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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073283 ID=TCONS_00073283|Name=TCONS_00073283|organism=Clytia hemisphaerica|type=transcript|length=889bp
agaAGACTGGGATTTTTTTAAGGtggtaaaacaaacaaaaaaattcccgC
GTAGCAATATTGGCGGCTACGGCCGAAAAGGCGTATCAAGAACCCTCTGA
TagtcaaaatatttgattcgtTTATGGTATTACTGTGAAGGGTATAATCA
TGGACGAAAATGGCGAGACAAGAATATAAAGCTTCACTCCCTCTCTCCAC
CAGAGGCAATGTTGAAGGGCAGTGGAAATGTCGGTGGGACGGCCATTCGC
ATTCAACATTTCCGCTTGGGGAAAAACTCGggggaaagggggggggggac
ttttCCATAGTTTTCCTAGCATTTTCCtgtgtttttctcaaacattaaaC
TCTAAGCTTTTCCAAATCAAAAAAAGGGAATATCGCAAAAAGTATTGTTG
ctattgatttttaaaaacccGAAAAggttcttattggtcaagcaccgaaa
ttctattgtaatgtcacgtgaccaaGGAAGGGTTTCCTACcgaaccacgg
cacacttttcagccaaagcactatatctagctcttcgggctttacagaaa
tctgtggtaTTGACGTAGAAAGATATCATGTACTAGAATTACAGATCCCA
TGAAATAGACTAATGATGTACCATATTAACGTTCGCTTATCATTTAGCCT
TCACTGAGTAGAATTTTGATGTCAAACTTCTTAAGAGCTTATACAATAAA
AAATAGTCTGATGTTTTGAGCCTTTGCAAAGATAGAAGAAGATTAGGAGG
GTTATGTTTCATTCAATGGTGCTCTTGGCTCATTATCATCAAACCATTTA
AATTCTCAGCAAAGAAAAATTGACATTGTAggacaaattttattgaattt
atttgTCTGACATTTTGACAGAGctgaaacaattttttg Run BLAST on NCBI transcript from alignment at scaffold_89:191100..191988 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073283 ID=TCONS_00073283|Name=TCONS_00073283|organism=Clytia hemisphaerica|type=transcript|length=889bp|location=Sequence derived from alignment at scaffold_89:191100..191988 (Clytia hemisphaerica)
caaaaaattgtttcagCTCTGTCAAAATGTCAGAcaaataaattcaataa
aatttgtccTACAATGTCAATTTTTCTTTGCTGAGAATTTAAATGGTTTG
ATGATAATGAGCCAAGAGCACCATTGAATGAAACATAACCCTCCTAATCT
TCTTCTATCTTTGCAAAGGCTCAAAACATCAGACTATTTTTTATTGTATA
AGCTCTTAAGAAGTTTGACATCAAAATTCTACTCAGTGAAGGCTAAATGA
TAAGCGAACGTTAATATGGTACATCATTAGTCTATTTCATGGGATCTGTA
ATTCTAGTACATGATATCTTTCTACGTCAAtaccacagatttctgtaaag
cccgaagagctagatatagtgctttggctgaaaagtgtgccgtggttcgG
TAGGAAACCCTTCCttggtcacgtgacattacaatagaatttcggtgctt
gaccaataagaaccTTTTCgggtttttaaaaatcaatagCAACAATACTT
TTTGCGATATTCCCTTTTTTTGATTTGGAAAAGCTTAGAGtttaatgttt
gagaaaaacacaGGAAAATGCTAGGAAAACTATGGaaaagtccccccccc
cctttccccCGAGTTTTTCCCCAAGCGGAAATGTTGAATGCGAATGGCCG
TCCCACCGACATTTCCACTGCCCTTCAACATTGCCTCTGGTGGAGAGAGG
GAGTGAAGCTTTATATTCTTGTCTCGCCATTTTCGTCCATGATTATACCC
TTCACAGTAATACCATAAacgaatcaaatattttgactATCAGAGGGTTC
TTGATACGCCTTTTCGGCCGTAGCCGCCAATATTGCTACGcgggaatttt
tttgtttgttttaccaCCTTAAAAAAATCCCAGTCTtct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073283-exon-scaffold_89-1491911889:191100..191988 | TCONS_00073283-exon-scaffold_89-1491911889:191100..191988 | Clytia hemisphaerica | exon |
| TCONS_00073283-exon-scaffold_89-1510915933:191100..191988 | TCONS_00073283-exon-scaffold_89-1510915933:191100..191988 | Clytia hemisphaerica | exon |
| TCONS_00073283-exon-scaffold_89-1575043694:191100..191988 | TCONS_00073283-exon-scaffold_89-1575043694:191100..191988 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_89 | supercontig | scaffold_89:191100..191988 . |
Blast
The following BLAST results are available for this feature:
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