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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073744 ID=TCONS_00073744|Name=TCONS_00073744|organism=Clytia hemisphaerica|type=transcript|length=1333bp
CTGCATTTCTTTTGATAatgaagctttatatttgaaatTCATAGCTTATA
GTTATAATAATTCATAATTTTATCATACCAAAAATGATGACAGAATTTTT
ATTCCCATAATAAAAATGGTCATCTACATTTCCTTTATACCACTTGTCAT
AATTTGTACAAGTTCCGAGTTTCGAAATCTCCAATTTTTTAGATTGATCG
GTTGGATGAAGTAACCAtactttcccttttttccaaagATCACCATGAAA
TTCATCAACAACAATGGCAGATCTTGCCCATCCACATTTCATCCTCTCTG
ATGCAAACATTGTTTGGCAATATCGTTTGTCCATCTCTTTCCgacaaaag
aaatattttgcattgtcATAGTACAATTTTACATTTGTCATAAACGACGA
AATGTGTTCATACCATTGCTTATAAGATGGGGATGGGTTCAATTTCTTGA
CTACCAACCCTTCCATAAACTTTCCTGCACCCCAAACGAGGCTCTCCATT
TCTGACAATTTATCAATAGAAGTTCTCATCTTTTTCACTTCCGTTTCCAG
CTCCCAAAGCGATTTTTGTGATTGTTCTTCCAACTCAGTCAATCTCTTCA
CAATGTCACCATCTGTCTCCTGCATCTTTTCTTCGACTTCTATCATCTTT
CTTTGAATAACAACTAGGTCATCCTTCTCTAGTTTCGCttccattttttg
aattatGTCTGTATTCATTGCAGCaagtttgttttcaaaaccaTCAATCT
TGGTTTTCAATTGAATGATTTTGTTATCTTTTTCAACGGAGCGGTTGTTG
ATTTCAACAACTTTTGCATCAATCATGGCAAGTTTGGCATCGTTTAAGAT
AATCTTGTTGTCACATTCTTGAAATCTTGCAACCTCATTTTGAAGTCGTT
GGACTTCTCTCTCCAAAgtcattaattttgattttccttcaTTTTCGTCG
CCATTAACAGTAATTTTCGATTTAACCTCGAATTCTTTCTGCTCCATTTT
GAGCTTCTCTATTTCCCGTTGGTGCTTCATTGTTTGAATAATATTGTCTT
TTTCACTCAAAGTTTTCTCAAACTCCAACACTTTAATTTGATACTCATAA
TTCAAGACTTGTATTTTGCGTTCATAatcttctttcatttttgacatttc
agctttcaatttttgaatttcgtcgACATTTTGATTTGGTTTCAAACGTA
AAGGATCGGTAGCGCAATGAGCAGAATCCATTTTTGATGTCTTTTTCTCT
ATTACACTCAAGAAAATATTATCATCTTAAAAGTTGTCATGCTTTTTCTT
GCAATAAAGTACTGTCTgtgttgtttgtttttt Run BLAST on NCBI protein sequence of TCONS_00073744-protein >TCONS_00073744-protein ID=TCONS_00073744-protein|Name=TCONS_00073744-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
MDSAHCATDPLRLKPNQNVDEIQKLKAEMSKMKEDYERKIQVLNYEYQIK
VLEFEKTLSEKDNIIQTMKHQREIEKLKMEQKEFEVKSKITVNGDENEGK
SKLMTLEREVQRLQNEVARFQECDNKIILNDAKLAMIDAKVVEINNRSVE
KDNKIIQLKTKIDGFENKLAAMNTDIIQKMEAKLEKDDLVVIQRKMIEVE
EKMQETDGDIVKRLTELEEQSQKSLWELETEVKKMRTSIDKLSEMESLVW
GAGKFMEGLVVKKLNPSPSYKQWYEHISSFMTNVKLYYDNAKYFFCRKEM
DKRYCQTMFASERMKCGWARSAIVVDEFHGDLWKKGKVWLLHPTDQSKKL
EISKLGTCTNYDKWYKGNVDDHFYYGNKNSVIIFGMIKL Run BLAST on NCBI transcript from alignment at scaffold_97:68277..69609 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073744 ID=TCONS_00073744|Name=TCONS_00073744|organism=Clytia hemisphaerica|type=transcript|length=1333bp|location=Sequence derived from alignment at scaffold_97:68277..69609 (Clytia hemisphaerica)
aaaaaacaaacaacacAGACAGTACTTTATTGCAAGAAAAAGCATGACAA
CTTTTAAGATGATAATATTTTCTTGAGTGTAATAGAGAAAAAGACATCAA
AAATGGATTCTGCTCATTGCGCTACCGATCCTTTACGTTTGAAACCAAAT
CAAAATGTcgacgaaattcaaaaattgaaagctgaaatgtcaaaaatgaa
agaagatTATGAACGCAAAATACAAGTCTTGAATTATGAGTATCAAATTA
AAGTGTTGGAGTTTGAGAAAACTTTGAGTGAAAAAGACAATATTATTCAA
ACAATGAAGCACCAACGGGAAATAGAGAAGCTCAAAATGGAGCAGAAAGA
ATTCGAGGTTAAATCGAAAATTACTGTTAATGGCGACGAAAAtgaaggaa
aatcaaaattaatgacTTTGGAGAGAGAAGTCCAACGACTTCAAAATGAG
GTTGCAAGATTTCAAGAATGTGACAACAAGATTATCTTAAACGATGCCAA
ACTTGCCATGATTGATGCAAAAGTTGTTGAAATCAACAACCGCTCCGTTG
AAAAAGATAACAAAATCATTCAATTGAAAACCAAGATTGAtggttttgaa
aacaaacttGCTGCAATGAATACAGACataattcaaaaaatggaaGCGAA
ACTAGAGAAGGATGACCTAGTTGTTATTCAAAGAAAGATGATAGAAGTCG
AAGAAAAGATGCAGGAGACAGATGGTGACATTGTGAAGAGATTGACTGAG
TTGGAAGAACAATCACAAAAATCGCTTTGGGAGCTGGAAACGGAAGTGAA
AAAGATGAGAACTTCTATTGATAAATTGTCAGAAATGGAGAGCCTCGTTT
GGGGTGCAGGAAAGTTTATGGAAGGGTTGGTAGTCAAGAAATTGAACCCA
TCCCCATCTTATAAGCAATGGTATGAACACATTTCGTCGTTTATGACAAA
TGTAAAATTGTACTATgacaatgcaaaatatttcttttgtcGGAAAGAGA
TGGACAAACGATATTGCCAAACAATGTTTGCATCAGAGAGGATGAAATGT
GGATGGGCAAGATCTGCCATTGTTGTTGATGAATTTCATGGTGATctttg
gaaaaaagggaaagtaTGGTTACTTCATCCAACCGATCAATCTAAAAAAT
TGGAGATTTCGAAACTCGGAACTTGTACAAATTATGACAAGTGGTATAAA
GGAAATGTAGATGACCATTTTTATTATGGGAATAAAAATTCTGTCATCAT
TTTTGGTATGATAAAATTATGAATTATTATAACTATAAGCTATGAatttc
aaatataaagcttcatTATCAAAAGAAATGCAG Coding sequence (CDS) from alignment at scaffold_97:68277..69609 >TCONS_00073744 ID=TCONS_00073744|Name=TCONS_00073744|organism=Clytia hemisphaerica|type=CDS|length=1170bp|location=Sequence derived from alignment at scaffold_97:68277..69609 (Clytia hemisphaerica)
ATGGATTCTGCTCATTGCGCTACCGATCCTTTACGTTTGAAACCAAATCA
AAATGTcgacgaaattcaaaaattgaaagctgaaatgtcaaaaatgaaag
aagatTATGAACGCAAAATACAAGTCTTGAATTATGAGTATCAAATTAAA
GTGTTGGAGTTTGAGAAAACTTTGAGTGAAAAAGACAATATTATTCAAAC
AATGAAGCACCAACGGGAAATAGAGAAGCTCAAAATGGAGCAGAAAGAAT
TCGAGGTTAAATCGAAAATTACTGTTAATGGCGACGAAAAtgaaggaaaa
tcaaaattaatgacTTTGGAGAGAGAAGTCCAACGACTTCAAAATGAGGT
TGCAAGATTTCAAGAATGTGACAACAAGATTATCTTAAACGATGCCAAAC
TTGCCATGATTGATGCAAAAGTTGTTGAAATCAACAACCGCTCCGTTGAA
AAAGATAACAAAATCATTCAATTGAAAACCAAGATTGAtggttttgaaaa
caaacttGCTGCAATGAATACAGACataattcaaaaaatggaaGCGAAAC
TAGAGAAGGATGACCTAGTTGTTATTCAAAGAAAGATGATAGAAGTCGAA
GAAAAGATGCAGGAGACAGATGGTGACATTGTGAAGAGATTGACTGAGTT
GGAAGAACAATCACAAAAATCGCTTTGGGAGCTGGAAACGGAAGTGAAAA
AGATGAGAACTTCTATTGATAAATTGTCAGAAATGGAGAGCCTCGTTTGG
GGTGCAGGAAAGTTTATGGAAGGGTTGGTAGTCAAGAAATTGAACCCATC
CCCATCTTATAAGCAATGGTATGAACACATTTCGTCGTTTATGACAAATG
TAAAATTGTACTATgacaatgcaaaatatttcttttgtcGGAAAGAGATG
GACAAACGATATTGCCAAACAATGTTTGCATCAGAGAGGATGAAATGTGG
ATGGGCAAGATCTGCCATTGTTGTTGATGAATTTCATGGTGATctttgga
aaaaagggaaagtaTGGTTACTTCATCCAACCGATCAATCTAAAAAATTG
GAGATTTCGAAACTCGGAACTTGTACAAATTATGACAAGTGGTATAAAGG
AAATGTAGATGACCATTTTTATTATGGGAATAAAAATTCTGTCATCATTT
TTGGTATGATAAAATTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073744-exon-scaffold_97-1491911889:68277..69609 | TCONS_00073744-exon-scaffold_97-1491911889:68277..69609 | Clytia hemisphaerica | exon |
| TCONS_00073744-exon-scaffold_97-1510915933:68277..69609 | TCONS_00073744-exon-scaffold_97-1510915933:68277..69609 | Clytia hemisphaerica | exon |
| TCONS_00073744-exon-scaffold_97-1575043694:68277..69609 | TCONS_00073744-exon-scaffold_97-1575043694:68277..69609 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_97 | supercontig | scaffold_97:68277..69609 . |
Blast
The following BLAST results are available for this feature:
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