XLOC_045690 (gene) - C. hemisphaerica

Overview
NameXLOC_045690
Unique NameXLOC_045690
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_95:158797..163641+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045690 ID=XLOC_045690|Name=XLOC_045690|organism=Clytia hemisphaerica|type=gene|length=4845bp|location=Sequence derived from alignment at scaffold_95:158797..163641+ (Clytia hemisphaerica)
taaatttttatatattcaaaacaattttatatttGGCAAACCTTTGGGAC
ATCAAAAACCTATGGCATTAAAGCTATAAATTAGAAATACTCGATCATGT
CAAACACAAATACAGCTCCACTTGCGGTACAGTTCGACGTGTGGAATAAG
AAGATCTAAGTGTGCGAAAAAAGGGAGAAAGCATCAGCCTTCAAAGAGGT
AAGTTCTTGCAAAAGTTTCTATTTTATGAAAATCGTTCTCTTTCACTTAA
TACCAAGCATTTTGCATTTTATCAACCTAGCAAGCCTTAAAGCAATTTAG
TAAGCTGTGAACGAGATAGGTGAAAATAACAATAccataacttggtctaa
tgtcgacatccctcctctaatttcgacacccttttcatcagctgaaattg
atagaaagattgaaactgtttttctttgcttagtggtcagagaggaataa
tcctttttcaatcagtgattcaagctttgatattaaagaagggtgtcgga
attagacgagggatgtcgatattaggcCAGCTTACGGTACAGGTTTATGA
TGAACTCCGTAATAATTCATAGGGCTGAGACGGCAAAAGTATGATATTTT
GTGCTTGTTTTTCAGAAACATGACTGGTTTGTGGTTGTCAATCATTTGTA
TCTCGTATTTGTCGATTGCCGTCCAAGCTGAAACAACTGGTAATTATCTT
GAatatatacacccctgtctcaaagcaCCGGTGGAACTTTGTTCCTCAGT
GGTGATGAAAATTCCTGGGgatataaattctattgttccaaggatAAAAC
ATCCAGTGGGGATGATTTTAGACTgcagtttttaaacattgattttcgga
tggggatgaaatcaaagtaagCAATGACTTTAAGTTTGAAACTATCTATT
TACAAAGCAAAGGTTACGATCTACAATCGGAAAATCCTCCAGACAAGAAA
AAGTAATTTACATTTTCGACTGTTAGTTTATTgtacaaaagaagaaaaaa
gcctTATTTAAATCGTTCACTGTTTTAGATGCAAGAGCCGGGGGTGAAGA
TTTTTCGATCGAATGTGATACCGAAAAGATGACGATTTATATTCTTAAAG
ACGAAATTTCAATTCCTGAAAGCGATATTTCCAAATACAACATCTCATGG
AATGATCCTACTTGTGGACCAAGTGAACAATCAAATGAAACATATTTGGT
TTTGGAGGCTGGTTATTCGTCTTGTGGAACCAAAGCTGTTGTTGAAGGCG
ATCATGTTATATTCAAGAATAAGGTAAATTAAGTAAGATTGTTGATGTTT
TTATTCGGCATTGGAAATAGTCGTGATTAGGGACACTCGATACAACTGAG
AGCATGTTTCGAAGCTATGACACTAAAATTCTTTTTACAGTATAtagccc
ccaaaacggaggctgcccccaaaacggagcttttcattaaaattaagatt
ctgacttgtagatttatcagaattaaacgatttttgtatattttgaaaga
atgatggttatacttaaaaatgagcatgtttttgctggtttgagacagat
tcaaaataacatatttgcgtctaaaggaaatattttaacaccaaaatgag
acaaaaattgcatataactcactctagctccttggatattgaaaataagt
tatgaaaacggggtataggaaactttctacacctaatgccgttcagaaaa
tgcaaatacatctgtgactttagaggctgggtaaaagatatagcatcttg
aaggtcaaccagtattttggagccctagaatcagcattgacaaaaccgaa
aattctaaatatgagaaaaagcaaaaagtcttggaattctattcctatca
ccttgagttagtagtttataacaaaattaacattatatataaaaattttt
gctgaatcggcaaaaacggcaaattctgtcatttttttgcaaaatatagg
agaaaaatatctttaaagcttaatattttcagtttcagttaagctttttt
tctaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaatttct
aaattttcagtttggactttgcaatatcgaaaatcttaaaatatttcata
aaagtcataaattttaaatccatcgggtcgtaaatttaagggaaaacaca
aatatgttcaagTTTTCCACCCCTATTAcaactgggcttaataatttgat
tttaactacacctccgttttgggggccccaaacctgcattttgacaacca
ggggtatactgtgaagattttatcaaataaatttatgcccaaaaccctct
aaatcatatttcaaaactatggtcaaaattttgtattcatatcttaaaga
tatcttgaGAAATTTTTAAGCGATTGAAGAATATtgtttaaattgaaaat
tttgaaaaagaacttccaggaaataaagtagagatgttaaaggtgttcat
gcagcaaaattttttgtaaaatctcttttcctctagatttgagagaaatt
tcaaatttgatcgccgttttgggggtcACATACTGTAGAGAaaattacac
ccccttctcacaaacgtAGTAGGAATTTTTACCCATTGGAGTTAGAAATt
acgtttctttataagaacatatataAGGACATTTATATAAGAGCATAGGg
attcgatagccaaaatgttaagaacaagttaggaatatttttaggtttaa
atctgaaaaacttaaaacgggcttcaaaaactttggatgttcttataaaa
aaacgtgtaggaatTTATACTAATTCTATGCTTATAATAATGTGATAATT
TTCTCCTCCAGGTATCCATCAACTTGAACAAAACAAACGCATATCAAAAC
GATTTATTGGAAAGGATTGACACCTTTGCCACATATTCCGTTGAATGCAA
CGTCCCACAAGGTGTGAATGTAACGCACGAACATGGAGCCAATATCACCA
GAGATGCTGATTTGGTGGAAGGTGTATCAAGTAAGTAAAACTCGTAAGGA
GATATCTGCCGATAAAAAAAGAAGCGTTTTAACCAGAGCTGtgcatcaac
tttttttgaTAATCTTTTGAGTATTTTAATCGCATTAATTTTcacgagtt
ttaatttcgcgttttcgcaaatattttcattttcgcgaaaataacaCTCG
CAAAATCGCGTTAGATGGCAGACTCGTAAagttaaatccacgcgaaattt
tcaaaatcagattttAAGCGTAAAATCAACTGTGAATACGCTACTTTCTA
AGTTTAATTTTTTGGTTCAGAAACGTGGAAGTTTATCTAATTGAAGTAAA
ATGCCTCTATATTGACAAATTCAGCATCAACTTGAGCTTAAAAATTATCA
CTATCTTTCTAGGTTCGACTGATGAATTCACTGTCGCAATGAATCTCCAT
AAATCATCAAACTTCAATGAAAGTCTTACATATCCTGCAGTTATTGATAG
ATTGGGACGTTTCAATTTGGAACTTGAAATTGACACTGTTGCAAATTTGT
ATATCATTCCACGAGATTGTCATGGTACTTCTACTTCTGATCGAGATGAC
GTCATTCGGGAAGCTATTGTCATTGACGGGTAATTATGCAAATAATCTCA
AGCTTTAAATTCTGCTCTATTGAATAATGCAGATTCCATATGATTTGACC
ATGATTGATAAAAAATCACTCGCCGTATTGAACATTTCATCAAAACTTGT
CATTTATACCCTATTAAGAGATAGGGAGATATGTAGTGAAAAATTAGGTA
GCTAAATTTCAGCATATAGCTTAAATCTTTACCCGTAACATTAATACAAT
CTTTTGCCATTTCTTGCTTTTATCCAAACAAACTTAACAATTTCAACTGT
TTTAGATGTCCAAATGCTGACCACGTTTTCAAAGAAGAGTTTACCGCTGA
CAATGGAAAGAAATTCCGATTTTCATTGAACGTATTCCGATTCAAAAACT
CGAACGGTATGGTCTACATTCATTGCTCTGCACATGTCTGTTTGGAAGGA
AGTAATACCACAGAATGTCAATTCGGTTGTGATGTTAATAACAGAAGACG
AAGACGTTCAGTGGAGGAGAATGCTTTGACACTAAATGATGATCTTTCCA
AAGATTATGACATCCGAACTGGGTTGATTATCGTACccgaaaattctaaa
agtgagttgctaaatatttttcatataagTCAGATGTTTTAATAATGTTA
AGTTGTCCAAGGCTTATCTTCTCTAAGAATTCCTATAAACTTCAGAAAAC
AGATTGTATCTACTTAATATGATCGAATTGCGGGGACATCCTGGAAAATA
TTACGGTACAAACATTGATAACACAATTTAATTCTAGGCTGAatctaaaa
aaacattttaattaggaaactgaaaataaaagtgTCAGTTACCACATTTT
TAACATTTATCTTTCTAGATGACGACTCATTCCAACAAGACACCCAAGAA
TCACCCAACAATACTCAATTCTTTCAAACCACGACCAATATCATTCTCAT
TGCAATCATCTTGGTAATGTTGACTTTTGTATGTTCTCTCTTGGTTTTTG
TTGGCTTACGTCGCCGTCGAAGTGGTTCAAAAAGATATGGTGTCCCTGGA
TCTCCTTCGAAGATGGAAATGCATTAAATTGAAGTGACAGTACTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073588TCONS_00073588Clytia hemisphaericatranscript
TCONS_00073589TCONS_00073589Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073588-proteinTCONS_00073588-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_95supercontigscaffold_95:158797..163641 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1221.39	1281.78	1212.37	1187.98	1.06	1.08	0.18	0.74	0.24	2	0.13	0.41	0	0	0	0.02	0.12	0	0	0.03	2.78	2.66	270.82	229.72	0.28	0.13	10.15	12.69	129.91	156.03