TCONS_00073249 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073249
Unique NameTCONS_00073249
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2056

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073249 ID=TCONS_00073249|Name=TCONS_00073249|organism=Clytia hemisphaerica|type=transcript|length=2056bp
TGGCGCTCGTATTTAttatcattttgttttgatcaaGTCGCACTTGTTTG
CTGTATGCAAACAATGAAACAAACATTCAAACCTTTATTATTCGGTATTT
CCATGCTTATTGGTGCgttaaaaattcaaagaatttgtAAACCTTTTCGA
CTTGATTTTGCTTTGAAATCAATAaatcttttggttattttgctGTTGGT
TTTATATTTCTTCATACTGATGGTACTAAAGCAAGAATGACAActaaaag
aattttatttttccattttctacTGACGCTAATCGTATCTTCGGATTGTG
TTAATAATCCTACATTTAACCCAACAAGATGTTATAATGTCCACGTGGAT
GATTTTCGAGCATTCGTCCGAGGTATTTGGGATGCCGATGCACCGTACCG
AATCAATCCGAATGGAAATAACCAGNtttcattttccccggccgtttcct
agtcaaatcctcataaaaaagtactaaaaggcggacactcaattagcgga
ccttctgattagcggaccctctgattagcggaccaATTTCTTCGCACGAA
TTGGCCAAAACCCccattttagctctccaattagcaaacattgaatatca
aacggacacagacgtccaaaatcgaaaaaaaaaaataggtattttcattt
caagcacctattagtcttattattcaaaNTCAACCACTAAACGATCCTAA
TTTGCAGCATTTCTTCACGAACCCCATTGCTGATGATCGATTTAACAATG
TAATATACCAATCATTTGCACCTTTGGTTGCTGAAGACACAGAGGACGAC
CAACAAGCCCATCTCTTTATCACTTCTATTATTGCATCAGATGTCGGTCA
ACGAGCTATCCAACTCATGCCAGGAATGACTGAACAAAATTTCCGCGCTG
GTATTTATTTACTCTTCTTTGGCGATGATTGGCATATTTTTAAACATGTG
TTTCGTGGCGAGagaaaaacgaaagtgaaccGCGGTAGAACTACCAGGAC
ACTGACAGGTTATCATAATTGGTACAAGTTTTACACGGATGAGCGAGCTA
ATAATATCGAGTACCTAGGTTCTAAAGATAACAATATGGTTCAACTTCTC
CAAACCAGAAATGACAGACATttcTTCCTGGGCAAATATAGAACGAGAGC
AGCGCCACAATTTACCAAAAGTACTGGCACCTTCTTTATTGGTACATCTC
CTGCTTTCGAAGTGGTCTTATATTACTATGTCCACGTTCATGGTTGTTGG
GGAATTCCCTTCTTCTTAACACCAGCATTAGCAGCTCAACCAGGGGAACG
AGCATGCATTGCAGGTTTCTATCAAAACCAATGGGGACAGCATCCTCCAA
CCTGTTTCCCCGTTGTTGAAACGGAGCAAGACAGTTGTAAAGACCACCAA
ATGACGCTTCCACCTGGTGCTGCTTTACCGCCCTTGATGACCACTACCAC
CACAACCCCACACCCTGCCACCACCTCCCCATCTACAACCACCATCAACC
CGCCTGAACCACCAAAGGAAGATGGtgttggaaaatattttcaactggTT
TATAAAAGTATCGAAAGTTTTTTAGAAAGAGCTAAATTATTTTCCAGCGa
agttcttaagaaattggTGGAGCCAATGaagaaatttgaagatgaaATTC
ACACAGAAGATGACGTTGCCAAAGATAACGGTGATGATTCAAAGGGCGGT
GAAGGTGATTCGAAGGGTGGTAATGGAGATCCGCCCCCTGATGCCACGTC
TTCAAGGAGTGAAACAAGTGGTTATGAAGAAGGAGTAGAGCAAGCTCAAT
AATTTGTCGAACATATCATAAACCAGCTATTATATAATTCAATATAATAA
CAAAATCCAATATGGCTCGCATGTAAAGATCggatattttgcatttttga
gtCTCTCTAAGAAGGCTACGAAAACCAGCAAGAAGTTAAAACAAAATTCC
TCTCAGTAACATTTTGCTGTAAACTTTATTTTATCCGTTTATGTCATggt
attttttattaatttttaaaataattattaGTAATCACATATCTACAAAA
TTCTCG
Run BLAST on NCBI

protein sequence of TCONS_00073249-protein

>TCONS_00073249-protein ID=TCONS_00073249-protein|Name=TCONS_00073249-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
MPGMTEQNFRAGIYLLFFGDDWHIFKHVFRGERKTKVNRGRTTRTLTGYH
NWYKFYTDERANNIEYLGSKDNNMVQLLQTRNDRHFFLGKYRTRAAPQFT
KSTGTFFIGTSPAFEVVLYYYVHVHGCWGIPFFLTPALAAQPGERACIAG
FYQNQWGQHPPTCFPVVETEQDSCKDHQMTLPPGAALPPLMTTTTTTPHP
ATTSPSTTTINPPEPPKEDGVGKYFQLVYKSIESFLERAKLFSSEVLKKL
VEPMKKFEDEIHTEDDVAKDNGDDSKGGEGDSKGGNGDPPPDATSSRSET
SGYEEGVEQAQ
Run BLAST on NCBI

transcript from alignment at scaffold_89:59503..67686+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073249 ID=TCONS_00073249|Name=TCONS_00073249|organism=Clytia hemisphaerica|type=transcript|length=8184bp|location=Sequence derived from alignment at scaffold_89:59503..67686+ (Clytia hemisphaerica)
TGGCGCTCGTATTTAttatcattttgttttgatcaaGTCGCACTTGTTTG
CTGTATGCAAACAATGAAACAAACATTCAAACCTTTATTATTCGGTATTT
CCATGCTTATTGGTGCgttaaaaattcaaagaatttgtAAACCTTTTCGA
CTTGATTTTGCTTTGAAATCAATAaatcttttggttattttgctGTTGGT
TTTATATTTCTTCATACTGATGGTACTAAAGCAAGAATGACAActaaaag
aattttatttttccattttctacTGACGCTAATCGTATCTTCGGGTAAgc
atttcattttccttttgatgatctatttttttatatagaaaCATAAGGCT
AAAATCCTTAGTTTGATTCTAAGAGGCAATACAGTAGTTTAAAAGTCTAC
AGGAGAGGATTTTGGCTTCATAAACATGTTTTACTTTGACCTTTGATTGT
CTTAAATTCATTACAGTCATTCCAGGCTTAGCCTTGttctgaaattgttc
ttatttttggcccTTTTGTGCCTTAttgcagtagcgtagccaagaggggt
gCAAAATCTGtttaggagagcagatttttacgtcactgtaattatctatt
atgaataaaataaataattacaatatcgtaaaaatctgctctcctacaca
aattttgcgcccaaGAGGGGCTACtgttattgttcttataaaattgtttt
tatgatACTGTAGTAGAGTGTACTTTACGAAAGATTTCAAGTTGGAGAAC
ATTTAAGAATAATTTAGCCTTGAAGTAACAAAGGGATCAGACCAGGCCTG
ATAAAAAAAAGTTCGTTTTATAGCATAACGCACGTCGAATCTAACAAATC
TgcacaaaattttcatttctacGAATTTTCGAtcctttgcattaattgct
CTTGTACGTTAATTAAttacaatatcaaaagaaagggGTAATAAAGTTTT
ACGGTTTTCCCATCATTTCGAAATGAACTGTGGAATTGGATCATTTTTCG
TTGAAATAATTATGACGCGTGAGATtcatttatgtttttttctctttatt
ttatAGATTGTGTTAATAATCCTACATTTAACCCAACAAGATGTTATAAT
GTCCACGTGGAGTAAGTTTTTATTACGTTCTATTGTATTATAGCCGACtt
ctatacagggtgtccctaattaagtatcgagtcgaaacacaactNgacag
aaaatacaatggaaaagctattaaaatcgactcactcatgagcaaatgcc
aaattacaaatgccagttggtctaaacgcagcctataagtagaaagtttt
atgtgcgtgttcacaaaattgtattttaagctctgtctcttttttcttcg
tcattacaattaatttatacgttgtaactaccttttgtattaagcctgtg
tgatggagaacgttcttatattttagcgataacacacacaaacttttcta
ctcaatcgcatgctcaaactcgatactttgattagggacaccctgtatat
tttcttacattttgttaaacacacgcaacaatcttctactcagaatcatg
tttgaactcgatactttttttccggacaccctgtacaatGACAGTTTTTT
CCTCGTTGTTCACTTTCAAGCTTGAgagcaaggatttattatacactgga
tatacaagtaacagatttttgccgatttctcgtgtactagctgtgtccgc
agtaatgatattattgttcactctcctcccctcattaaatgatttNaaga
tatttccaattgaaaatttcgtgtcactataagcattttgtctgaatttc
ttgtctagtgatgtttttctcacattagatttcacaaatgtatccagttT
GGAATGGTAGCCTTCCtttcaaactttcttttctgcaaatgtacaaaaag
aaagagctagagaactttttaaaataagactgataaacatttccaaaaat
cagacatcttcgagccgccatgacagttgtcctttgcggacaaaactaga
acatcaattgttttctgaaacaattatcgctctccatcgttttatgagtc
gtttatccagtgtataataaatcccacagatatctgtaaagcccgaaggg
ctagatttgcagctttgttcaaaaagtgaagctcatctttggaaggattt
cctactaGAGTCACGTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNcggcacgaaatttaaaaagtcaaatttttgcttca
cttttttttgctggagaaagcttaaagttgcaaatctagcccttcgggct
tagatatctgtgatAAATCCTTGTTGAGAGAAAACacctttttctataag
aacatccaaaattttttaaacttatgaaatttatgattttatgacattta
tttcatttaaaggttttgtttttacataggtgtttccgtttcatatcaga
cacatatttcatgttacagtaaaacctctaattaagggacactctaaaag
gcgcacacctctgattagcggacaatttcattttccccggccgtttccta
gtcaaatcctcataaaaaagtactaaaaggcggacactcaattagcggNT
ATGTCTTTTgagtatttccctcactttttgtcccatgaaacaaaaaaagg
aaCCATGGGACACacacgcgaaaaaaacttttcgagTCCTAAAGCCTTAA
CTATTTATCTTTTCAGTGATTTTCGAGCATTCGTCCGAGGTATTTGGGAT
GCCGATGCACCGTACCGAATCAATCCGAATGGAAATAACCAGNtttcatt
ttccccggccgtttcctagtcaaatcctcataaaaaagtactaaaaggcg
gacactcaattagcggaccttctgattagcggaccctctgattagcggac
caATTTCTTCGCACGAATTGGCCAAAACCCccattttagctctccaatta
gcaaacattgaatatcaaacggacacagacgtccaaaatcgaaaaaaaaa
aataggtattttcatttcaagcacctattagtcttattattcaaaNTCAA
CCACTAAACGATCCTAATTTGCAGCATTTCTTCACGAACCCCATTGCTGA
TGATCGATTTAACAATGTAATATACCAATGTATGTACTCTAAATTCTTTC
TAACTCGATCTAACATAGATTCAGAATTTGATGTGATCCGTTTTGAtctg
ctttgtaacgtctttttttaacgttttgaaATTTCACATTCACACTTGTT
TCTAGCCTGTACCACCCCCGCCCACGGGTGTttcatatattttgaaaaaa
actaattgTTTTAAACTGTAATAAACTGAACTTTgcgttatcttttcagt
cagcgaaGAAGATTTTGGTACAACCTGATCGTTTCGTTTTGGATTGATAG
GccttatataaaaattttgagtaaaaataTAATCGAAATTTATAATATTA
CCAAACATCAAGAATGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTTGTCCTTTAGCATTTGCACCTTTGGTTGCTG
AAGACACAGAGGACGACCAACAAGCCCATCTCTTTATCACTTCTATTATT
GCATCAGATGTCGGTCAACGAGCTATCCAACTCATGCCAGGAATGACTGA
ACAAAATTTCCGCGCTGGTATTTATTTACTCTTCTTTGGCGATGATTGGC
ATATTTTTAAACATGTGTTTCGTGGCGAGagaaaaacgaaagtgaaccGC
GGTAGAACTACCAGGACACTGACAGGTTATCATAATTGGTACAAGTTTTA
CACGGATGAGCGAGCTAATAATATCGAGTACCTAGGTTCTAAAGATAACA
ATATGGTTCAACTTCTCCAAACCAGAAATGACAGACATGTAAGTACTATC
TCAAACTAAACAGATTGTCCCAGAGATAAAAAAACACatcaaattttgtt
agatcCTCAAAACTTGCTGGTGTgtagaatgggcttttccagaaatagtt
ttttcccaccggggacgaaatttttgcccaattttccagtggggctcagt
ggcgttgtggggaaatttttctggaggggccaaagtcaatttcttttaaa
tgaCGCCCCCCCCCTCCCAAAGTGATATCCCCACCCaccattttctaaac
ttttactaattcatttgcctaggcataatgaggaaggaaatatttagtgg
agaagagtagatttatctttgatgaatggaaaaggggACAACAgacccca
ccatggttggggccgactagaaaatctttttaaatcgactgccaagaatc
taaatcactaaataaaaatagacaaatttgacacttgctagattgaaaag
aaacttaaagaaacaatgtgtaatgcgagcaaagcgagcgaaaaaattga
tgttttatgatttcaatattgctgtcagcaaattggtcttggggcgcagt
tagattttcatttaataacaGGGAGGTTAACtaagtatcaaagataaatc
aacgagacgaacggacgggttttgacccgcaacctgcagtaaacatgtgg
aactgcattttctagaatccaggctaaaacaGCTCAAGAACGAAAAACCG
TGAAAATCTTCGTTGTTGAACAAAGAAGATATAACATCTACTTTGCTAAT
CTTACCATCTTGCAGAGAAAAGGTCCGTtagatttatctttgatacGTAA
ACTCcctaatgctatattgtacacaaaaaacttgtaaatcagctagattg
caaagaagtaaCCATTTAACTGTATTGTGAGCGAAGCgggcgaaaaaaat
tgcaagtattttaaaattatctcagtaaaattagTCCTGGacgcaattta
aggcgcataaagtatgatttttaagattggggtgtttaaaaaaatctttt
ttggcaccccttgctcttcggcgccccttcaaaaaagctccgctgggggg
gccatGCCCCagccccccctgccacaacgccactggtgGGGCTGGgttcc
cagcgggtctgtgttATGATATACATGATATAGTCAAACACTGTGAATAT
CACGGTCTCAATTACAGATCTCATAAAGTGCTTTGAACCTTTGGTTTTTC
ATGACTGGACCTTATAGAAGAGAGGAGGGGGTAATTCTCAAGTTACATTT
TTGGGAAGGATCATCTCAATAGCATTTTATAATTACAGCCactaattttt
caaagagtatTAGGAGAAATCACCCCATTTGATGGCCAAATTAtcaagaa
caagctaagaacatttttagtcttaaaacttaaaacgttaaaaacatccg
aaggcttcaaaaatcttcgattttcttataaaaaaacatgtaatgacCCC
CATCAAATTTTTAGGAATATCTTTTAGAGTGCCAACTCCGATTTGCTTAT
CCCAAGTCGTCTCTCTTGTTTTTTATAGTTCTTCCTGGGANCTTCTAGAG
TGCCAACTCCATTTGCTTATCCCAAGTCgtctcttttgtttttttatagt
tcTTCCTGGGCAAATATAGAACGAGAGCAGCGCCACAATTTACCAAAAGT
ACTGGCACCTTCTTTATTGGTACATCTCCTGCTTTCGAAGTGGTCTTATA
TTACTATGTCCACGTTCATGGTTGTTGGGGAATTCCCTTCTTCTTAACAC
CAGCATTAGCAGCTCAACCAGGGGAACGAGCATGCATTGCAGGTTTCTAT
CAAAACCAATGGGGACAGCATCCTCCAACCTGTTTCCCCGTTGTTGAAAC
GGAGCAAGACAGTTGTAAAGACCACCAAATGACGCTTCCACCTGGTGCTG
CTTTACCGCCCTTGATGACCACTACCACCACAACCCCACACCCTGCCACC
ACCTCCCCATCTACAACCACCATCAACCCGCCTGAACCACCAAAGGAAGA
TGGtgttggaaaatattttcaactggTTTATAAAAGTATCGAAAGTTTTT
TAGAAAGAGCTAAATTATTTTCCAGCGaagttcttaagaaattggTGGAG
CCAATGaagaaatttgaagatgaaATTCACACAGAAGATGACGTTGCCAA
AGATAACGGTGATGATTCAAAGGGCGGTGAAGGTGATTCGAAGGGTGGTA
ATGGAGATCCGCCCCCTGATGCCACGTCTTCAAGGAGTGAAACAAGTGGT
TATGAAGAAGGAGTAGAGCAAGCTCAATAATTTGTCGAACATATCATAAA
CCAGCTATTATATAATTCAATATAATAACAAAATCCAATATGGCTCGCAT
GTAAAGATCggatattttgcatttttgagtCTCTCTAAGAAGGCTACGAA
AACCAGCAAGAAGTTAAAACAAAATTCCTCTCAGTAACATTTTGCTGTAA
ACTTTATTTTATCCGTTTATGTCATggtattttttattaatttttaaaat
aattattaGTAATCACATATCTACAAAATTCTCG

Coding sequence (CDS) from alignment at scaffold_89:59503..67686+

>TCONS_00073249 ID=TCONS_00073249|Name=TCONS_00073249|organism=Clytia hemisphaerica|type=CDS|length=1872bp|location=Sequence derived from alignment at scaffold_89:59503..67686+ (Clytia hemisphaerica)
ATGCCAGGAATGACTGAACAAAATTTCCGCGCTGGTATTTATTTACTCTT
CTTTGGCGATGATTGGCATATTTTTAAACATGTGTTTCGTGGCGAGagaa
aaacgaaagtgaaccGCGGTAGAACTACCAGGACACTGACAGGTTATCAT
AATTGGTACAAGTTTTACACGGATGAGCGAGCTAATAATATCGAGTACCT
AGGTTCTAAAGATAACAATATGGTTCAACTTCTCCAAACCAGAAATGACA
GACATttcTTCCTGGGCAAATATAGAACGAGAGCAGCGCCACAATTTACC
AAAAGTACTGGCACCTTCTTTATTGGTACATCTCCTGCTTTCGAAGTGGT
CTTATATTACTATGTCCACGTTCATGGTTGTTGGGGAATTCCCTTCTTCT
TAACACCAGCATTAGCAGCTCAACCAGGGGAACGAGCATGCATTGCAGGT
TTCTATCAAAACCAATGGGGACAGCATCCTCCAACCTGTTTCCCCGTTGT
TGAAACGGAGCAAGACAGTTGTAAAGACCACCAAATGACGCTTCCACCTG
GTGCTGCTTTACCGCCCTTGATGACCACTACCACCACAACCCCACACCCT
GCCACCACCTCCCCATCTACAACCACCATCAACCCGCCTGAACCACCAAA
GGAAGATGGtgttggaaaatattttcaactggTTTATAAAAGTATCGAAA
GTTTTTTAGAAAGAGCTAAATTATTTTCCAGCGaagttcttaagaaattg
gTGGAGCCAATGaagaaatttgaagatgaaATTCACACAGAAGATGACGT
TGCCAAAGATAACGGTGATGATTCAAAGGGCGGTGAAGGTGATTCGAAGG
GTGGTAATGGAGATCCGCCCCCTGATGCCACGTCTTCAAGGAGTGAAACA
AGTGGTTATGAAGAAGGAGTAGAGCAAGCTCAATAAATGCCAGGAATGAC
TGAACAAAATTTCCGCGCTGGTATTTATTTACTCTTCTTTGGCGATGATT
GGCATATTTTTAAACATGTGTTTCGTGGCGAGagaaaaacgaaagtgaac
cGCGGTAGAACTACCAGGACACTGACAGGTTATCATAATTGGTACAAGTT
TTACACGGATGAGCGAGCTAATAATATCGAGTACCTAGGTTCTAAAGATA
ACAATATGGTTCAACTTCTCCAAACCAGAAATGACAGACATttcTTCCTG
GGCAAATATAGAACGAGAGCAGCGCCACAATTTACCAAAAGTACTGGCAC
CTTCTTTATTGGTACATCTCCTGCTTTCGAAGTGGTCTTATATTACTATG
TCCACGTTCATGGTTGTTGGGGAATTCCCTTCTTCTTAACACCAGCATTA
GCAGCTCAACCAGGGGAACGAGCATGCATTGCAGGTTTCTATCAAAACCA
ATGGGGACAGCATCCTCCAACCTGTTTCCCCGTTGTTGAAACGGAGCAAG
ACAGTTGTAAAGACCACCAAATGACGCTTCCACCTGGTGCTGCTTTACCG
CCCTTGATGACCACTACCACCACAACCCCACACCCTGCCACCACCTCCCC
ATCTACAACCACCATCAACCCGCCTGAACCACCAAAGGAAGATGGtgttg
gaaaatattttcaactggTTTATAAAAGTATCGAAAGTTTTTTAGAAAGA
GCTAAATTATTTTCCAGCGaagttcttaagaaattggTGGAGCCAATGaa
gaaatttgaagatgaaATTCACACAGAAGATGACGTTGCCAAAGATAACG
GTGATGATTCAAAGGGCGGTGAAGGTGATTCGAAGGGTGGTAATGGAGAT
CCGCCCCCTGATGCCACGTCTTCAAGGAGTGAAACAAGTGGTTATGAAGA
AGGAGTAGAGCAAGCTCAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045443XLOC_045443Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073249-proteinTCONS_00073249-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073249-exon-scaffold_89-1491911889:59503..59796TCONS_00073249-exon-scaffold_89-1491911889:59503..59796Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1510915933:59503..59796TCONS_00073249-exon-scaffold_89-1510915933:59503..59796Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1575043694:59503..59796TCONS_00073249-exon-scaffold_89-1575043694:59503..59796Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1491911889:60559..60613TCONS_00073249-exon-scaffold_89-1491911889:60559..60613Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1510915933:60559..60613TCONS_00073249-exon-scaffold_89-1510915933:60559..60613Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1575043694:60559..60613TCONS_00073249-exon-scaffold_89-1575043694:60559..60613Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1491911889:62419..62831TCONS_00073249-exon-scaffold_89-1491911889:62419..62831Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1510915933:62419..62831TCONS_00073249-exon-scaffold_89-1510915933:62419..62831Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1575043694:62419..62831TCONS_00073249-exon-scaffold_89-1575043694:62419..62831Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1491911889:64782..65140TCONS_00073249-exon-scaffold_89-1491911889:64782..65140Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1510915933:64782..65140TCONS_00073249-exon-scaffold_89-1510915933:64782..65140Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1575043694:64782..65140TCONS_00073249-exon-scaffold_89-1575043694:64782..65140Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1491911889:66752..67686TCONS_00073249-exon-scaffold_89-1491911889:66752..67686Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1510915933:66752..67686TCONS_00073249-exon-scaffold_89-1510915933:66752..67686Clytia hemisphaericaexon
TCONS_00073249-exon-scaffold_89-1575043694:66752..67686TCONS_00073249-exon-scaffold_89-1575043694:66752..67686Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_89supercontigscaffold_89:59503..67686 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.595458	0.416824	0.413224	0.44683	27.533	25.5169	371.441	397.409	115.65	93.726	223.934	82.6983	65.6694	59.1497	52.9771	122.031	20.0194	15.6753	0.428491	0.182053	11.4594	12.8462	16.9128	18.7245	18.0701	23.2645	16.6671	5.59051	0.859898	0.977464
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR018998Endoribonuclease_XendoU
Vocabulary: Molecular Function
TermDefinition
GO:0016788hydrolase activity, acting on ester bonds
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073249 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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