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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073331 ID=TCONS_00073331|Name=TCONS_00073331|organism=Clytia hemisphaerica|type=transcript|length=925bp
ATTTCTTCTTCTGGTAATAAGGAACAGAGGATCAGTTGCTAGAATTATTT
CTTTcatgataaaataaaaatttcttcctccatgtttcactgatttttgt
atTCCATTTTCCAACAATGCTGAGATAGCTTCATACCAATCCTTGTACGA
AGTGAAAAGATTTGATCCTGTTTCTTTGCCAAGAAAGTACTTATTAGCAC
CCCAGAGCAGTTTATCTTCTTTGTTAGTAGCGGATGATGGTAGCTGCACA
ATTGGCAAACTTCCAGGCAACGGATCTTTCTTTAACTCATTTTCATTATT
GGCTTCCAttaattcgattttttgacgaaGAGCTTGTATTGCcaattctt
tttctctttccatCTGCCCTAGTTTAATCTCATTGTTTTTCTCTAAGTCC
TTCATCTTCAATGCGAACTCATTTTCCTTGGCAGCCATTTTGGTTTGGTA
ATCATGCTCTTTCACCAGAAATGCTTTCTCCATTTCATTGATTTTCGCCT
tgcattcattttccttggcaGCGACTTCCTTGTCTTTTTCAGCTAGTTTG
TTCTGCAACTCATTCTGCTGTTTCAGCATTTCTTGATTAACTACACCTTT
GTGTGAGTCCAACTCATTCGTTTTCTTTAACTTCATGAGTTCCAGGTCAT
GAGTTAAAGATTGATTGTCCTTTTCAAGCtgcaaaatcttcattttttgc
tCTTTGTCTTGGTTGGACATTTCTTTCTCCAATTCAAGAATTTTGATGCG
ATTTTCAAATATCATATTTTGAATCTGATTGCCATGGTCATCTTTAAGTT
TTGCGCATTCACTGCTGTTGTCAACTTTGTTGGTGGCATTTCTACCAGTA
GCACTGTGTGCCAAATTGTGATCATCAAAGTGTGCAGAATCcattttttc
gtttcttttttgGTCTACATGAGAA Run BLAST on NCBI protein sequence of TCONS_00073331-protein >TCONS_00073331-protein ID=TCONS_00073331-protein|Name=TCONS_00073331-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
SHVDQKRNEKMDSAHFDDHNLAHSATGRNATNKVDNSSECAKLKDDHGNQ
IQNMIFENRIKILELEKEMSNQDKEQKMKILQLEKDNQSLTHDLELMKLK
KTNELDSHKGVVNQEMLKQQNELQNKLAEKDKEVAAKENECKAKINEMEK
AFLVKEHDYQTKMAAKENEFALKMKDLEKNNEIKLGQMEREKELAIQALR
QKIELMEANNENELKKDPLPGSLPIVQLPSSATNKEDKLLWGANKYFLGK
ETGSNLFTSYKDWYEAISALLENGIQKSVKHGGRNFYFIMKEIILATDPL
FLITRRRN Run BLAST on NCBI transcript from alignment at scaffold_9:69911..70835 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073331 ID=TCONS_00073331|Name=TCONS_00073331|organism=Clytia hemisphaerica|type=transcript|length=925bp|location=Sequence derived from alignment at scaffold_9:69911..70835 (Clytia hemisphaerica)
TTCTCATGTAGACcaaaaaagaaacgaaaaaatgGATTCTGCACACTTTG
ATGATCACAATTTGGCACACAGTGCTACTGGTAGAAATGCCACCAACAAA
GTTGACAACAGCAGTGAATGCGCAAAACTTAAAGATGACCATGGCAATCA
GATTCAAAATATGATATTTGAAAATCGCATCAAAATTCTTGAATTGGAGA
AAGAAATGTCCAACCAAGACAAAGagcaaaaaatgaagattttgcaGCTT
GAAAAGGACAATCAATCTTTAACTCATGACCTGGAACTCATGAAGTTAAA
GAAAACGAATGAGTTGGACTCACACAAAGGTGTAGTTAATCAAGAAATGC
TGAAACAGCAGAATGAGTTGCAGAACAAACTAGCTGAAAAAGACAAGGAA
GTCGCtgccaaggaaaatgaatgcaAGGCGAAAATCAATGAAATGGAGAA
AGCATTTCTGGTGAAAGAGCATGATTACCAAACCAAAATGGCTGCCAAGG
AAAATGAGTTCGCATTGAAGATGAAGGACTTAGAGAAAAACAATGAGATT
AAACTAGGGCAGatggaaagagaaaaagaattgGCAATACAAGCTCttcg
tcaaaaaatcgaattaaTGGAAGCCAATAATGAAAATGAGTTAAAGAAAG
ATCCGTTGCCTGGAAGTTTGCCAATTGTGCAGCTACCATCATCCGCTACT
AACAAAGAAGATAAACTGCTCTGGGGTGCTAATAAGTACTTTCTTGGCAA
AGAAACAGGATCAAATCTTTTCACTTCGTACAAGGATTGGTATGAAGCTA
TCTCAGCATTGTTGGAAAATGGAatacaaaaatcagtgaaacatggagga
agaaatttttattttatcatgAAAGAAATAATTCTAGCAACTGATCCTCT
GTTCCTTATTACCAGAAGAAGAAAT Coding sequence (CDS) from alignment at scaffold_9:69911..70835 >TCONS_00073331 ID=TCONS_00073331|Name=TCONS_00073331|organism=Clytia hemisphaerica|type=CDS|length=924bp|location=Sequence derived from alignment at scaffold_9:69911..70835 (Clytia hemisphaerica)
TCTCATGTAGACcaaaaaagaaacgaaaaaatgGATTCTGCACACTTTGA
TGATCACAATTTGGCACACAGTGCTACTGGTAGAAATGCCACCAACAAAG
TTGACAACAGCAGTGAATGCGCAAAACTTAAAGATGACCATGGCAATCAG
ATTCAAAATATGATATTTGAAAATCGCATCAAAATTCTTGAATTGGAGAA
AGAAATGTCCAACCAAGACAAAGagcaaaaaatgaagattttgcaGCTTG
AAAAGGACAATCAATCTTTAACTCATGACCTGGAACTCATGAAGTTAAAG
AAAACGAATGAGTTGGACTCACACAAAGGTGTAGTTAATCAAGAAATGCT
GAAACAGCAGAATGAGTTGCAGAACAAACTAGCTGAAAAAGACAAGGAAG
TCGCtgccaaggaaaatgaatgcaAGGCGAAAATCAATGAAATGGAGAAA
GCATTTCTGGTGAAAGAGCATGATTACCAAACCAAAATGGCTGCCAAGGA
AAATGAGTTCGCATTGAAGATGAAGGACTTAGAGAAAAACAATGAGATTA
AACTAGGGCAGatggaaagagaaaaagaattgGCAATACAAGCTCttcgt
caaaaaatcgaattaaTGGAAGCCAATAATGAAAATGAGTTAAAGAAAGA
TCCGTTGCCTGGAAGTTTGCCAATTGTGCAGCTACCATCATCCGCTACTA
ACAAAGAAGATAAACTGCTCTGGGGTGCTAATAAGTACTTTCTTGGCAAA
GAAACAGGATCAAATCTTTTCACTTCGTACAAGGATTGGTATGAAGCTAT
CTCAGCATTGTTGGAAAATGGAatacaaaaatcagtgaaacatggaggaa
gaaatttttattttatcatgAAAGAAATAATTCTAGCAACTGATCCTCTG
TTCCTTATTACCAGAAGAAGAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073331-exon-scaffold_9-1491911889:69911..70835 | TCONS_00073331-exon-scaffold_9-1491911889:69911..70835 | Clytia hemisphaerica | exon |
| TCONS_00073331-exon-scaffold_9-1510915933:69911..70835 | TCONS_00073331-exon-scaffold_9-1510915933:69911..70835 | Clytia hemisphaerica | exon |
| TCONS_00073331-exon-scaffold_9-1575043694:69911..70835 | TCONS_00073331-exon-scaffold_9-1575043694:69911..70835 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:69911..70835 . |
Blast
The following BLAST results are available for this feature:
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