TCONS_00073717 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073717
Unique NameTCONS_00073717
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1951

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073717 ID=TCONS_00073717|Name=TCONS_00073717|organism=Clytia hemisphaerica|type=transcript|length=1951bp
CTGCAAAATGTACACGTGGGTTCCGCTTATGACATCGGTAAAATTTGGTC
CAAGGTCCAGGAGGTCAGCCAGACTGCAGACAGAGGCAGACGCCAAATCT
ATCAAATCTATACAGACATTATCCACCACTCTCACACCCACAACTTTCTG
CAGATATGGCACCACAACAAGCACAGGCAGCACCAGAAACACCTAAAGGA
ATCAATGGAATCCTTCTTGGTCCACCAGGAGCAGGAAAAGGTACCCAGTC
TCAACggttgattgaaaaatattgcatCTGTCATTTGGCTACTGGAGATT
TATTACGAGCTGTCATTGCATCAGGATCAGATcttggaaagaaaataaag
ggtGTAATTGATGCTGGACAGCTTGTATCCGACGATCTGGTGGTTGAATT
GATTGATTCAAATCTGAAGAAACCAGAATGTAAGAATGGATTTCTTTTGG
ACGGTTTCCCAAGAACTGTACCACAAGCTGAAAAGTTGGATGATTTATTA
GAAGAGCGAGGCACACCACTTGACCGGGTCATTGAGATGAAAATTGACGA
AGAAAAACTTGTGTCAAGAATCGTTGGGAGATTATTCCACATCAAAAGCG
GTAGATCGTATCACGAAGTTTTCAATCCACCCAAAAAAACAATGACTGAT
GACATCACCGGTGAGCCATTAACAAGACGATCAGACGATAATGAAGAAGC
TCTCCGCAAACGTTTAGCATCCTTCCACAAATCTACATCACCTTTAGTCA
ACTTCTATCAAAAACGTGGAATTCATAGCGCCGTCAATGCCGACCGATCC
ATGGACGCTGTTTTCGCttctatatccgccatctttgatgaAGCACGCGA
CAAAAGATCATAATAAAGCAACGTCGCCATAACGACGATCTCATTTGTTT
GGTCTTAGGATCTGTTTTCAGCCAAACTTGTTGTTTTGATGTGTACCCCA
CAAATATTGAGTGGCCAGCGTGTAACAATTTCACTGAATTGGCGCTCTAT
CTGAAGTCCATGTCCAATCCAATGTACAGTGTGTCCCTAAAACgaggaca
aatttttatatgaagtgaaatcctcaaaactcatcATATCTGGCCTGGAA
TAATTGAATTGAAAGAATTCTCTTTCaaatcaatagatattcaattctCA
AGATAATTGAATAGGTTTTGGAgattaaaattaaataaataagtcTTAAA
ATTTCGCACAAGTTAtaaggattttactttatataaaaagttGTCCGCTT
TTTTGGGCACGCTATATACCAGAAAAAGACTGTTAACACGTTACTTGTTC
AGTTGAATTGtaaaaaaactacttttttaATTCGTTGATTGGTTGCCATT
AGTTGTCCATATTGTTCtcctttttcaaaatctttataaTTATTTCAATG
TAAGGACCAGCTTTCATAGAAACCGCCGTAAACTTTAAAGCTTTAAATCA
TTAATAGTGTACAAAATAAGATccaattttcgtgattttgctTAAGCTTA
TGCCTTTTTAAACTACATtaacatacacgctttttcttataagaacaatt
ttataagagcactagtcttaaaaattttctaagaacaattttagcctcag
atttcagaaatgatTAAGAAAGcactgattttaacagatttttaatccat
tttcagttttcaaagtaaagaaactaagcatATAAACATTGTATAAACAT
TCAAgcctgaaaatttccaaaaattaagcCCAGCTTCAGCCAAAAttcac
tggttcttataaaaactttattttgttgttttttttcctcTATCCATGGG
TTTCATTACCTTTTTTAAAGACCAACTACATTTACCATTTTCTTAGTTTA
TCAAATTTAGGGTACGATTTTTTATAGTCCGTGTTTTATATTTGTGATGA
TTAAAACGATAAAATTAGAATAGCAaataaaaaacttgaaattaaaaaat
c
Run BLAST on NCBI

protein sequence of TCONS_00073717-protein

>TCONS_00073717-protein ID=TCONS_00073717-protein|Name=TCONS_00073717-protein|organism=Clytia hemisphaerica|type=polypeptide|length=235bp
MAPQQAQAAPETPKGINGILLGPPGAGKGTQSQRLIEKYCICHLATGDLL
RAVIASGSDLGKKIKGVIDAGQLVSDDLVVELIDSNLKKPECKNGFLLDG
FPRTVPQAEKLDDLLEERGTPLDRVIEMKIDEEKLVSRIVGRLFHIKSGR
SYHEVFNPPKKTMTDDITGEPLTRRSDDNEEALRKRLASFHKSTSPLVNF
YQKRGIHSAVNADRSMDAVFASISAIFDEARDKRS
Run BLAST on NCBI

transcript from alignment at scaffold_97:385251..393597-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073717 ID=TCONS_00073717|Name=TCONS_00073717|organism=Clytia hemisphaerica|type=transcript|length=8347bp|location=Sequence derived from alignment at scaffold_97:385251..393597- (Clytia hemisphaerica)
CTGCAAAATGTACACGTGGGTTCCGCTTATGACATCGGTAAAATTTGGTC
CAAGGTCCAGGAGGTCAGCCAGACTGCAGACAGAGGCAGACGCCAAATCT
ATCAAATCTATACAGACATTATCCACCACTCTCACACCCACAACTTTCTG
CAGATATGGCACCACAACAAGCACAGGCAGCACCAGAAACACCTAAAGGA
ATCAATGGAATCCTTCTTGGTCCACCAGGAGCAGGAAAAGGTACCCAGGT
AAAAAGATTTGTTTTTCAATATTTGATTGGCTGTGTGTTTTCAACCGTCA
TTAGGATCTCGAAAATTCAAACTCTCAACCCAAATTCTATTCATTTTGTC
ATTAGTATATAGAAGAAGAAATCTCAGCTTGAATCTTCAGGCTATGATGG
CAAGCAAAGGTAAAAATTTTGAAACAAAGCTCAGAAAAGCTCAGTGTTCA
AGAGTGGTTCAAATCTAAAAACTTTGCTAACTTCTAAGAACAAAAGCCGA
CTACCACCTAACAGTCACCCTGGTGTGTATATGATAGAATGCGAATGTGG
TAAAAGATATGTTGGCGAGACCGGGTTAAAGATATCCACATGTGTCAGCC
AACACAAAAAGAACGTTGAAGATGAAAAATGGGACATTTCGGGTATAACT
AACCATGCTAAAGACTGTACCCAAGGACTTAATTGGAACGAAGCTAGGCT
TTTAAAGACTGAAGAGAACAAATTTGATAGAAAAGTGCGTTATTTATAAG
ATGCTTTGTTGTCTTTTTAATCTTTGTGTAAACTTGCATATGTTTTGCAT
ACTTTCCAACTAAATCCAACCACGGCATTTTAGTTCCTGTATTTTTGCAT
ACAATTCAAGATGGCGGATGGAAAGGCGAAAAGGTCTATTGCAATAAAGA
GTTACCTTATGACTTTGAATAGACGCCCGGCAGTTACATCAATATGTCAA
AAACATTTTGTTCAACCACCTTCACTTCAAGATAGGGTACCATAGAATGA
ACTTCCTTTTATAGGATGAACCATATTCATGTGGCTTTCAGCCTTGCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAG
CACTGTTATGAAATTTAGTCTGCATGAAAGGAAGTTCTTTATTTTCACTA
AAAAGTGGTATATATTTGCCAGACTTAATTTTTCTTTACTGTTTCCCATC
CCTTTTTACCATAAAAAATTTAGCCCGAAATCCTTGGGGGATAGGTATTT
TTAAAGGTTGGGGGGATGCCAAGAAGGGGGGGATCGTTTAAGAAGGGGGG
ATCATACCCCTTTCCGCACTATGTGTAAGCAAAATGATGAAAGGTGTAAA
AAAGGATGAGATATTCCAAAAATATTGATAAAAAACGGGTTGTCCGAAAG
AATGTTTTAAAAACTAATGGATATTATTTTGAGGATGAAAATTACATGAG
TGTATAGTAAAAAGTGTATCTTTCAGAAAATAACAAAATATTCACTGAAA
GAGTGACATAGGATGAAATATTCCACTTTTTATGTCACCCAAAACCGAAA
ATTGTGGAATTCTTCATCCTTTTCTACTCCTTGAATTTAAATTTGAAAAT
TTATGGTATCATCAATAGATTTCCAAAGAGTTTAGATGGTAAAGCCGTTT
TAAAAAATTGCTATAGTAAAAATCAGAAAATTTTGATTTTCTAGAATATT
TTATCCCAAATATCTTTGAAACCTATATCATTGGAATCCTCGTGGAAAAA
TACGTCATTTCTAAAAATAAGGTCCAAAAATTCCTAACATCAAAGTAGAT
ATTGCGAAAAAGATGATTTTAAAGATCACTGAAAAGTCCATCAGGTACAT
TCTAAAAAAACACCGACATAAACAAAATTTAACATCTTTACAAAAGTTGT
CTTTTTGATTTTTCAAACATTTGTTTTGTGCGTTCCCTACCACAATCCCG
TGAAGTCCGGTAACTTGCATCAGCGTAGGCAAACATGCATAGCCATCAAA
TGACTGACCAATCAAAGCAAAATTTCAAAACAAATGAACTACGCAGCTCC
GCTTGCAGCTCTACTCTACCATCTTTGTTTTGATTTGAGTTTGTATTTTA
ATGACCAGACAGATCATTCATTTGAGGGCTATGCATGTTTGCCTCCACTG
ATGCAAGTTACCCGACTTCACGGTAACTTATGTAATCGCACTTTCGGTAA
GTTGGGTTAGTCATAATCCAAGATAAGAAATTAGAGGAGACTAAAAGACG
GGGGAGTTAATGTACCGTGAGTTAATGTACCGTGAGTGGTCCTAAATCCA
ACAGCCCTGCCTAAATCCGACCCCCCCCCCAAATAACTGCTATAAAAAAA
ATTCTATATTTGTTCAAACATTCCCTCTCCAAGTTGAACAATAAATTATA
TTGCAAGGACTCTCGAAACAAAATATCTATAAACAAGATGACTAAAACCA
GTCAATAAATGTGATCAAAAAAGTTTGAGTTGTAAAAACAATTACCTCTT
TTATTCTGAATCTGTTGCTCGTGTTTAAAAAACGTTAACAATTTTGCAGA
ATTTTGTAATAAAAAATTATGTTTTGTATAAGAAGCAATTATTGTTATTT
GGTTCAATTGGTTCAGTGTATCAAATCTCTCAGTTTAGTTGACACTTTGG
TATCTTCATTGCGTCACAGCGAAAGGTTTGTTTCTATTTTAGTTTGAAAT
TTTTTTATCTTTGAAATACCCCATCAGATTTAGACAGGGCTGTCGGATTT
AGGACCACTCACGGTATGTAATATTAATTCATAATTTCTTTATCTTTATT
TTTCACGAATTCTCAACTTCAGTTGAGCTAGAATCTGAGAATGTCTGTGT
GTCTGTCTGTGTGTCTGTCTGTGTGTCACCAAAACTTTGGGGCAGGCTGG
AGACTTCAAAATTGGTCTGATTGGGCTGAAATTTTGCACACTTGATCCAT
GGGCAAATCCCTGGGGGTATTTTTTTCATTTTTTCAAAATTTTAATTTTT
GAGGCCTGGGGACGAGTTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCA
GGCTGGAGACTTCAAAAATGGTCCGATTTGGCTGAAATTTTGCACACTTG
ATCCTTGGGCAAATCCCTGGGGGTGTTTTTTTTTCATTTTTTCAAAATTT
TAATTTTTGGGGTCTGGGGACAAGTTTTTCGCCAAAACGAGGCTAAAACC
CAAAATACAATAATTTTTCTTAAGCCATGAAGTTTACAATTAGGTCTACG
AATGATTTCAAAGATACTGAAGTTGAGCCAGTGCGGTTAGTCATAATATT
GTGCATGCAATTCAAATATTTCAATTGGTTAGTTGTCATTCGAACTTCTA
TTAAGTGACAAAAATTAAAGGGAACTTTGAAAAAATCTGCGAACACAATA
ATTACGAAGGAGGAGTGGCTGAATTTTAGTTTATCCATGATAATTAACAA
GTAATAACATGGTCGTTTGGGTAACTTTGGGAATAATAGCCTCTTGTTTC
ATTGAAAACATTTCAAATAGCCCTCGCATACGTTTTTGGGGGCTAAGCTT
TCTAGGGGGTGGGCTGAGTTTATGATTTAAGTTTTCAATAAAAACTTTCA
GATCATTTCAAAAAAATGCCTGTTACATATATGTTAATATTATAATGCCT
GTTATATAATTCATCACTGAATTACTGAAAAAAATAAGTTGCCTTCTAAG
TGTCTTATTAAACTCAACTAAAGTGCTCTACCCAATGAGCTACATCTCTT
TGGCAAAATAGAAACTGAAATGACAGGAATAGAACCGGCTACCTCTTCAG
CTATTATTCAACACTTAGAAGATAGAAGTGTATATTAATATATCGACATT
TTGTTGTTATATGCTAAAATTTTGTTAAATTTTTGTTAGCTTGTCCTTAT
TGTGACATAATGTTGATCTTTGTTAATTTAAGAAAAACTTATTTAGATGA
CCTTCTTTATTTTGTCTAAAAACTCTCAAGCACAATTTTCTTTTTGAGTT
TTCCTTTCATGAAGGTGGGGGCGCTACATCTGGCTACATTCTTAGAATTT
AGCTGGAGGCTATTTTCGTTAGCCCCCCCCCTGAAAAATACTGGGGACTG
GACCCCTTTGCATACTATGCAGATTGTAAACAAAAAATCCTCTCAACTGC
AAAATTAAATTCTGTGAAACTTCTGAATTTTGAGCTGTAAACCGCAAAAT
TCAATTCTGTGAAAATTCCTTCCCTTAAGGTAGTATTATTCTTTGGCAGG
GAAATGATTATGAGACAAGGACAAATAATAAATATATTCTGGTCACACTT
GAAATCCTTCTTATCCATTTGACTTTAAAAATGGTGAAGTGAGGGAGAGT
CATAGTTTTGGGCAAAAAAATTTTTGCCTAACTTTGATGAGCGACAAAAA
CATTTTTCTACTTTTTACACATTTTCAACCATGAAAGGGGGAGTGTCTTT
GAATTGGATTATATAATAGTCTTTGAAATATATAATACAGAAATTATTGT
TTCTTTTTAGTCTCAACGGTTGATTGAAAAATATTGCATCTGTCATTTGG
CTACTGGAGATTTATTACGAGCTGTCATTGCATCAGGATCAGATCTTGGA
AAGAAAATAAAGGGTGTAATTGATGCTGGACAGGTATGAATTTCATTTGA
TTTGTTTCGTTATATTCTCTTGACTGGGGCATTACATTCCTGTATATTTA
TAAAGAGAATTTAGAAGTCAAACAAATTTCATTTTTATCCTTAGATGTGA
TTCAAAGTTTCAATCAAGTAGAAAAGTTCAAAAAGTTTTATTGAAATACC
AAAAAATAAATAATTCGCTTAGAACTCAACTGCTATCATCGTTTCATCAC
AGATTCTATTTCTTTCAAGACTGATATCCACAATGCAACTTGTCTGGAGA
TTGCGCCAACGTAAAACACAATGTAGCTATTGATTGTAGATTCGTTCTTT
ATTTTCTCCGTATTACTAGCTCTTTATGCTTGTAACATTATTTGTAGCTT
GTATCCGACGATCTGGTGGTTGAATTGATTGATTCAAATCTGAAGAAACC
AGAATGTAAGAATGGATTTCTTTTGGACGGTTTCCCAAGAACTGTACCAC
AAGCTGAAAAGGTAATGTGCTATTTTGTTTTATGTTGTAGTAGTCAATTA
CTGATTACTGCTTCTGTGTATTCTTCTTTAGTTTTAAACAGAGTGTCCCA
GCACTTTCTACCTTAGACAGATTGAATTTCTTTTGACCAATACCTGTAGG
AAAATGAAAGAAATTAGGTGAAAATAAGGCTAATTCGCAAATTTTATTCC
ACGCGAAAATAAATCCAAGTTTAGGGTATTATTTGGAAGAAAAATATGAT
TTCACTCCCTCAGACTAGGATATCTTTCTTTAGGGACCATTTTTTTCGGA
TAGTTTACCCATTTGTTAATATGTGTTCTCTAATGTTTTGATTTTGTGAT
TTGTGTCTTTCAGTTGGATGATTTATTAGAAGAGCGAGGCACACCACTTG
ACCGGGTCATTGAGATGAAAATTGACGAAGAAAAACTTGTGTCAAGAATC
GTTGGGAGGTAAAGTTCAGTTGTTATTCCTTTTAACAGGGTTGTTAGGTT
TTATTAAAAATCTTCATCCTTGAATCTCCTTAAAAAATTGTAAATTTGGA
AAATAATTATTATTACCTCATATCTCCTGAAATTCGATTTTCAAGGGATT
TTCATCCCACTAAAGTATCAATACCCTATTGTTTCATGTAACCCATCAAA
GGGGGTGATGTAAAATTTTATTTTCTACCAGAACCAAATCATTCCAAAAT
ATTTCTTCTTTAATTTCAGATTATTCCACATCAAAAGCGGTAGATCGTAT
CACGAAGTTTTCAATCCACCCAAAAAAACAATGACTGATGACGTGGGTTG
ATTTGTTTGTGATTGTCTCTTTCTGAGTGTGCTAAATTAAGTGCGTATCG
TGGCTTCGCGGCTTCGTGGGTTCGTGGGTCTGCGAGTCCGCGAATCCGCG
CGAGGAATTTTCAACCCACGGACCCACAAGCAATTTTGGCCCACGAATCC
GCAAACATTAATCACCCACGCACTCACGTGACTTTTTTTTTACCCATGAA
CCTGCGGACCCACAAAATTTGGGGACAAGCTGGAGTTTTTACAAGCTCTT
ATTTGATTTGGTTGGTCGTTAAGATGTAATAAAAGAATCTCATTACTTTT
TCTAAAGAACGCGTCATCTCTATCACTTTAAATGACCAATTATTGAAGTA
TCTTGTAAAAACTCCAGCTCATCCCAAAATTTGACCCTCGAACCCTCGAG
TAATTTAAACCCTCTCTCATCTATGTTGTTTGCCAATTGAATTATTTCGT
TCAGTGTCTTGTTTGATGACCTTATTGAGTGATTTCTGCAGTCGACCTCT
TTTCCTCGTCAAGTGGACAGGGTCCCAAAGAATCAATTTCGTAGCGGGTT
CATTCCCTCTGATGCTTTGACACCACCCTTTTAGTACACTACTGACGTTC
TCCGCGACCGGATATTTAATATCACCCTTTTAGTACACTGTACTGACTTT
TCTCCATGACTGAATTTTTATTACCATTCTATCTTGAATTATCTTACAGA
TCACCGGTGAGCCATTAACAAGACGATCAGACGATAATGAAGAAGCTCTC
CGCAAACGTTTAGCATCCTTCCACAAATCTACATCACCTTTAGTCAACTT
CTATCAAAAACGTGGAATTCATAGCGCCGTCAATGCCGACCGATCCATGG
ACGCTGTTTTCGCTTCTATATCCGCCATCTTTGATGAAGCACGCGACAAA
AGATCATAATAAAGCAACGTCGCCATAACGACGATCTCATTTGTTTGGTC
TTAGGATCTGTTTTCAGCCAAACTTGTTGTTTTGATGTGTACCCCACAAA
TATTGAGTGGCCAGCGTGTAACAATTTCACTGAATTGGCGCTCTATCTGA
AGTCCATGTCCAATCCAATGTACAGTGTGTCCCTAAAACGAGGACAAATT
TTTATATGAAGTGAAATCCTCAAAACTCATCATATCTGGCCTGGAATAAT
TGAATTGAAAGAATTCTCTTTCAAATCAATAGATATTCAATTCTCAAGAT
AATTGAATAGGTTTTGGAGATTAAAATTAAATAAATAAGTCTTAAAATTT
CGCACAAGTTATAAGGATTTTACTTTATATAAAAAGTTGTCCGCTTTTTT
GGGCACGCTATATACCAGAAAAAGACTGTTAACACGTTACTTGTTCAGTT
GAATTGTAAAAAAACTACTTTTTTAATTCGTTGATTGGTTGCCATTAGTT
GTCCATATTGTTCTCCTTTTTCAAAATCTTTATAATTATTTCAATGTAAG
GACCAGCTTTCATAGAAACCGCCGTAAACTTTAAAGCTTTAAATCATTAA
TAGTGTACAAAATAAGATCCAATTTTCGTGATTTTGCTTAAGCTTATGCC
TTTTTAAACTACATTAACATACACGCTTTTTCTTATAAGAACAATTTTAT
AAGAGCACTAGTCTTAAAAATTTTCTAAGAACAATTTTAGCCTCAGATTT
CAGAAATGATTAAGAAAGCACTGATTTTAACAGATTTTTAATCCATTTTC
AGTTTTCAAAGTAAAGAAACTAAGCATATAAACATTGTATAAACATTCAA
GCCTGAAAATTTCCAAAAATTAAGCCCAGCTTCAGCCAAAATTCACTGGT
TCTTATAAAAACTTTATTTTGTTGTTTTTTTTCCTCTATCCATGGGTTTC
ATTACCTTTTTTAAAGACCAACTACATTTACCATTTTCTTAGTTTATCAA
ATTTAGGGTACGATTTTTTATAGTCCGTGTTTTATATTTGTGATGATTAA
AACGATAAAATTAGAATAGCAAATAAAAAACTTGAAATTAAAAAATC

Coding sequence (CDS) from alignment at scaffold_97:385251..393597-

>TCONS_00073717 ID=TCONS_00073717|Name=TCONS_00073717|organism=Clytia hemisphaerica|type=CDS|length=4248bp|location=Sequence derived from alignment at scaffold_97:385251..393597- (Clytia hemisphaerica)
ATCACCGGTGAGCCATTAACAAGACGATCAGACGATAATGAAGAAGCTCT
CCGCAAACGTTTAGCATCCTTCCACAAATCTACATCACCTTTAGTCAACT
TCTATCAAAAACGTGGAATTCATAGCGCCGTCAATGCCGACCGATCCATG
GACGCTGTTTTCGCTTCTATATCCGCCATCTTTGATGAAGCACGCGACAA
AAGATCATAAATTATTCCACATCAAAAGCGGTAGATCGTATCACGAAGTT
TTCAATCCACCCAAAAAAACAATGACTGATGACTTGGATGATTTATTAGA
AGAGCGAGGCACACCACTTGACCGGGTCATTGAGATGAAAATTGACGAAG
AAAAACTTGTGTCAAGAATCGTTGGGAGCTTGTATCCGACGATCTGGTGG
TTGAATTGATTGATTCAAATCTGAAGAAACCAGAATGTAAGAATGGATTT
CTTTTGGACGGTTTCCCAAGAACTGTACCACAAGCTGAAAAGTCTCAACG
GTTGATTGAAAAATATTGCATCTGTCATTTGGCTACTGGAGATTTATTAC
GAGCTGTCATTGCATCAGGATCAGATCTTGGAAAGAAAATAAAGGGTGTA
ATTGATGCTGGACAGATGGCACCACAACAAGCACAGGCAGCACCAGAAAC
ACCTAAAGGAATCAATGGAATCCTTCTTGGTCCACCAGGAGCAGGAAAAG
GTACCCAGATCACCGGTGAGCCATTAACAAGACGATCAGACGATAATGAA
GAAGCTCTCCGCAAACGTTTAGCATCCTTCCACAAATCTACATCACCTTT
AGTCAACTTCTATCAAAAACGTGGAATTCATAGCGCCGTCAATGCCGACC
GATCCATGGACGCTGTTTTCGCTTCTATATCCGCCATCTTTGATGAAGCA
CGCGACAAAAGATCATAAATTATTCCACATCAAAAGCGGTAGATCGTATC
ACGAAGTTTTCAATCCACCCAAAAAAACAATGACTGATGACTTGGATGAT
TTATTAGAAGAGCGAGGCACACCACTTGACCGGGTCATTGAGATGAAAAT
TGACGAAGAAAAACTTGTGTCAAGAATCGTTGGGAGCTTGTATCCGACGA
TCTGGTGGTTGAATTGATTGATTCAAATCTGAAGAAACCAGAATGTAAGA
ATGGATTTCTTTTGGACGGTTTCCCAAGAACTGTACCACAAGCTGAAAAG
TCTCAACGGTTGATTGAAAAATATTGCATCTGTCATTTGGCTACTGGAGA
TTTATTACGAGCTGTCATTGCATCAGGATCAGATCTTGGAAAGAAAATAA
AGGGTGTAATTGATGCTGGACAGATGGCACCACAACAAGCACAGGCAGCA
CCAGAAACACCTAAAGGAATCAATGGAATCCTTCTTGGTCCACCAGGAGC
AGGAAAAGGTACCCAGATCACCGGTGAGCCATTAACAAGACGATCAGACG
ATAATGAAGAAGCTCTCCGCAAACGTTTAGCATCCTTCCACAAATCTACA
TCACCTTTAGTCAACTTCTATCAAAAACGTGGAATTCATAGCGCCGTCAA
TGCCGACCGATCCATGGACGCTGTTTTCGCTTCTATATCCGCCATCTTTG
ATGAAGCACGCGACAAAAGATCATAAATTATTCCACATCAAAAGCGGTAG
ATCGTATCACGAAGTTTTCAATCCACCCAAAAAAACAATGACTGATGACT
TGGATGATTTATTAGAAGAGCGAGGCACACCACTTGACCGGGTCATTGAG
ATGAAAATTGACGAAGAAAAACTTGTGTCAAGAATCGTTGGGAGCTTGTA
TCCGACGATCTGGTGGTTGAATTGATTGATTCAAATCTGAAGAAACCAGA
ATGTAAGAATGGATTTCTTTTGGACGGTTTCCCAAGAACTGTACCACAAG
CTGAAAAGTCTCAACGGTTGATTGAAAAATATTGCATCTGTCATTTGGCT
ACTGGAGATTTATTACGAGCTGTCATTGCATCAGGATCAGATCTTGGAAA
GAAAATAAAGGGTGTAATTGATGCTGGACAGATGGCACCACAACAAGCAC
AGGCAGCACCAGAAACACCTAAAGGAATCAATGGAATCCTTCTTGGTCCA
CCAGGAGCAGGAAAAGGTACCCAGATCACCGGTGAGCCATTAACAAGACG
ATCAGACGATAATGAAGAAGCTCTCCGCAAACGTTTAGCATCCTTCCACA
AATCTACATCACCTTTAGTCAACTTCTATCAAAAACGTGGAATTCATAGC
GCCGTCAATGCCGACCGATCCATGGACGCTGTTTTCGCTTCTATATCCGC
CATCTTTGATGAAGCACGCGACAAAAGATCATAAATTATTCCACATCAAA
AGCGGTAGATCGTATCACGAAGTTTTCAATCCACCCAAAAAAACAATGAC
TGATGACTTGGATGATTTATTAGAAGAGCGAGGCACACCACTTGACCGGG
TCATTGAGATGAAAATTGACGAAGAAAAACTTGTGTCAAGAATCGTTGGG
AGCTTGTATCCGACGATCTGGTGGTTGAATTGATTGATTCAAATCTGAAG
AAACCAGAATGTAAGAATGGATTTCTTTTGGACGGTTTCCCAAGAACTGT
ACCACAAGCTGAAAAGTCTCAACGGTTGATTGAAAAATATTGCATCTGTC
ATTTGGCTACTGGAGATTTATTACGAGCTGTCATTGCATCAGGATCAGAT
CTTGGAAAGAAAATAAAGGGTGTAATTGATGCTGGACAGATGGCACCACA
ACAAGCACAGGCAGCACCAGAAACACCTAAAGGAATCAATGGAATCCTTC
TTGGTCCACCAGGAGCAGGAAAAGGTACCCAGATCACCGGTGAGCCATTA
ACAAGACGATCAGACGATAATGAAGAAGCTCTCCGCAAACGTTTAGCATC
CTTCCACAAATCTACATCACCTTTAGTCAACTTCTATCAAAAACGTGGAA
TTCATAGCGCCGTCAATGCCGACCGATCCATGGACGCTGTTTTCGCTTCT
ATATCCGCCATCTTTGATGAAGCACGCGACAAAAGATCATAAATTATTCC
ACATCAAAAGCGGTAGATCGTATCACGAAGTTTTCAATCCACCCAAAAAA
ACAATGACTGATGACTTGGATGATTTATTAGAAGAGCGAGGCACACCACT
TGACCGGGTCATTGAGATGAAAATTGACGAAGAAAAACTTGTGTCAAGAA
TCGTTGGGAGCTTGTATCCGACGATCTGGTGGTTGAATTGATTGATTCAA
ATCTGAAGAAACCAGAATGTAAGAATGGATTTCTTTTGGACGGTTTCCCA
AGAACTGTACCACAAGCTGAAAAGTCTCAACGGTTGATTGAAAAATATTG
CATCTGTCATTTGGCTACTGGAGATTTATTACGAGCTGTCATTGCATCAG
GATCAGATCTTGGAAAGAAAATAAAGGGTGTAATTGATGCTGGACAGATG
GCACCACAACAAGCACAGGCAGCACCAGAAACACCTAAAGGAATCAATGG
AATCCTTCTTGGTCCACCAGGAGCAGGAAAAGGTACCCAGATCACCGGTG
AGCCATTAACAAGACGATCAGACGATAATGAAGAAGCTCTCCGCAAACGT
TTAGCATCCTTCCACAAATCTACATCACCTTTAGTCAACTTCTATCAAAA
ACGTGGAATTCATAGCGCCGTCAATGCCGACCGATCCATGGACGCTGTTT
TCGCTTCTATATCCGCCATCTTTGATGAAGCACGCGACAAAAGATCATAA
ATTATTCCACATCAAAAGCGGTAGATCGTATCACGAAGTTTTCAATCCAC
CCAAAAAAACAATGACTGATGACTTGGATGATTTATTAGAAGAGCGAGGC
ACACCACTTGACCGGGTCATTGAGATGAAAATTGACGAAGAAAAACTTGT
GTCAAGAATCGTTGGGAGCTTGTATCCGACGATCTGGTGGTTGAATTGAT
TGATTCAAATCTGAAGAAACCAGAATGTAAGAATGGATTTCTTTTGGACG
GTTTCCCAAGAACTGTACCACAAGCTGAAAAGTCTCAACGGTTGATTGAA
AAATATTGCATCTGTCATTTGGCTACTGGAGATTTATTACGAGCTGTCAT
TGCATCAGGATCAGATCTTGGAAAGAAAATAAAGGGTGTAATTGATGCTG
GACAGATGGCACCACAACAAGCACAGGCAGCACCAGAAACACCTAAAGGA
ATCAATGGAATCCTTCTTGGTCCACCAGGAGCAGGAAAAGGTACCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045773XLOC_045773Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073717-proteinTCONS_00073717-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073717-exon-scaffold_97-1575043694:393350..393597TCONS_00073717-exon-scaffold_97-1575043694:393350..393597Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1575043694:388515..388637TCONS_00073717-exon-scaffold_97-1575043694:388515..388637Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1575043694:388037..388150TCONS_00073717-exon-scaffold_97-1575043694:388037..388150Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1575043694:387590..387684TCONS_00073717-exon-scaffold_97-1575043694:387590..387684Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1575043694:387256..387328TCONS_00073717-exon-scaffold_97-1575043694:387256..387328Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1575043694:385251..386548TCONS_00073717-exon-scaffold_97-1575043694:385251..386548Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1510915933:393350..393597TCONS_00073717-exon-scaffold_97-1510915933:393350..393597Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1510915933:388515..388637TCONS_00073717-exon-scaffold_97-1510915933:388515..388637Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1510915933:388037..388150TCONS_00073717-exon-scaffold_97-1510915933:388037..388150Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1510915933:387590..387684TCONS_00073717-exon-scaffold_97-1510915933:387590..387684Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1510915933:387256..387328TCONS_00073717-exon-scaffold_97-1510915933:387256..387328Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1510915933:385251..386548TCONS_00073717-exon-scaffold_97-1510915933:385251..386548Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1491911889:393350..393597TCONS_00073717-exon-scaffold_97-1491911889:393350..393597Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1491911889:388515..388637TCONS_00073717-exon-scaffold_97-1491911889:388515..388637Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1491911889:388037..388150TCONS_00073717-exon-scaffold_97-1491911889:388037..388150Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1491911889:387590..387684TCONS_00073717-exon-scaffold_97-1491911889:387590..387684Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1491911889:387256..387328TCONS_00073717-exon-scaffold_97-1491911889:387256..387328Clytia hemisphaericaexon
TCONS_00073717-exon-scaffold_97-1491911889:385251..386548TCONS_00073717-exon-scaffold_97-1491911889:385251..386548Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:385251..393597 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
113.358	110.82	205.022	217.39	24.0317	17.8399	53.4936	56.9682	66.0398	68.8974	73.3111	66.2316	72.614	80.207	83.415	87.7672	98.9641	94.9318	33.2755	36.5874	58.837	62.1515	69.8906	74.1981	63.6524	71.991	71.9094	76.9522	33.8394	37.1255
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000850Adenylat/UMP-CMP_kin
IPR006259Adenyl_kin_sub
IPR007862Adenylate_kinase_lid-dom
IPR033690Adenylat_kinase_CS
IPR028587AK2
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006172ADP biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0019205nucleobase-containing compound kinase activity
GO:0005524ATP binding
GO:0004017adenylate kinase activity
GO:0016776phosphotransferase activity, phosphate group as acceptor
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006172 ADP biosynthetic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
molecular_function GO:0004017 adenylate kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0019205 nucleobase-containing compound kinase activity
molecular_function GO:0016776 phosphotransferase activity, phosphate group as acceptor
Blast
[Close]
BLAST of TCONS_00073717 vs. Swiss-Prot (Human)
Match: KAD2 (Adenylate kinase 2, mitochondrial OS=Homo sapiens GN=AK2 PE=1 SV=2)

HSP 1 Score: 312.768 bits (800), Expect = 2.467e-101
Identity = 147/223 (65.92%), Postives = 180/223 (80.72%), Query Frame = 3 
Query:  186 ETPKGINGILLGPPGAGKGTQSQRLIEKYCICHLATGDLLRAVIASGSDLGKKIKGVIDAGQLVSDDLVVELIDSNLKKPECKNGFLLDGFPRTVPQAEKLDDLLEERGTPLDRVIEMKIDEEKLVSRIVGRLFHIKSGRSYHEVFNPPKKTMTDDITGEPLTRRSDDNEEALRKRLASFHKSTSPLVNFYQKRGIHSAVNADRSMDAVFASISAIFDEARDK 854
            E PKGI  +LLGPPGAGKGTQ+ RL E +C+CHLATGD+LRA++ASGS+LGKK+K  +DAG+LVSD++VVELI+ NL+ P CKNGFLLDGFPRTV QAE LDDL+E+R   LD VIE  I +  L+ RI GRL H KSGRSYHE FNPPK+ M DDITGEPL RRSDDNE+AL+ RL ++H  T+PL+ +Y+KRGIHSA++A ++ D VFASI A F +A  K
Sbjct:   11 EYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCK 233
The following BLAST results are available for this feature:
BLAST of TCONS_00073717 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KAD22.467e-10165.92Adenylate kinase 2, mitochondrial OS=Homo sapiens ... [more]
back to top