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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073418 ID=TCONS_00073418|Name=TCONS_00073418|organism=Clytia hemisphaerica|type=transcript|length=850bp
ACCAAGAAGACACTGTTGAAGAGGTTGAACATCCACATATTGAAGGAAAC
CGAGAAATTACTGTTGATCAAATTGAACATTCACATATTGAAAGAGAGGT
TCCGCTTCACTCAAATCCTGCTGTTGAAAGAGCAATTCAAGAATTATAAT
TATAATCAATGATGCTGAGAGGCTGCACTCGGTGGAACATTGTATGAGTT
GTTATGAGACTAGGCCTATTTATCATGTATTATCCGAGAAAGAAAAAAGG
TTTCTCAATGGTAGATGTAAAAGATGCAcagatgaaataaaaaagaacaa
atacaAGAAACACATCAATAGGTCGTTGATGTTCTCAGGATTGTATTCCC
CAGTTGAAGATTGTTTCTTGGAAAATGGGATGCATTATCACAATAACCAA
CACTTCAAGGAAATTCCCCCTTTTCTTCAAAACCTGACATTTGTCGAAAG
TCTTTTGATAAGAAAAATATCCATTGCCATTTATGTGCATTGTCTGAAGT
ATGGGATGTTAGCCTCTAAAGGTCATACAGTAGCTATACCACATGACCTA
AGAAAATTTACCAAACTACCACAACTGCCATCTGAAGTTGGTATTCTTCT
TATAAGAGGTGGTAAAAACAGCTCAAAAGCATACATGGCTTGTAGGCAAA
GAATTGAGCAGGCTTTGGTTGGTCTAATATTTGGTGTTCCAAAGTATGGT
GAAAGTGCACCAAGACCAGGATTTACCCGTTATACAGGTAAAGACCATGT
GTCTGGTATTGGGCTAAATGGGAGATTCTTTTTGTACCAGCCAAATCCAT
ATTATTGGGATGTGGTAATTGATGTTGATCGTTTGATGCatattccagaa Run BLAST on NCBI protein sequence of TCONS_00073418-protein >TCONS_00073418-protein ID=TCONS_00073418-protein|Name=TCONS_00073418-protein|organism=Clytia hemisphaerica|type=polypeptide|length=219bp
MSCYETRPIYHVLSEKEKRFLNGRCKRCTDEIKKNKYKKHINRSLMFSGL
YSPVEDCFLENGMHYHNNQHFKEIPPFLQNLTFVESLLIRKISIAIYVHC
LKYGMLASKGHTVAIPHDLRKFTKLPQLPSEVGILLIRGGKNSSKAYMAC
RQRIEQALVGLIFGVPKYGESAPRPGFTRYTGKDHVSGIGLNGRFFLYQP
NPYYWDVVIDVDRLMHIPE Run BLAST on NCBI transcript from alignment at scaffold_91:50226..51075 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073418 ID=TCONS_00073418|Name=TCONS_00073418|organism=Clytia hemisphaerica|type=transcript|length=850bp|location=Sequence derived from alignment at scaffold_91:50226..51075 (Clytia hemisphaerica)
ttctggaatatGCATCAAACGATCAACATCAATTACCACATCCCAATAAT
ATGGATTTGGCTGGTACAAAAAGAATCTCCCATTTAGCCCAATACCAGAC
ACATGGTCTTTACCTGTATAACGGGTAAATCCTGGTCTTGGTGCACTTTC
ACCATACTTTGGAACACCAAATATTAGACCAACCAAAGCCTGCTCAATTC
TTTGCCTACAAGCCATGTATGCTTTTGAGCTGTTTTTACCACCTCTTATA
AGAAGAATACCAACTTCAGATGGCAGTTGTGGTAGTTTGGTAAATTTTCT
TAGGTCATGTGGTATAGCTACTGTATGACCTTTAGAGGCTAACATCCCAT
ACTTCAGACAATGCACATAAATGGCAATGGATATTTTTCTTATCAAAAGA
CTTTCGACAAATGTCAGGTTTTGAAGAAAAGGGGGAATTTCCTTGAAGTG
TTGGTTATTGTGATAATGCATCCCATTTTCCAAGAAACAATCTTCAACTG
GGGAATACAATCCTGAGAACATCAACGACCTATTGATGTGTTTCTtgtat
ttgttcttttttatttcatctgTGCATCTTTTACATCTACCATTGAGAAA
CCTTTTTTCTTTCTCGGATAATACATGATAAATAGGCCTAGTCTCATAAC
AACTCATACAATGTTCCACCGAGTGCAGCCTCTCAGCATCATTGATTATA
ATTATAATTCTTGAATTGCTCTTTCAACAGCAGGATTTGAGTGAAGCGGA
ACCTCTCTTTCAATATGTGAATGTTCAATTTGATCAACAGTAATTTCTCG
GTTTCCTTCAATATGTGGATGTTCAACCTCTTCAACAGTGTCTTCTTGGT
Coding sequence (CDS) from alignment at scaffold_91:50226..51075 >TCONS_00073418 ID=TCONS_00073418|Name=TCONS_00073418|organism=Clytia hemisphaerica|type=CDS|length=657bp|location=Sequence derived from alignment at scaffold_91:50226..51075 (Clytia hemisphaerica)
ttctggaatatGCATCAAACGATCAACATCAATTACCACATCCCAATAAT
ATGGATTTGGCTGGTACAAAAAGAATCTCCCATTTAGCCCAATACCAGAC
ACATGGTCTTTACCTGTATAACGGGTAAATCCTGGTCTTGGTGCACTTTC
ACCATACTTTGGAACACCAAATATTAGACCAACCAAAGCCTGCTCAATTC
TTTGCCTACAAGCCATGTATGCTTTTGAGCTGTTTTTACCACCTCTTATA
AGAAGAATACCAACTTCAGATGGCAGTTGTGGTAGTTTGGTAAATTTTCT
TAGGTCATGTGGTATAGCTACTGTATGACCTTTAGAGGCTAACATCCCAT
ACTTCAGACAATGCACATAAATGGCAATGGATATTTTTCTTATCAAAAGA
CTTTCGACAAATGTCAGGTTTTGAAGAAAAGGGGGAATTTCCTTGAAGTG
TTGGTTATTGTGATAATGCATCCCATTTTCCAAGAAACAATCTTCAACTG
GGGAATACAATCCTGAGAACATCAACGACCTATTGATGTGTTTCTtgtat
ttgttcttttttatttcatctgTGCATCTTTTACATCTACCATTGAGAAA
CCTTTTTTCTTTCTCGGATAATACATGATAAATAGGCCTAGTCTCATAAC
AACTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073418-exon-scaffold_91-1491911889:50226..51075 | TCONS_00073418-exon-scaffold_91-1491911889:50226..51075 | Clytia hemisphaerica | exon |
| TCONS_00073418-exon-scaffold_91-1510915933:50226..51075 | TCONS_00073418-exon-scaffold_91-1510915933:50226..51075 | Clytia hemisphaerica | exon |
| TCONS_00073418-exon-scaffold_91-1575043694:50226..51075 | TCONS_00073418-exon-scaffold_91-1575043694:50226..51075 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_91 | supercontig | scaffold_91:50226..51075 . |
Blast
The following BLAST results are available for this feature:
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