TCONS_00073759 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073759
Unique NameTCONS_00073759
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length342

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073759 ID=TCONS_00073759|Name=TCONS_00073759|organism=Clytia hemisphaerica|type=transcript|length=342bp
gcgttttggatgggaaataagtggcttcaatttctcttgcctgagaaggg
ttaaagtttcacctctagcccttcgggctttaaactcaatggttaagGTC
TGTTTGGACTGGAGTTCTTCATAATCATTTATTGATATAGTAATACACAC
AGGTGTTAGATAATAATACAATAGTAGTTGTTGGATTATAGCAGTTTCTA
TAAACCATGACTTTTGTTTTCgactatttttttattattatcaaCTATGT
CTGAATAAATCATTAACTACAGTATGTCTGAATAAGTCATTTTACGAAGC
CTGAATAAGTCATTTGCGATGTCTGAATAAGTCATTTACGAT
Run BLAST on NCBI

transcript from alignment at scaffold_97:318672..319013

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073759 ID=TCONS_00073759|Name=TCONS_00073759|organism=Clytia hemisphaerica|type=transcript|length=342bp|location=Sequence derived from alignment at scaffold_97:318672..319013 (Clytia hemisphaerica)
ATCGTAAATGACTTATTCAGACATCGCAAATGACTTATTCAGGCTTCGTA
AAATGACTTATTCAGACATACTGTAGTTAATGATTTATTCAGACATAGtt
gataataataaaaaaatagtcGAAAACAAAAGTCATGGTTTATAGAAACT
GCTATAATCCAACAACTACTATTGTATTATTATCTAACACCTGTGTGTAT
TACTATATCAATAAATGATTATGAAGAACTCCAGTCCAAACAGACcttaa
ccattgagtttaaagcccgaagggctagaggtgaaactttaacccttctc
aggcaagagaaattgaagccacttatttcccatccaaaacgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045805XLOC_045805Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073759-exon-scaffold_97-1491911889:318672..319013TCONS_00073759-exon-scaffold_97-1491911889:318672..319013Clytia hemisphaericaexon
TCONS_00073759-exon-scaffold_97-1510915933:318672..319013TCONS_00073759-exon-scaffold_97-1510915933:318672..319013Clytia hemisphaericaexon
TCONS_00073759-exon-scaffold_97-1575043694:318672..319013TCONS_00073759-exon-scaffold_97-1575043694:318672..319013Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:318672..319013 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.84578	0.863449	0	1.34933	0	0.2912	0	0.722075	0.230852	0.0752045	0	0	1.16205	0	0.404852	0.444874	0	0.813519	4.58318	3.87946	1.654	0.730053	2.96148	1.79987	0.402005	0.333083	8.13996	4.06337	5.27754	6.21899
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073759 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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