TCONS_00073229 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073229
Unique NameTCONS_00073229
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1353

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073229 ID=TCONS_00073229|Name=TCONS_00073229|organism=Clytia hemisphaerica|type=transcript|length=1353bp
ATGTAAAATAGATTTTCCAGCCATCAATCAAACTTCCTGCCAAATTTTTA
CCTACGTTTTAGTGGTTAAAAAATGGAGACGTTAATAAAATATGTAGCTG
GTTTGTTGGTTGCAAAATATGGtttagattttgttttgtttttcatgaGA
ATGATCAAATTGTATTTGTTACCGAACCTGGGTCTTGGTTTGAAGTTGAA
AAAATATGGCTCCTGGGCAGTGGTGACTGGAGCTACAGATGGTATCGGCA
AAGCAATTGCAAAGCAGTTAGCAAAACGGGGGATCAACCTTGTTTTGATA
AGTCGTTCAGAAGAAAAACTCAAAGCCACAGCTCAAGAAATTGGCGGGAA
AGTGGATGTAAAAACCATCTCTTATGATTTCTCCAACCCAGATGGTTATT
CAAAGATtgaaacagaattgaaaaacttGGATATTGGTCTGCTTGTGAAT
AATGTTGGAATGGGTTATGATCACCCTGATTTTTATCTCCACTATGACGA
ACAaTACTTCGACAAGATGATTGACATCAATGTAACTTCAGTATTGAAGa
TGACAAGAATTGTTTTGGATGGTATGGTACAGAGgAAGAAGGGATTATTG
GTTCATGTTTCATCTGCTTCTTCACTAATGCCAATTCCTTTCTTGTCTGG
TTACAGCGCTTCCAAGAGCTTTGTCAACAACTTTGGTGAATCTCTACACT
ATGAATACATGGCAAAGGGAATCAAAAGTCAGGTTGTGTTCCCTTACTTC
GTGGCTACCAAGATGTCAAAGATGCGTTCTAATGGTTTTTTAGTTCCCAG
TGCCGACCAGTACGCTTGTCAAATGGTAAACGCCATTGGTTTAACGCCCA
CTATGGCGGGGTACTGGGCACACGAGTTGTTCCTTGCTGTTTCCACCCTT
CTCCCAAGATGGCTTGTGATTGGTCAAACGCGCAAAATGATGGATGCTAC
TCGAAGAAGATGGGAAAAGAAGCAACAAGCCAAAAAAGATTGAGTCAGAC
gtTCATCAATACATTATGGAAAGAATTTCGACCGCGGGATCTGTAAGATG
CATGTAGTGGATTTGGCAATCTAGTTTTTTGTACAATTAGGCATAAGTGA
ACTTTAGGTTAGCTATATGATCATCACGTTAACTATTATGATAAATGGAG
GAATTATATGCTTTTGGCGGTATTGTTTGGCCATTTGGCCatttttttac
tgatttttagATATTTAAATTCTTGGATAGGTTATTTTGATTTCCGTCCA
CCATAAcagttttttgtaagaaattttgcaagaaaatattatcaaatgaT
GTTCCAATTTATCACTTCATTTATTCGAtaattttgttcttttcaaaatc
aac
Run BLAST on NCBI

transcript from alignment at scaffold_88:404618..413099-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073229 ID=TCONS_00073229|Name=TCONS_00073229|organism=Clytia hemisphaerica|type=transcript|length=8482bp|location=Sequence derived from alignment at scaffold_88:404618..413099- (Clytia hemisphaerica)
ATGTAAAATAGATTTTCCAGCCATCAATCAAACTTCCTGCCAAATTTTTA
CCTACGTTTTAGTGGTTAAAAAATGGAGACGTTAATAAAATATGTAGCTG
GTTTGTTGGTTGCAAAATATGGTTTAGATTTTGTTTTGTTTTTCATGAGA
ATGATCAAATTGTATTTGTTACCGAACCTGGGTCTTGGTTTGAAGTTGAA
AAAATATGGCTCCTGGGCAGGTGAGTGACTTCATGAAGATCTACATCATG
ATTAGTTTAAAATCCAATTTGCAGTTCATCCCTTTAAAAAAAGGTCAAAA
CTTCTAAGTTTCTCCCTTTTGTCAAAAATTATTCTAAAGGAGAATTAGAT
GACTTTAGATATTTTGCCTGCTGAAATTCACTATGGTTCTGAGCAAAACC
TCCAAACATTTTCCTAATTTTCCTAATTTTTCAAAGTCAATAGAAATTAG
AGAATTTCTACTATTATTAAGAATGAAAACCNCCTAATTTTCCTAATTTT
TCAAAGTCAATAGAAATTAGAGAATTTCTGCTATTATTAAGAATAAAAAC
GTTCTTGTCACTTTCAGTCAATAAGATGTTTTTTAGAAATAAGTCATCTT
TTTGATACTGATTTCTCTTAGTGGTGACTGGAGCTACAGATGGTATCGGC
AAAGCAATTGCAAAGCAGGTAACAACGATTCTAATTGAATTCACTTTATT
GATAGGGTGTTTCAACTACTTTTAAGACCTACTTTTTCTTTTTAAGAAAC
TAGTTTTACCAAGCAGCCTCAATGTTTCTTAAGAAATCGGACTTTTGAGC
CTTAAATGTTTTTCTAAACTTTGTCAAGCTTTAAAAGAAGCATGTCGATA
ATACAATAGTCTAATAGACTAATCTACAGTACTTTCCTATCTTCTATATT
GATTTTCTGACTTTCTCAAGTGTTTCTAACTGTTATGTACGTATATTTCT
GGAACCTTGATTGGAAGGTTCTTAAAAAAAACGAACTAAAAAATGCTATT
TTCTCATTCTCAGCCTCAGCATGTTTCTTAGATGTTTCTTAGTTTTTAGG
CATTCTCACTACTGGGTCAGAAACCGTTCGATTCGGACACACGAACGCTT
TTCCATGCTTGACGAATNGGTCAGAAACCGTTCGATTCGGACACACGAAC
GCTTTTCCATGCGTGACGAACGGGTCACCCGTTTGTGATGAATGCTTATG
ATTTTTTTTAATAAAAGCGTTCGTCACGAACGGGAAACCGTTTGTGACGA
ACGGTTTTTATAGAAAACCGTTCGTGAAGAATGCTTTAAAAACTTCAAGA
TATAAAACCATACGTGAAGAATGCTTTTCCGTTTACCGCGAATGCTTTTG
AACAATTGTTTAAAATCGTTCGTCACAAACGGTTGTAAGTTTTTAAAAAT
GTGTGCTGAATTGGCTCTTTTTAACAATTGTCAAAATTGTCGTCTTTAAA
GGTATTCTATAGGAATAAAAGGAGCTTATTTTATGCAGNTCGTCACAAAC
GGTTGTAAGTTTTTAAAAATGTGTGCTGAATGGCTCTTCTTAACAATTGT
CAAAATTGTCGTCCTTAAAGGTATTCTATAGGAATAAAAGGAGCCTTTTT
TATGCAGTCTTTATGCTGAGCCAGATAAATCAAAGCTACTTTTTTACGCA
ACGATATCCTGTAAACAAGTGAAAGATCAAAATTTGTTTCGAGATGTGAC
CTCGCATTCTTTTGCTTTTGTAAACAAAAAAAAACTAAGTTGATTTCGAG
CAAATTTACTATCGAATGTTTTGATTATACATAAGATAGAAAACGTTCTA
TTTATTATAAACATAAGGGGATTCGAAAGAGTATCAGTAAAAGTCGGAGG
AATGAGGAATGTTTTTTTTATTCAATGTATTTTCATTTTTTCAAAACCTT
TTTCTAATCTTGTCGCACTTGTTTTTACTACATCCGCATCGTCAGACCTT
TCAATCAAAACAAAACCTTTAACAGAGGTTTTCCTCACATTGACTGTTTT
TAAAGTTTAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGACGAACGCTACCTTCTT
AAAACGCTCGTTGCATAAACGAGTCGAATTCTACGTTTATAACGAACGCT
TTGGAAAAGAAAGTCGCTCGAAAAGCATAAGTAATAGTCATTGCATTGTT
TTTCTAAAGATTTTCGTGTTCGAATGTTTTTGAATATGTACAAATTAAAA
CATTCGAGACTAGAGAATGTAAATTTAGAATGGGATCTCTTTTTCAAAAA
TGGTGGGGACTGATAACTTTTCACCATGTTTTGTTTTTGGAGAACAAATC
TCACATAAACCCCTGTCTCTTACTCTATTCTTTATCGAATGCTTTCTCCG
TAACTTTTATGAGTACATGTTTTTTTATAAGTATTGCGCTGATAAGCATA
TCTAGGCTCATGTATGACAAAAATTTAAGAGTTTTTCAGAATTTGTTTGC
TTTTGGCTGGATTTTCGAAATTTCTCTAAAATTTTGCTTAGGATATAAGC
ATCCTTCAAAGCATTTTTCAGCTTTGTAAATCTCTCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCAAACGGGTTAAAAAGAAAAAGC
GTTCGTCGCGAACGGTCGCAATCAAACTTTTTTGTAGGGCGTTCGCGAAG
GATGCAAAAGCATTCGTCGCGAACGGTTAAACCGTTCGTCACGAATGGAA
AAGCGTTCGCGTGTCCGAATCGAACGGTTTCTGACCCAGTAGTGTCTGAG
CCTCATGTTTCTTAAAAGTGTGTTTCTTTAAAAAAAAAAGTGTATTTTAA
TTGCTCTTGTTGCATCAACGATTTTCTAAACTTATATTCTAGTGACCAGA
ATAAGATACTGTCACTATAAGATTGGAAAATTAATTCTCCCCAATAATTA
CTTTGAAGAGAAATTTAGAGGTTGCGGGAATAACGACCAATGTGCATGGT
CAAGTATAGTGAAGGTGAGGCTTTCAATGTAAGTCGAAAGATAATGATGA
GAACCTAATTACAACAGAAACACTTGTCAGAATGATTAGATAACAATCTC
ATTTTATTCCGTTGTAGTTAGCAAAACGGGGGATCAACCTTGTTTTGATA
AGTCGTTCAGAAGAAAAACTCAAAGCCACAGCTCAAGAAATTGGTAAGTG
CATGATTCATGATTTAACCCTGGGGTGCCCAAGGTAAGTGATCTACCATA
GGTACGGTCTTAATTAAGGGTACCTTTTTCAGGATTCCCAGTGGGTGGAT
AAAGTGAGAACAACAAAGTAGGGAAAATTGCTTAAAAATTTGATGGCTGA
CCATTCTCTCAAGAAAATGCACTGTAAGAGTGGAATTTTTGACCAAATTT
ACCCATTTTCTCTGCTCTGTATAGGTCAAATTTTAAAAGGCATCATTTTG
GGCTGTACATGCAGTACTTTTCGAGTGCAACCCCCACAAGGATTTTACAG
CTTCTTTGGTTTAGATTCAAAGTTTCTATCGTCACTGTTAATACCTCCCC
AGGGCTTATCAATAAATACCAAATTATCTTGAACTGTGCCACAGTTTGCT
CACTACTAATAAAATGTGATATACTATGTAACATACTACCCACACATTGA
AAGACAAGGAAAGATTTAGTTAAAAAATATCTAACCAAGCACAGCTTTCA
GTGCTCCTTAGCCAGTGCTGGCATCGTCTCCAACTAAGCCCTCAGATGTA
AATTCACTAGATAGCATAAAATAAATTATCTCTTTGTTTCAGGCGGGAAA
GTGGATGTAAAAACCATCTCTTATGATTTCTCCAACCCAGATGGTTATTC
AAAGATTGAAACAGAATTGAAAAACTTGGATATTGGTCTGCTTGGTAATA
ATATGACATTGTTTATAATTGCATTAAAAAAATGTGTTGAGTGAATTTTT
CGAATAAAAAGTTTTTCTTTTTTCTGTCTGTTTATATGTATTTTTCGGTC
TTCCCAAATTTTTCATTCCATTGGAAGATTTTTTTTTAAATCGTTATCTT
TTATGAAAATATAATTTTTTATACCTATTTTTCTTTGCAGTGAATAATGT
TGGAATGGGTTATGATCACCCTGATTTTTATCTCCACTATGACGAACAAG
TATATTTTCTTTAAAACAGTTTTAAATGTTTATTGTTGTTGTCCTTTATG
TTAATTTTCTCTTTTTATTTACACGAAAACAGTTGTTTGTGTGTGTATCT
TATTTTTTGGCAAAACCATAAAAATATGAACATCAAAATTCAAAGTTTGA
AAAATCCCTAGGAATATGATAGAAATGTGTCCAAAATAGAGCGAAATATT
ATTCCTGCGAAATGTGATTTTTTCGACCGGAAAAATTAGTTTCCTTTGAA
ATTAGTCCCCTGAAGGTATAATACTTAGTTGATAATGACACCCTTTATCG
TTTCATTCATTTTAGTACTTCGACAAGATGATTGACATCAATGTAACTTC
AGTATTGAAGGTTTGCCAAATCTCTTTTGAATCGTCTTGTTTTTTTAATT
CGTTTGTTCTTTGAATGCCACACCTATGAGACAGTTTTTTTTTGCAAGGC
CAATACTCTGTAACAAGTTGCCCACTACGAAAGCCAGCCCCATTAATTAG
AGTGAAAAGTCTGTCAGTGATGCCTCTAGCCTGGGGTCAACTTGAAGCCT
TTTGGATGATAAGTAAGTAGCCTGGAAATGTAGTGTAGTTCTCAATTTTT
AGCTTTTTCTTTGACAGAGTCTGTCAGATTCTAGTTGCGTGTTGAATGTT
AAAGGATTAGGTATTTGTTTTTATTTAAAAACAGGGTTTTTCAAATTAGC
TTTTTTGGGCTCTCATTTTTTCAACTCGAAGTAGCTATTGGGTTATTTGG
ATTTTAGTGTTTTTCTTTCAAAATGGAGGCCTCGTCAAGTGGTTCAAATC
TTCTCCATGTTCAGCCAGAAATAAACTCCAGACCATGCTATCCGTTGATT
CAAAAGAAGAAAAAGAAAACAATTAGCCATTGAAATAAAAATTTTCTAAT
TTTCAGATGACAAGAATTGTTTTGGATGGTATGGTACAGAGGTGTGAATC
TTTATAATTTCTTTTCATGTTCTATCTTTGAAATGTTTTGAGACAACAGA
CAGCCAAAGGTACTTCTTTCCCTTGTTATCCTGCTTCTCATCGCCTACTC
AAGTGGAAATGAGATGAAATGCAACAATTTTATGCAACAACGTTAACTAG
ATTTTGATTTTAGTGGTATGATCTTCTTTTCTATCGAGTTATATGAAAAA
TTGTAATTTCCATTTTCTTTTCAATTTAGGAAGAAGGGATTATTGGTTCA
TGTTTCATCTGCTTCTTCACTAATGCCAATTCCTTTCTTGTCTGGTTACA
GCGCTTCCAAGGTATCCTAACCAAGACTTTCCCATCAATATATTGGCACT
GCGCAGTATAAATTCATCAAATAAATAAAGTATTTTATCTGAAATCTTCA
CTGTGTGATATCTCGATTTAAGAGAAAACACATATCAAGCCTCATTCAAC
TGAGGTCCTTTCTTTTGCTCTTCTCACATTTGCAGTTCATTATTGCGTTG
GTAACCTGAGGGGAACAACGATAACTATGTGATTCTCTCTGTTCTCTTTT
TCCAGAGCTTTGTCAACAACTTTGGTGAATCTCTACACTATGAATACATG
GCAAAGGGAATCAAAAGTCAGGTTGGTAGACACGCTTTATATAAACATGA
GCTTTTCCCGAAACTTTTGATAATTTTGGGCATTTTTCCAGGGAAGATCT
GCACAATTATTTGGCTTGAAAAGGTTCGTCCATCTCCCTTTATGGACATT
AAAAGAAACAGCCAGTTTCCTCTTAAATTAAAGAAATTATTAAATTTGTG
TTGAGTCGACTTTTAAATATTATGGCTTCAAAGGTAGCTATGAAAATCAT
AATTGAACAAATTCTGAGTGATTGAGGAAAGTTTTTTATTTTGACTTTTT
CGGCAGGTTGTGTTCCCTTACTTCGTGGCTACCAAGATGTCAAAGATGCG
TTCTAATGGTTTTTTAGTTCCCAGTGCCGACCAGTACGCTTGTCAAATGG
TAAACGCCATTGGTTTAACGCCCACTATGGCGGGGTACTGGGCACACGAG
TTGTTCCTTGCTGTTTCCACCCTTCTCCCAAGATGGCTTGTGATTGGTCA
AACGCGCAAAATGATGGATGCTACTCGAAGAAGATGGGAAAAGAAGCAAC
AAGCCAAAAAAGATTGAGTCAGACGTAACCTTTGTTTGTATGTTTAGCCT
TTTGAAGCACTATCATGTTTATAATGAACACCTCTTTTGAGAAAGAAAGA
CATATAACACAAGTATGATGAGTTCAGATGAGTTGTTGATGAAAATCTAT
ACTGCATAAGAACAGAAAAAAGACACCTGTATAAGTGTGTTTTAATGTGT
TTCACTTTCAAATTCATCTTCTTCTTCAGGTTCATCAATACATTATGGAA
AGAATTTCGACCGCGGGATCTGTAAGATGCATGTAGTGGATTTGGCAATC
TAGTTTTTTGTACAATTAGGCATAAGTGAACTTTAGGTTAGCTATATGAT
CATCACGTTAACTATTATGATAAATGGAGGAATTATATGCTTTTGGCGGT
ATTGTTTGGCCATTTGGCCATTTTTTTACTGATTTTTAGATATTTAAATT
CTTGGATAGGTTATTTTGATTTCCGTCCACCATAACAGTTTTTTGTAAGA
AATTTTGCAAGAAAATATTATCAAATGATGTTCCAATTTATCACTTCATT
TATTCGATAATTTTGTTCTTTTCAAAATCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045424XLOC_045424Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073229-exon-scaffold_88-1575043694:412880..413099TCONS_00073229-exon-scaffold_88-1575043694:412880..413099Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:412432..412478TCONS_00073229-exon-scaffold_88-1575043694:412432..412478Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:408257..408332TCONS_00073229-exon-scaffold_88-1575043694:408257..408332Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:407556..407657TCONS_00073229-exon-scaffold_88-1575043694:407556..407657Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:407301..407359TCONS_00073229-exon-scaffold_88-1575043694:407301..407359Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:406940..406984TCONS_00073229-exon-scaffold_88-1575043694:406940..406984Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:406359..406393TCONS_00073229-exon-scaffold_88-1575043694:406359..406393Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:406039..406120TCONS_00073229-exon-scaffold_88-1575043694:406039..406120Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:405729..405794TCONS_00073229-exon-scaffold_88-1575043694:405729..405794Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:405176..405443TCONS_00073229-exon-scaffold_88-1575043694:405176..405443Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1575043694:404618..404970TCONS_00073229-exon-scaffold_88-1575043694:404618..404970Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:412880..413099TCONS_00073229-exon-scaffold_88-1510915933:412880..413099Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:412432..412478TCONS_00073229-exon-scaffold_88-1510915933:412432..412478Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:408257..408332TCONS_00073229-exon-scaffold_88-1510915933:408257..408332Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:407556..407657TCONS_00073229-exon-scaffold_88-1510915933:407556..407657Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:407301..407359TCONS_00073229-exon-scaffold_88-1510915933:407301..407359Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:406940..406984TCONS_00073229-exon-scaffold_88-1510915933:406940..406984Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:406359..406393TCONS_00073229-exon-scaffold_88-1510915933:406359..406393Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:406039..406120TCONS_00073229-exon-scaffold_88-1510915933:406039..406120Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:405729..405794TCONS_00073229-exon-scaffold_88-1510915933:405729..405794Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:405176..405443TCONS_00073229-exon-scaffold_88-1510915933:405176..405443Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1510915933:404618..404970TCONS_00073229-exon-scaffold_88-1510915933:404618..404970Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:412880..413099TCONS_00073229-exon-scaffold_88-1491911889:412880..413099Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:412432..412478TCONS_00073229-exon-scaffold_88-1491911889:412432..412478Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:408257..408332TCONS_00073229-exon-scaffold_88-1491911889:408257..408332Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:407556..407657TCONS_00073229-exon-scaffold_88-1491911889:407556..407657Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:407301..407359TCONS_00073229-exon-scaffold_88-1491911889:407301..407359Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:406940..406984TCONS_00073229-exon-scaffold_88-1491911889:406940..406984Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:406359..406393TCONS_00073229-exon-scaffold_88-1491911889:406359..406393Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:406039..406120TCONS_00073229-exon-scaffold_88-1491911889:406039..406120Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:405729..405794TCONS_00073229-exon-scaffold_88-1491911889:405729..405794Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:405176..405443TCONS_00073229-exon-scaffold_88-1491911889:405176..405443Clytia hemisphaericaexon
TCONS_00073229-exon-scaffold_88-1491911889:404618..404970TCONS_00073229-exon-scaffold_88-1491911889:404618..404970Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_88supercontigscaffold_88:404618..413099 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
60.633	62.5859	43.5596	31.3431	27.5676	14.8027	24.5829	29.8316	27.3195	24.9285	24.2336	22.8374	28.0963	26.3941	20.8934	18.0395	25.3938	21.7405	11.0519	8.89365	20.5897	20.2773	39.3502	34.1229	30.481	27.7792	27.8108	25.243	54.9136	44.3248
Blast
[Close]
BLAST of TCONS_00073229 vs. Swiss-Prot (Human)
Match: DHB12 (Very-long-chain 3-oxoacyl-CoA reductase OS=Homo sapiens GN=HSD17B12 PE=1 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 4.584e-71
Identity = 116/259 (44.79%), Postives = 173/259 (66.80%), Query Frame = 1 
Query:  214 WAVVTGATDGIGKAIAKQLAKRGINLVLISRSEEKLKATAQEIGGK--VDVKTISYDFSNPDGYSKIETELKNLDIGLLVNNVGMGYDHPDFYLHYDE--QYFDKMIDINVTSVLKMTRIVLDGMVQRKKGLLVHVSSASSLMPIPFLSGYSASKSFVNNFGESLHYEYMAKGIKSQVVFPYFVATKMSKMRSNGFLVPSADQYACQMVNAIGLTPTMAGYWAHELFLAVSTLLPRWLVIGQTRKMMDATRRRWEKKQQ 978
            WAVVTG+TDGIGK+ A++LAK G+ +VLISRS++KL   + EI  K  V+ +TI+ DF++ D Y KI+T L  L+IG+LVNNVGM Y++P+++L   +      KMI+IN+ SV KMT++VL GMV+R KG ++++SS S ++P+P L+ YSA+K+FV+ F + LH EY +KG+  Q V PYFVATK++K+R      PS + +    +  +GL     GY  H L  ++ + LP W+ +     M  +TR  + KK +
Sbjct:   52 WAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETRTIAVDFASEDIYDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVLPYFVATKLAKIRKPTLDKPSPETFVKSAIKTVGLQSRTNGYLIHALMGSIISNLPSWIYLKIVMNMNKSTRAHYLKKTK 310
The following BLAST results are available for this feature:
BLAST of TCONS_00073229 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHB124.584e-7144.79Very-long-chain 3-oxoacyl-CoA reductase OS=Homo sa... [more]
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