TCONS_00073408-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073408-protein
Unique NameTCONS_00073408-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length248

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073408-protein ID=TCONS_00073408-protein|Name=TCONS_00073408-protein|organism=Clytia hemisphaerica|type=polypeptide|length=248bp
CEVDRLIKNIKNGTTDMNWDSICLNLAGAGGPVVCRPSTILMLWNYDCNI
VKQLNQSQILAKVNDDTALQTLTGKINLDLLLGSIVRSNGDITGASATKM
TYFLKNQEVYVESQGKNVDQKGEDWETEFSDVFIKQKVTGGFDKVYIFSF
VSQQDESGGQISDDLKFLFVGYVLIIAYLGIMLGSFSRLDQKVWLALCGV
LNIGLAIGIAYGLSSAFQLFSTPVHSVLPFLLLGMFHYKYSVSQKKSG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045554XLOC_045554Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073408TCONS_00073408Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000731SSD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1640.10coord: 105..236
e-value: 1.3E-12
score: 46.9
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 144..235
IPR000731Sterol-sensing domainPFAMPF12349Sterol-sensingcoord: 190..235
e-value: 6.4E-7
score: 29.2
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 164..235
score: 10.546

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073408-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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