TCONS_00073588 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073588
Unique NameTCONS_00073588
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1426

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073588 ID=TCONS_00073588|Name=TCONS_00073588|organism=Clytia hemisphaerica|type=transcript|length=1426bp
taaatttttatatattcaaaacaattttatatttGGCAAACCTTTGGGAC
ATCAAAAACCTATGGCATTAAAGCTATAAATTAGAAATACTCGATCATGT
CAAACACAAATACAGCTCCACTTGCGGTACAGTTCGACGTGTGGAATAAG
AAGATCTAAGTGTGCGAAAAAAGGGAGAAAGCATCAGCCTTCAAAGAGAA
ACATGACTGGTTTGTGGTTGTCAATCATTTGTATCTCGTATTTGTCGATT
GCCGTCCAAGCTGAAACAACTGATGCAAGAGCCGGGGGTGAAGATTTTTC
GATCGAATGTGATACCGAAAAGATGACGATTTATATTCTTAAAGACGAAA
TTTCAATTCCTGAAAGCGATATTTCCAAATACAACATCTCATGGAATGAT
CCTACTTGTGGACCAAGTGAACAATCAAATGAAACATATTTGGTTTTGGA
GGCTGGTTATTCGTCTTGTGGAACCAAAGCTGTTGTTGAAGGCGATCATG
TTATATTCAAGAATAAGGTATCCATCAACTTGAACAAAACAAACGCATAT
CAAAACGATTTATTGGAAAGGATTGACACCTTTGCCACATATTCCGTTGA
ATGCAACGTCCCACAAGGTGTGAATGTAACGCACGAACATGGAGCCAATA
TCACCAGAGATGCTGATTTGGTGGAAGGTGTATCAAGTTCGACTGATGAA
TTCACTGTCGCAATGAATCTCCATAAATCATCAAACTTCAATGAAAGTCT
TACATATCCTGCAGTTATTGATAGATTGGGACGTTTCAATTTGGAACTTG
AAATTGACACTGTTGCAAATTTGTATATCATTCCACGAGATTGTCATGGT
ACTTCTACTTCTGATCGAGATGACGTCATTCGGGAAGCTATTGTCATTGA
CGGATGTCCAAATGCTGACCACGTTTTCAAAGAAGAGTTTACCGCTGACA
ATGGAAAGAAATTCCGATTTTCATTGAACGTATTCCGATTCAAAAACTCG
AACGGTATGGTCTACATTCATTGCTCTGCACATGTCTGTTTGGAAGGAAG
TAATACCACAGAATGTCAATTCGGTTGTGATGTTAATAACAGAAGACGAA
GACGTTCAGTGGAGGAGAATGCTTTGACACTAAATGATGATCTTTCCAAA
GATTATGACATCCGAACTGGGTTGATTATCGTACccgaaaattctaaaaA
TGACGACTCATTCCAACAAGACACCCAAGAATCACCCAACAATACTCAAT
TCTTTCAAACCACGACCAATATCATTCTCATTGCAATCATCTTGGTAATG
TTGACTTTTGTATGTTCTCTCTTGGTTTTTGTTGGCTTACGTCGCCGTCG
AAGTGGTTCAAAAAGATATGGTGTCCCTGGATCTCCTTCGAAGATGGAAA
TGCATTAAATTGAAGTGACAGTACTA
Run BLAST on NCBI

protein sequence of TCONS_00073588-protein

>TCONS_00073588-protein ID=TCONS_00073588-protein|Name=TCONS_00073588-protein|organism=Clytia hemisphaerica|type=polypeptide|length=401bp
MTGLWLSIICISYLSIAVQAETTDARAGGEDFSIECDTEKMTIYILKDEI
SIPESDISKYNISWNDPTCGPSEQSNETYLVLEAGYSSCGTKAVVEGDHV
IFKNKVSINLNKTNAYQNDLLERIDTFATYSVECNVPQGVNVTHEHGANI
TRDADLVEGVSSSTDEFTVAMNLHKSSNFNESLTYPAVIDRLGRFNLELE
IDTVANLYIIPRDCHGTSTSDRDDVIREAIVIDGCPNADHVFKEEFTADN
GKKFRFSLNVFRFKNSNGMVYIHCSAHVCLEGSNTTECQFGCDVNNRRRR
RSVEENALTLNDDLSKDYDIRTGLIIVPENSKNDDSFQQDTQESPNNTQF
FQTTTNIILIAIILVMLTFVCSLLVFVGLRRRRSGSKRYGVPGSPSKMEM
H
Run BLAST on NCBI

transcript from alignment at scaffold_95:158797..163641+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073588 ID=TCONS_00073588|Name=TCONS_00073588|organism=Clytia hemisphaerica|type=transcript|length=4845bp|location=Sequence derived from alignment at scaffold_95:158797..163641+ (Clytia hemisphaerica)
taaatttttatatattcaaaacaattttatatttGGCAAACCTTTGGGAC ATCAAAAACCTATGGCATTAAAGCTATAAATTAGAAATACTCGATCATGT CAAACACAAATACAGCTCCACTTGCGGTACAGTTCGACGTGTGGAATAAG AAGATCTAAGTGTGCGAAAAAAGGGAGAAAGCATCAGCCTTCAAAGAGGT AAGTTCTTGCAAAAGTTTCTATTTTATGAAAATCGTTCTCTTTCACTTAA TACCAAGCATTTTGCATTTTATCAACCTAGCAAGCCTTAAAGCAATTTAG TAAGCTGTGAACGAGATAGGTGAAAATAACAATAccataacttggtctaa tgtcgacatccctcctctaatttcgacacccttttcatcagctgaaattg atagaaagattgaaactgtttttctttgcttagtggtcagagaggaataa tcctttttcaatcagtgattcaagctttgatattaaagaagggtgtcgga attagacgagggatgtcgatattaggcCAGCTTACGGTACAGGTTTATGA TGAACTCCGTAATAATTCATAGGGCTGAGACGGCAAAAGTATGATATTTT GTGCTTGTTTTTCAGAAACATGACTGGTTTGTGGTTGTCAATCATTTGTA TCTCGTATTTGTCGATTGCCGTCCAAGCTGAAACAACTGGTAATTATCTT GAatatatacacccctgtctcaaagcaCCGGTGGAACTTTGTTCCTCAGT GGTGATGAAAATTCCTGGGgatataaattctattgttccaaggatAAAAC ATCCAGTGGGGATGATTTTAGACTgcagtttttaaacattgattttcgga tggggatgaaatcaaagtaagCAATGACTTTAAGTTTGAAACTATCTATT TACAAAGCAAAGGTTACGATCTACAATCGGAAAATCCTCCAGACAAGAAA AAGTAATTTACATTTTCGACTGTTAGTTTATTgtacaaaagaagaaaaaa gcctTATTTAAATCGTTCACTGTTTTAGATGCAAGAGCCGGGGGTGAAGA TTTTTCGATCGAATGTGATACCGAAAAGATGACGATTTATATTCTTAAAG ACGAAATTTCAATTCCTGAAAGCGATATTTCCAAATACAACATCTCATGG AATGATCCTACTTGTGGACCAAGTGAACAATCAAATGAAACATATTTGGT TTTGGAGGCTGGTTATTCGTCTTGTGGAACCAAAGCTGTTGTTGAAGGCG ATCATGTTATATTCAAGAATAAGGTAAATTAAGTAAGATTGTTGATGTTT TTATTCGGCATTGGAAATAGTCGTGATTAGGGACACTCGATACAACTGAG AGCATGTTTCGAAGCTATGACACTAAAATTCTTTTTACAGTATAtagccc ccaaaacggaggctgcccccaaaacggagcttttcattaaaattaagatt ctgacttgtagatttatcagaattaaacgatttttgtatattttgaaaga atgatggttatacttaaaaatgagcatgtttttgctggtttgagacagat tcaaaataacatatttgcgtctaaaggaaatattttaacaccaaaatgag acaaaaattgcatataactcactctagctccttggatattgaaaataagt tatgaaaacggggtataggaaactttctacacctaatgccgttcagaaaa tgcaaatacatctgtgactttagaggctgggtaaaagatatagcatcttg aaggtcaaccagtattttggagccctagaatcagcattgacaaaaccgaa aattctaaatatgagaaaaagcaaaaagtcttggaattctattcctatca ccttgagttagtagtttataacaaaattaacattatatataaaaattttt gctgaatcggcaaaaacggcaaattctgtcatttttttgcaaaatatagg agaaaaatatctttaaagcttaatattttcagtttcagttaagctttttt tctaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaatttct aaattttcagtttggactttgcaatatcgaaaatcttaaaatatttcata aaagtcataaattttaaatccatcgggtcgtaaatttaagggaaaacaca aatatgttcaagTTTTCCACCCCTATTAcaactgggcttaataatttgat tttaactacacctccgttttgggggccccaaacctgcattttgacaacca ggggtatactgtgaagattttatcaaataaatttatgcccaaaaccctct aaatcatatttcaaaactatggtcaaaattttgtattcatatcttaaaga tatcttgaGAAATTTTTAAGCGATTGAAGAATATtgtttaaattgaaaat tttgaaaaagaacttccaggaaataaagtagagatgttaaaggtgttcat gcagcaaaattttttgtaaaatctcttttcctctagatttgagagaaatt tcaaatttgatcgccgttttgggggtcACATACTGTAGAGAaaattacac ccccttctcacaaacgtAGTAGGAATTTTTACCCATTGGAGTTAGAAATt acgtttctttataagaacatatataAGGACATTTATATAAGAGCATAGGg attcgatagccaaaatgttaagaacaagttaggaatatttttaggtttaa atctgaaaaacttaaaacgggcttcaaaaactttggatgttcttataaaa aaacgtgtaggaatTTATACTAATTCTATGCTTATAATAATGTGATAATT TTCTCCTCCAGGTATCCATCAACTTGAACAAAACAAACGCATATCAAAAC GATTTATTGGAAAGGATTGACACCTTTGCCACATATTCCGTTGAATGCAA CGTCCCACAAGGTGTGAATGTAACGCACGAACATGGAGCCAATATCACCA GAGATGCTGATTTGGTGGAAGGTGTATCAAGTAAGTAAAACTCGTAAGGA GATATCTGCCGATAAAAAAAGAAGCGTTTTAACCAGAGCTGtgcatcaac tttttttgaTAATCTTTTGAGTATTTTAATCGCATTAATTTTcacgagtt ttaatttcgcgttttcgcaaatattttcattttcgcgaaaataacaCTCG CAAAATCGCGTTAGATGGCAGACTCGTAAagttaaatccacgcgaaattt tcaaaatcagattttAAGCGTAAAATCAACTGTGAATACGCTACTTTCTA AGTTTAATTTTTTGGTTCAGAAACGTGGAAGTTTATCTAATTGAAGTAAA ATGCCTCTATATTGACAAATTCAGCATCAACTTGAGCTTAAAAATTATCA CTATCTTTCTAGGTTCGACTGATGAATTCACTGTCGCAATGAATCTCCAT AAATCATCAAACTTCAATGAAAGTCTTACATATCCTGCAGTTATTGATAG ATTGGGACGTTTCAATTTGGAACTTGAAATTGACACTGTTGCAAATTTGT ATATCATTCCACGAGATTGTCATGGTACTTCTACTTCTGATCGAGATGAC GTCATTCGGGAAGCTATTGTCATTGACGGGTAATTATGCAAATAATCTCA AGCTTTAAATTCTGCTCTATTGAATAATGCAGATTCCATATGATTTGACC ATGATTGATAAAAAATCACTCGCCGTATTGAACATTTCATCAAAACTTGT CATTTATACCCTATTAAGAGATAGGGAGATATGTAGTGAAAAATTAGGTA GCTAAATTTCAGCATATAGCTTAAATCTTTACCCGTAACATTAATACAAT CTTTTGCCATTTCTTGCTTTTATCCAAACAAACTTAACAATTTCAACTGT TTTAGATGTCCAAATGCTGACCACGTTTTCAAAGAAGAGTTTACCGCTGA CAATGGAAAGAAATTCCGATTTTCATTGAACGTATTCCGATTCAAAAACT CGAACGGTATGGTCTACATTCATTGCTCTGCACATGTCTGTTTGGAAGGA AGTAATACCACAGAATGTCAATTCGGTTGTGATGTTAATAACAGAAGACG AAGACGTTCAGTGGAGGAGAATGCTTTGACACTAAATGATGATCTTTCCA AAGATTATGACATCCGAACTGGGTTGATTATCGTACccgaaaattctaaa agtgagttgctaaatatttttcatataagTCAGATGTTTTAATAATGTTA AGTTGTCCAAGGCTTATCTTCTCTAAGAATTCCTATAAACTTCAGAAAAC AGATTGTATCTACTTAATATGATCGAATTGCGGGGACATCCTGGAAAATA TTACGGTACAAACATTGATAACACAATTTAATTCTAGGCTGAatctaaaa aaacattttaattaggaaactgaaaataaaagtgTCAGTTACCACATTTT TAACATTTATCTTTCTAGATGACGACTCATTCCAACAAGACACCCAAGAA TCACCCAACAATACTCAATTCTTTCAAACCACGACCAATATCATTCTCAT TGCAATCATCTTGGTAATGTTGACTTTTGTATGTTCTCTCTTGGTTTTTG TTGGCTTACGTCGCCGTCGAAGTGGTTCAAAAAGATATGGTGTCCCTGGA TCTCCTTCGAAGATGGAAATGCATTAAATTGAAGTGACAGTACTA

Coding sequence (CDS) from alignment at scaffold_95:158797..163641+

>TCONS_00073588 ID=TCONS_00073588|Name=TCONS_00073588|organism=Clytia hemisphaerica|type=CDS|length=7236bp|location=Sequence derived from alignment at scaffold_95:158797..163641+ (Clytia hemisphaerica)
ATGACTGGTTTGTGGTTGTCAATCATTTGTATCTCGTATTTGTCGATTGC
CGTCCAAGCTGAAACAACTGATGCAAGAGCCGGGGGTGAAGATTTTTCGA
TCGAATGTGATACCGAAAAGATGACGATTTATATTCTTAAAGACGAAATT
TCAATTCCTGAAAGCGATATTTCCAAATACAACATCTCATGGAATGATCC
TACTTGTGGACCAAGTGAACAATCAAATGAAACATATTTGGTTTTGGAGG
CTGGTTATTCGTCTTGTGGAACCAAAGCTGTTGTTGAAGGCGATCATGTT
ATATTCAAGAATAAGGTATCCATCAACTTGAACAAAACAAACGCATATCA
AAACGATTTATTGGAAAGGATTGACACCTTTGCCACATATTCCGTTGAAT
GCAACGTCCCACAAGGTGTGAATGTAACGCACGAACATGGAGCCAATATC
ACCAGAGATGCTGATTTGGTGGAAGGTGTATCAAGTTCGACTGATGAATT
CACTGTCGCAATGAATCTCCATAAATCATCAAACTTCAATGAAAGTCTTA
CATATCCTGCAGTTATTGATAGATTGGGACGTTTCAATTTGGAACTTGAA
ATTGACACTGTTGCAAATTTGTATATCATTCCACGAGATTGTCATGGTAC
TTCTACTTCTGATCGAGATGACGTCATTCGGGAAGCTATTGTCATTGACG
GATGTCCAAATGCTGACCACGTTTTCAAAGAAGAGTTTACCGCTGACAAT
GGAAAGAAATTCCGATTTTCATTGAACGTATTCCGATTCAAAAACTCGAA
CGGTATGGTCTACATTCATTGCTCTGCACATGTCTGTTTGGAAGGAAGTA
ATACCACAGAATGTCAATTCGGTTGTGATGTTAATAACAGAAGACGAAGA
CGTTCAGTGGAGGAGAATGCTTTGACACTAAATGATGATCTTTCCAAAGA
TTATGACATCCGAACTGGGTTGATTATCGTACccgaaaattctaaaaATG
ACGACTCATTCCAACAAGACACCCAAGAATCACCCAACAATACTCAATTC
TTTCAAACCACGACCAATATCATTCTCATTGCAATCATCTTGGTAATGTT
GACTTTTGTATGTTCTCTCTTGGTTTTTGTTGGCTTACGTCGCCGTCGAA
GTGGTTCAAAAAGATATGGTGTCCCTGGATCTCCTTCGAAGATGGAAATG
CATTAAATGACTGGTTTGTGGTTGTCAATCATTTGTATCTCGTATTTGTC
GATTGCCGTCCAAGCTGAAACAACTGATGCAAGAGCCGGGGGTGAAGATT
TTTCGATCGAATGTGATACCGAAAAGATGACGATTTATATTCTTAAAGAC
GAAATTTCAATTCCTGAAAGCGATATTTCCAAATACAACATCTCATGGAA
TGATCCTACTTGTGGACCAAGTGAACAATCAAATGAAACATATTTGGTTT
TGGAGGCTGGTTATTCGTCTTGTGGAACCAAAGCTGTTGTTGAAGGCGAT
CATGTTATATTCAAGAATAAGGTATCCATCAACTTGAACAAAACAAACGC
ATATCAAAACGATTTATTGGAAAGGATTGACACCTTTGCCACATATTCCG
TTGAATGCAACGTCCCACAAGGTGTGAATGTAACGCACGAACATGGAGCC
AATATCACCAGAGATGCTGATTTGGTGGAAGGTGTATCAAGTTCGACTGA
TGAATTCACTGTCGCAATGAATCTCCATAAATCATCAAACTTCAATGAAA
GTCTTACATATCCTGCAGTTATTGATAGATTGGGACGTTTCAATTTGGAA
CTTGAAATTGACACTGTTGCAAATTTGTATATCATTCCACGAGATTGTCA
TGGTACTTCTACTTCTGATCGAGATGACGTCATTCGGGAAGCTATTGTCA
TTGACGGATGTCCAAATGCTGACCACGTTTTCAAAGAAGAGTTTACCGCT
GACAATGGAAAGAAATTCCGATTTTCATTGAACGTATTCCGATTCAAAAA
CTCGAACGGTATGGTCTACATTCATTGCTCTGCACATGTCTGTTTGGAAG
GAAGTAATACCACAGAATGTCAATTCGGTTGTGATGTTAATAACAGAAGA
CGAAGACGTTCAGTGGAGGAGAATGCTTTGACACTAAATGATGATCTTTC
CAAAGATTATGACATCCGAACTGGGTTGATTATCGTACccgaaaattcta
aaaATGACGACTCATTCCAACAAGACACCCAAGAATCACCCAACAATACT
CAATTCTTTCAAACCACGACCAATATCATTCTCATTGCAATCATCTTGGT
AATGTTGACTTTTGTATGTTCTCTCTTGGTTTTTGTTGGCTTACGTCGCC
GTCGAAGTGGTTCAAAAAGATATGGTGTCCCTGGATCTCCTTCGAAGATG
GAAATGCATTAAATGACTGGTTTGTGGTTGTCAATCATTTGTATCTCGTA
TTTGTCGATTGCCGTCCAAGCTGAAACAACTGATGCAAGAGCCGGGGGTG
AAGATTTTTCGATCGAATGTGATACCGAAAAGATGACGATTTATATTCTT
AAAGACGAAATTTCAATTCCTGAAAGCGATATTTCCAAATACAACATCTC
ATGGAATGATCCTACTTGTGGACCAAGTGAACAATCAAATGAAACATATT
TGGTTTTGGAGGCTGGTTATTCGTCTTGTGGAACCAAAGCTGTTGTTGAA
GGCGATCATGTTATATTCAAGAATAAGGTATCCATCAACTTGAACAAAAC
AAACGCATATCAAAACGATTTATTGGAAAGGATTGACACCTTTGCCACAT
ATTCCGTTGAATGCAACGTCCCACAAGGTGTGAATGTAACGCACGAACAT
GGAGCCAATATCACCAGAGATGCTGATTTGGTGGAAGGTGTATCAAGTTC
GACTGATGAATTCACTGTCGCAATGAATCTCCATAAATCATCAAACTTCA
ATGAAAGTCTTACATATCCTGCAGTTATTGATAGATTGGGACGTTTCAAT
TTGGAACTTGAAATTGACACTGTTGCAAATTTGTATATCATTCCACGAGA
TTGTCATGGTACTTCTACTTCTGATCGAGATGACGTCATTCGGGAAGCTA
TTGTCATTGACGGATGTCCAAATGCTGACCACGTTTTCAAAGAAGAGTTT
ACCGCTGACAATGGAAAGAAATTCCGATTTTCATTGAACGTATTCCGATT
CAAAAACTCGAACGGTATGGTCTACATTCATTGCTCTGCACATGTCTGTT
TGGAAGGAAGTAATACCACAGAATGTCAATTCGGTTGTGATGTTAATAAC
AGAAGACGAAGACGTTCAGTGGAGGAGAATGCTTTGACACTAAATGATGA
TCTTTCCAAAGATTATGACATCCGAACTGGGTTGATTATCGTACccgaaa
attctaaaaATGACGACTCATTCCAACAAGACACCCAAGAATCACCCAAC
AATACTCAATTCTTTCAAACCACGACCAATATCATTCTCATTGCAATCAT
CTTGGTAATGTTGACTTTTGTATGTTCTCTCTTGGTTTTTGTTGGCTTAC
GTCGCCGTCGAAGTGGTTCAAAAAGATATGGTGTCCCTGGATCTCCTTCG
AAGATGGAAATGCATTAAATGACTGGTTTGTGGTTGTCAATCATTTGTAT
CTCGTATTTGTCGATTGCCGTCCAAGCTGAAACAACTGATGCAAGAGCCG
GGGGTGAAGATTTTTCGATCGAATGTGATACCGAAAAGATGACGATTTAT
ATTCTTAAAGACGAAATTTCAATTCCTGAAAGCGATATTTCCAAATACAA
CATCTCATGGAATGATCCTACTTGTGGACCAAGTGAACAATCAAATGAAA
CATATTTGGTTTTGGAGGCTGGTTATTCGTCTTGTGGAACCAAAGCTGTT
GTTGAAGGCGATCATGTTATATTCAAGAATAAGGTATCCATCAACTTGAA
CAAAACAAACGCATATCAAAACGATTTATTGGAAAGGATTGACACCTTTG
CCACATATTCCGTTGAATGCAACGTCCCACAAGGTGTGAATGTAACGCAC
GAACATGGAGCCAATATCACCAGAGATGCTGATTTGGTGGAAGGTGTATC
AAGTTCGACTGATGAATTCACTGTCGCAATGAATCTCCATAAATCATCAA
ACTTCAATGAAAGTCTTACATATCCTGCAGTTATTGATAGATTGGGACGT
TTCAATTTGGAACTTGAAATTGACACTGTTGCAAATTTGTATATCATTCC
ACGAGATTGTCATGGTACTTCTACTTCTGATCGAGATGACGTCATTCGGG
AAGCTATTGTCATTGACGGATGTCCAAATGCTGACCACGTTTTCAAAGAA
GAGTTTACCGCTGACAATGGAAAGAAATTCCGATTTTCATTGAACGTATT
CCGATTCAAAAACTCGAACGGTATGGTCTACATTCATTGCTCTGCACATG
TCTGTTTGGAAGGAAGTAATACCACAGAATGTCAATTCGGTTGTGATGTT
AATAACAGAAGACGAAGACGTTCAGTGGAGGAGAATGCTTTGACACTAAA
TGATGATCTTTCCAAAGATTATGACATCCGAACTGGGTTGATTATCGTAC
ccgaaaattctaaaaATGACGACTCATTCCAACAAGACACCCAAGAATCA
CCCAACAATACTCAATTCTTTCAAACCACGACCAATATCATTCTCATTGC
AATCATCTTGGTAATGTTGACTTTTGTATGTTCTCTCTTGGTTTTTGTTG
GCTTACGTCGCCGTCGAAGTGGTTCAAAAAGATATGGTGTCCCTGGATCT
CCTTCGAAGATGGAAATGCATTAAATGACTGGTTTGTGGTTGTCAATCAT
TTGTATCTCGTATTTGTCGATTGCCGTCCAAGCTGAAACAACTGATGCAA
GAGCCGGGGGTGAAGATTTTTCGATCGAATGTGATACCGAAAAGATGACG
ATTTATATTCTTAAAGACGAAATTTCAATTCCTGAAAGCGATATTTCCAA
ATACAACATCTCATGGAATGATCCTACTTGTGGACCAAGTGAACAATCAA
ATGAAACATATTTGGTTTTGGAGGCTGGTTATTCGTCTTGTGGAACCAAA
GCTGTTGTTGAAGGCGATCATGTTATATTCAAGAATAAGGTATCCATCAA
CTTGAACAAAACAAACGCATATCAAAACGATTTATTGGAAAGGATTGACA
CCTTTGCCACATATTCCGTTGAATGCAACGTCCCACAAGGTGTGAATGTA
ACGCACGAACATGGAGCCAATATCACCAGAGATGCTGATTTGGTGGAAGG
TGTATCAAGTTCGACTGATGAATTCACTGTCGCAATGAATCTCCATAAAT
CATCAAACTTCAATGAAAGTCTTACATATCCTGCAGTTATTGATAGATTG
GGACGTTTCAATTTGGAACTTGAAATTGACACTGTTGCAAATTTGTATAT
CATTCCACGAGATTGTCATGGTACTTCTACTTCTGATCGAGATGACGTCA
TTCGGGAAGCTATTGTCATTGACGGATGTCCAAATGCTGACCACGTTTTC
AAAGAAGAGTTTACCGCTGACAATGGAAAGAAATTCCGATTTTCATTGAA
CGTATTCCGATTCAAAAACTCGAACGGTATGGTCTACATTCATTGCTCTG
CACATGTCTGTTTGGAAGGAAGTAATACCACAGAATGTCAATTCGGTTGT
GATGTTAATAACAGAAGACGAAGACGTTCAGTGGAGGAGAATGCTTTGAC
ACTAAATGATGATCTTTCCAAAGATTATGACATCCGAACTGGGTTGATTA
TCGTACccgaaaattctaaaaATGACGACTCATTCCAACAAGACACCCAA
GAATCACCCAACAATACTCAATTCTTTCAAACCACGACCAATATCATTCT
CATTGCAATCATCTTGGTAATGTTGACTTTTGTATGTTCTCTCTTGGTTT
TTGTTGGCTTACGTCGCCGTCGAAGTGGTTCAAAAAGATATGGTGTCCCT
GGATCTCCTTCGAAGATGGAAATGCATTAAATGACTGGTTTGTGGTTGTC
AATCATTTGTATCTCGTATTTGTCGATTGCCGTCCAAGCTGAAACAACTG
ATGCAAGAGCCGGGGGTGAAGATTTTTCGATCGAATGTGATACCGAAAAG
ATGACGATTTATATTCTTAAAGACGAAATTTCAATTCCTGAAAGCGATAT
TTCCAAATACAACATCTCATGGAATGATCCTACTTGTGGACCAAGTGAAC
AATCAAATGAAACATATTTGGTTTTGGAGGCTGGTTATTCGTCTTGTGGA
ACCAAAGCTGTTGTTGAAGGCGATCATGTTATATTCAAGAATAAGGTATC
CATCAACTTGAACAAAACAAACGCATATCAAAACGATTTATTGGAAAGGA
TTGACACCTTTGCCACATATTCCGTTGAATGCAACGTCCCACAAGGTGTG
AATGTAACGCACGAACATGGAGCCAATATCACCAGAGATGCTGATTTGGT
GGAAGGTGTATCAAGTTCGACTGATGAATTCACTGTCGCAATGAATCTCC
ATAAATCATCAAACTTCAATGAAAGTCTTACATATCCTGCAGTTATTGAT
AGATTGGGACGTTTCAATTTGGAACTTGAAATTGACACTGTTGCAAATTT
GTATATCATTCCACGAGATTGTCATGGTACTTCTACTTCTGATCGAGATG
ACGTCATTCGGGAAGCTATTGTCATTGACGGATGTCCAAATGCTGACCAC
GTTTTCAAAGAAGAGTTTACCGCTGACAATGGAAAGAAATTCCGATTTTC
ATTGAACGTATTCCGATTCAAAAACTCGAACGGTATGGTCTACATTCATT
GCTCTGCACATGTCTGTTTGGAAGGAAGTAATACCACAGAATGTCAATTC
GGTTGTGATGTTAATAACAGAAGACGAAGACGTTCAGTGGAGGAGAATGC
TTTGACACTAAATGATGATCTTTCCAAAGATTATGACATCCGAACTGGGT
TGATTATCGTACccgaaaattctaaaaATGACGACTCATTCCAACAAGAC
ACCCAAGAATCACCCAACAATACTCAATTCTTTCAAACCACGACCAATAT
CATTCTCATTGCAATCATCTTGGTAATGTTGACTTTTGTATGTTCTCTCT
TGGTTTTTGTTGGCTTACGTCGCCGTCGAAGTGGTTCAAAAAGATATGGT
GTCCCTGGATCTCCTTCGAAGATGGAAATGCATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045690XLOC_045690Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073588-proteinTCONS_00073588-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073588-exon-scaffold_95-1491911889:158797..158994TCONS_00073588-exon-scaffold_95-1491911889:158797..158994Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1510915933:158797..158994TCONS_00073588-exon-scaffold_95-1510915933:158797..158994Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1575043694:158797..158994TCONS_00073588-exon-scaffold_95-1575043694:158797..158994Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1491911889:159412..159485TCONS_00073588-exon-scaffold_95-1491911889:159412..159485Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1510915933:159412..159485TCONS_00073588-exon-scaffold_95-1510915933:159412..159485Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1575043694:159412..159485TCONS_00073588-exon-scaffold_95-1575043694:159412..159485Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1491911889:159825..160069TCONS_00073588-exon-scaffold_95-1491911889:159825..160069Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1510915933:159825..160069TCONS_00073588-exon-scaffold_95-1510915933:159825..160069Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1575043694:159825..160069TCONS_00073588-exon-scaffold_95-1575043694:159825..160069Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1491911889:161808..161976TCONS_00073588-exon-scaffold_95-1491911889:161808..161976Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1510915933:161808..161976TCONS_00073588-exon-scaffold_95-1510915933:161808..161976Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1575043694:161808..161976TCONS_00073588-exon-scaffold_95-1575043694:161808..161976Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1491911889:162359..162575TCONS_00073588-exon-scaffold_95-1491911889:162359..162575Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1510915933:162359..162575TCONS_00073588-exon-scaffold_95-1510915933:162359..162575Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1575043694:162359..162575TCONS_00073588-exon-scaffold_95-1575043694:162359..162575Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1491911889:162852..163147TCONS_00073588-exon-scaffold_95-1491911889:162852..163147Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1510915933:162852..163147TCONS_00073588-exon-scaffold_95-1510915933:162852..163147Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1575043694:162852..163147TCONS_00073588-exon-scaffold_95-1575043694:162852..163147Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1491911889:163415..163641TCONS_00073588-exon-scaffold_95-1491911889:163415..163641Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1510915933:163415..163641TCONS_00073588-exon-scaffold_95-1510915933:163415..163641Clytia hemisphaericaexon
TCONS_00073588-exon-scaffold_95-1575043694:163415..163641TCONS_00073588-exon-scaffold_95-1575043694:163415..163641Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_95supercontigscaffold_95:158797..163641 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
592.938 577.798 558.207 554.543 1.05409 0.728659 0.182629 0.245509 0.186031 1.31616 0.132203 0.410258 0 0 0 0.0233143 0 0 0 0.0331802 0.691358 0.430321 118.139 95.4133 0.279686 0.128915 2.94348 3.49392 53.3195 64.8865
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001507ZP_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073588 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top