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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073377 ID=TCONS_00073377|Name=TCONS_00073377|organism=Clytia hemisphaerica|type=transcript|length=1222bp
TTAGAATGCGCGATATGAGTTACCTGAGGAAACCCAGGGCAAAAGCACAT
AACATGGCGGGGAAATGGCCGGGAAATAAGGGGGTCAATCTTATGGTTGG
CGTTTCTTTTTCTGCTTTGTTTCAGTGGTTTTAAgtcaatgttttttgtt
ttttttaaagatatatgatagtaattggttatcgaagtaatcaattgatt
attgaagttattgaaattaatcaataacaatcaaagtgcTCGAACANTGT
TTCAGTGGTTTTAAgtcaatgttttttgttttttttaaagatatatgata
gtaattggttatcgaagtaatcaattgaTTATTGAAGTTATTGAAATTAA
TGAATAACAATCAAAGTGCTCAAACAGTTATCAAGTCTtcgaagggttgt
taagaaagtgatcgaatactcacattttttttgaaattttgatactcAAA
TTTgattgttaatcgataagtggtcgccaataatcagatttattgatatt
ggctttttggcaaaaatattttcagggtcttataatatcatgaatagaat
gAACACACTAAAATTTGAGAGGATTTTGTTCAGCGAAATTTAAGAAAAGC
TCCAAAAATTGACTTTCCCTAAGGAAACCCCTAGTAAGCAAATACAAGTt
ggtttacctccagagaccaaacaaTGGAGAGCAACAAAATAATGCACACa
ctttttttgagaattatGGGAAAGGTGTACTGATaaacaaaaatcacaat
cgaatAAATGAAATGTAATTGAACACTATTGAATGATTGCttttcgattg
tcaaacgcaattgCATCTCAATCAAATGGTCAATTCCTAGGTACTGTTAC
AGCCTTTCTAATTCAGATTTATTTGTGTTGGCAAAAAATTCTgggtaagt
aagtaagtaagtactTTAACGTCATCAAAAGCCAAATTTACGTTTCGTCA
GCGTTCATGTTAGTTGGTCTTATGAAACATCCCTCATTTCATTCTGACAC
CATTCTTTGGAGCTGGGAATAATAGGAAGGGTTAGAAAAAATGCCTCcag
gaggggtgtttatttgtAACAAGTGGCTGTAAAGGGGTAGCATCATCAGT
GTAGCTCGACCTCTTCAAAATACTTGGTAAGAAAAAGCTATACCAATTTG
AAAAACCCTAACCGTTGATCATGTACCAAACCTTTGCCAAACACACAAAA
AACCCGCAATCTAGTTTTCAAC Run BLAST on NCBI transcript from alignment at scaffold_90:250641..251862 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073377 ID=TCONS_00073377|Name=TCONS_00073377|organism=Clytia hemisphaerica|type=transcript|length=1222bp|location=Sequence derived from alignment at scaffold_90:250641..251862 (Clytia hemisphaerica)
GTTGAAAACTAGATTGCGGGTTTTTTGTGTGTTTGGCAAAGGTTTGGTAC
ATGATCAACGGTTAGGGTTTTTCAAATTGGTATAGCTTTTTCTTACCAAG
TATTTTGAAGAGGTCGAGCTACACTGATGATGCTACCCCTTTACAGCCAC
TTGTTacaaataaacacccctcctgGAGGCATTTTTTCTAACCCTTCCTA
TTATTCCCAGCTCCAAAGAATGGTGTCAGAATGAAATGAGGGATGTTTCA
TAAGACCAACTAACATGAACGCTGACGAAACGTAAATTTGGCTTTTGATG
ACGTTAAagtacttacttacttacttacccAGAATTTTTTGCCAACACAA
ATAAATCTGAATTAGAAAGGCTGTAACAGTACCTAGGAATTGACCATTTG
ATTGAGATGcaattgcgtttgacaatcgaaaaGCAATCATTCAATAGTGT
TCAATTACATTTCATTTattcgattgtgatttttgtttATCAGTACACCT
TTCCCataattctcaaaaaaagtGTGTGCATTATTTTGTTGCTCTCCAtt
gtttggtctctggaggtaaaccaACTTGTATTTGCTTACTAGGGGTTTCC
TTAGGGAAAGTCAATTTTTGGAGCTTTTCTTAAATTTCGCTGAACAAAAT
CCTCTCAAATTTTAGTGTGTTcattctattcatgatattataagaccctg
aaaatatttttgccaaaaagccaatatcaataaatctgattattggcgac
cacttatcgattaacaatcAAATTTgagtatcaaaatttcaaaaaaaatg
tgagtattcgatcactttcttaacaacccttcgaAGACTTGATAACTGTT
TGAGCACTTTGATTGTTATTCATTAATTTCAATAACTTCAATAAtcaatt
gattacttcgataaccaattactatcatatatctttaaaaaaaacaaaaa
acattgacTTAAAACCACTGAAACANTGTTCGAgcactttgattgttatt
gattaatttcaataacttcaataatcaattgattacttcgataaccaatt
actatcatatatctttaaaaaaaacaaaaaacattgacTTAAAACCACTG
AAACAAAGCAGAAAAAGAAACGCCAACCATAAGATTGACCCCCTTATTTC
CCGGCCATTTCCCCGCCATGTTATGTGCTTTTGCCCTGGGTTTCCTCAGG
TAACTCATATCGCGCATTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073377-exon-scaffold_90-1491911889:250641..251862 | TCONS_00073377-exon-scaffold_90-1491911889:250641..251862 | Clytia hemisphaerica | exon |
| TCONS_00073377-exon-scaffold_90-1510915933:250641..251862 | TCONS_00073377-exon-scaffold_90-1510915933:250641..251862 | Clytia hemisphaerica | exon |
| TCONS_00073377-exon-scaffold_90-1575043694:250641..251862 | TCONS_00073377-exon-scaffold_90-1575043694:250641..251862 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_90 | supercontig | scaffold_90:250641..251862 . |
Blast
The following BLAST results are available for this feature:
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