TCONS_00073557 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073557
Unique NameTCONS_00073557
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length147

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073557 ID=TCONS_00073557|Name=TCONS_00073557|organism=Clytia hemisphaerica|type=transcript|length=147bp
CTTGATCATTCCAAGTCTGTCGGTGGACTGATACCTGTTAAATTGCTAAA
ACTTGGAGTTGAACGTTGTTCTCCAATTCTAGCCACTCTTTTTAATTCAG
CAATTAATACTGGGGTCTTTCCCCATGACCTTAAGCTTGCAGATATC
Run BLAST on NCBI

transcript from alignment at scaffold_94:46998..47144

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073557 ID=TCONS_00073557|Name=TCONS_00073557|organism=Clytia hemisphaerica|type=transcript|length=147bp|location=Sequence derived from alignment at scaffold_94:46998..47144 (Clytia hemisphaerica)
GATATCTGCAAGCTTAAGGTCATGGGGAAAGACCCCAGTATTAATTGCTG
AATTAAAAAGAGTGGCTAGAATTGGAGAACAACGTTCAACTCCAAGTTTT
AGCAATTTAACAGGTATCAGTCCACCGACAGACTTGGAATGATCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045659XLOC_045659Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073557-exon-scaffold_94-1491911889:46998..47144TCONS_00073557-exon-scaffold_94-1491911889:46998..47144Clytia hemisphaericaexon
TCONS_00073557-exon-scaffold_94-1510915933:46998..47144TCONS_00073557-exon-scaffold_94-1510915933:46998..47144Clytia hemisphaericaexon
TCONS_00073557-exon-scaffold_94-1575043694:46998..47144TCONS_00073557-exon-scaffold_94-1575043694:46998..47144Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_94supercontigscaffold_94:46998..47144 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073557 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top