCTCAAC
AAACATACGGAGAATTAATTCAAGAATCAATAATCATAGACGACTCCCTA
ACTTCCGACGACGTATTTCAAGAAGGCTGCCAAATACCAATACACGAGGA
TTGAACCATCCAAACTATCGTGACGTTGAAAAGAAACGATCAAAGCTTTC
TGCAGGAGCTATTGTTGGAATCGTGCTAGGATCCTTAGCTGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073771-exon-scaffold_97-1491911889:735156..735867 | TCONS_00073771-exon-scaffold_97-1491911889:735156..735867 | Clytia hemisphaerica | exon |
| TCONS_00073771-exon-scaffold_97-1510915933:735156..735867 | TCONS_00073771-exon-scaffold_97-1510915933:735156..735867 | Clytia hemisphaerica | exon |
| TCONS_00073771-exon-scaffold_97-1575043694:735156..735867 | TCONS_00073771-exon-scaffold_97-1575043694:735156..735867 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_97 | supercontig | scaffold_97:735156..735867 . |
Blast
The following BLAST results are available for this feature:
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