TCONS_00073249 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073249
Unique NameTCONS_00073249
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2056

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073249 ID=TCONS_00073249|Name=TCONS_00073249|organism=Clytia hemisphaerica|type=transcript|length=2056bp
TGGCGCTCGTATTTAttatcattttgttttgatcaaGTCGCACTTGTTTG
CTGTATGCAAACAATGAAACAAACATTCAAACCTTTATTATTCGGTATTT
CCATGCTTATTGGTGCgttaaaaattcaaagaatttgtAAACCTTTTCGA
CTTGATTTTGCTTTGAAATCAATAaatcttttggttattttgctGTTGGT
TTTATATTTCTTCATACTGATGGTACTAAAGCAAGAATGACAActaaaag
aattttatttttccattttctacTGACGCTAATCGTATCTTCGGATTGTG
TTAATAATCCTACATTTAACCCAACAAGATGTTATAATGTCCACGTGGAT
GATTTTCGAGCATTCGTCCGAGGTATTTGGGATGCCGATGCACCGTACCG
AATCAATCCGAATGGAAATAACCAGNtttcattttccccggccgtttcct
agtcaaatcctcataaaaaagtactaaaaggcggacactcaattagcgga
ccttctgattagcggaccctctgattagcggaccaATTTCTTCGCACGAA
TTGGCCAAAACCCccattttagctctccaattagcaaacattgaatatca
aacggacacagacgtccaaaatcgaaaaaaaaaaataggtattttcattt
caagcacctattagtcttattattcaaaNTCAACCACTAAACGATCCTAA
TTTGCAGCATTTCTTCACGAACCCCATTGCTGATGATCGATTTAACAATG
TAATATACCAATCATTTGCACCTTTGGTTGCTGAAGACACAGAGGACGAC
CAACAAGCCCATCTCTTTATCACTTCTATTATTGCATCAGATGTCGGTCA
ACGAGCTATCCAACTCATGCCAGGAATGACTGAACAAAATTTCCGCGCTG
GTATTTATTTACTCTTCTTTGGCGATGATTGGCATATTTTTAAACATGTG
TTTCGTGGCGAGagaaaaacgaaagtgaaccGCGGTAGAACTACCAGGAC
ACTGACAGGTTATCATAATTGGTACAAGTTTTACACGGATGAGCGAGCTA
ATAATATCGAGTACCTAGGTTCTAAAGATAACAATATGGTTCAACTTCTC
CAAACCAGAAATGACAGACATttcTTCCTGGGCAAATATAGAACGAGAGC
AGCGCCACAATTTACCAAAAGTACTGGCACCTTCTTTATTGGTACATCTC
CTGCTTTCGAAGTGGTCTTATATTACTATGTCCACGTTCATGGTTGTTGG
GGAATTCCCTTCTTCTTAACACCAGCATTAGCAGCTCAACCAGGGGAACG
AGCATGCATTGCAGGTTTCTATCAAAACCAATGGGGACAGCATCCTCCAA
CCTGTTTCCCCGTTGTTGAAACGGAGCAAGACAGTTGTAAAGACCACCAA
ATGACGCTTCCACCTGGTGCTGCTTTACCGCCCTTGATGACCACTACCAC
CACAACCCCACACCCTGCCACCACCTCCCCATCTACAACCACCATCAACC
CGCCTGAACCACCAAAGGAAGATGGtgttggaaaatattttcaactggTT
TATAAAAGTATCGAAAGTTTTTTAGAAAGAGCTAAATTATTTTCCAGCGa
agttcttaagaaattggTGGAGCCAATGaagaaatttgaagatgaaATTC
ACACAGAAGATGACGTTGCCAAAGATAACGGTGATGATTCAAAGGGCGGT
GAAGGTGATTCGAAGGGTGGTAATGGAGATCCGCCCCCTGATGCCACGTC
TTCAAGGAGTGAAACAAGTGGTTATGAAGAAGGAGTAGAGCAAGCTCAAT
AATTTGTCGAACATATCATAAACCAGCTATTATATAATTCAATATAATAA
CAAAATCCAATATGGCTCGCATGTAAAGATCggatattttgcatttttga
gtCTCTCTAAGAAGGCTACGAAAACCAGCAAGAAGTTAAAACAAAATTCC
TCTCAGTAACATTTTGCTGTAAACTTTATTTTATCCGTTTATGTCATggt
attttttattaatttttaaaataattattaGTAATCACATATCTACAAAA
TTCTCG
Run BLAST on NCBI

protein sequence of TCONS_00073249-protein

>TCONS_00073249-protein ID=TCONS_00073249-protein|Name=TCONS_00073249-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
MPGMTEQNFRAGIYLLFFGDDWHIFKHVFRGERKTKVNRGRTTRTLTGYH
NWYKFYTDERANNIEYLGSKDNNMVQLLQTRNDRHFFLGKYRTRAAPQFT
KSTGTFFIGTSPAFEVVLYYYVHVHGCWGIPFFLTPALAAQPGERACIAG
FYQNQWGQHPPTCFPVVETEQDSCKDHQMTLPPGAALPPLMTTTTTTPHP
ATTSPSTTTINPPEPPKEDGVGKYFQLVYKSIESFLERAKLFSSEVLKKL
VEPMKKFEDEIHTEDDVAKDNGDDSKGGEGDSKGGNGDPPPDATSSRSET
SGYEEGVEQAQ
Run BLAST on NCBI

transcript from alignment at scaffold_89:59503..67686+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073249 ID=TCONS_00073249|Name=TCONS_00073249|organism=Clytia hemisphaerica|type=transcript|length=8184bp|location=Sequence derived from alignment at scaffold_89:59503..67686+ (Clytia hemisphaerica)
TGGCGCTCGTATTTAttatcattttgttttgatcaaGTCGCACTTGTTTG CTGTATGCAAACAATGAAACAAACATTCAAACCTTTATTATTCGGTATTT CCATGCTTATTGGTGCgttaaaaattcaaagaatttgtAAACCTTTTCGA CTTGATTTTGCTTTGAAATCAATAaatcttttggttattttgctGTTGGT TTTATATTTCTTCATACTGATGGTACTAAAGCAAGAATGACAActaaaag aattttatttttccattttctacTGACGCTAATCGTATCTTCGGGTAAgc atttcattttccttttgatgatctatttttttatatagaaaCATAAGGCT AAAATCCTTAGTTTGATTCTAAGAGGCAATACAGTAGTTTAAAAGTCTAC AGGAGAGGATTTTGGCTTCATAAACATGTTTTACTTTGACCTTTGATTGT CTTAAATTCATTACAGTCATTCCAGGCTTAGCCTTGttctgaaattgttc ttatttttggcccTTTTGTGCCTTAttgcagtagcgtagccaagaggggt gCAAAATCTGtttaggagagcagatttttacgtcactgtaattatctatt atgaataaaataaataattacaatatcgtaaaaatctgctctcctacaca aattttgcgcccaaGAGGGGCTACtgttattgttcttataaaattgtttt tatgatACTGTAGTAGAGTGTACTTTACGAAAGATTTCAAGTTGGAGAAC ATTTAAGAATAATTTAGCCTTGAAGTAACAAAGGGATCAGACCAGGCCTG ATAAAAAAAAGTTCGTTTTATAGCATAACGCACGTCGAATCTAACAAATC TgcacaaaattttcatttctacGAATTTTCGAtcctttgcattaattgct CTTGTACGTTAATTAAttacaatatcaaaagaaagggGTAATAAAGTTTT ACGGTTTTCCCATCATTTCGAAATGAACTGTGGAATTGGATCATTTTTCG TTGAAATAATTATGACGCGTGAGATtcatttatgtttttttctctttatt ttatAGATTGTGTTAATAATCCTACATTTAACCCAACAAGATGTTATAAT GTCCACGTGGAGTAAGTTTTTATTACGTTCTATTGTATTATAGCCGACtt ctatacagggtgtccctaattaagtatcgagtcgaaacacaactNgacag aaaatacaatggaaaagctattaaaatcgactcactcatgagcaaatgcc aaattacaaatgccagttggtctaaacgcagcctataagtagaaagtttt atgtgcgtgttcacaaaattgtattttaagctctgtctcttttttcttcg tcattacaattaatttatacgttgtaactaccttttgtattaagcctgtg tgatggagaacgttcttatattttagcgataacacacacaaacttttcta ctcaatcgcatgctcaaactcgatactttgattagggacaccctgtatat tttcttacattttgttaaacacacgcaacaatcttctactcagaatcatg tttgaactcgatactttttttccggacaccctgtacaatGACAGTTTTTT CCTCGTTGTTCACTTTCAAGCTTGAgagcaaggatttattatacactgga tatacaagtaacagatttttgccgatttctcgtgtactagctgtgtccgc agtaatgatattattgttcactctcctcccctcattaaatgatttNaaga tatttccaattgaaaatttcgtgtcactataagcattttgtctgaatttc ttgtctagtgatgtttttctcacattagatttcacaaatgtatccagttT GGAATGGTAGCCTTCCtttcaaactttcttttctgcaaatgtacaaaaag aaagagctagagaactttttaaaataagactgataaacatttccaaaaat cagacatcttcgagccgccatgacagttgtcctttgcggacaaaactaga acatcaattgttttctgaaacaattatcgctctccatcgttttatgagtc gtttatccagtgtataataaatcccacagatatctgtaaagcccgaaggg ctagatttgcagctttgttcaaaaagtgaagctcatctttggaaggattt cctactaGAGTCACGTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNcggcacgaaatttaaaaagtcaaatttttgcttca cttttttttgctggagaaagcttaaagttgcaaatctagcccttcgggct tagatatctgtgatAAATCCTTGTTGAGAGAAAACacctttttctataag aacatccaaaattttttaaacttatgaaatttatgattttatgacattta tttcatttaaaggttttgtttttacataggtgtttccgtttcatatcaga cacatatttcatgttacagtaaaacctctaattaagggacactctaaaag gcgcacacctctgattagcggacaatttcattttccccggccgtttccta gtcaaatcctcataaaaaagtactaaaaggcggacactcaattagcggNT ATGTCTTTTgagtatttccctcactttttgtcccatgaaacaaaaaaagg aaCCATGGGACACacacgcgaaaaaaacttttcgagTCCTAAAGCCTTAA CTATTTATCTTTTCAGTGATTTTCGAGCATTCGTCCGAGGTATTTGGGAT GCCGATGCACCGTACCGAATCAATCCGAATGGAAATAACCAGNtttcatt ttccccggccgtttcctagtcaaatcctcataaaaaagtactaaaaggcg gacactcaattagcggaccttctgattagcggaccctctgattagcggac caATTTCTTCGCACGAATTGGCCAAAACCCccattttagctctccaatta gcaaacattgaatatcaaacggacacagacgtccaaaatcgaaaaaaaaa aataggtattttcatttcaagcacctattagtcttattattcaaaNTCAA CCACTAAACGATCCTAATTTGCAGCATTTCTTCACGAACCCCATTGCTGA TGATCGATTTAACAATGTAATATACCAATGTATGTACTCTAAATTCTTTC TAACTCGATCTAACATAGATTCAGAATTTGATGTGATCCGTTTTGAtctg ctttgtaacgtctttttttaacgttttgaaATTTCACATTCACACTTGTT TCTAGCCTGTACCACCCCCGCCCACGGGTGTttcatatattttgaaaaaa actaattgTTTTAAACTGTAATAAACTGAACTTTgcgttatcttttcagt cagcgaaGAAGATTTTGGTACAACCTGATCGTTTCGTTTTGGATTGATAG GccttatataaaaattttgagtaaaaataTAATCGAAATTTATAATATTA CCAAACATCAAGAATGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNTTTGTCCTTTAGCATTTGCACCTTTGGTTGCTG AAGACACAGAGGACGACCAACAAGCCCATCTCTTTATCACTTCTATTATT GCATCAGATGTCGGTCAACGAGCTATCCAACTCATGCCAGGAATGACTGA ACAAAATTTCCGCGCTGGTATTTATTTACTCTTCTTTGGCGATGATTGGC ATATTTTTAAACATGTGTTTCGTGGCGAGagaaaaacgaaagtgaaccGC GGTAGAACTACCAGGACACTGACAGGTTATCATAATTGGTACAAGTTTTA CACGGATGAGCGAGCTAATAATATCGAGTACCTAGGTTCTAAAGATAACA ATATGGTTCAACTTCTCCAAACCAGAAATGACAGACATGTAAGTACTATC TCAAACTAAACAGATTGTCCCAGAGATAAAAAAACACatcaaattttgtt agatcCTCAAAACTTGCTGGTGTgtagaatgggcttttccagaaatagtt ttttcccaccggggacgaaatttttgcccaattttccagtggggctcagt ggcgttgtggggaaatttttctggaggggccaaagtcaatttcttttaaa tgaCGCCCCCCCCCTCCCAAAGTGATATCCCCACCCaccattttctaaac ttttactaattcatttgcctaggcataatgaggaaggaaatatttagtgg agaagagtagatttatctttgatgaatggaaaaggggACAACAgacccca ccatggttggggccgactagaaaatctttttaaatcgactgccaagaatc taaatcactaaataaaaatagacaaatttgacacttgctagattgaaaag aaacttaaagaaacaatgtgtaatgcgagcaaagcgagcgaaaaaattga tgttttatgatttcaatattgctgtcagcaaattggtcttggggcgcagt tagattttcatttaataacaGGGAGGTTAACtaagtatcaaagataaatc aacgagacgaacggacgggttttgacccgcaacctgcagtaaacatgtgg aactgcattttctagaatccaggctaaaacaGCTCAAGAACGAAAAACCG TGAAAATCTTCGTTGTTGAACAAAGAAGATATAACATCTACTTTGCTAAT CTTACCATCTTGCAGAGAAAAGGTCCGTtagatttatctttgatacGTAA ACTCcctaatgctatattgtacacaaaaaacttgtaaatcagctagattg caaagaagtaaCCATTTAACTGTATTGTGAGCGAAGCgggcgaaaaaaat tgcaagtattttaaaattatctcagtaaaattagTCCTGGacgcaattta aggcgcataaagtatgatttttaagattggggtgtttaaaaaaatctttt ttggcaccccttgctcttcggcgccccttcaaaaaagctccgctgggggg gccatGCCCCagccccccctgccacaacgccactggtgGGGCTGGgttcc cagcgggtctgtgttATGATATACATGATATAGTCAAACACTGTGAATAT CACGGTCTCAATTACAGATCTCATAAAGTGCTTTGAACCTTTGGTTTTTC ATGACTGGACCTTATAGAAGAGAGGAGGGGGTAATTCTCAAGTTACATTT TTGGGAAGGATCATCTCAATAGCATTTTATAATTACAGCCactaattttt caaagagtatTAGGAGAAATCACCCCATTTGATGGCCAAATTAtcaagaa caagctaagaacatttttagtcttaaaacttaaaacgttaaaaacatccg aaggcttcaaaaatcttcgattttcttataaaaaaacatgtaatgacCCC CATCAAATTTTTAGGAATATCTTTTAGAGTGCCAACTCCGATTTGCTTAT CCCAAGTCGTCTCTCTTGTTTTTTATAGTTCTTCCTGGGANCTTCTAGAG TGCCAACTCCATTTGCTTATCCCAAGTCgtctcttttgtttttttatagt tcTTCCTGGGCAAATATAGAACGAGAGCAGCGCCACAATTTACCAAAAGT ACTGGCACCTTCTTTATTGGTACATCTCCTGCTTTCGAAGTGGTCTTATA TTACTATGTCCACGTTCATGGTTGTTGGGGAATTCCCTTCTTCTTAACAC CAGCATTAGCAGCTCAACCAGGGGAACGAGCATGCATTGCAGGTTTCTAT CAAAACCAATGGGGACAGCATCCTCCAACCTGTTTCCCCGTTGTTGAAAC GGAGCAAGACAGTTGTAAAGACCACCAAATGACGCTTCCACCTGGTGCTG CTTTACCGCCCTTGATGACCACTACCACCACAACCCCACACCCTGCCACC ACCTCCCCATCTACAACCACCATCAACCCGCCTGAACCACCAAAGGAAGA TGGtgttggaaaatattttcaactggTTTATAAAAGTATCGAAAGTTTTT TAGAAAGAGCTAAATTATTTTCCAGCGaagttcttaagaaattggTGGAG CCAATGaagaaatttgaagatgaaATTCACACAGAAGATGACGTTGCCAA AGATAACGGTGATGATTCAAAGGGCGGTGAAGGTGATTCGAAGGGTGGTA ATGGAGATCCGCCCCCTGATGCCACGTCTTCAAGGAGTGAAACAAGTGGT TATGAAGAAGGAGTAGAGCAAGCTCAATAATTTGTCGAACATATCATAAA CCAGCTATTATATAATTCAATATAATAACAAAATCCAATATGGCTCGCAT GTAAAGATCggatattttgcatttttgagtCTCTCTAAGAAGGCTACGAA AACCAGCAAGAAGTTAAAACAAAATTCCTCTCAGTAACATTTTGCTGTAA ACTTTATTTTATCCGTTTATGTCATggtattttttattaatttttaaaat aattattaGTAATCACATATCTACAAAATTCTCG

Coding sequence (CDS) from alignment at scaffold_89:59503..67686+

>TCONS_00073249 ID=TCONS_00073249|Name=TCONS_00073249|organism=Clytia hemisphaerica|type=CDS|length=1872bp|location=Sequence derived from alignment at scaffold_89:59503..67686+ (Clytia hemisphaerica)
ATGCCAGGAATGACTGAACAAAATTTCCGCGCTGGTATTTATTTACTCTT
CTTTGGCGATGATTGGCATATTTTTAAACATGTGTTTCGTGGCGAGagaa
aaacgaaagtgaaccGCGGTAGAACTACCAGGACACTGACAGGTTATCAT
AATTGGTACAAGTTTTACACGGATGAGCGAGCTAATAATATCGAGTACCT
AGGTTCTAAAGATAACAATATGGTTCAACTTCTCCAAACCAGAAATGACA
GACATttcTTCCTGGGCAAATATAGAACGAGAGCAGCGCCACAATTTACC
AAAAGTACTGGCACCTTCTTTATTGGTACATCTCCTGCTTTCGAAGTGGT
CTTATATTACTATGTCCACGTTCATGGTTGTTGGGGAATTCCCTTCTTCT
TAACACCAGCATTAGCAGCTCAACCAGGGGAACGAGCATGCATTGCAGGT
TTCTATCAAAACCAATGGGGACAGCATCCTCCAACCTGTTTCCCCGTTGT
TGAAACGGAGCAAGACAGTTGTAAAGACCACCAAATGACGCTTCCACCTG
GTGCTGCTTTACCGCCCTTGATGACCACTACCACCACAACCCCACACCCT
GCCACCACCTCCCCATCTACAACCACCATCAACCCGCCTGAACCACCAAA
GGAAGATGGtgttggaaaatattttcaactggTTTATAAAAGTATCGAAA
GTTTTTTAGAAAGAGCTAAATTATTTTCCAGCGaagttcttaagaaattg
gTGGAGCCAATGaagaaatttgaagatgaaATTCACACAGAAGATGACGT
TGCCAAAGATAACGGTGATGATTCAAAGGGCGGTGAAGGTGATTCGAAGG
GTGGTAATGGAGATCCGCCCCCTGATGCCACGTCTTCAAGGAGTGAAACA
AGTGGTTATGAAGAAGGAGTAGAGCAAGCTCAATAAATGCCAGGAATGAC
TGAACAAAATTTCCGCGCTGGTATTTATTTACTCTTCTTTGGCGATGATT
GGCATATTTTTAAACATGTGTTTCGTGGCGAGagaaaaacgaaagtgaac
cGCGGTAGAACTACCAGGACACTGACAGGTTATCATAATTGGTACAAGTT
TTACACGGATGAGCGAGCTAATAATATCGAGTACCTAGGTTCTAAAGATA
ACAATATGGTTCAACTTCTCCAAACCAGAAATGACAGACATttcTTCCTG
GGCAAATATAGAACGAGAGCAGCGCCACAATTTACCAAAAGTACTGGCAC
CTTCTTTATTGGTACATCTCCTGCTTTCGAAGTGGTCTTATATTACTATG
TCCACGTTCATGGTTGTTGGGGAATTCCCTTCTTCTTAACACCAGCATTA
GCAGCTCAACCAGGGGAACGAGCATGCATTGCAGGTTTCTATCAAAACCA
ATGGGGACAGCATCCTCCAACCTGTTTCCCCGTTGTTGAAACGGAGCAAG
ACAGTTGTAAAGACCACCAAATGACGCTTCCACCTGGTGCTGCTTTACCG
CCCTTGATGACCACTACCACCACAACCCCACACCCTGCCACCACCTCCCC
ATCTACAACCACCATCAACCCGCCTGAACCACCAAAGGAAGATGGtgttg
gaaaatattttcaactggTTTATAAAAGTATCGAAAGTTTTTTAGAAAGA
GCTAAATTATTTTCCAGCGaagttcttaagaaattggTGGAGCCAATGaa
gaaatttgaagatgaaATTCACACAGAAGATGACGTTGCCAAAGATAACG
GTGATGATTCAAAGGGCGGTGAAGGTGATTCGAAGGGTGGTAATGGAGAT
CCGCCCCCTGATGCCACGTCTTCAAGGAGTGAAACAAGTGGTTATGAAGA
AGGAGTAGAGCAAGCTCAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045443XLOC_045443Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073249-proteinTCONS_00073249-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073249-exon-scaffold_89-1491911889:59503..59796TCONS_00073249-exon-scaffold_89-1491911889:59503..59796Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1510915933:59503..59796TCONS_00073249-exon-scaffold_89-1510915933:59503..59796Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1575043694:59503..59796TCONS_00073249-exon-scaffold_89-1575043694:59503..59796Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1491911889:60559..60613TCONS_00073249-exon-scaffold_89-1491911889:60559..60613Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1510915933:60559..60613TCONS_00073249-exon-scaffold_89-1510915933:60559..60613Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1575043694:60559..60613TCONS_00073249-exon-scaffold_89-1575043694:60559..60613Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1491911889:62419..62831TCONS_00073249-exon-scaffold_89-1491911889:62419..62831Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1510915933:62419..62831TCONS_00073249-exon-scaffold_89-1510915933:62419..62831Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1575043694:62419..62831TCONS_00073249-exon-scaffold_89-1575043694:62419..62831Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1491911889:64782..65140TCONS_00073249-exon-scaffold_89-1491911889:64782..65140Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1510915933:64782..65140TCONS_00073249-exon-scaffold_89-1510915933:64782..65140Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1575043694:64782..65140TCONS_00073249-exon-scaffold_89-1575043694:64782..65140Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1491911889:66752..67686TCONS_00073249-exon-scaffold_89-1491911889:66752..67686Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1510915933:66752..67686TCONS_00073249-exon-scaffold_89-1510915933:66752..67686Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1575043694:66752..67686TCONS_00073249-exon-scaffold_89-1575043694:66752..67686Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_89supercontigscaffold_89:59503..67686 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.595458 0.416824 0.413224 0.44683 27.533 25.5169 371.441 397.409 115.65 93.726 223.934 82.6983 65.6694 59.1497 52.9771 122.031 20.0194 15.6753 0.428491 0.182053 11.4594 12.8462 16.9128 18.7245 18.0701 23.2645 16.6671 5.59051 0.859898 0.977464
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR018998Endoribonuclease_XendoU
Vocabulary: Molecular Function
TermDefinition
GO:0016788hydrolase activity, acting on ester bonds
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073249 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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