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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073328 ID=TCONS_00073328|Name=TCONS_00073328|organism=Clytia hemisphaerica|type=transcript|length=1451bp
ATTTCAtcttttactcattttttgtgATGAGTGCACGGtgtatgacgtca
taaacaaaTTGTGTCAGGAATTGCGTTAAACAGGGCAACATCATTGCTTT
GTTTCGAAAACGGTGGCAGATACCACTGTAAAAAAACTGCCATCAGCAAG
TGAACATATAGTTGACCCTCGCTAACCTAAAATTTGGTGGGGGATCTAGT
TTCGACATACAGAGAGATTTAAATCATAGAAAATCCATCAAGGTTCCGGG
CCATGAcaaagaattattttgaatttgtagaAGGGATCGAATGCCAACTC
TGGTTTCTTTCGGATCTTTCGCAGACTACATTAGCCAATATAGAGCTACT
TTTTTTGAAACGATTCGGAAAAAACGAtttaaagtgctgatttactgtCG
TCCTCAATCattcaggatctagacaaataaAGTCGCTaccggtaaggttc
taattggACTGTATCCTGACCAATNTAGCCGTCTTCGCCACAGGACAAAC
TCCATACATAAAGTCGCTaccggtaaggttctaattggACTATATCCTGA
CCAATTGTGGACGACATTTTAGGGGTTAGAAGTGCGAATTATTccaaata
cataaacttgccACTATTAATGTGACGCAGAGGTAAACACATGTACGACT
CATTCATTTTGAGTTTTCACGCTAAAATATCTTCATATTTTCACAGATTG
TGAATGGTTCAAAGGATAGGAAGTGTTCCAACTCCTTCCTGCACTTCCGT
CATTCGAGATGTTGAATAGCACAAGTACAACTTTTGAACTTCTGGTTCAA
TGATGGTCGTCTCCAGTGGTGTATTCGCAGAACTTGCTTCGTGGACACAC
TACGTGGTCACTTTCTCTCGTCTGGGAAGGCCATGTCTCATCAACGAGAG
CCTATGCTGCTGtactttcaaatttcaattttattttttcggtAGCTGCA
TAAAAAATCATCAGTGTAACCAGAGCTCTCTTATAAGAAGCAGCAAACTT
TTTTGAGGCttagctgttcttattttttggcactatGAACCTTAAGATAT
TCTGATCCTGCTCTTGTTTTAGGGAAAGATTTAAATAtcattcttcttaa
tttgttcttaacatttgaCGCTTTAAAGTTTCATTGTTGTATTGAAACAT
AAGGAGTGCATTCAGATTGGATTTCCCCGAGTTCTCGTTAAGTTTATTTT
AGGTGTTTTAAAAtccattttgtttttctgactattttattttttataag
atttctAAGATTTACCCAGATGAAACATGTAGCAAATTTAACCAGATTTT
ATTTATATagatattttataattttaattcCTATTATTTTATTGACAGAG
TATAAGATTTTacgagatttttatttttttgaattttggattgAAATTTT
TAGTTTATAAATAAGTATAGAAAATAtctattgattttgatttatgAATT
C Run BLAST on NCBI transcript from alignment at scaffold_9:13057..14507 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073328 ID=TCONS_00073328|Name=TCONS_00073328|organism=Clytia hemisphaerica|type=transcript|length=1451bp|location=Sequence derived from alignment at scaffold_9:13057..14507 (Clytia hemisphaerica)
GAATTcataaatcaaaatcaatagaTATTTTCTATACTTATTTATAAACT
AAAAATTTcaatccaaaattcaaaaaaataaaaatctcgtAAAATCTTAT
ACTCTGTCAATAAAATAATAGgaattaaaattataaaatatctATATAAA
TAAAATCTGGTTAAATTTGCTACATGTTTCATCTGGGTAAATCTTagaaa
tcttataaaaaataaaatagtcagaaaaacaaaatggaTTTTAAAACACC
TAAAATAAACTTAACGAGAACTCGGGGAAATCCAATCTGAATGCACTCCT
TATGTTTCAATACAACAATGAAACTTTAAAGCGtcaaatgttaagaacaa
attaagaagaatgaTATTTAAATCTTTCCCTAAAACAAGAGCAGGATCAG
AATATCTTAAGGTTCatagtgccaaaaaataagaacagctaaGCCTCAAA
AAAGTTTGCTGCTTCTTATAAGAGAGCTCTGGTTACACTGATGATTTTTT
ATGCAGCTaccgaaaaaataaaattgaaatttgaaagtaCAGCAGCATAG
GCTCTCGTTGATGAGACATGGCCTTCCCAGACGAGAGAAAGTGACCACGT
AGTGTGTCCACGAAGCAAGTTCTGCGAATACACCACTGGAGACGACCATC
ATTGAACCAGAAGTTCAAAAGTTGTACTTGTGCTATTCAACATCTCGAAT
GACGGAAGTGCAGGAAGGAGTTGGAACACTTCCTATCCTTTGAACCATTC
ACAATCTGTGAAAATATGAAGATATTTTAGCGTGAAAACTCAAAATGAAT
GAGTCGTACATGTGTTTACCTCTGCGTCACATTAATAGTggcaagtttat
gtatttggAATAATTCGCACTTCTAACCCCTAAAATGTCGTCCACAATTG
GTCAGGATATAGTccaattagaaccttaccggtAGCGACTTTATGTATGG
AGTTTGTCCTGTGGCGAAGACGGCTANATTGGTCAGGATACAGTccaatt
agaaccttaccggtAGCGACTttatttgtctagatcctgaatGATTGAGG
ACGacagtaaatcagcactttaaaTCGTTTTTTCCGAATCGTTTCAAAAA
AAGTAGCTCTATATTGGCTAATGTAGTCTGCGAAAGATCCGAAAGAAACC
AGAGTTGGCATTCGATCCCTtctacaaattcaaaataattctttgTCATG
GCCCGGAACCTTGATGGATTTTCTATGATTTAAATCTCTCTGTATGTCGA
AACTAGATCCCCCACCAAATTTTAGGTTAGCGAGGGTCAACTATATGTTC
ACTTGCTGATGGCAGTTTTTTTACAGTGGTATCTGCCACCGTTTTCGAAA
CAAAGCAATGATGTTGCCCTGTTTAACGCAATTCCTGACACAAtttgttt
atgacgtcatacaCCGTGCACTCATcacaaaaaatgagtaaaagaTGAAA
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073328-exon-scaffold_9-1491911889:13057..14507 | TCONS_00073328-exon-scaffold_9-1491911889:13057..14507 | Clytia hemisphaerica | exon |
| TCONS_00073328-exon-scaffold_9-1510915933:13057..14507 | TCONS_00073328-exon-scaffold_9-1510915933:13057..14507 | Clytia hemisphaerica | exon |
| TCONS_00073328-exon-scaffold_9-1575043694:13057..14507 | TCONS_00073328-exon-scaffold_9-1575043694:13057..14507 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:13057..14507 . |
Blast
The following BLAST results are available for this feature:
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