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TCONS_00073408 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073408
Unique NameTCONS_00073408
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length993

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073408 ID=TCONS_00073408|Name=TCONS_00073408|organism=Clytia hemisphaerica|type=transcript|length=993bp
TGTGAAGTTGATAgattgataaaaaatatcaaaaatggaacAACAGATAT
GAATTGGGATTCCATTTGCCTCAAccTTGCAGGAGCAGGTGGACCAGTGG
TGTGTCGACCATCAACAATATTAATGTTATGGAATTACGATTGCAACATT
GTGAAACAGTTGAACCAATCACAAATCCTGGCCAAAGTCAATGATGATAC
TGCACTGCAAACATTAACCGGGAAAATCAATTTGGATTTATTGCTTGGTA
GTATTGTAAGGTCAAATGGTGACATCACTGGAGCAAGTGCAaccaaaatg
acttattttctGAAGAACCAGGAAGTGTATGTTGAAAGCCAGGGAAAAAA
TGTTGACCAGAAAGGAGAGGATTGGGAGACAGAGTTTTCTGATGTTTTCA
TCAAACAAAAGGTCACTGGTGGTTTTGACAAAgtatacattttttctttt
gtcagtcaacaAGACGAGAGTGGTGGACAAATTTCTgacgatttgaaatt
tttgtttgttgGTTATGTTTTGATCATTGCATACCTTGGTATCATGTTAG
GAAGTTTCTCCAGACTCGACCAAAAGgTTTGGTTAGCATTGTGTGGTGTT
TTGAACATTGGCCTTGCAATTGGTATTGCTTATGGATTATCAAGTGCATT
CCAACTCTTTTCAACACCCGTCCACAGTGTTCTACCCTTCTTGCTCCTAG
GTATGTTCCACTAcaaatacagtgtgtcccaaaaaaaaagcGGATAAAtc
tttatataaagtaaaatcctcaaactTCAATATCTAAACTGGGCTTAGAA
TAATAGCGCTTCGTTATGCAAACGTCATCATTATTTCATCTcccatttga
ccgaaattcaatcccacaatccttttcgtcttaattcaaaagtcttgaaa
gtcatttattttttatttttaattgagtgtaatttgcgtgtAAGCGTAAT
TAAcgcaaagggtgatgggatagaatttcggtcaaacagaaaa
Run BLAST on NCBI

protein sequence of TCONS_00073408-protein

>TCONS_00073408-protein ID=TCONS_00073408-protein|Name=TCONS_00073408-protein|organism=Clytia hemisphaerica|type=polypeptide|length=248bp
CEVDRLIKNIKNGTTDMNWDSICLNLAGAGGPVVCRPSTILMLWNYDCNI
VKQLNQSQILAKVNDDTALQTLTGKINLDLLLGSIVRSNGDITGASATKM
TYFLKNQEVYVESQGKNVDQKGEDWETEFSDVFIKQKVTGGFDKVYIFSF
VSQQDESGGQISDDLKFLFVGYVLIIAYLGIMLGSFSRLDQKVWLALCGV
LNIGLAIGIAYGLSSAFQLFSTPVHSVLPFLLLGMFHYKYSVSQKKSG
Run BLAST on NCBI

transcript from alignment at scaffold_91:340519..348072-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073408 ID=TCONS_00073408|Name=TCONS_00073408|organism=Clytia hemisphaerica|type=transcript|length=7554bp|location=Sequence derived from alignment at scaffold_91:340519..348072- (Clytia hemisphaerica)
TGTGAAGTTGATAGATTGATAAAAAATATCAAAAATGGAACAACAGATAT GAATTGGGATTCCATTTGCCTCAAGTAAGATTCACGTTTATTGATTTCAC ATTTCCTTTGTCTGAAACTTCTTCTATCTAATTTTCTATATCCAGTTGTC TCAGAGAGACTTTGTTGGTTACTTTGTAATCGATATGACGCTCTGCTAGA AAATATCTTGTCATCAATGTTTTTATAGTTTCAATTTCAATGCTTCTCGT TGTCATAGCAACCATCGTTTTTATTGTCTTTTTTTCAAGCATGACCTTTC AATAAACCGAAACAATTATTAAAGATATATTTTCTTCTTTTAGCCTTGCA GGAGCAGGTGGACCAGTGGTGTGTCGACCATCAACAATATTAATGTTATG GAATTACGATTGCAACATTGTGAAACAGTTGAACCAATCACAAATCCTGG CCAAAGTCAATGATGATACTGCACTGCAAACGTATGTATCATTTTAAAAT TATTTCATTATTTACAATGCCAAGTCTTTTTTTTTCATCGGCATGACCTA ATTTTTCTTTGACATGATCAAGATCAGCGTGATGTGTTATTTGGGCTAAT TTTCCAGCTGGCACACAACGTTTTTCAACGCTTATCTAAAGTTCACACCG CTCATACAACGTTAGATGAAAGTTGCGTGCCAGCAGGGTTAATGCTTTGT TACTGTTATTTTTGTGATGCACCAATTTTGGCGCAATTTTCTTACTTGTA ATTAATGATGGTTATGTCTTAAATTCACCTACCTTATTGGAACTTATTTT CGCTGAATTAATTTTAGCATTTTTGGCAGTTTTTCGTCAAAATCGCAAAA ATACGAGCCTGTGAAATATTTTGAGAGTTAAAAACCCCGAAAATTAATTC CCGCGAAATACATTTTATCGAAGGAAAATCCCTAGGAAAATGAAAGAAAT TTGTCCAAAAAAGGGCAAAACTGCAAAAATTCCAGAATAAAAAAAAAACG CGAAAATTAAATCCTGCGCAAATTAAATCCTGCGCAAATTAGTTCCAATA AGGTAGTCTTTTCTCTAATAACCCTCATTAAAAAAAATATTTTCAATACC AGAGAAGTTAATAAAGAAATCTTTAGGGCAACATCGCCCAACGATATGGA CCATCTCAAGTCAAAACCCCCCAAAATCGCCTAACTTTTTTAAAAGAACT TTTTTGACTTTAACAAAGGATAAATAAATGAGGTTAACTTATTTTTATTT GCTACTTTACATGCTAACTCAAAATTTATTCAGGTTCACAANNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATATATAC ATTATAGAGGTTAAGTGTTGAATTTAAAGAGATATTCTTGGTCAAAGTAG GGTTAAAAATATGAGGTTAACTTGCACTGAGGTTAACCTAATGGTCTGTA AAGATAGATCAAAATTGGTATGAAATGTGAGGTTGAAGCAAAAATAAATG ATTGGGTTTTACTATATAATGATTGGGCAACAAGCTAGGCTAGAAAAATG AGGTTAATATTTCAAGTAGGGTGTAAAATTTGAGGTTATTTCACAAAAAC ACCCTAATGTGAGGTTAACAATGATATTTCAGTCTAATTTTGGATATCAG ACAAACAGTAGCCTATTATCAAAAACAACTAAACATGAAATATTATATTT TGGTCTAAAAAGTGAGGTTAACTGGTATATTAACTTGAGAGACGCAAGTA CCTGAGAAAGGGTTTGATTTTAAGCTTTCAGAAATCCTGCATAGAAATGC AAAGTTGTGTAATAGAAATAGTGGGATCCATTATTCAATGGTTGAGGAAC AAGGTTAGATAGAAAAAAATGAGGTTAATATCTTAGTTTGGGTACCAAAA GTGAGGTTATTTGTGAATTGGGCTTATAGGGTTTTTAAATTCTTTGTTGT ATACTTTAATGACTTATAAATCTGTTTTTGATATCAATACTGAGCTTAAC TTTTTATCGTAGTATCCCTTAAACGTTTTTCGTTCAGTTGTTGTTTGACA AAAACAATGAAGTTTGAAGGTATAAACTAAAACATCCTACTTTTTCAGGT TGTTTAACCTCATTTTAAGAACCTTTTTGGTCTCTTTCATATTTTTTTAG CTTAGTTACTTTATGAAAACTTTTAAAAAGTAATTTTGTTCCTGTAGCTT TAATAGAACTATTTAGATCTATTAGAAAATCAAATTTCTCACATTCCTTA ACATAGAGTTTTAATTTTAACCTCAATTTTTAACCCTACATTAGAGCAAA GATTGTCAATTTCATAAAAACCCTATCGATCTAAGGTTCTAGTATCATTT TACTTTTGTCCCATAACTTAATACACATGCTAGCAGAAGATATGGTTAAG AATGTGAGGTTACATGTTACCATTTTTTTAACCTCATGAATTGCACCTTT CTTGTGGGAAATCTCTAACCTTTTTTAGACAAGCTTGATATTCGAAGCCT TTTTGATGACTCCCTAATAATTTTTTCCCCGATAATTCAATAAGCGTCTC TATATTTTGAGGTTAACAAAAGTCTATAAATTGTCATATTAACCTCAAAT AACAAACCTTTTTCAAGTTTTTTTTTCATTTTTGGGTNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN TTTTTTTTTCATTTTTGGGTATAAGCCATCAATTATGACCAACCCTCAAA ATTTCAACCTTTTTAGATAAAAAATGAAGATTATGTGGCCAATTATGTAA ATTTTTCCACTTTTTCCTCAAAAAAAATAACTTTTTCTTAGGTGACATTG ATTTGAGATTGTCCATATGAACGCATTTTATAATCCTCAAGGAAAATTTG TAGATTATTACCATTGTGATATTTTTTTGGTTCTAGATTAACCGGGAAAA TCAATTTGGATTTATTGCTTGGTAGTATTGTAAGGTCAAATGGTGACATC ACTGGAGCAAGTGCAACCAAAATGACTTATTTTCTGAAGAACCAGGAAGT GTATGTTGAAAGCCAGGGAAAAAATGTAAGACTTCTTTCTGGTGAAAATT TGAATACATAATTTTTTCATAGGTTACTTAGGGCTTTAAAATCATTTACA ATACATCTTTCAACTCTTAAAACATTATAAGACTGGGTCACAGTTTACCA GGTAGCATTGCTGTCAAAAATTTGTAGAGTTGATTTTCTCATAGACTCTC GCAGATTCTGATCTAATTTACTGCTGACAAGATACCAAATGAGTGTTCTA TTAGTATGGGCTAATGTAGAAAACATTTGTACTCCCAATGTTGAGGGGGT CATTTTTGGGAATATGACCCAGTTGGACTTTTTTCTAATTTTTTGGACCA CCCTGGACTCTTGACCTTACTGGCTTTTTAACCTTCATTTTACTAACCCC CCATATTTGCCATCACATTTTTCTGACCACCCTGGATTTTTGCACTCAAA AAACCCGACTATTCTAGAATGAGTGCAGACAAAAATGGCTAAATTTTAAA AACTTTGATTTTGTGTTTATTTTGCCCTTTATACCCATATTTAGATTAAA ACATTCAAGAAATACCCAAGAATAGCAATGCTGCAAAATATAAAAGGCTA AATTTTTCCTTGTATAGGTTGACCAGAAAGGAGAGGATTGGGAGACAGAG TTTTCTGATGTTTTCATCAAACAAAAGGTCACTGGTGGTTTTGACAAAGT ATACATTTTTTCTTTTGTCAGGTTAGAATTTATTTCCGTTTTCACTTTAT CTCAATCTACAGTAAAAGTATAGCCGATACTTGATTCCATTTTTCTGTGC ATTAATGTCTTTACAGATGTTTTTCATGCTTTTTAAAGTTTCGTAATCCC CCCCCCTTCAATTCTGTTAAGGCAATTCCTTTACTCAAGTTGAACGTTTG TTTCCATAATGGTGGAAGTCATTATGTCACTTGACAAAACATGAAAATAA CCTCTGTTCAACTTTACGATCTTTTCCAAATGTCTGTGGAGTCCGGGTTT TCAGGCTTTTTTAAAAACATTCAATTTTTCGACGTCACCTAAATTTCAAA GCAGTAGCGAGAAAAAAATGCATGCATAAAAGTTCTTCTTTCTTCATGAA ACTCACTAAGAAACCACAGATTTATGTAAAGCCTGAAGGGCTAGATGTCG TGCTTTAAGTCATGACAGGTAAAAAAAGTGAAGAAGAGAAAGAGTTGCTA TTGTTTTCGAAAATCTGCAAAGCTTCTGAATAGTCAAGCGCTGAAATCCT ATACTAATGTCACGTGACCTAGGTAGGATTTCCTACCTAACCACGGCACA CTTTCCAGACAAAGCACGACATCTAGTCCTTCACGCTTTATATAAATCTG TGCAAGTATAACGGAGTAAAAGATCTGGTTCTTGATAAGATACTCTCTAG TAAAGGCACTATTTGAACAGACTGTGGTTTTCATCTCCTAGTTGATGAAT TTCAATGCCAAATATTTTCTTATTTTTTGACTAAATTTCGATCAAATTTT TTACTTTCATTTTTTTTTCAGTCAACAAGACGAGAGTGGTGGACAAATTT CTGACGATTTGAAATTTTTGTTTGTTGGTTATGTTTTGATCATTGCATAC CTTGGTATCATGTTAGGAAGTTTCTCCAGACTCGACCAAAAGGTTTGTTC TCATTCATTCTTATTTCATATTCATTGGAAATTTCAGGTTTTTAAAGTTC TTTAACCCTATTCTTATTCATCGGAATCGGTTTTTAAAGTTCTTTAACCC TATTCGTTCGGGGGGGGGGGGCTGTTCCTGTTCAGAGGTCAAATTAATGT TAATAGCTCCTAAAATAATAGAGCTTTTGTCATGAAATTTTCTATAAATT CCTAACTTTTATTTAGCTTTAATAAAAAATTGACATCTAAAGATGTCTCA CACCTTGAGCATGATGACATTTCTGACAGTAAAGGGGCACAAAAATTGAC ACTTTTCCAATGCAATACAAATTTATTTTCTATGTCAAATATATCGTTTA AACCGTAATTTATTGAATATTTAGGATAAAAATAAGCATTTTAGACTCAG GGAACTTTTTTAAAGCTTTTGTTAGAAAACAATAGCTATTTGTAAGAACA AAGGAAATTCTCGGTTTTTGATCACTGTGGGCATGGTGAGTGACGTCATC AAAAAAATTATTTGTCAAAAGTTACCTTATGTGACAAAGATCTTGTGTGC CAAGATTTCATCCAAAAAGACCCACTAGATCAAAAGTTAAGGGGTGGTAC AGGAACACCCCCCTAGTTTTGAACCGCCCCTAAAAGCCTAGTATCAACGA TAGGTTTAAAGATGTTAACAATTTTATTCATAGATACCCACGTTATGATA AACTTTTTATTTATTTCTAAAATTATCTACATATATAATGTAACGCATGC ATCTAACATCGGTCGAACGANAGTCAAGCGCTGAAATCCTATACTAATGT CACGTGACCTAGGTAGGATTTCCTACCTAACCACGGCACACTTTCCAGAC AAAGCACGACATCTAGTCCTTCACGCTTTATATAAATCTGTGCAAGTATA ACGGAGTAAAAGATCTGGTTCTTGATAAGATACTCTCTAGTAAAGGCACT ATTTGAACAGACTGTGGTTTTCATCTCCTAGTTGATGAATTTCAATGCCA AATATTTTCTTAATTTTTGACTAAATTGGCTGTCTAAAACATGCTTTTAA GGTTTTTTACTTTCATTTTTTTTTCAGTCAACAAGACGAGAGTGGTGGAC AAATTTCTGACGATTTGAAATTTTTGTTTGTTGGTTATGTTTTGATCATT GCATACCTTGGTATCATGTTAGGAAGTTTCTCCAGACTCGACCAAAAGGT TTGTTCTCATTCATTCTTATTTCATATTCATTGGAAATTTCAGGTTTTTA AAGTTCTTTAACCCTATTCTTATTCATCGGAATCGGTTTTTAAAGTTCTT TAACCCTATTCGTTCGGGGGGGGGGGGCTGTTCCTGTTCAGAGGTCAAAT TAATGTTAATAGCTCCTAAAATAATAGAGCTTTTGTCATGAAATTTTCTA TAAATTCCTAACTTTTATTTAGCTTTAATAAAAAATTGACATCTAAAGAT GTCTCACACCTTGAGCATGATGACATTTCTGACAGTAAAGGGGCACAAAA ATTGACACTTTTCCAATGCAATACAAATTTATTTTCTATGTCAAATATAT CGTTTAAACCGTAATTTATTGAATATTTAGGATAAAAATAAGCATTTTAG ACTCAGGGAACTTTTTTAAAGCTTTTGTTAGAAAACAATAGCTATTTGTA AGAACAAAGGAAATTCTCGGTTTTTGATCACTGTGGGCATGGTGAGTGAC GTCATCAAAAAAATTATTTGTCAAAAGTTACCTTATGTGACAAAGATCTT GTGTGCCAAGATTTCATCCAAAAAGACCCACTAGATCAAAAGTTAAGGGG TGGTACAGGAACACCCCCCTAGTTTTGAACCGCCCCTAAAAGCCTAGTAT CAACGATAGGTTTAAAGATGTTAACAATTTTATTCATAGATACCCACGTT ATGATAAACTTTTTATTTATTTCTAAAATTATCTACATATATAATGTAAC GCATGCATCTAACATCGGTCGAACGAGAATGGTATTAACTGTTTTGAATA ATATCAGATGCATCATTATCTACGATTTTTTTTCAATTTACAATTTTCTT GGCATTGGAAAAAATCTTAAGAAAATACTGTTTCCATGTTGCCGATCTTT GACATAAGATTCTAATTCACTCGGATGAGATGGAGTTGTAAGCATTGTTA CTTTAATAATTGGTCATTTGAAGTAATAAAAATGACGCATTCTTTAGAAA AAGTATTAAAATTGTTTTATTACTAGTTAGAATTTGTAAAAACTCCATTT CGTCCAAATTCACTCATTCAAATTTCTTTTTTGATAGGTTTGGTTAGCAT TGTGTGGTGTTTTGAACATTGGCCTTGCAATTGGTATTGCTTATGGATTA TCAAGTGCATTCCAACTCTTTTCAACACCCGTCCACAGTGTTCTACCCTT CTTGCTCCTAGGTATGTTCCACTACAAATACAGTGTGTCCCAAAAAAAAA GCGGATAAATCTTTATATAAAGTAAAATCCTCAAACTTCAATATCTAAAC TGGGCTTAGAATAATAGCGCTTCGTTATGCAAACGTCATCATTATTTCAT CTCCCATTTGACCGAAATTCAATCCCACAATCCTTTTCGTCTTAATTCAA AAGTCTTGAAAGTCATTTATTTTTTATTTTTAATTGAGTGTAATTTGCGT GTAAGCGTAATTAACGCAAAGGGTGATGGGATAGAATTTCGGTCAAACAG AAAA

Coding sequence (CDS) from alignment at scaffold_91:340519..348072-

>TCONS_00073408 ID=TCONS_00073408|Name=TCONS_00073408|organism=Clytia hemisphaerica|type=CDS|length=4482bp|location=Sequence derived from alignment at scaffold_91:340519..348072- (Clytia hemisphaerica)
GTTTGGTTAGCATTGTGTGGTGTTTTGAACATTGGCCTTGCAATTGGTAT
TGCTTATGGATTATCAAGTGCATTCCAACTCTTTTCAACACCCGTCCACA
GTGTTCTACCCTTCTTGCTCCTAGGTATGTTCCACTACAAATACAGTGTG
TCCCAAAAAAAAAGCGGATAATCAACAAGACGAGAGTGGTGGACAAATTT
CTGACGATTTGAAATTTTTGTTTGTTGGTTATGTTTTGATCATTGCATAC
CTTGGTATCATGTTAGGAAGTTTCTCCAGACTCGACCAAAAGGTTGACCA
GAAAGGAGAGGATTGGGAGACAGAGTTTTCTGATGTTTTCATCAAACAAA
AGGTCACTGGTGGTTTTGACAAAGTATACATTTTTTCTTTTGTCAGATTA
ACCGGGAAAATCAATTTGGATTTATTGCTTGGTAGTATTGTAAGGTCAAA
TGGTGACATCACTGGAGCAAGTGCAACCAAAATGACTTATTTTCTGAAGA
ACCAGGAAGTGTATGTTGAAAGCCAGGGAAAAAATCCTTGCAGGAGCAGG
TGGACCAGTGGTGTGTCGACCATCAACAATATTAATGTTATGGAATTACG
ATTGCAACATTGTGAAACAGTTGAACCAATCACAAATCCTGGCCAAAGTC
AATGATGATACTGCACTGCAAACTGTGAAGTTGATAGATTGATAAAAAAT
ATCAAAAATGGAACAACAGATATGAATTGGGATTCCATTTGCCTCAAGTT
TGGTTAGCATTGTGTGGTGTTTTGAACATTGGCCTTGCAATTGGTATTGC
TTATGGATTATCAAGTGCATTCCAACTCTTTTCAACACCCGTCCACAGTG
TTCTACCCTTCTTGCTCCTAGGTATGTTCCACTACAAATACAGTGTGTCC
CAAAAAAAAAGCGGATAATCAACAAGACGAGAGTGGTGGACAAATTTCTG
ACGATTTGAAATTTTTGTTTGTTGGTTATGTTTTGATCATTGCATACCTT
GGTATCATGTTAGGAAGTTTCTCCAGACTCGACCAAAAGGTTGACCAGAA
AGGAGAGGATTGGGAGACAGAGTTTTCTGATGTTTTCATCAAACAAAAGG
TCACTGGTGGTTTTGACAAAGTATACATTTTTTCTTTTGTCAGATTAACC
GGGAAAATCAATTTGGATTTATTGCTTGGTAGTATTGTAAGGTCAAATGG
TGACATCACTGGAGCAAGTGCAACCAAAATGACTTATTTTCTGAAGAACC
AGGAAGTGTATGTTGAAAGCCAGGGAAAAAATCCTTGCAGGAGCAGGTGG
ACCAGTGGTGTGTCGACCATCAACAATATTAATGTTATGGAATTACGATT
GCAACATTGTGAAACAGTTGAACCAATCACAAATCCTGGCCAAAGTCAAT
GATGATACTGCACTGCAAACTGTGAAGTTGATAGATTGATAAAAAATATC
AAAAATGGAACAACAGATATGAATTGGGATTCCATTTGCCTCAAGTTTGG
TTAGCATTGTGTGGTGTTTTGAACATTGGCCTTGCAATTGGTATTGCTTA
TGGATTATCAAGTGCATTCCAACTCTTTTCAACACCCGTCCACAGTGTTC
TACCCTTCTTGCTCCTAGGTATGTTCCACTACAAATACAGTGTGTCCCAA
AAAAAAAGCGGATAATCAACAAGACGAGAGTGGTGGACAAATTTCTGACG
ATTTGAAATTTTTGTTTGTTGGTTATGTTTTGATCATTGCATACCTTGGT
ATCATGTTAGGAAGTTTCTCCAGACTCGACCAAAAGGTTGACCAGAAAGG
AGAGGATTGGGAGACAGAGTTTTCTGATGTTTTCATCAAACAAAAGGTCA
CTGGTGGTTTTGACAAAGTATACATTTTTTCTTTTGTCAGATTAACCGGG
AAAATCAATTTGGATTTATTGCTTGGTAGTATTGTAAGGTCAAATGGTGA
CATCACTGGAGCAAGTGCAACCAAAATGACTTATTTTCTGAAGAACCAGG
AAGTGTATGTTGAAAGCCAGGGAAAAAATCCTTGCAGGAGCAGGTGGACC
AGTGGTGTGTCGACCATCAACAATATTAATGTTATGGAATTACGATTGCA
ACATTGTGAAACAGTTGAACCAATCACAAATCCTGGCCAAAGTCAATGAT
GATACTGCACTGCAAACTGTGAAGTTGATAGATTGATAAAAAATATCAAA
AATGGAACAACAGATATGAATTGGGATTCCATTTGCCTCAAGTTTGGTTA
GCATTGTGTGGTGTTTTGAACATTGGCCTTGCAATTGGTATTGCTTATGG
ATTATCAAGTGCATTCCAACTCTTTTCAACACCCGTCCACAGTGTTCTAC
CCTTCTTGCTCCTAGGTATGTTCCACTACAAATACAGTGTGTCCCAAAAA
AAAAGCGGATAATCAACAAGACGAGAGTGGTGGACAAATTTCTGACGATT
TGAAATTTTTGTTTGTTGGTTATGTTTTGATCATTGCATACCTTGGTATC
ATGTTAGGAAGTTTCTCCAGACTCGACCAAAAGGTTGACCAGAAAGGAGA
GGATTGGGAGACAGAGTTTTCTGATGTTTTCATCAAACAAAAGGTCACTG
GTGGTTTTGACAAAGTATACATTTTTTCTTTTGTCAGATTAACCGGGAAA
ATCAATTTGGATTTATTGCTTGGTAGTATTGTAAGGTCAAATGGTGACAT
CACTGGAGCAAGTGCAACCAAAATGACTTATTTTCTGAAGAACCAGGAAG
TGTATGTTGAAAGCCAGGGAAAAAATCCTTGCAGGAGCAGGTGGACCAGT
GGTGTGTCGACCATCAACAATATTAATGTTATGGAATTACGATTGCAACA
TTGTGAAACAGTTGAACCAATCACAAATCCTGGCCAAAGTCAATGATGAT
ACTGCACTGCAAACTGTGAAGTTGATAGATTGATAAAAAATATCAAAAAT
GGAACAACAGATATGAATTGGGATTCCATTTGCCTCAAGTTTGGTTAGCA
TTGTGTGGTGTTTTGAACATTGGCCTTGCAATTGGTATTGCTTATGGATT
ATCAAGTGCATTCCAACTCTTTTCAACACCCGTCCACAGTGTTCTACCCT
TCTTGCTCCTAGGTATGTTCCACTACAAATACAGTGTGTCCCAAAAAAAA
AGCGGATAATCAACAAGACGAGAGTGGTGGACAAATTTCTGACGATTTGA
AATTTTTGTTTGTTGGTTATGTTTTGATCATTGCATACCTTGGTATCATG
TTAGGAAGTTTCTCCAGACTCGACCAAAAGGTTGACCAGAAAGGAGAGGA
TTGGGAGACAGAGTTTTCTGATGTTTTCATCAAACAAAAGGTCACTGGTG
GTTTTGACAAAGTATACATTTTTTCTTTTGTCAGATTAACCGGGAAAATC
AATTTGGATTTATTGCTTGGTAGTATTGTAAGGTCAAATGGTGACATCAC
TGGAGCAAGTGCAACCAAAATGACTTATTTTCTGAAGAACCAGGAAGTGT
ATGTTGAAAGCCAGGGAAAAAATCCTTGCAGGAGCAGGTGGACCAGTGGT
GTGTCGACCATCAACAATATTAATGTTATGGAATTACGATTGCAACATTG
TGAAACAGTTGAACCAATCACAAATCCTGGCCAAAGTCAATGATGATACT
GCACTGCAAACTGTGAAGTTGATAGATTGATAAAAAATATCAAAAATGGA
ACAACAGATATGAATTGGGATTCCATTTGCCTCAAGTTTGGTTAGCATTG
TGTGGTGTTTTGAACATTGGCCTTGCAATTGGTATTGCTTATGGATTATC
AAGTGCATTCCAACTCTTTTCAACACCCGTCCACAGTGTTCTACCCTTCT
TGCTCCTAGGTATGTTCCACTACAAATACAGTGTGTCCCAAAAAAAAAGC
GGATAATCAACAAGACGAGAGTGGTGGACAAATTTCTGACGATTTGAAAT
TTTTGTTTGTTGGTTATGTTTTGATCATTGCATACCTTGGTATCATGTTA
GGAAGTTTCTCCAGACTCGACCAAAAGGTTGACCAGAAAGGAGAGGATTG
GGAGACAGAGTTTTCTGATGTTTTCATCAAACAAAAGGTCACTGGTGGTT
TTGACAAAGTATACATTTTTTCTTTTGTCAGATTAACCGGGAAAATCAAT
TTGGATTTATTGCTTGGTAGTATTGTAAGGTCAAATGGTGACATCACTGG
AGCAAGTGCAACCAAAATGACTTATTTTCTGAAGAACCAGGAAGTGTATG
TTGAAAGCCAGGGAAAAAATCCTTGCAGGAGCAGGTGGACCAGTGGTGTG
TCGACCATCAACAATATTAATGTTATGGAATTACGATTGCAACATTGTGA
AACAGTTGAACCAATCACAAATCCTGGCCAAAGTCAATGATGATACTGCA
CTGCAAACTGTGAAGTTGATAGATTGATAAAAAATATCAAAAATGGAACA
ACAGATATGAATTGGGATTCCATTTGCCTCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045554XLOC_045554Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073408-proteinTCONS_00073408-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073408-exon-scaffold_91-1575043694:347999..348072TCONS_00073408-exon-scaffold_91-1575043694:347999..348072Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1575043694:347592..347729TCONS_00073408-exon-scaffold_91-1575043694:347592..347729Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1575043694:344848..344986TCONS_00073408-exon-scaffold_91-1575043694:344848..344986Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1575043694:344152..344255TCONS_00073408-exon-scaffold_91-1575043694:344152..344255Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1575043694:342025..342145TCONS_00073408-exon-scaffold_91-1575043694:342025..342145Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1575043694:340519..340935TCONS_00073408-exon-scaffold_91-1575043694:340519..340935Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1510915933:347999..348072TCONS_00073408-exon-scaffold_91-1510915933:347999..348072Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1510915933:347592..347729TCONS_00073408-exon-scaffold_91-1510915933:347592..347729Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1510915933:344848..344986TCONS_00073408-exon-scaffold_91-1510915933:344848..344986Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1510915933:344152..344255TCONS_00073408-exon-scaffold_91-1510915933:344152..344255Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1510915933:342025..342145TCONS_00073408-exon-scaffold_91-1510915933:342025..342145Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1510915933:340519..340935TCONS_00073408-exon-scaffold_91-1510915933:340519..340935Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1491911889:347999..348072TCONS_00073408-exon-scaffold_91-1491911889:347999..348072Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1491911889:347592..347729TCONS_00073408-exon-scaffold_91-1491911889:347592..347729Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1491911889:344848..344986TCONS_00073408-exon-scaffold_91-1491911889:344848..344986Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1491911889:344152..344255TCONS_00073408-exon-scaffold_91-1491911889:344152..344255Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1491911889:342025..342145TCONS_00073408-exon-scaffold_91-1491911889:342025..342145Clytia hemisphaericaexon
TCONS_00073408-exon-scaffold_91-1491911889:340519..340935TCONS_00073408-exon-scaffold_91-1491911889:340519..340935Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_91supercontigscaffold_91:340519..348072 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.26379 2.73084 2.79863 3.34753 19.0995 14.3803 7.09626 8.54012 4.03331 4.85625 7.40961 6.30887 6.62681 7.74991 3.86627 5.53654 12.3641 14.7591 7.61714 8.90312 31.2104 25.0942 5.63932 7.63037 30.2754 22.5235 5.63502 4.21013 1.1048 0.798633
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000731SSD
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073408 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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