TCONS_00073683 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073683
Unique NameTCONS_00073683
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1591

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073683 ID=TCONS_00073683|Name=TCONS_00073683|organism=Clytia hemisphaerica|type=transcript|length=1591bp
gAAATGCCTATTGAAAACTCAAGaaCTCCAATACCGGAAAACGAATCGAC
CATTGGTGATCAACGTCCTATACATATCGACCGCGTGCCTGCATCCACGG
CTCTTGGCTTAGGCATTATCGGAGGTAATCATATTGGAATTTTCATCTCG
GATATCCAGAAAGGAAGTTTAGCATCACAATCGAACCTACGGTGTGGTGA
CCAAATTCTAAAGTACAATGATAAAGACATGGGTAACATTACCTTAGAAG
AAGCCATCTTGGAATTGGGCAAACATACTGAAGTATCAGACTTACAGGTT
CAATACAATCCGCCAGGATATCGCAAAGCCCAAACACAAGCCAACGATTC
TTTCTACGTCCGCGCTCAATTCGATCGTTTCCCGCATGGGAAAGGAGAGC
TTAGTTTCAGGAAAGGAGACATCCTTCACGTGACCGAAACTTTTTACAAA
GGACAGTTGGGTGTCTGGAGAGCTAGTATTGTCAATGATAATGAAACGAC
AAAACCTTCGAGCGGAAAGTTGACGAAAGGAAAAATTCCAAGCAAAAGGA
AAGCGGAACAAGAACTATTACTACGGCGATCCTCATCTTACGGCGACGAC
AAATCGAAGAATCGTAAATCGCTATTCCGTCGCTCCAAGAAAGGTTCTTC
GCATCACGCTATCAATCATTCTCGCGAGAGTAGTGATTCCAaagctgaaa
tcgaaagtacgGTTAGCGGTGGCACGTCCTTTGTTTTCATATCAGACGAC
TTCAACACATATCAATTCGTCAAACAGTTGGAGTGTAAATTCCCAAGACC
AGTTATTATCGTTGGTCCAATGGCCGAACCAATCTGTGATAAACTGGTCA
TCCATTGGAGTATGAATTTCGCACGCTGCTTTGAAGTGGTACACTCTACA
CAAGACGAGATGTCGGAGAACGTAGATAGCGGAACTTATCTGGATTACAA
ATTACGGAAAGGAGGTGATCGCTATGAGGTTGTCACTGCAAACGCTGTCA
AAGAATTCTCTCAAAAACAGACGAAACATTGTTTGTTGGATATCAACATG
GACGCCATCGAAAGAATCATTAACGCTCATCTATACCCTATcattattta
tttaaaattcaaatcTGGTAAAATCATAAAAGATATGAGGGACGGACATT
TCATCAAAGACAAACTATCGACAAAAGAGGCTAAAGATTTGTACGATACT
TACctcaaacaagaaaaagattctaaacattttttcaatGTGACAATCAA
CGCGGTCAGCAATTTGCACCAAGTTTGCAAAGATATCAACGATGCTGTTT
TGGAACAACAAAAGAAAGCTTTATGGGTCAACAatgatgaataaaagaaa
atcaccGATCTCTAAAATCTAGGCTGAAAAAATTATCTCCTAATTTGACA
AACGGCAAATTGTTCCCAGGATCATAGATTTCTTAAATTTCTGCtaatcc
tctagcgaaaagagtttctgataggaagtatatctctagaggtctgcgat
tcagataATTAATTTCGAGAATCAATAGTACAATACAATGAACTTAATTT
CTTGATAACAAGCAATCTCTATCTATCATAAGTGTTATTCG
Run BLAST on NCBI

transcript from alignment at scaffold_97:871516..887342+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073683 ID=TCONS_00073683|Name=TCONS_00073683|organism=Clytia hemisphaerica|type=transcript|length=15827bp|location=Sequence derived from alignment at scaffold_97:871516..887342+ (Clytia hemisphaerica)
gAAATGCCTATTGAAAACTCAAGGTAAATCTTTTATAGAAGGAAAATcat atgatatttttttttcatccacACACTCACACATACACTTATTTAATGCA TACACACCTtaaggctggtctccacttgcgcacgCTGTAATCGCAGtttt tggcttcaatcttttttgcttggaaaaaagattacgtcataaaaatgtag cgcgcgctcgaaagaaaagttgaacacatttcaactttttccaaccgtta cgtcagatcgcaccaatggagttgcttcatttttcttttgaccaatagcg tggaagctttgcttgAAAAGTGCGACttaagcgcgcgcaagtggagaccg gcctttatacagttgactctcgctaattcgaagtCAAACGGGAAAGTcta atttgttcaaatttcgaAAGGTTTTTCTTTGACGGggtgaaaaatacaaa atgacaaaatgacaaaaaaaaaacagaaattttCTGGTTTGTTCGATGGa gccattttttgagtttttacaaTAAACCATTAAAAATTCTATTATATAac ttcaaaatatcttcaaaaaaattcaggaaattcTAGAGATTAGTTTTTTT ATAGCAacaaaattgagtaattttatCACCATgaattttgatatcttttt gGATTCAAATGATTATAGGGAATGAGGCAGTTAAGCGGCGgactgagaat tagttcgaattatagaaagactcgaataatagaagttcgaattagcgaga gtccatTGTGAGACAAAATGGCCTTTATAGTTTACTGATTCTTAGTAATC TGTCATCACAAGCGACTttaaatgcaattaaaatggaACGTCTCCGTGTA AAACGAACAATACGAAACGTTCTTTAACATTTAGGAAGGTTCttgtttag acggccgactttctgccctgcctattatAATTGTTTGAGTAGGCGAAAAG TGGGCGCAAAGTTGGTGCTGAAATCTTTGCTTCGAAAGTCTTCGAAGACT TTGCATTggcacaattagaataggcagggtgGAAAGTgtgccgtctaaac tagagctaagaacGGGAGAGAACGATCTTGTTCGTTCCCTTTATTTACTA GTTTAGGCGTGTCTTAGAAAGTTCAGGGACGGTTAAGAATGTTTATTAAC GTTCCTTAAACGTACCTGAGCGTTCTAACCAAGTTGAATATTAACCTttg aaaacaaagttttgtcCGCAAGCGTTCTGGAACGATCAAGAAAGTTCTTA AACATTTTCCAGGAGCGCTACGGAACCTTCAGGAGCGTCTCAAGgacatt tcatttcatttgtatTTCAAATCGCTTGTGAATAGATCTTAtatatcgga gttttttatttttctaaaaaagcaatgcattgtgggattgtttcgggagt cttgcaatagaatttcttcgaggatttctattgtaatactcccgaaacaa tcccacaatgcatcgcttttttagaaaaataaaaaaatccgataagatct attacaCATATTAGCTGACGTACCAGTACAAATAACTTTACGCACTTTTC TATgtacttccttcaacttttcattttctctagTACGCAATCGACACCAT GCACTCCACGCAGATCAGTTATATCGTCTCCCGCTTTCAATAAACGAGCC GGGCGGAATTCTGTCTCAGGGTTGACCGGAAATCTGTCCGCCCCCGGAAC GCCCGTCACAATGCACGTACGCCTGAGTTCAAACACAAGTTCGTCTTCTG ACCACTCTAAATTCTATTattcagaaaataaaatgtaagTTAACGAAGAT ATAATTCCAAATAGCTCTCATCTCGATCTTTACACTTGTACTTTGAAATT taacagaaactttcgcgggcagaaactcTCGCGAGGttgcaaaatcgcga aatttcgcgaatttaactTTTGGAacgaattttagaattttattttGCAG GCAAAAAGCGATAAAAATGCACAAAAGCTGAAAACTGAgtataaaataac aaaaaagtgtacttttggtgggaaaatttctcgtgtaatttcttacttgg cagaaagtttcggaaaaaagggcaaaaatcgCGAAAAGTTTCTACCCGCG AAAGTTTCGGGTTAATTCAGAAAAGGATCCGTCTTGAACGTAAAGTAAAT GCCACAAACTAGACTCATTCAAGCGCATCAAAGCTAATAGCCTAGACAAA GAAAACTCCTAAAAGAGACACGCTAAGCACACTGGGGCTAAGATAAAATC AATCGatttaatcaattaaaattgcgttttattatttattagaaCTCCAA TACCGGAAAACGAATCGACCATTGGTGATCAACGTCCTATACATATCGAC CGCGTGCCTGCATCCACGGCTCTTGGCTTAGGTAAGCaatgttaaaagtt cttccatCTCAGGTGGATTTCTTTTCTGTCTAGGTGAAGTATGAAGTTAC TTTTCTGTCTCCAAGTTCTGCgtaattgaccaaaatttcaaggaaTATGT GCTAATTTTCTGTGTAACAAATTATTTCCTGTCTCAAACGAAAAACCTTT GACTACTGGGTAAGgtgaacttcaaaaatcatttctcaGACTTTTAAAGA ATCAGTATTAACCGTGCTAACATATAGGCCAtctcacagtcgcaaagcgt aatgggtaatcaggactgcgCTCTAATGACggcttactattggtccaaag ttttgaaaaattttgaagattatttCCCGTCTAGCCAACAGAAAGCCGTT ATGGAAGTgtaatcagtcctgattacccatgatccatttcgactgtgaaa tggcctattttgGGACAGATCAATAAGGAGCAATGGCCAAGTGGTTTAAG GCGCTAGCGCTAAAATTGAAGAGTTCCCAGTTCGAATCCTttctccttcc aatgttccgttcagtccATTGATAATCAAGTCGGCTGGTAGTGAACCATT GAACTATCTAGAAATCCTCGATTACTGAGATTTCTATTTTCGAACGTTTA TAATGAAATTACGCGTTGGAATGAGACGATATGATACTCGAGGCCTctct tttcaaaattgaatCCCTTAAAATAGATcccaggcccggcggaacaaccg taaaattGGGGAGTCTGAAGGctaaaaatgagctaaaattcgCTAGCAAT TTGAgaagaaaaatctcttttgcTCAAAAAtagggaggctgaagtctccc cgatcttcccgcttccgccgggcctggaTCCTCTGCAATAAGAATCTGAA TCACTACCTTTTCATGACTTTCACAACAGGCATTATCGGAGGTAATCATA TTGGAATTTTCATCTCGGATATCCAGAAAGGAAGTTTAGCATCACAATCG AACCTACGGTGTGGTGACCAAATTCTAAAGGTAAACTTCTTATCAATGTT CAACCGGGGTCTTGAAAATTGACAATTAGTTTTAAAAATACCGCTTCgtt gaaatcaccaaaaaaattgACCTAATGTCAACCAAGAAAATTTGGTAGTA CAGTGGAGTCTATTTACCTCGAACCTCTATAAGTCGaatgtctccataac tcgaacaagctttctcgttccttcagttaacaatgccttaaagGCTACAT acacacaatatattgtcaggcaatacaTTGATCATATACTGCTGAGTGCC GGCagtatattgaaaaggtgtccgcaatgtATTGTCAGTttgatttgcaa ttttccaacaatatagggggattgttacagaaagaaaattccttttttta ataGAGGTCAGGATATATTATTTACTttgtacattacggtccgaaaatga tattgtcaaatattgtttgtcaatatattgtgtagccCTTTACAAACCCT ActcaataactcgaaatttccttagcTCGAACAAATTTTAATTCCCCGTG CGTTTTCGAGctatggagactcaactgttTGATATAATGTAGTCCACGCA AAACTTTTTTCCTCACCTTAACAGTACAATGATAAAGACATGGGTAACAT TACCTTAGAAGAAGCCATCTTGGAATTGGGCAAACATACTGAAGTATCAG ACTTACAGGTTCAATACAATCCGCCAGGTAAGTGTAACCATGGTAACCAT CTCCTGTTTTATAGCtctacaatcggcgccgaaatatattgacaattttg ggtattttaacgttttttagaatttaaagctcgggcgagaattgcagttt cagtacttccactttgtttcattgcATTTTTCGATTCGGGAGGGCTGAGT GGCTCCCGGAGTGGCTTCCAGACTATATTCTCAGctttttggaacatttt tgagcttttagatcctgagatcacAATGTCTAatattaaaactcagagtt aaaactctactttccaaccgtactttagagcacttaaaaatcacttgcgg ttttaaagttttgaggaaatttccattttgtgccaaatatttcggcgccg attgtagaAGTTGTATTTTGTCGttacataaggcttcgatggacaTAATA TTAAgaacgaggggtaaatcactaaaaattaggtgtacgagattttgatt tctttttgatttttgatttctttttgatttctttttgatttttgattttt ttttgatttctttttgatttttgatttctttttgatttccttttgatttc tgatttctttttgatttctttttgatttttgatctttttttttgattttt ttttgatttttgattttttttttgatttttattttgatttctttttgaat tctttttgatttctgatttctttttgatttctttttgatttttgatttct ttttgatttctttttgatttttgatttctttttgatttctttttgatttt tgatttctttttgatttctttttgatttttgatttctttttgatttcttt ttgatttctgatttctttttgatttctttttgatttctgatttctttttg atttctttttgatttttgattttttttttgatttttttttcgattttttt tttatttttgatttctttttgatttctttttgatttctttttgatttctg atttcattATGATTTctgtttgatttttgatttctttttgatttcttttt gatttttgatttcttttttatttctttttgatttttgatttctttttgat ttctttttgatttttcaaaaaggtgtacgtgatttttttcagtgatttac ccctcgattaagaacaagttgagggCGTTTTAAAGGGTTTATAGATTTCA Aaatacccgatttcttaagaaatcgcacaaaaatactcccaaaattgtga aattaagactattttcagaacattttttaggctcaaaactcaaaatgtta agaacattgaaaggcttcaaaaatttaactggtattataaaaaaagtcgT GTATTTAATTTGTCTAACTATAATCAAACCAAAGGAAGTCTGTCTGTCTT TTATACACGATGAGCCGAGGGCTGTCGCCCTCTTAAATTCACAGTTGATA TTAGTGATTTCCTCACAAGTTTTTAAAGTTGTAccattaaaaaaacaaac gcCTGACCAGTGAAGCACTAAAACATAATTTGATCGGCTGTATAGTTGTT ACTATATGAACACTGTCATCCAAGGAAGATTTAAACACCCAGACCACAAA CCATCCTAATCATTTCACTCTCAATATATAAAGAAGAAACATCCCAAGGA TCTCCTTGACTATTTAAAATCGTAATCATTCTGCTCTCAAGGGCCATTTT TTGTTAAATAAGAATAACCTTAAGTAAATAACGATTTTCGTGTGACCATG TTTTCTCTGTGTCACCttttaaaaacgaaaataaaaatattttcaaaatt ttttcataaagGAAGTTTTTTTGGAGAAGGAAAAATGAATTTGTCCTGTT TGGGCTTTTCGCTAAACAATTTACAAAatcgaatttaagaaatattagAA TTCacaacgtttttttaataaacaatcaaataacttcaaaaaaaaaaaag aaggctGAAAAAAGTTTCCTGTTATTATTTCCCCGGTAATACAACCAGAA TCCGGAGAAAATTTCCGTTCAtaagtttttccaaatttctagTCTATAGT TTTTTTACTGTGCCATACCTAATGCTAAATTTAGTAATAACTGCgttgta aaaacaaaaaaggaaacaGTGAGGTCACCTCGCCATAGATCACTTTCTAA ACATtgacgaaagaaaaaaaacctcGTAGAGATGCatacttttttctaaa atggtCTTTCTCCTTTAATGGCATATTCCCCTCGATGGAAGACTTTCTTA AATTGTTTAACCAATTGTCAATTTTAAATACTCTCAAATATTTTAAGACC GGCTCTTGGAGATCTACATTAATCCATTAAATGGCATCTTTATAAGATTG TCCGATATTTACGGTCCTGTACCGGAAGGTCTAAAACAAttcgaaaaaaa caacaaatatttCTTCGTTGGCCCTTTACGACATTTTTTAAACCCCTCTA CATCTTTTTCGAAtacagtttttttttctataagaacaaactgtataaga acataaggcttcgatagcaaaaatattaagttcggaacattttaaagctt tttggactctaaaacaccaaattcCTTTAGGTAAATGGACAAAGAGGAAG TCgctaaatggtgaaaataagaccatttaagaccatttttaggcttaaaa caaaactcaaaaagttaagaacatccgaaagctacACAAATTCATTCTTC GCGCCATTGAATACGTAGCATCAAAATTGTTTATAAATGTTTACATAATT TTAACAGTGTTTTAAGCTGaggttcattttatttttttcctggtCCTCAC TTGTATATTTCCTTATACCATTTATCATTCAGGATATCGCAAAGCCCAAA CACAAGCCAACGATTCTTTCTACGTCCGCGCTCAATTCGATCGTTTCCCG CATGGGAAAGGAGAGCTTAGTTTCAGGAAAGGAGACATCCTTCACGTGAC CGAAACTTTTTACAAAGGACAGTTGGGTGTCTGGAGAGCTAGTATTGTCA ATGATAATGAAACGACAAAACCTTCGAGCGGAAAGTTGACGAAAGGAAAA ATTCCAAGCAAAAGGAAGTAAGGAAGAACCTCTTTTCTTTAAaccctttt ttctttaaaaggtttaTTTGCTACATAAACATAAAACACTTTTTATTTGA TAGTtcttaaaggccggtctccacttgcgcgcgctgtgaTTTCACTTTTG AATGCTACATGCtattgatcaaaagaaaaatgaaacaatttcaTGGGCGC AATCTGACGTAAcggattgaaaaaattgaaatgtattcaacttttttttt ccaagcaaaaatgtACCAAAAGGTGAGAACGCAGCACgggcaagtggaga ccggccttaaaaaaATTACTATGACCGTAGTGCAAAGGTAGAAATTCCGg gaaatggtacttgatgctcaTTTGCTAAGTACTCAGTAattagatagcta tcgaaagaggagccttttgATCGCCTGCGACCACGGTCGCGCAGACTTTC TTACcttattggccttttttatgCTGGCCCTAATAAGCACCGTCTCTTAT TAAGCCAAAGCTTTTAGCCGGATCCTCATTAATTCCCGATCCCTTACGCC GACCCTTATTACGCAAACGACGAAAAAATACTGCTAATAAGGGCTGGCAT AAAAAGGCCGGTATTAAGGTATTTATAAAAATACTACGGTGATTCTTACC ATTTTTCACATCTCTGTAGAGCGGAACAAGAACTATTACTACGGCGATCC TCATCTTACGGCGACGACAAATCGAAGAATCGTAAATCGCTATTCCGTCG CTCCAAGAAAGGTTCTTCGCATCACGCTATCAATCATTCTCGCGAGAGTA GTGATTCCAaagctgaaatcgaaagtacgGTTAGCGGTGGCACGTCCTTT GTTTTCATATCAGGTAGGTTATCTAAACTCATTATTATCCTTTTTGAAAC TGCATACTTTACATCGAGTTTTTCTTTAGGTTTTCATTccttgagtttaa agcccgaaaagctagagtagaatctctaacctttacAGGCAAAAAAAGAT GAATGCGCCGCAATTATGACGACGGGTTGTATCTAGCAGTACCTTTGTTT TTGATGACTGCATTCTTTAAAATCTaccgatagattttactttcaatccg gtgtttgtgtaaaaaccacgtgTGGGCGTTCTGGATTGGAATtaaatggc ttcatttccctTCCGGAGTCTaaagtctagcccttcgggctttgaACTCT ATGTTTTCATTATCTTTATCTGTTATTTAGCACAGTGAACTTTTTGTTTT GTACTATTATCAAACACTCACCATAGCGACGTTAAGTTTCAATAGAGTAG AGACGGACGGGTTTCTGCACACTATGGTATATTCCACAGGCTTACCCTCG CACTGCGCAAATTagtttactcaaaatttatcttcCATTAGGCCCGGCGA ATGGCGAATTTTGCCTgtccaaggcacgaaaaaattCCAATTCGCCGGTT TAAAATTTCGGTTCGCTGCCTCAAGTACATATTCACGCCAAACAACACAC ACTGTGCTTTCTAAGTATTCACCGGCCTCGAATCTAGAGTTCGTCGGAGT TAATTTTCCATTCATCAGCCTATCAAGAACAAAACAAATCCTTGTAATGA GGGGGAAAAGTGTATGTTTTTTATACATCAAACTTTATTAGAGAGTGTCT AGTTATAgagatttttttcttaacctttttcaGANATATTAAGTTcggaa cattttaaagctttttggactctaaaacaccaaattcCTTTAGGTAAATG GACAAAGAGGAAGTCgctaaatggtgaaaataagaccatttaagaccatt tttaggcttaaaacaaaactcaaaaagttaagaacatccgaaagctacAC AAATTCATTCTTCGCGCCATTGAATACGTAGCATCAAAATTGTTTATAAA TGTTTACATAATTTTAACAGTGTTTTAAGCTGaggttcattttatttttt tcctggtCCTCACTTGTATATTTCCTTATACCATTTATCATTCAGGATAT CGCAAAGCCCAAACACAAGCCAACGATTCTTTCTACGTCCGCGCTCAATT CGATCGTTTCCCGCATGGGAAAGGAGAGCTTAGTTTCAGGAAAGGAGACA TCCTTCACGTGACCGAAACTTTTTACAAAGGACAGTTGGGTGTCTGGAGA GCTAGTATTGTCAATGATAATGAAACGACAAAACCTTCGAGCGGAAAGTT GACGAAAGGAAAAATTCCAAGCAAAAGGAAGTAAGGAAGAACCTCTTTTC TTTAAacccttttttctttaaaaggtttaTTTGCTACATAAACATAAAAC ACTTTTTATTTGATAGTtcttaaaggccggtctccacttgcgcgcgctgt gaTTTCACTTTTGAATGCTACATGCtattgatcaaaagaaaaatgaaaca atttcaTGGGCGCAATCTGACGTAAcggattgaaaaaattgaaatgtatt caactttttttttccaagcaaaaatgtACCAAAAGGTGAGaacgcagcgc gcgcaagtggagaccggcctttagaaaATTACTGNTAAGTTTCAATAGAG TAGAGACGGACGGGTTTCTGCACACTATGGTATATTCCACAGGCTTACCC TCGCACTGCGCAAATTagtttactcaaaatttatcttcCATTAGGCCCGG CGAATGGCGAATTTTGCCTgtccaaggcacgaaaaaattCCAATTCGCCG GTTTAAAATTTCGGTTCGCTGCCTCAAGTACATATTCACGCCAAACAACA CACACTGTGCTTTCTAAGTATTCACCGGCCTCGAATCTAGAGTTCGTCGG AGTTAATTTTCCATTCATCAGCCTATCAAGAACAAAACAAATCCTTGTAA TGAGGGGGAAAAGTGTATGTTTTTTATACATCAAACTTTATTAGAGAGTG TCTAGTTATAgagatttttttcttaacctttttcaGACGACTTCAACACA TATCAATTCGTCAAACAGTTGGAGTGTAAATTCCCAAGACCAGTTATTAT CGTTGGTCCAATGGCCGAACCAATCTGTGATAAACTGGTCATCCATTGGA GTATGAATTTCGCACGCTGCTTTGAAGGTAAgatttatttataatttttt cgtTATTTCCTTCCTTTACCTACAaccatggtcgaaatatattgagattt tagggtattttaacgtttttcagaatttaaagttccggcAAGAATTGCTA TCTTAGCACTTCCATATTttatcattgaatatttcgattttggagggggt TTTATGGGTTCTAGGCCATATTCCAAGCGTTGTTCAGCTAGGAaagccat ccaggatcctgccattctatcagctaacaaaaactgaatgacacttgtaa acttaagttttttactatttcccatcgaaaacaatcaagaacattactac ttcccaaagccggagaccaaagcaaatgaTCTTCCTTAATGAGGGCGCCC TTTTGAACTATTGTTAAcacatttaaaatggtggacagagttgcgTAATG ATATAGGTGTCcgctgcttcgagggtggtaacgccaaaacgcgcAATATG ATCATTCAACAGAAGGCAAGTTTTTTGCAACGTACGGcatttcacaatta taagaatatcttatgtgcttaattctatttgactttgagagcttcattga agatgaagaagtagaaagataAAAANCCTAAAGTTTGTGGAAACTGGGTT TGAGTTTACCAAAAAGAAAgaagttaaaatttttcaagtcgttgcattga cattctcataaaactattaattttgacgtcattttccaTCTCTCCTTAAG ACTGCCCCTGCTGTCTTTCAatgcagttgacgctctcttattcgacgttc tactattccaCGCGCTCCATTATTCGGTAATATTGAAAATCACTGTCAAC ATAAAACTCTCAAGAACggcgctcccttattcgatatgtattcccctcta aaatcgaattAGGGAGCGtctcttattcgacgttctaATATTCCACACGC TCCATTTTTCGGTAATAGTGAAAATCACTGTCAACAAAAAAACTCTCACG AACGGCGCTCTACTATTTGGAACGCtcctttattcgatgaaaacTGTATT CTctgcgaaaatcgaattaggGAGCGTCTCTTATCGACGTTCTTCTATTC CACGCGCTCCATTTTTCGGTAATATTGAAAATCACTGTCAACATAAAACT CTCACGAACGGCGctttactattcgatacgctcccttattcgatgaaaat gtagttcgaattagagagtgtcaactgtattaacttttcctttacTTTTA ACACCACAGTGGTACACTCTACACAAGACGAGATGTCGGAGAACGTAGAT AGCGGAACTTATCTGGATTACAAATTACGGAAAGGAGGTGATCGCTATGA GGTTGTCACTGCAAACGCTGTCAAAGAATTCTCTCAAAAACAGGTATGTC TCATTGCTCTGTGATTACGTCATTGAGCGAGTGGTAAAAGAAGCATTTTT ACCtgatattatttgaaaaaaatttNATCCAagacacaaaattttggcgT CAATCCTTCTttagtagcgagtttatgtatgtgtgtttttcagcgacgga gacggtaaggttctaatttggctagatcctatccagccgaagacgacggt aaatcagcacttttaccgtcctcgattttgcggggcggaattgcgggttt ttccaaatcgctccagtcactctaccgtctcTACCTAAGTGCAAATACAT ACACTCGGTAGTGTTTAGGGCTGCAACCTAAAGTTTGTGGAAACTGGGTT TGAGTTTACCAAAAAGAAAgaagttaaaatttttcaagtcgttgcattga cattctcataaaactattaattttgacgtcattttccaTCTCTCCTTAAG ACTGCCCCTGCTGTCTTTCAatgcagttgacgctctcttattcgacgttc tactattccaCGCGCTCCATTATTCGGTAATATTGAAAATCACTGTCAAC ATAAAACTCTCAAGAACggcgctcccttattcgatatgtattcccctcta aaatcgaattAGGGAGCGtctcttattcgacgttctaATATTCCACACGC TCCATTTTTCGGTAATAGTGAAAATCACTGTCAACAAAAAAACTCTCACG AACGGCGCTCTACTATTTGGAACGCtcctttattcgatgaaaacTGTATT CTctgcgaaaatcgaattaggGAGCGTCTCTTATCGACGTTCTTCTATTC CACGCGCTCCATTTTTCGGTAATATTGAAAATCACTGTCAACATAAAACT CTCACGAACGGCGctttactattcgatacgctcccttattcgatgaaaat gtagttcgaattagagagtgtcaactgtattaacttttcctttacTTTTA ACACCACAGTGGTACACTCTACACAAGACGAGATGTCGGAGAACGTAGAT AGCGGAACTTATCTGGATTACAAATTACGGAAAGGAGGTGATCGCTATGA GGTTGTCACTGCAAACGCTGTCAAAGAATTCTCTCAAAAACAGGTATGTC TCATTGCTCTGTGATTACGTCATTGAGCGAGTGGTAAAAGAAGCATTTTT ACCtgatattatttgaaaaaaatttattttcgagcGCCAAGTCTTTTCTG ACATAATCATTAACTAACTGGTTAATAGACCTTTTATAGATATTAATATT CAAACAACTACCATGGTGATTAAGTCCCTTGAGacatgaaataatttttt tatgattagaaagtagttttgataaaatccgctgggagttaatcaccatg acaataatttcaaaacgaggcaagtgatgttcgcaacgtaatttatgaaa aggtctatcggcTATCTacgaactgaacggaacattggaggAAGTGGGGA TTCGAACCAGGACACCATTGGCCATTCGGCCATCATTATTCATAATTTGC TCCGAGCactgtcattttcattttctttgactttttttagACGAAACATT GTTTGTTGGATATCAACATGGACGCCATCGAAAGAATCATTAACGCTCAT CTATACCCTATcattatttatttaaaattcaaatcTGGTAAAATCATAAA GTAAGTGTGTTTCCATACTGTACGCCCTGTTTCTCCATACTTAACGCCCC GTTTCCCTACTGTACGTCTTGTACGTCCATACTGCACGCCCCGTATTTTC ATATTGTACGCCCCGTATGTCCATACCATACGCCCTGTATCTTCATGNCT TCATTCCATACGCCCTGTATCTTCATGTTGTACGCCCCGTATTCCATATT GTACGCCCTGTATCTCCATACTTAATCTATTGGCAGATCATGCATTCTGC GCACACCACTAAAGGGTTGTCGTGGATGTGACGATCTGACCCGGCTGTTC ACCCAAAACAATTATCACAGTGTAgccttttgcttgaaaacgaaagcaaa TCGACGTGCTCAAAAGCTCCTATATATTCGTCCCAAATCTAGATGAAAAC ATCAAAGCCAACCTGGGCTTATTCTCTTACGAAGCCATGATCCTTAGAGT AATTGCGTTCCATGTTTTGAGAATCGGAAATTGCTCGGAAATTATTCcaa aattgaagcttgcaatcTTTGACAGAAAGCCTTAAAAGAGTGtattttac cccccccccccccaaNNNTAGAGTAATTGCGTTCCATGTTTTGAGAATCG GAAATTGCTCGGAAATTATTCCAAAATTGAAGCTTACAATCTTTGACAGA AAGCCTTAAAAGAGTGTATTTTACCCCTCCCCCCCAATATCAATGTTGAA TAGGAGGCCATCTTGGCCCTGGACAACATTGATACTGGACAACATCGATA CTGGGCAACATTGATACTGGGGGGAAGGGTTTCCTAGGGtcaaaaactgt taaaaaacaATTTGTGACAAATATTTTGTCTAAGATTGTACTTATTTAGA ATCCAATTCTGGTaaagttatgaaaaaacaaCAGCTGTATTCTTGCGTTT CGTTGGAGTTTTTTTAGCTTACAGGTATTAAATAATTAGATNCTGTATTC TTGCGTTTTGTTGGAGTTTTTTTAGCTTACAGGTATTAAATAATTAGATC CGACGGCACTTGTGAATAATTAGATATAATTTTACGGCGTTCTAAGATCA GGTTATCAAGGGACGCCTCACCTCTTGTATAAACGAAAGCCACTTGATGA AAACACCGGGTGtgtcacaaaaaagtttctctccttgaaactaattttct cgaaatctaaaaattttaaaagaaccatgcccattccattggaaagaaga aagataaacttaaattttgatgggtcatttattgaattcggttcattaga tcgaaagttgtgctcaatttaataaaaaagttacttttggaaagtgctca aaaacgttttaaaaatcGACCCCTGGTATCCATTTTACcatttcatgttt ttctgatacTGTTTTTTTACAGAGATATGAGGGACGGACATTTCATCAAA GACAAACTATCGACAAAAGAGGCTAAAGATTTGTACGATACTTACctcaa acaagaaaaagattctaaacattttttcaatGGTAAGTCAATAGTTAATG GACTAGTTCTCTGTACAATTTTGATCAAAAGTGTCATATTTCTTAGACTG AAGTcttttataatgcgtgtaatacagtagtatatgcgttatatgataat acgattattgtcacgggatttagtttgtataaaattgttccctccattac tttttgctttatttctactatgtctgaattagtcgtctagcttgctagac ttcATCATATTTCTCAAATGAAAGAATGGGGAGGATTCTCTTGGAGGGCT AGACATCTATAACCAGCAGCTTATTACATTACCTGCCGATAGACTGTGCC ACCTAATAATGTCAATTATCgactttaaaaataatttttgtttaccgTGA AGAAGaatttggtacaaacctaaacgtttttttatgtGGACAAACTTTAT AAAAACGTAAGGTTTCGAGgcctaaaatattaagaacaagctcaGAACAA AAGTCTTTACGGACTTTAAAACAcccatttttcagaaaattgcacaaaat atgaacatttaagtatttttcacatgcacgtaaaattttactttagatat taagaaaaattgttcgtaaggctgtctttggggaatttccccgacattat aacactacgtaagcttagggaaattcccaaaCCTTCAAGTTTTTAAGTAA ATTTTACGTACTTgcgaaaaaagctttaaaactcaaaaacttaaaaacat ccaaagacttgaaatttcttttggaTATTCTCgttaaaaagaactttttt tgattCGTTTTATTTAACTTTTCTAGTGACAATCAACGCGGTCAGCAATT TGCACCAAGTTTGCAAAGATATCAACGATGCTGTTTTGGAACAACAAAAG AAAGCTTTATGGGTCAACAatgatgaataaaagaaaatcaccGATCTCTA AAATCTAGGCTGAAAAAATTATCTCCTAATTTGACAAACGGCAAATTGTT CCCAGGATCATAGATTTCTTAAATTTCTGCtaatcctctagcgaaaagag tttctgataggaagtatatctctagaggtctgcgattcagataATTAATT TCGAGAATCAATAGTACAATACAATGAACTTAATTTCTTGATAACAAGCA ATCTCTATCTATCATAAGTGTTATTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045752XLOC_045752Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073683-exon-scaffold_97-1491911889:871516..871538TCONS_00073683-exon-scaffold_97-1491911889:871516..871538Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1510915933:871516..871538TCONS_00073683-exon-scaffold_97-1510915933:871516..871538Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1575043694:871516..871538TCONS_00073683-exon-scaffold_97-1575043694:871516..871538Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1491911889:873808..873896TCONS_00073683-exon-scaffold_97-1491911889:873808..873896Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1510915933:873808..873896TCONS_00073683-exon-scaffold_97-1510915933:873808..873896Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1575043694:873808..873896TCONS_00073683-exon-scaffold_97-1575043694:873808..873896Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1491911889:874795..874895TCONS_00073683-exon-scaffold_97-1491911889:874795..874895Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1510915933:874795..874895TCONS_00073683-exon-scaffold_97-1510915933:874795..874895Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1575043694:874795..874895TCONS_00073683-exon-scaffold_97-1575043694:874795..874895Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1491911889:875490..875592TCONS_00073683-exon-scaffold_97-1491911889:875490..875592Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1510915933:875490..875592TCONS_00073683-exon-scaffold_97-1510915933:875490..875592Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1575043694:875490..875592TCONS_00073683-exon-scaffold_97-1575043694:875490..875592Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1491911889:878398..878632TCONS_00073683-exon-scaffold_97-1491911889:878398..878632Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1510915933:878398..878632TCONS_00073683-exon-scaffold_97-1510915933:878398..878632Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1575043694:878398..878632TCONS_00073683-exon-scaffold_97-1575043694:878398..878632Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1491911889:879285..879478TCONS_00073683-exon-scaffold_97-1491911889:879285..879478Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1510915933:879285..879478TCONS_00073683-exon-scaffold_97-1510915933:879285..879478Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1575043694:879285..879478TCONS_00073683-exon-scaffold_97-1575043694:879285..879478Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1491911889:881552..881692TCONS_00073683-exon-scaffold_97-1491911889:881552..881692Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1510915933:881552..881692TCONS_00073683-exon-scaffold_97-1510915933:881552..881692Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1575043694:881552..881692TCONS_00073683-exon-scaffold_97-1575043694:881552..881692Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1491911889:882925..883058TCONS_00073683-exon-scaffold_97-1491911889:882925..883058Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1510915933:882925..883058TCONS_00073683-exon-scaffold_97-1510915933:882925..883058Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1575043694:882925..883058TCONS_00073683-exon-scaffold_97-1575043694:882925..883058Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1491911889:884606..884715TCONS_00073683-exon-scaffold_97-1491911889:884606..884715Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1510915933:884606..884715TCONS_00073683-exon-scaffold_97-1510915933:884606..884715Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1575043694:884606..884715TCONS_00073683-exon-scaffold_97-1575043694:884606..884715Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1491911889:886088..886197TCONS_00073683-exon-scaffold_97-1491911889:886088..886197Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1510915933:886088..886197TCONS_00073683-exon-scaffold_97-1510915933:886088..886197Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1575043694:886088..886197TCONS_00073683-exon-scaffold_97-1575043694:886088..886197Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1491911889:886992..887342TCONS_00073683-exon-scaffold_97-1491911889:886992..887342Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1510915933:886992..887342TCONS_00073683-exon-scaffold_97-1510915933:886992..887342Clytia hemisphaericaexon
TCONS_00073683-exon-scaffold_97-1575043694:886992..887342TCONS_00073683-exon-scaffold_97-1575043694:886992..887342Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:871516..887342 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.719051 1.00239e-09 0.740473 4.84326e-10 5.60914 2.87203 1.47408 4.92035 8.65403e-05 2.93189 1.99575 0.492017 1.26631e-06 1.37957 0.0832351 0.0188332 2.31312 2.01958 1.76313 1.26529 2.46294 0.503376 0.349198 0.499448 0.919966 2.32648 0.994111 0.535883 0.00038892 0.563942
Blast
BLAST of TCONS_00073683 vs. Swiss-Prot (Human)
Match: DLG5 (Disks large homolog 5 OS=Homo sapiens GN=DLG5 PE=1 SV=4)

HSP 1 Score: 216.083 bits (549), Expect = 1.640e-59
Identity = 135/389 (34.70%), Postives = 210/389 (53.98%), Query Frame = 1
Query:  196 GDQILKYNDKDMGNITLEEAILELGKHTEVSDLQVQYNPPGYRKAQTQANDSFYVRAQFDRFPHGKGELSFRKGDILHVTETFYKGQLGVWRASIVNDNETTKPSSGKLTKGKIPSKRKAEQELLLRRS-SSYGDDKSKN-------RKSLFRRSKKGSSHHAINHSRESS-DSKAEIESTVSGGTSFVFISDDFN-TYQFVKQLECKFPRPVIIVGPMAEPICDKLVIHWSMNFARC-FEVVHSTQDEMSENVDSGTYLDYKLRKGGDRYEVVTANAVKEFSQKQTKHCLLDINMDAIERIINAHLYPIIIYLKFKSGKIIKDMRDGHFIKDKLSTKEAKDLYDTYLKQEKDSKHFFNVTINAVSNLHQVCKDINDAVLEQQKKALWV 1329
            GD IL+Y   D+ N T+EE  +E+ K  +   L+VQY P  + KA+    DSFY+RA +DR    + ELSF+K DIL+V +T  +G  G W A  +++N      + K+ +G+IPSK   +QE   R S S   DD S         R+S FRR  K        H R  S D K  +        S     D  +  YQ V++++C   RPV+I+GP+ + + + LV      F RC  EV+ ++Q  +   V    ++DYK R G   ++V T  ++KE ++K  +HCLLDI   AIER+ + H+YPI+I++ +KS K IK+ RD  +++DK++ + +K+ ++   K E++   +F   I     L  +C  I   V ++Q K LW+
Sbjct: 1544 GDLILEYGSLDVRNKTVEEVYVEMLKPRDGVRLKVQYRPEEFTKAKGLPGDSFYIRALYDRLADVEQELSFKKDDILYVDDTLPQGTFGSWMAWQLDEN------AQKIQRGQIPSKYVMDQEFSRRLSMSEVKDDNSATKTLSAAARRSFFRRKHK--------HKRSGSKDGKDLLALDAFSSDSIPLFEDSVSLAYQRVQKVDCTALRPVLILGPLLDVVKEMLVNEAPGKFCRCPLEVMKASQQAIERGVKDCLFVDYKRRSG--HFDVTTVASIKEITEK-NRHCLLDIAPHAIERLHHMHIYPIVIFIHYKSAKHIKEQRDPIYLRDKVTQRHSKEQFEAAQKLEQEYSRYFTGVIQG-GALSSICTQILAMVNQEQNKVLWI 1914          
The following BLAST results are available for this feature:
BLAST of TCONS_00073683 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DLG51.640e-5934.70Disks large homolog 5 OS=Homo sapiens GN=DLG5 PE=1... [more]
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