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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073411 ID=TCONS_00073411|Name=TCONS_00073411|organism=Clytia hemisphaerica|type=transcript|length=902bp
CGGCAAAGTTGAGTAGAGGATAATTTTTATCAATCAGTTTTGGCAACATT
GATTGTGAATCAAAATGCAGGAAAATGATTTGGTCAGATACTTCCTTTAT
ATATTGTTACTGGCTCTCATCACCATAAAAGGTTGCAACGGaaagaatgt
ttacatttcATATATCAACGGGCAAGATCTTCCAGGTTGTGGTACTCAGG
AATCGACCCCTTGTTCGTCATACCAATATGCAGATCTGAATAACATCGTC
ACaaataatgacgtaatcttgttCTTAAACATGGAATCAAAATTACCGGC
TTTTCAAAAATCCTTGGAAATAAAACATTTGAACCTGACATTCATTACCT
TAGAACCGAAGAGAGTTAAATCAGGGGCAGATTCAAATGGACACAAATCT
CCAGATCATACTTCAAGTCAAAAAGGTCCAACATCCCGGATCGAGTCTCC
TCGATTTCCAAACTTACCGCCGTCAAGAAAAGTTAGATCATCTTTGGATT
CGAAAGATGATCAATATTCAAGAAATATGGAAATCGTCGTCGATGGAGAA
ATAGAAGGAAACCATGCTCAACCAGATTCCCAAAGCACCACATTTCATAC
CAACCAACCAAATTCTAATTCCGAAAACAGATCTATAAATTTGTCTGAAA
ATTCCTTATTCCGATTATCCAAGAACATCTCTAACACACCATTACCAGAA
CTCCAAAATAAAACACCAGAACCTACATCACAATTAATCAACCTAACTCT
AATTGGATTCAAGTTCACCAATATCATTCTGTTAGATGCTACCAGAGCTG
TTGGAGCTCACCTGGAGATCTCTTTGCATTTGATTGATTGTTGGATTGGA
AACAATGTCATTTTCACCAAGGACGATAGAATCCAAAATGAACAACATAA
CA Run BLAST on NCBI protein sequence of TCONS_00073411-protein >TCONS_00073411-protein ID=TCONS_00073411-protein|Name=TCONS_00073411-protein|organism=Clytia hemisphaerica|type=polypeptide|length=279bp
MQENDLVRYFLYILLLALITIKGCNGKNVYISYINGQDLPGCGTQESTPC
SSYQYADLNNIVTNNDVILFLNMESKLPAFQKSLEIKHLNLTFITLEPKR
VKSGADSNGHKSPDHTSSQKGPTSRIESPRFPNLPPSRKVRSSLDSKDDQ
YSRNMEIVVDGEIEGNHAQPDSQSTTFHTNQPNSNSENRSINLSENSLFR
LSKNISNTPLPELQNKTPEPTSQLINLTLIGFKFTNIILLDATRAVGAHL
EISLHLIDCWIGNNVIFTKDDRIQNEQHN Run BLAST on NCBI transcript from alignment at scaffold_91:364186..365918- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073411 ID=TCONS_00073411|Name=TCONS_00073411|organism=Clytia hemisphaerica|type=transcript|length=1733bp|location=Sequence derived from alignment at scaffold_91:364186..365918- (Clytia hemisphaerica)
CGGCAAAGTTGAGTAGAGGATAATTTTTATCAATCAGTTTTGGCAACATT
GATTGTGAATCAAAATGCAGGAAAATGATTTGGTCAGATACTTCCTTTAT
ATATTGTTACTGGCTCTCATCACCATAAAAGGTGAGTACGCCAGTATGTG
TTTTAACTAATCATAAAGTCAATACTTTACGTGGTAGAGTCGATATTTAA
CGTTGATAGCCCAGTAATCTAAGACTTTTAGGCAGTCTTTCGATGTTTTC
ACGGAGTGTACGGCCAGCCGGCTCGGCTTTCTATGAATTGAACGGAACAT
TGGAAGGAGCGGGAATTCGGACCGCGAATCCCTGGTTTGAAACGCTGACG
CCTTTGACCACTTGACCATCGCTCCTTATTACTCTGGTTACTCTAGTATT
TTTGGACTGTTAGACTTGATAGACTTTGTTTTTACAGGGTCCTATTAGTC
CACAGAGGGTCCGCATATTATGGGGCATGGAGTACCACCTTGGTGGTAAC
AAGGTTTGAGACTGTTTTTAATTTTGAACATACTTTTTATATTTTTATTG
GAATCATGGTGGTTTTTAGGCTAGTTAGGGGGCAAAATGCTACTAGGGAG
GTCTTTAAAGGCTACCTAGCAATCATTGTTGGACACATTTGCCTGGGGTA
GGGCCACTTCATTTTTAAAAATACGGAACTACTGAAACCACTTGGCTACA
GTATTTTAGCGGCCTTTTGGCAGTGTGTGTGTTCATTATAAAATTCTCTT
CACTTTAAAAGTGTGTAAAATTCTTGCTCTTATTTAGTCAGAATAGCAGA
CCTCTATAGATATACTTCTTATAAGAAACTCTTTTCGCTAGAAGATGAGC
AGAAGCCTAGCTCTTATTATAATATTTTAAGTATTGTTATTCTAAGTCTT
TTCAATAATAAATCTATACCTCCTACCGACTGTTATGTTAATTTGCCATT
TTCCTTAACCAGGTTGCAACGGAAAGAATGTTTACATTTCATATATCAAC
GGGCAAGATCTTCCAGGTTGTGGTACTCAGGAATCGACCCCTTGTTCGTC
ATACCAATATGCAGATCTGAATAACATCGTCACAAATAATGACGTAATCT
TGTTCTTAAACATGGAATCAAAATTACCGGCTTTTCAAAAATCCTTGGAA
ATAAAACATTTGAACCTGACATTCATTACCTTAGAACCGAAGAGAGTTAA
ATCAGGGGCAGATTCAAATGGACACAAATCTCCAGATCATACTTCAAGTC
AAAAAGGTCCAACATCCCGGATCGAGTCTCCTCGATTTCCAAACTTACCG
CCGTCAAGAAAAGTTAGATCATCTTTGGATTCGAAAGATGATCAATATTC
AAGAAATATGGAAATCGTCGTCGATGGAGAAATAGAAGGAAACCATGCTC
AACCAGATTCCCAAAGCACCACATTTCATACCAACCAACCAAATTCTAAT
TCCGAAAACAGATCTATAAATTTGTCTGAAAATTCCTTATTCCGATTATC
CAAGAACATCTCTAACACACCATTACCAGAACTCCAAAATAAAACACCAG
AACCTACATCACAATTAATCAACCTAACTCTAATTGGATTCAAGTTCACC
AATATCATTCTGTTAGATGCTACCAGAGCTGTTGGAGCTCACCTGGAGAT
CTCTTTGCATTTGATTGATTGTTGGATTGGAAACAATGTCATTTTCACCA
AGGACGATAGAATCCAAAATGAACAACATAACA Coding sequence (CDS) from alignment at scaffold_91:364186..365918- >TCONS_00073411 ID=TCONS_00073411|Name=TCONS_00073411|organism=Clytia hemisphaerica|type=CDS|length=1674bp|location=Sequence derived from alignment at scaffold_91:364186..365918- (Clytia hemisphaerica)
GTTGCAACGGAAAGAATGTTTACATTTCATATATCAACGGGCAAGATCTT
CCAGGTTGTGGTACTCAGGAATCGACCCCTTGTTCGTCATACCAATATGC
AGATCTGAATAACATCGTCACAAATAATGACGTAATCTTGTTCTTAAACA
TGGAATCAAAATTACCGGCTTTTCAAAAATCCTTGGAAATAAAACATTTG
AACCTGACATTCATTACCTTAGAACCGAAGAGAGTTAAATCAGGGGCAGA
TTCAAATGGACACAAATCTCCAGATCATACTTCAAGTCAAAAAGGTCCAA
CATCCCGGATCGAGTCTCCTCGATTTCCAAACTTACCGCCGTCAAGAAAA
GTTAGATCATCTTTGGATTCGAAAGATGATCAATATTCAAGAAATATGGA
AATCGTCGTCGATGGAGAAATAGAAGGAAACCATGCTCAACCAGATTCCC
AAAGCACCACATTTCATACCAACCAACCAAATTCTAATTCCGAAAACAGA
TCTATAAATTTGTCTGAAAATTCCTTATTCCGATTATCCAAGAACATCTC
TAACACACCATTACCAGAACTCCAAAATAAAACACCAGAACCTACATCAC
AATTAATCAACCTAACTCTAATTGGATTCAAGTTCACCAATATCATTCTG
TTAGATGCTACCAGAGCTGTTGGAGCTCACCTGGAGATCTCTTTGCATTT
GATTGATTGTTGGATTGGAAACAATGTCATTTTCACCAAGGACGATAGAA
TCCAAAATGAACAACATAACATGCAGGAAAATGATTTGGTCAGATACTTC
CTTTATATATTGTTACTGGCTCTCATCACCATAAAAGGTTGCAACGGAAA
GAATGTTTACATTTCATATATCAACGGGCAAGATCTTCCAGGTTGTGGTA
CTCAGGAATCGACCCCTTGTTCGTCATACCAATATGCAGATCTGAATAAC
ATCGTCACAAATAATGACGTAATCTTGTTCTTAAACATGGAATCAAAATT
ACCGGCTTTTCAAAAATCCTTGGAAATAAAACATTTGAACCTGACATTCA
TTACCTTAGAACCGAAGAGAGTTAAATCAGGGGCAGATTCAAATGGACAC
AAATCTCCAGATCATACTTCAAGTCAAAAAGGTCCAACATCCCGGATCGA
GTCTCCTCGATTTCCAAACTTACCGCCGTCAAGAAAAGTTAGATCATCTT
TGGATTCGAAAGATGATCAATATTCAAGAAATATGGAAATCGTCGTCGAT
GGAGAAATAGAAGGAAACCATGCTCAACCAGATTCCCAAAGCACCACATT
TCATACCAACCAACCAAATTCTAATTCCGAAAACAGATCTATAAATTTGT
CTGAAAATTCCTTATTCCGATTATCCAAGAACATCTCTAACACACCATTA
CCAGAACTCCAAAATAAAACACCAGAACCTACATCACAATTAATCAACCT
AACTCTAATTGGATTCAAGTTCACCAATATCATTCTGTTAGATGCTACCA
GAGCTGTTGGAGCTCACCTGGAGATCTCTTTGCATTTGATTGATTGTTGG
ATTGGAAACAATGTCATTTTCACCAAGGACGATAGAATCCAAAATGAACA
ACATAACATGCAGGAAAATGATTTGGTCAGATACTTCCTTTATATATTGT
TACTGGCTCTCATCACCATAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073411-exon-scaffold_91-1575043694:365788..365918 | TCONS_00073411-exon-scaffold_91-1575043694:365788..365918 | Clytia hemisphaerica | exon |
| TCONS_00073411-exon-scaffold_91-1575043694:364186..364956 | TCONS_00073411-exon-scaffold_91-1575043694:364186..364956 | Clytia hemisphaerica | exon |
| TCONS_00073411-exon-scaffold_91-1510915933:365788..365918 | TCONS_00073411-exon-scaffold_91-1510915933:365788..365918 | Clytia hemisphaerica | exon |
| TCONS_00073411-exon-scaffold_91-1510915933:364186..364956 | TCONS_00073411-exon-scaffold_91-1510915933:364186..364956 | Clytia hemisphaerica | exon |
| TCONS_00073411-exon-scaffold_91-1491911889:365788..365918 | TCONS_00073411-exon-scaffold_91-1491911889:365788..365918 | Clytia hemisphaerica | exon |
| TCONS_00073411-exon-scaffold_91-1491911889:364186..364956 | TCONS_00073411-exon-scaffold_91-1491911889:364186..364956 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_91 | supercontig | scaffold_91:364186..365918 - |
Blast
The following BLAST results are available for this feature:
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