TCONS_00073468 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073468
Unique NameTCONS_00073468
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2644

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073468 ID=TCONS_00073468|Name=TCONS_00073468|organism=Clytia hemisphaerica|type=transcript|length=2644bp
TGAAGGAGGTCAATCATTTTACCATTATTTTGCACCACCTCTTCCAAAGA
ATGTTATCATGTTTGCAACAAACAACAATTCAATCCAAGAACAGTTTGAA
GTGAGAGTTAGTATTGATCCCAGTGTAGAGGATAAGAAAATCGGCGAATT
CTCAAGAGATAAAGATTGTTTTGTATGGAAAGTTGACTTGACAGAGGAAG
AAGTGGATGCAacaaataaagttttaaaaatggATCGATTACTTAAAATT
AGTGTGACCAAACAAGGAGCTGATGAAGGATTCTCTTCTCAAGACAAAGA
TGAAGAAGATTTAGTTTTTGATAACGACAATGATGATATcacagaatttg
aaaaaagtttagaaaaattTGAAGACGACTTCAAGGAAAACCAATCAGCC
ATCAAAACACTTCATAAAAAGGTTGCTTCTCTACCAACCAAATCATCAAC
TAAAAAGAAAGTATCCGATTTCTTCAAACCtaaacaacagaaaaaaaatt
ctgatttcaaagctaaaacaataaCCAGTAAAGAAACTGTTCTGACAGAA
ACTAAAGATAAAGTCAATGACTCTGATGGTGATAAAGAACAAAAGGGAAA
AAGACCACACCCATTTGTCGACTCCCCTGAATCTAAACCAAAGAAAGCAA
TGATGCAAGCCAAACCTTCCAAAACACCAGAGATGGCTAAGAGAAGAGTC
ATAAGGAAATCTGGGAAGTCACCAGCAGCTAAATTTTCTGATCTCATTTC
TCATGAAAATCCTACAGGACGGTGGGGTCATGGATGCTGCAAGATTTGTC
ATGATAAAGCAATAGTCATTGGTGGTCAAACCAAACAACAGATGAATACT
GATTCTATGTGGCTTCTTGACTTGAAAACCCGAAAATGGGAGTTACAAAA
GTCCGATAATTCTACAATTGATCGTCGTGTCGGACATAGTGTCGTATATG
ACGAAAAAAGAAACCTCGTTTTTGTTTATGGTGGATCAAAACCGAAGAAA
TGGTATAGTGATGTTTATTCACTGAATCTTGCCACTTTCGAATGGGAAAA
ATCAGAGACCATTGGTAAAGCCCCAACAAGAGCTTATCACTCATGCAACA
AATTTCACGACGAACTTTTTGTATTTGGGGGTGTTTACCCAAACCCTGAC
CCTGACCCTGATGGTTGCAGCAATGAACTCGTCATTTATGATATTGCAAA
TAAAAGTTGGTACACACCTATCATTAGCGGTGATATTCCGAATCCTCGAT
CGGAGTAAGTTCCTCACTCTAGATTTGACAGCATCTCGTCGATCTTTTAA
TAACACTCCTGTACTGTCATTCAGCAGTGATGATTGGTTCCAAATTGTAC
ATTTTCGGTGGCTGGGATGCGCCGACCTGTCATGATGATATCTATTGTCT
CGATATAGTCATAATGAAGTATACGAGATTGAAACCTATTGGTGAAGGTC
CGTCTGCCCGTACTTGGCATTCCACCTCTGTTCTATCAAATCCAAATCAA
TTTTGTATTTATGGTGGCTTCGATGGCAACGACAGTTTGAATGATCTTTT
TGTTTTCGATTCAGTCAAAACGTGTTGGAGCAAGATACATAACGAGCATA
ATTCCATTTTACGTGCTGGTCATACATCACTGTTGATGACGTCACCATAT
AgtgatgatgacgtcacaaaagcCAACAACAAAAGTCAGGTGTTAATTTT
CGGAGGCGGTGATAACGCCGGACAATTTTATAACGATGTCATTCTACTGG
ATGTGAAATAGCAAAAGTGTCGTTTACTATATTTCgtgttttttaatatt
ttttttttggtatttttatttaGTATGATTCTTATGTTTATCTCTTTTAG
GCGAGATTAGGTAAAGAATATTATCATTTAAGATTCTCCATATTTGTGGT
AGTGTATATAgaattaaagggacataaaagtactgacgaaattagtaaac
aaaccatatgtggcgggatacaaaatcaaaacaaatgtcacatgtcaaaa
tcaaaaatcaaaaNNNNNNNNNNNNNNNNNNNaaaatcaaaacaaatgtc
acatgtcaaaatcaaaaatcaaaacaaatatggctgattttgattgtttc
aattgttttacaagtttgttttggacacgtgattttaattgttttcttta
atgacacgtggtttgtgcaatgtttacattttactacttttatgtccctt
taagcagGCAGCAATTATGTGTGATTTCAGGAGTTCTATATGTGCTTTAA
CCTCCTTTCAGAGAGATGAGTTAAATAccgaaattcatgatattcatgac
gtaatgttttctacggaaagaccccggtttttgccagtagtggcactttt
ttacaccttttgtctagtttataagtgccactactggctaaaaccgaggt
atttccgtagaaaacattacgtcatgactATCAAGAAATTAATTCGTAAA
TGCATGCTCCTCCCATGCTCCTCTGATCTTACGCGAATTGTATTCACGAA
TTTTGAATTGAATGAACATTACttgcaaatttcttttcatatttTAATAT
ATATTAAAACTTTAAATCCGAATGTGGTTTTAGAATGATCCAAAATTACT
TATACTTTGTATGACGTCCTGTTGTTATCTATTCATTATTTAAT
Run BLAST on NCBI

transcript from alignment at scaffold_92:259747..269889-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073468 ID=TCONS_00073468|Name=TCONS_00073468|organism=Clytia hemisphaerica|type=transcript|length=10143bp|location=Sequence derived from alignment at scaffold_92:259747..269889- (Clytia hemisphaerica)
TGAAGGAGGTCAATCATTTTACCATTATTTTGCACCACCTCTTCCAAAGA
ATGTTATCATGTTTGCAACAAACAACAATTCAATCCAAGAACAGTTTGAA
GTGAGAGTTAGTATTGATCCCAGTGTAGAGGATAAGAAAATCGGCGAATT
CTCAAGAGATAAAGATTGTTTTGTATGGAAAGTTGACTTGACAGAGGAAG
AAGTGGATGCAACAAATAAAGTTTTAAAAATGGTATGGAAGGGTTTTTGT
TCAAAGAAAGTCTTATAATTACTCCCTCAAGCAGCTTTAGAAGTTTTATA
AACAAAAAAGGAACCTTGTACATTCACACAAAATTTTTACATACTGCTTT
TTGTTAACCTGTTTTTGTTGGACTGTAATAAGGGTTTTCAGAAAACCTGA
ACAAGGATCTATATTTCCTCCCATCTTAGCTTACAAAGTATAGTTACAAT
AAAAAGTTTGCAATTTCTTCCTTTGATAACTTATTAACAATTTATTTTTT
CTTAGGATCGATTACTTAAAATTAGTGTGACCAAACAAGGAGCTGATGAA
GGATTCTCTTCTCAAGACAAAGATGAAGAAGATTTAGTTTTTGATAACGA
CAATGATGATATCACAGAATTTGAAAAAAGTTTAGAAAAATTTGAAGACG
ACTTCAAGGAAAACCAATCAGCCATCAAAACACTTCATAAAAAGGTTGCT
TCTCTACCAACCAAATCATCAACTAAAAAGAAAGTATCCGATTTCTTCAA
ACCTAAACAACAGAAAAAAAATTCTGATTTCAAAGCTAAAACAATAACCA
GTAAAGAAACTGTTCTGACAGAAACTAAAGATAAAGTCAATGACTCTGAT
GGTGATAAAGAACAAAAGGGAAAAAGACCACACCCATTTGTCGAGTTAGT
ACACTCTATATTCTTTTATGTTTCCATTAGACAACAGTCAGTTGACTTGG
GTATCAATGAACTGAGAAGAGAGTAGAGAACTCAATATTATCCAAAAGTT
ACTTTAGGCATACAAACTTTCGCGGGCAGAAACTTTCGCGATGTCGAAAA
ATCGCGAAATGTTATTCGCGAGCATAAACTTTCGCAAATCGTTAGATAAA
AATGAGAATTTTCGAATAAAAATTGCCTTAAATTGAAAAATATTCATTAA
ATCCACTAAAGACGATTGCTCTTCGATTTTAAAATGGCATTAAAGGATAA
TAATATGCCTAAAATTTGATTTCTATTACGATTTCGAGGTTTTTTGATTT
TAAATTTTTTAAGAATATTTCGTGAGCATAAACTTTCGCGAATTGCCCTG
TTAATAATTTTCAAAGACATTTACTTTCGCGAAAAAGGCCAAAGTTCGCG
AAATTCGCGAAAGTTTCTGCTTGCGAAACTTTTTACGCCTAAAGTAATGG
CGATCTTGACACTTGTCAACATCCATGAATTATACGTTGTTAATCACGCC
TTAATTCATTCAGCTAAGTTTTTGTCTCGACAGCTCAAATTTAAAAAGTG
TAATTATTTCACTAAAGACTGGTCTTAATGATGATTTGTTCTAGCTCCCC
TGAATCTAAACCAAAGAAAGCAATGATGCAAGCCAAACCTTCCAAAACAC
CAGAGATGGCTAAGAGAAGAGTCATAAGGAAATCTGGGAAGTCACCAGCA
GCTAAATTTTCTGATCTCATTTCTCATGAAAGTAAGCATTTGAGAAATTG
CAATTATTGTTTTTGTTAACTGGTTGTTGTTTTTTTTATGCGGTCTGTAC
GAGATTTTTTTAAGCAATGGAATTGGATCTTTTCGCACGAGGACAGGCTT
ACACAGCCTGTCTGACAAAAAATCGACAGGAAAATGACACTTTCAAATTT
CTGCTTGATTGATTTAAAGAAGTTATTACATGTGCGTCAAAAGAAGGTAA
ATTGCATTGTCTTTAAATTGTCGACTTTCTGTCGTCTTTTGTCTAAAATA
AGGGAAGACTAAAAAATGCTTTCAAAACTTTGTATTCAACCTTACAGATC
CTACAGGACGGTGGGGTCATGGATGCTGCAAGATTTGTCATGATAAAGCA
ATAGTCATTGGTGGTCAAACCAAACAACAGATGAATACTGATTCTATGTG
GCTTCTTGACTTGAGTAAGTAGCATGAAGCAATAATTCAAAATATTGTTG
TGGATCAATAGATTATTGTATTTTTTTGCTTGCCTTGATTCATCCCTGAG
GTGATTTATTACCATGACAATTTCGTTTCCTCTTCTAAATTCCCTCGATT
AGATAAGGCTGTAACAATAACAAAGGTGCTTGAATTTGACTGAAAAAAGC
AATTATAAAAAATTAAAAGTTCTTTTGGGGTTTTAATTATTTAAGTCAGG
AGATAATATTATAAAGAAGTGGTATTTTATATTCATTATAGCCTTGTTTT
TCACCGATAGACACATCAAAATCTCTAAAAATCGAGTAGTCTTCTATTTA
AAACCTTTTCAGAAACCCGAAAATGGGAGTTACAAAAGTCCGATAATTCT
ACAATTGATCGTCGTGTCGGACATAGTGTCGTATATGACGAAAAAAGAAA
CCTCGTTTTTGTTTATGGTGGATCAAAACCGAAGAAATGGTATAGTGATG
TTTATTCACTGAATCTTGCCACTTTCGAATGGGAAAAATCAGAGGTATAT
CTCTTTTTGATTCGAATCTATTATCAGCTCTTAAAAGCAGAACAAATTAA
GTATTGAATGGAGAGCTTCAGCTTAGGAGCTGTTTTAAAAATGGAGGCAA
GCTGGCCCAGGTGAGATGGGATGGATAGCTAAAAAAATCATATTGTATCA
TATTTCAATTTGATTTAGCATAAAGACATAATCCTGAAAATTTGAAGTCA
TTTTGTTAAAAATAAATCAAAGGATATTTCACTTTCATTTTCGGTCAGAG
TGTGCAAACAGTACTTTTAAAAATCGTTTTGTGTGAAAACAAAATAGTTT
TTTATTTGAAATTTTCACAGGTTTGCTTACGCACATTTCTACGTCACAAA
TATCAATTTCGTAATTTTTCTAGAGATTTAATGTAGGTACTATTATATTT
CTAGACCATTGGTAAAGCCCCAACAAGAGCTTATCACTCATGCAACAAAT
TTCACGACGAACTTTTTGTATTTGGGGGTGTTTACCCAAACCCTGACCCT
GACCCTGATGGTTGCAGCAATGAACTCGTCATTTATGATATTGGTATGTT
TTTATATTTCATTAATACAAATTCATCATGTTTTCTGTTGTCATTCCCAA
GGAAAATAAAAGATAAAAGAGGCTCTTCTATTGAGCCAAGGGCGGGTATT
TTAAGGTATCCTCAGAACATTTATATCGTGTACATCCTTAAAGTTTTTCG
AGATAATTCGCAGAATACGGGCAAATAAAAAAAACCGTGTGTCTGATTTT
CAATCACTTCTTGTTTCTTACATTTTCCTACGAAAATTCACAAACTATTT
CCACAAAAATTTTCTTCTTGACATTTCAGCAAATAAAAGTTGGTACACAC
CTATCATTAGCGGTGATATTCCGAATCCTCGATCGGAGTAAGTTCCTCAC
TCTAGATTTGACAGCATCTCGTCGATCTTTTAATAACACTCCTGTACTGG
TAAGAATGGAATTGTCTTTCATATGTGGGAATTCAGATTCTACCGTGGTT
GATCTGGTATTTCGAGGTTTTTGGTTATTTTGCTTTCGGCAGCCGCCTTT
TTAAGAGGCGGCCGCCAGTTATAATCCGCGGCCGCCTTTTACAAAGAGCG
GCCGCCTTTTATGATAAGCGGCCACCTTTTTCCTTCGAAAAAGGAGACCG
CCCTTTATAACTGGCGCCCACTCTTTATAACAGGCGGCCGCCCTTTAAAA
ACGCGGCCGCTATTTATAAAGGGCGGCCACGTTTTTTAAAAGGCGGCCGC
TTCTTTTACCGCCTTTTTCATAATCTGGTCTGTGAAATACAAGAGTCGTC
AAAGTTAATCGCGTGGTAAGGATAGGATTAGAGTGTAAATATATATACAC
AGTATAATATAATATACAATATACAGTACTGTACAGTACTGTAATCGAGA
TAATGTTTTTAGAGCCGAACATCAACTTGGGTGTGATTGACCTAGTCAAA
TCCTTCTCACCACACTCACCACATACATAAAATCACATGGGTAGCTACCA
TGTTTGTTTATGTTTAGCCAATACATTTCACAGACCAGATTATGAAAAAC
GCGGTAAAAAACGCGGCCACCTTTTATAAAACGTGGCCGCCCTTTATAAC
TGACGGCCGTCCTTTATAAATAGCGGCCGCGTTTTTAAAGGGCGGCCGCC
TGTTATAAAGAGTGGCCGCCTTTTTCGAAGGAAAAGGGTGGCCGCTTATT
ATAAAAGGCGGCCGCCAGTATTATAGGCGGTCGCTCTTTGTAAAAGGCGG
CCGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGAAATACCAGATC
AGCCACGGTAAGATTCTATTGCTTACCCAAAAGATTCAGTTGGGATTCTC
AAAGCTTTAGGGTCAGTGAAGAGTAGCTTTCTAATGAAAGAGGGAGATGG
AATTTCAGGGTGTTTCTTAACGCCTGGGATTATTTCTTGAACTGTCCTGA
ACAGTAATTTTTCCGATAGGTAAATGTAAATGGTTCTGTGACATAGGGGT
GTTGAATATTTTGGAGAATTATTTGCTGAATCTAAAAATGCTTTTTGGCA
TTAGCTGCTTTTCAGTCGTTTATTCATCTATCCAACGATGTAAAAATAAT
AGANATTGAGCCAAGGGCGGGTATTTTAAGGTATCCTCAGAACATTTATA
TCGTGTACATCCTTAAAGTTTTTCGAGATAATTCGCAGAATACGGACAAA
TAAAAAAAACCGTGTGTCTGATTTTCAATCACTTCTTGTTTCTTACATTT
TCCTCCGAAAATTCACAAACTATTTTCCACAAAAATTTTCTTCTTGACAT
TTCAGCAAATAAAAGTTGGTACACACCTATCATTAGCGGTGATATTCCGA
ATCCTCGATCGGGGTAAGTTCCTCACTCTAGATTTGACAACATCTCGTCG
ATCTTTTAATAACACTCCTGTACTGGTAAGAATGGAATTGTCTTTCATAT
GTGGGAATTCAGATTCTACCGTGGCTGATCTGGTATTTCGAGGTTTTTGG
TTATTTTGCTTTCGGCAGCCGCCTTTTTAAGAGGCGACCGCCAGTTTTAA
TCCGCGGCCGCCTTTTACAAAGAGCGGCTGCCTATAATACTGGCGGCCGC
CTTTTATGATAAGCGGCCACCTTTTTCCTTCGAAGAAGGAGGCCGCCCTT
TATTACGATGGCCCCTAAGGCTCACCACGCACTTCCAGTTCTTATAAAAT
TTGTGAACTAGAACTGTCTAGGGTCATGGCCCAGAAGGCTCACAAGACAC
TGCGCACTTCCGAGTTTTTTTGTGACGACATTGCACACTTCTAAAAATAT
TTTAGAAACGTAAAAGTCCCCCTCGAAAGATAGCCGTTCTGGTCAGCAAA
ATAGATACCGAGTTGTAATAAGTGAGTTGATGATAATAGCGAAGAGGCTC
GGAAATCCCGAGTTATTTTCTTGAGTTCAAAAGCCGAGTTAGTTACGAAA
AACCGAGTTATGACGTTATTTTTCGGAAATTTCGACGTCATTTTGTACCT
TCTATATGACGTCATTCTCAATTCTGTAGCTCGTTTTTTTTCCTTGCCTT
TAAAATTTCGAGTTATCTCTGATGGTATCTAAACTCAAGTAAGTCCTGCC
TTTAAATTTTCGAGTCATTTCTCGTTTTTTAACTCGGTTTTGTTTCTTTT
AAATTTTCGAGTTATTTTCCTTCCTGTACATTCTCGGATTCTCGAATTAT
TTTCACAGCAGAAGGCTCAAAACACACACACACACACACACTTCTAGTTT
TCATGCACTTAGGGTGGTCCTATGGCGGAAAATACCAGCGGCGTGGAGGC
AAAAAAACAAAGTTGATATTTGCTCACTTTTTGCTTCCCAGATTTTTGCC
ACTGGGGGGAATTTTGCAGACCAGGACTTAACTCAGAAATTTTAACCTGT
AACTCTTGATATGAGCAACTCGGAAATTTTAACTCATTTTGCGTAACTCG
ACATTCATTTTATAGACCAAAAAAAAAATTGATCGCGCGGGCCGCTCGCT
TGGAAATTTCCCGCCCTGACAAAAAGTCAGAAGTGCGCAGTGTCACTTGA
GCCTTCTGGGCCATTGACCATAGGCAGTTCTAGTTCACAAATTTTATAAG
AACTGGAAGTGCGTAAAAACTAGAAGTGCGTGTTTTGAGCCTTCTGGGCC
ATCGTACTAACGGATATAAGGTTGGTTCTTTCCGGACATCTCAGCAAACC
TTTGATAGCTGGTTTGCTATGAAGCCGCTGATATCGTTGTGCCTCATTGA
TACGAAACCACCTTTTTTGCACGTCAGGGCATATTCGAGCGAGAACGGAG
TTCCACATTTGCAATGGGAAGGTGTACGCTGTGTAATGCCCACCCGTAAC
GGATTCTGATTAGGTCAACGAAACATTGCTTGTTGAGAATGTATCCTTCG
TTTTGAACAGGCAAAGTCGTGAGCCATGCTTAGGCTCTGTGTTGTCGATT
GAGCTCCATCAGCTGGACTTGATTTCTTTGGAGAGTCAGGTCGTTGTGAG
GTGAAGAACGATGTTGCTATTTCGTTCCCTCTTTTCATTCTTGATTTTCT
TTGTAGGCAGGCGAGGATCAAGTTTATATGCATATTCTTGGCTTACGATT
GTCTCGGATAGATTGGATGTGATGAGTAGTAGTAGTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGTCAAAAAGTG
TGTCAAAATCTAGCTAAAAGCATAACACGCACTGCACACAGAGCTTTTTA
ATAGAGTGCTCATTTCAATAGGAAAACAATGGTTGTTCTCTTGAGAGAAG
TGCCTTCTAGAGGTAGTTGGTTATCTATTATTTTTACATCGTTGATCTAT
CTTTGTAGTCATTCAGCAGTGATGATTGGTTCCAAATTGTACATTTTCGG
TGGCTGGGATGCGCCGACCTGTCATGATGATATCTATTGTCTCGATATAG
GTAAATTACAACATTTGTATATCCTTTCAACTCGTATCATTGTTTTCCTT
CGGAGACAAATTTCCATTCATTTTCACCGCCTATGGAATAACAATAGGAT
CCCAAAAGAAAATCATCTCAACTGAAAAGACAACTAAAAAAACTTGTCTT
TTAAACTTGTTGGCTATCGAAAAAGATCTTCAATTCATTATATGCACCAC
TGCAATGACTTCACGAAATTATGCAACTTTTCTGTTTTTGTTCCACCCAA
TACGTCACTTTTTCTATTCTTAAAGTGACATATTGGATGGAAAATCTTAA
AAGTTCTCAGAAGACTCTTCAGTGGTGCAAATCATGAATATTTTAATAGA
GTAGATATTCAATACTTTTATGCAATAAGTTCCATATTTTAATGCAAGAT
CATTTTAAAGCCAAGTATTTCTTCCCAGCGACGACTTTACTAAACAACCA
CTTTAGTTTGGTCAAATTTAATCGTTTTAACTTTAACTTTCTCTTCATAG
TCATAATGAAGTATACGAGATTGAAACCTATTGGTGAAGGTCCGTCTGCC
CGTACTTGGCATTCCACCTCTGTTCTATCAAATCCAAATCAATTTTGTAT
TTATGGTGGCTTCGATGGCAACGACAGTTTGAATGATCTTTTTGTTTTCG
ATTCAGGTAAACCGTGCCAAAAAAAGGCTAGGAAATTGAGCTTTTTTTTG
ACAGGAACTCGTCTTTTTTTACAAGGGAAAACACGTACTCAGGACTCGGG
GTTCTGAGGCTGTTTGACTTTAGTCTTCTTTACCTGACTATACCAAATTT
ATTTTGTGTTATTAATTTCGCATTGCGAAAGTATTACGATAGCCTTTCGC
GGCGGCGGTGTCCTCGGAAAAAAAATTAGAAAACGAAAGTGCTTGATACG
GTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTTGTTTTGTTTTGAGATTACTTCTTT
TCTTCTGTTTTAGTCAAAACGTGTTGGAGCAAGATACATAACGAGCATAA
TTCCATTTTACGTGCTGGTCATACATCACTGTTGATGACGTCACCATATA
GTGATGATGACGTCACAAAAGCCAACAACAAAAGTCAGGTGTTAATTTTC
GGAGGCGGTGATAACGCCGGACAATTTTATAACGATGTCATTCTACTGGA
TGTGAAATAGCAAAAGTGTCGTTTACTATATTTCGTGTTTTTTAATATTT
TTTTTTTGGTATTTTTATTTAGTATGATTCTTATGTTTATCTCTTTTAGG
CGAGATTAGGTAAAGAATATTATCATTTAAGATTCTCCATATTTGTGGTA
GTGTATATAGAATTAAAGGGACATAAAAGTACTGACGAAATTAGTAAACA
AACCATATGTGGCGGGATACAAAATCAAAACAAATGTCACATGTCAAAAT
CAAAAATCAAAANNNNNNNNNNNNNNNNNNNAAAATCAAAACAAATGTCA
CATGTCAAAATCAAAAATCAAAACAAATATGGCTGATTTTGATTGTTTCA
ATTGTTTTACAAGTTTGTTTTGGACACGTGATTTTAATTGTTTTCTTTAA
TGACACGTGGTTTGTGCAATGTTTACATTTTACTACTTTTATGTCCCTTT
AAGCAGGCAGCAATTATGTGTGATTTCAGGAGTTCTATATGTGCTTTAAC
CTCCTTTCAGAGAGATGAGTTAAATACCGAAATTCATGATATTCATGACG
TAATGTTTTCTACGGAAAGACCCCGGTTTTTGCCAGTAGTGGCACTTTTT
TACACCTTTTGTCTAGTTTATAAGTGCCACTACTGGCTAAAACCGAGGTA
TTTCCGTAGAAAACATTACGTCATGACTATCAAGAAATTAATTCGTAAAT
GCATGCTCCTCCCATGCTCCTCTGATCTTACGCGAATTGTATTCACGAAT
TTTGAATTGAATGAACATTACTTGCAAATTTCTTTTCATATTTTAATATA
TATTAAAACTTTAAATCCGAATGTGGTTTTAGAATGATCCAAAATTACTT
ATACTTTGTATGACGTCCTGTTGTTATCTATTCATTATTTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045598XLOC_045598Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073468-exon-scaffold_92-1575043694:269658..269889TCONS_00073468-exon-scaffold_92-1575043694:269658..269889Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1575043694:268996..269384TCONS_00073468-exon-scaffold_92-1575043694:268996..269384Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1575043694:268209..268345TCONS_00073468-exon-scaffold_92-1575043694:268209..268345Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1575043694:267776..267892TCONS_00073468-exon-scaffold_92-1575043694:267776..267892Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1575043694:267246..267427TCONS_00073468-exon-scaffold_92-1575043694:267246..267427Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1575043694:266697..266835TCONS_00073468-exon-scaffold_92-1575043694:266697..266835Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1575043694:266291..266410TCONS_00073468-exon-scaffold_92-1575043694:266291..266410Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1575043694:261840..261931TCONS_00073468-exon-scaffold_92-1575043694:261840..261931Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1575043694:261184..261339TCONS_00073468-exon-scaffold_92-1575043694:261184..261339Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1575043694:259747..260826TCONS_00073468-exon-scaffold_92-1575043694:259747..260826Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1510915933:269658..269889TCONS_00073468-exon-scaffold_92-1510915933:269658..269889Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1510915933:268996..269384TCONS_00073468-exon-scaffold_92-1510915933:268996..269384Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1510915933:268209..268345TCONS_00073468-exon-scaffold_92-1510915933:268209..268345Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1510915933:267776..267892TCONS_00073468-exon-scaffold_92-1510915933:267776..267892Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1510915933:267246..267427TCONS_00073468-exon-scaffold_92-1510915933:267246..267427Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1510915933:266697..266835TCONS_00073468-exon-scaffold_92-1510915933:266697..266835Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1510915933:266291..266410TCONS_00073468-exon-scaffold_92-1510915933:266291..266410Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1510915933:261840..261931TCONS_00073468-exon-scaffold_92-1510915933:261840..261931Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1510915933:261184..261339TCONS_00073468-exon-scaffold_92-1510915933:261184..261339Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1510915933:259747..260826TCONS_00073468-exon-scaffold_92-1510915933:259747..260826Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1491911889:269658..269889TCONS_00073468-exon-scaffold_92-1491911889:269658..269889Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1491911889:268996..269384TCONS_00073468-exon-scaffold_92-1491911889:268996..269384Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1491911889:268209..268345TCONS_00073468-exon-scaffold_92-1491911889:268209..268345Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1491911889:267776..267892TCONS_00073468-exon-scaffold_92-1491911889:267776..267892Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1491911889:267246..267427TCONS_00073468-exon-scaffold_92-1491911889:267246..267427Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1491911889:266697..266835TCONS_00073468-exon-scaffold_92-1491911889:266697..266835Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1491911889:266291..266410TCONS_00073468-exon-scaffold_92-1491911889:266291..266410Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1491911889:261840..261931TCONS_00073468-exon-scaffold_92-1491911889:261840..261931Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1491911889:261184..261339TCONS_00073468-exon-scaffold_92-1491911889:261184..261339Clytia hemisphaericaexon
TCONS_00073468-exon-scaffold_92-1491911889:259747..260826TCONS_00073468-exon-scaffold_92-1491911889:259747..260826Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_92supercontigscaffold_92:259747..269889 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (1.65155 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	3.74239e-06	4.10747e-10	1.33527	0.792852	0	1.46005	0.365314	1.13913	0.677022	0.496088	0.580779	0.163983	0	0	0	0.196584	0	0	0	0	0	0	0.203102	1.65155	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073468 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
200400600800100012001400160018002000220024002600Expect = 4.00e-17 / Id = 23.89Expect = 4.00e-17 / Id = 23.89SequenceRABEK
Match NameE-valueIdentityDescription
RABEK3.998e-1723.89Rab9 effector protein with kelch motifs OS=Homo sa... [more]
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