TCONS_00073229 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073229
Unique NameTCONS_00073229
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1353

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073229 ID=TCONS_00073229|Name=TCONS_00073229|organism=Clytia hemisphaerica|type=transcript|length=1353bp
ATGTAAAATAGATTTTCCAGCCATCAATCAAACTTCCTGCCAAATTTTTA
CCTACGTTTTAGTGGTTAAAAAATGGAGACGTTAATAAAATATGTAGCTG
GTTTGTTGGTTGCAAAATATGGtttagattttgttttgtttttcatgaGA
ATGATCAAATTGTATTTGTTACCGAACCTGGGTCTTGGTTTGAAGTTGAA
AAAATATGGCTCCTGGGCAGTGGTGACTGGAGCTACAGATGGTATCGGCA
AAGCAATTGCAAAGCAGTTAGCAAAACGGGGGATCAACCTTGTTTTGATA
AGTCGTTCAGAAGAAAAACTCAAAGCCACAGCTCAAGAAATTGGCGGGAA
AGTGGATGTAAAAACCATCTCTTATGATTTCTCCAACCCAGATGGTTATT
CAAAGATtgaaacagaattgaaaaacttGGATATTGGTCTGCTTGTGAAT
AATGTTGGAATGGGTTATGATCACCCTGATTTTTATCTCCACTATGACGA
ACAaTACTTCGACAAGATGATTGACATCAATGTAACTTCAGTATTGAAGa
TGACAAGAATTGTTTTGGATGGTATGGTACAGAGgAAGAAGGGATTATTG
GTTCATGTTTCATCTGCTTCTTCACTAATGCCAATTCCTTTCTTGTCTGG
TTACAGCGCTTCCAAGAGCTTTGTCAACAACTTTGGTGAATCTCTACACT
ATGAATACATGGCAAAGGGAATCAAAAGTCAGGTTGTGTTCCCTTACTTC
GTGGCTACCAAGATGTCAAAGATGCGTTCTAATGGTTTTTTAGTTCCCAG
TGCCGACCAGTACGCTTGTCAAATGGTAAACGCCATTGGTTTAACGCCCA
CTATGGCGGGGTACTGGGCACACGAGTTGTTCCTTGCTGTTTCCACCCTT
CTCCCAAGATGGCTTGTGATTGGTCAAACGCGCAAAATGATGGATGCTAC
TCGAAGAAGATGGGAAAAGAAGCAACAAGCCAAAAAAGATTGAGTCAGAC
gtTCATCAATACATTATGGAAAGAATTTCGACCGCGGGATCTGTAAGATG
CATGTAGTGGATTTGGCAATCTAGTTTTTTGTACAATTAGGCATAAGTGA
ACTTTAGGTTAGCTATATGATCATCACGTTAACTATTATGATAAATGGAG
GAATTATATGCTTTTGGCGGTATTGTTTGGCCATTTGGCCatttttttac
tgatttttagATATTTAAATTCTTGGATAGGTTATTTTGATTTCCGTCCA
CCATAAcagttttttgtaagaaattttgcaagaaaatattatcaaatgaT
GTTCCAATTTATCACTTCATTTATTCGAtaattttgttcttttcaaaatc
aac
Run BLAST on NCBI

transcript from alignment at scaffold_88:404618..413099-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073229 ID=TCONS_00073229|Name=TCONS_00073229|organism=Clytia hemisphaerica|type=transcript|length=8482bp|location=Sequence derived from alignment at scaffold_88:404618..413099- (Clytia hemisphaerica)
ATGTAAAATAGATTTTCCAGCCATCAATCAAACTTCCTGCCAAATTTTTA CCTACGTTTTAGTGGTTAAAAAATGGAGACGTTAATAAAATATGTAGCTG GTTTGTTGGTTGCAAAATATGGTTTAGATTTTGTTTTGTTTTTCATGAGA ATGATCAAATTGTATTTGTTACCGAACCTGGGTCTTGGTTTGAAGTTGAA AAAATATGGCTCCTGGGCAGGTGAGTGACTTCATGAAGATCTACATCATG ATTAGTTTAAAATCCAATTTGCAGTTCATCCCTTTAAAAAAAGGTCAAAA CTTCTAAGTTTCTCCCTTTTGTCAAAAATTATTCTAAAGGAGAATTAGAT GACTTTAGATATTTTGCCTGCTGAAATTCACTATGGTTCTGAGCAAAACC TCCAAACATTTTCCTAATTTTCCTAATTTTTCAAAGTCAATAGAAATTAG AGAATTTCTACTATTATTAAGAATGAAAACCNCCTAATTTTCCTAATTTT TCAAAGTCAATAGAAATTAGAGAATTTCTGCTATTATTAAGAATAAAAAC GTTCTTGTCACTTTCAGTCAATAAGATGTTTTTTAGAAATAAGTCATCTT TTTGATACTGATTTCTCTTAGTGGTGACTGGAGCTACAGATGGTATCGGC AAAGCAATTGCAAAGCAGGTAACAACGATTCTAATTGAATTCACTTTATT GATAGGGTGTTTCAACTACTTTTAAGACCTACTTTTTCTTTTTAAGAAAC TAGTTTTACCAAGCAGCCTCAATGTTTCTTAAGAAATCGGACTTTTGAGC CTTAAATGTTTTTCTAAACTTTGTCAAGCTTTAAAAGAAGCATGTCGATA ATACAATAGTCTAATAGACTAATCTACAGTACTTTCCTATCTTCTATATT GATTTTCTGACTTTCTCAAGTGTTTCTAACTGTTATGTACGTATATTTCT GGAACCTTGATTGGAAGGTTCTTAAAAAAAACGAACTAAAAAATGCTATT TTCTCATTCTCAGCCTCAGCATGTTTCTTAGATGTTTCTTAGTTTTTAGG CATTCTCACTACTGGGTCAGAAACCGTTCGATTCGGACACACGAACGCTT TTCCATGCTTGACGAATNGGTCAGAAACCGTTCGATTCGGACACACGAAC GCTTTTCCATGCGTGACGAACGGGTCACCCGTTTGTGATGAATGCTTATG ATTTTTTTTAATAAAAGCGTTCGTCACGAACGGGAAACCGTTTGTGACGA ACGGTTTTTATAGAAAACCGTTCGTGAAGAATGCTTTAAAAACTTCAAGA TATAAAACCATACGTGAAGAATGCTTTTCCGTTTACCGCGAATGCTTTTG AACAATTGTTTAAAATCGTTCGTCACAAACGGTTGTAAGTTTTTAAAAAT GTGTGCTGAATTGGCTCTTTTTAACAATTGTCAAAATTGTCGTCTTTAAA GGTATTCTATAGGAATAAAAGGAGCTTATTTTATGCAGNTCGTCACAAAC GGTTGTAAGTTTTTAAAAATGTGTGCTGAATGGCTCTTCTTAACAATTGT CAAAATTGTCGTCCTTAAAGGTATTCTATAGGAATAAAAGGAGCCTTTTT TATGCAGTCTTTATGCTGAGCCAGATAAATCAAAGCTACTTTTTTACGCA ACGATATCCTGTAAACAAGTGAAAGATCAAAATTTGTTTCGAGATGTGAC CTCGCATTCTTTTGCTTTTGTAAACAAAAAAAAACTAAGTTGATTTCGAG CAAATTTACTATCGAATGTTTTGATTATACATAAGATAGAAAACGTTCTA TTTATTATAAACATAAGGGGATTCGAAAGAGTATCAGTAAAAGTCGGAGG AATGAGGAATGTTTTTTTTATTCAATGTATTTTCATTTTTTCAAAACCTT TTTCTAATCTTGTCGCACTTGTTTTTACTACATCCGCATCGTCAGACCTT TCAATCAAAACAAAACCTTTAACAGAGGTTTTCCTCACATTGACTGTTTT TAAAGTTTAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGACGAACGCTACCTTCTT AAAACGCTCGTTGCATAAACGAGTCGAATTCTACGTTTATAACGAACGCT TTGGAAAAGAAAGTCGCTCGAAAAGCATAAGTAATAGTCATTGCATTGTT TTTCTAAAGATTTTCGTGTTCGAATGTTTTTGAATATGTACAAATTAAAA CATTCGAGACTAGAGAATGTAAATTTAGAATGGGATCTCTTTTTCAAAAA TGGTGGGGACTGATAACTTTTCACCATGTTTTGTTTTTGGAGAACAAATC TCACATAAACCCCTGTCTCTTACTCTATTCTTTATCGAATGCTTTCTCCG TAACTTTTATGAGTACATGTTTTTTTATAAGTATTGCGCTGATAAGCATA TCTAGGCTCATGTATGACAAAAATTTAAGAGTTTTTCAGAATTTGTTTGC TTTTGGCTGGATTTTCGAAATTTCTCTAAAATTTTGCTTAGGATATAAGC ATCCTTCAAAGCATTTTTCAGCTTTGTAAATCTCTCNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNCAAACGGGTTAAAAAGAAAAAGC GTTCGTCGCGAACGGTCGCAATCAAACTTTTTTGTAGGGCGTTCGCGAAG GATGCAAAAGCATTCGTCGCGAACGGTTAAACCGTTCGTCACGAATGGAA AAGCGTTCGCGTGTCCGAATCGAACGGTTTCTGACCCAGTAGTGTCTGAG CCTCATGTTTCTTAAAAGTGTGTTTCTTTAAAAAAAAAAGTGTATTTTAA TTGCTCTTGTTGCATCAACGATTTTCTAAACTTATATTCTAGTGACCAGA ATAAGATACTGTCACTATAAGATTGGAAAATTAATTCTCCCCAATAATTA CTTTGAAGAGAAATTTAGAGGTTGCGGGAATAACGACCAATGTGCATGGT CAAGTATAGTGAAGGTGAGGCTTTCAATGTAAGTCGAAAGATAATGATGA GAACCTAATTACAACAGAAACACTTGTCAGAATGATTAGATAACAATCTC ATTTTATTCCGTTGTAGTTAGCAAAACGGGGGATCAACCTTGTTTTGATA AGTCGTTCAGAAGAAAAACTCAAAGCCACAGCTCAAGAAATTGGTAAGTG CATGATTCATGATTTAACCCTGGGGTGCCCAAGGTAAGTGATCTACCATA GGTACGGTCTTAATTAAGGGTACCTTTTTCAGGATTCCCAGTGGGTGGAT AAAGTGAGAACAACAAAGTAGGGAAAATTGCTTAAAAATTTGATGGCTGA CCATTCTCTCAAGAAAATGCACTGTAAGAGTGGAATTTTTGACCAAATTT ACCCATTTTCTCTGCTCTGTATAGGTCAAATTTTAAAAGGCATCATTTTG GGCTGTACATGCAGTACTTTTCGAGTGCAACCCCCACAAGGATTTTACAG CTTCTTTGGTTTAGATTCAAAGTTTCTATCGTCACTGTTAATACCTCCCC AGGGCTTATCAATAAATACCAAATTATCTTGAACTGTGCCACAGTTTGCT CACTACTAATAAAATGTGATATACTATGTAACATACTACCCACACATTGA AAGACAAGGAAAGATTTAGTTAAAAAATATCTAACCAAGCACAGCTTTCA GTGCTCCTTAGCCAGTGCTGGCATCGTCTCCAACTAAGCCCTCAGATGTA AATTCACTAGATAGCATAAAATAAATTATCTCTTTGTTTCAGGCGGGAAA GTGGATGTAAAAACCATCTCTTATGATTTCTCCAACCCAGATGGTTATTC AAAGATTGAAACAGAATTGAAAAACTTGGATATTGGTCTGCTTGGTAATA ATATGACATTGTTTATAATTGCATTAAAAAAATGTGTTGAGTGAATTTTT CGAATAAAAAGTTTTTCTTTTTTCTGTCTGTTTATATGTATTTTTCGGTC TTCCCAAATTTTTCATTCCATTGGAAGATTTTTTTTTAAATCGTTATCTT TTATGAAAATATAATTTTTTATACCTATTTTTCTTTGCAGTGAATAATGT TGGAATGGGTTATGATCACCCTGATTTTTATCTCCACTATGACGAACAAG TATATTTTCTTTAAAACAGTTTTAAATGTTTATTGTTGTTGTCCTTTATG TTAATTTTCTCTTTTTATTTACACGAAAACAGTTGTTTGTGTGTGTATCT TATTTTTTGGCAAAACCATAAAAATATGAACATCAAAATTCAAAGTTTGA AAAATCCCTAGGAATATGATAGAAATGTGTCCAAAATAGAGCGAAATATT ATTCCTGCGAAATGTGATTTTTTCGACCGGAAAAATTAGTTTCCTTTGAA ATTAGTCCCCTGAAGGTATAATACTTAGTTGATAATGACACCCTTTATCG TTTCATTCATTTTAGTACTTCGACAAGATGATTGACATCAATGTAACTTC AGTATTGAAGGTTTGCCAAATCTCTTTTGAATCGTCTTGTTTTTTTAATT CGTTTGTTCTTTGAATGCCACACCTATGAGACAGTTTTTTTTTGCAAGGC CAATACTCTGTAACAAGTTGCCCACTACGAAAGCCAGCCCCATTAATTAG AGTGAAAAGTCTGTCAGTGATGCCTCTAGCCTGGGGTCAACTTGAAGCCT TTTGGATGATAAGTAAGTAGCCTGGAAATGTAGTGTAGTTCTCAATTTTT AGCTTTTTCTTTGACAGAGTCTGTCAGATTCTAGTTGCGTGTTGAATGTT AAAGGATTAGGTATTTGTTTTTATTTAAAAACAGGGTTTTTCAAATTAGC TTTTTTGGGCTCTCATTTTTTCAACTCGAAGTAGCTATTGGGTTATTTGG ATTTTAGTGTTTTTCTTTCAAAATGGAGGCCTCGTCAAGTGGTTCAAATC TTCTCCATGTTCAGCCAGAAATAAACTCCAGACCATGCTATCCGTTGATT CAAAAGAAGAAAAAGAAAACAATTAGCCATTGAAATAAAAATTTTCTAAT TTTCAGATGACAAGAATTGTTTTGGATGGTATGGTACAGAGGTGTGAATC TTTATAATTTCTTTTCATGTTCTATCTTTGAAATGTTTTGAGACAACAGA CAGCCAAAGGTACTTCTTTCCCTTGTTATCCTGCTTCTCATCGCCTACTC AAGTGGAAATGAGATGAAATGCAACAATTTTATGCAACAACGTTAACTAG ATTTTGATTTTAGTGGTATGATCTTCTTTTCTATCGAGTTATATGAAAAA TTGTAATTTCCATTTTCTTTTCAATTTAGGAAGAAGGGATTATTGGTTCA TGTTTCATCTGCTTCTTCACTAATGCCAATTCCTTTCTTGTCTGGTTACA GCGCTTCCAAGGTATCCTAACCAAGACTTTCCCATCAATATATTGGCACT GCGCAGTATAAATTCATCAAATAAATAAAGTATTTTATCTGAAATCTTCA CTGTGTGATATCTCGATTTAAGAGAAAACACATATCAAGCCTCATTCAAC TGAGGTCCTTTCTTTTGCTCTTCTCACATTTGCAGTTCATTATTGCGTTG GTAACCTGAGGGGAACAACGATAACTATGTGATTCTCTCTGTTCTCTTTT TCCAGAGCTTTGTCAACAACTTTGGTGAATCTCTACACTATGAATACATG GCAAAGGGAATCAAAAGTCAGGTTGGTAGACACGCTTTATATAAACATGA GCTTTTCCCGAAACTTTTGATAATTTTGGGCATTTTTCCAGGGAAGATCT GCACAATTATTTGGCTTGAAAAGGTTCGTCCATCTCCCTTTATGGACATT AAAAGAAACAGCCAGTTTCCTCTTAAATTAAAGAAATTATTAAATTTGTG TTGAGTCGACTTTTAAATATTATGGCTTCAAAGGTAGCTATGAAAATCAT AATTGAACAAATTCTGAGTGATTGAGGAAAGTTTTTTATTTTGACTTTTT CGGCAGGTTGTGTTCCCTTACTTCGTGGCTACCAAGATGTCAAAGATGCG TTCTAATGGTTTTTTAGTTCCCAGTGCCGACCAGTACGCTTGTCAAATGG TAAACGCCATTGGTTTAACGCCCACTATGGCGGGGTACTGGGCACACGAG TTGTTCCTTGCTGTTTCCACCCTTCTCCCAAGATGGCTTGTGATTGGTCA AACGCGCAAAATGATGGATGCTACTCGAAGAAGATGGGAAAAGAAGCAAC AAGCCAAAAAAGATTGAGTCAGACGTAACCTTTGTTTGTATGTTTAGCCT TTTGAAGCACTATCATGTTTATAATGAACACCTCTTTTGAGAAAGAAAGA CATATAACACAAGTATGATGAGTTCAGATGAGTTGTTGATGAAAATCTAT ACTGCATAAGAACAGAAAAAAGACACCTGTATAAGTGTGTTTTAATGTGT TTCACTTTCAAATTCATCTTCTTCTTCAGGTTCATCAATACATTATGGAA AGAATTTCGACCGCGGGATCTGTAAGATGCATGTAGTGGATTTGGCAATC TAGTTTTTTGTACAATTAGGCATAAGTGAACTTTAGGTTAGCTATATGAT CATCACGTTAACTATTATGATAAATGGAGGAATTATATGCTTTTGGCGGT ATTGTTTGGCCATTTGGCCATTTTTTTACTGATTTTTAGATATTTAAATT CTTGGATAGGTTATTTTGATTTCCGTCCACCATAACAGTTTTTTGTAAGA AATTTTGCAAGAAAATATTATCAAATGATGTTCCAATTTATCACTTCATT TATTCGATAATTTTGTTCTTTTCAAAATCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045424XLOC_045424Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073229-exon-scaffold_88-1575043694:412880..413099TCONS_00073229-exon-scaffold_88-1575043694:412880..413099Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:412432..412478TCONS_00073229-exon-scaffold_88-1575043694:412432..412478Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:408257..408332TCONS_00073229-exon-scaffold_88-1575043694:408257..408332Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:407556..407657TCONS_00073229-exon-scaffold_88-1575043694:407556..407657Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:407301..407359TCONS_00073229-exon-scaffold_88-1575043694:407301..407359Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:406940..406984TCONS_00073229-exon-scaffold_88-1575043694:406940..406984Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:406359..406393TCONS_00073229-exon-scaffold_88-1575043694:406359..406393Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:406039..406120TCONS_00073229-exon-scaffold_88-1575043694:406039..406120Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:405729..405794TCONS_00073229-exon-scaffold_88-1575043694:405729..405794Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:405176..405443TCONS_00073229-exon-scaffold_88-1575043694:405176..405443Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:404618..404970TCONS_00073229-exon-scaffold_88-1575043694:404618..404970Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:412880..413099TCONS_00073229-exon-scaffold_88-1510915933:412880..413099Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:412432..412478TCONS_00073229-exon-scaffold_88-1510915933:412432..412478Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:408257..408332TCONS_00073229-exon-scaffold_88-1510915933:408257..408332Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:407556..407657TCONS_00073229-exon-scaffold_88-1510915933:407556..407657Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:407301..407359TCONS_00073229-exon-scaffold_88-1510915933:407301..407359Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:406940..406984TCONS_00073229-exon-scaffold_88-1510915933:406940..406984Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:406359..406393TCONS_00073229-exon-scaffold_88-1510915933:406359..406393Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:406039..406120TCONS_00073229-exon-scaffold_88-1510915933:406039..406120Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:405729..405794TCONS_00073229-exon-scaffold_88-1510915933:405729..405794Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:405176..405443TCONS_00073229-exon-scaffold_88-1510915933:405176..405443Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:404618..404970TCONS_00073229-exon-scaffold_88-1510915933:404618..404970Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:412880..413099TCONS_00073229-exon-scaffold_88-1491911889:412880..413099Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:412432..412478TCONS_00073229-exon-scaffold_88-1491911889:412432..412478Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:408257..408332TCONS_00073229-exon-scaffold_88-1491911889:408257..408332Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:407556..407657TCONS_00073229-exon-scaffold_88-1491911889:407556..407657Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:407301..407359TCONS_00073229-exon-scaffold_88-1491911889:407301..407359Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:406940..406984TCONS_00073229-exon-scaffold_88-1491911889:406940..406984Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:406359..406393TCONS_00073229-exon-scaffold_88-1491911889:406359..406393Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:406039..406120TCONS_00073229-exon-scaffold_88-1491911889:406039..406120Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:405729..405794TCONS_00073229-exon-scaffold_88-1491911889:405729..405794Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:405176..405443TCONS_00073229-exon-scaffold_88-1491911889:405176..405443Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:404618..404970TCONS_00073229-exon-scaffold_88-1491911889:404618..404970Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_88supercontigscaffold_88:404618..413099 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
60.633 62.5859 43.5596 31.3431 27.5676 14.8027 24.5829 29.8316 27.3195 24.9285 24.2336 22.8374 28.0963 26.3941 20.8934 18.0395 25.3938 21.7405 11.0519 8.89365 20.5897 20.2773 39.3502 34.1229 30.481 27.7792 27.8108 25.243 54.9136 44.3248
Blast
BLAST of TCONS_00073229 vs. Swiss-Prot (Human)
Match: DHB12 (Very-long-chain 3-oxoacyl-CoA reductase OS=Homo sapiens GN=HSD17B12 PE=1 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 4.584e-71
Identity = 116/259 (44.79%), Postives = 173/259 (66.80%), Query Frame = 1
Query:  214 WAVVTGATDGIGKAIAKQLAKRGINLVLISRSEEKLKATAQEIGGK--VDVKTISYDFSNPDGYSKIETELKNLDIGLLVNNVGMGYDHPDFYLHYDE--QYFDKMIDINVTSVLKMTRIVLDGMVQRKKGLLVHVSSASSLMPIPFLSGYSASKSFVNNFGESLHYEYMAKGIKSQVVFPYFVATKMSKMRSNGFLVPSADQYACQMVNAIGLTPTMAGYWAHELFLAVSTLLPRWLVIGQTRKMMDATRRRWEKKQQ 978
            WAVVTG+TDGIGK+ A++LAK G+ +VLISRS++KL   + EI  K  V+ +TI+ DF++ D Y KI+T L  L+IG+LVNNVGM Y++P+++L   +      KMI+IN+ SV KMT++VL GMV+R KG ++++SS S ++P+P L+ YSA+K+FV+ F + LH EY +KG+  Q V PYFVATK++K+R      PS + +    +  +GL     GY  H L  ++ + LP W+ +     M  +TR  + KK +
Sbjct:   52 WAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETRTIAVDFASEDIYDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVLPYFVATKLAKIRKPTLDKPSPETFVKSAIKTVGLQSRTNGYLIHALMGSIISNLPSWIYLKIVMNMNKSTRAHYLKKTK 310          
The following BLAST results are available for this feature:
BLAST of TCONS_00073229 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHB124.584e-7144.79Very-long-chain 3-oxoacyl-CoA reductase OS=Homo sa... [more]
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