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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073216 ID=TCONS_00073216|Name=TCONS_00073216|organism=Clytia hemisphaerica|type=transcript|length=1025bp
gaaatatttctttaGCTATTTGTAATAAAATATGTCACAGAACTGGATGt
aatcaaaatttatcaaaGCTTACGAGGAAAATCAAATGTTTATATataca
aaataatatttttacagTTCCGTAGACTCTATAACCACTGTTCTTTGTCC
ATCTTGACTGTCGTTATTTATTGGCGCTGTTTGTCTTCTGTAGCAAAAGT
TAAGTTTGTAGCATAAGTGatgtttataaaattgtttaatCCTTCTGACT
TTCAAAATGTAAGCTAAGGCATTAAGTCCAGAACAAACGAAAAGTGGTAA
GTGAATGAATGGTGATATGTAGAATATTGACAAGAAAGAGGAAAGAAGTC
CATTATTTACCTCATAAACTATCATTAGAACGCCAAGTACTATATAGTAG
AGGCTTAACGGCAAAATACATATGATGTAGATCAACGAAATAGCATTTAA
AATTCCAACAGCtgttttgttatgttttctCATTCGAATTTCGGTGTCGA
TTTCACTTTTACAAGTACGCGATTgttttgttaaaatctttttagatGAA
TGGTTCAAACCAGTAACTGATATTACCATAGCTCCTATTGCAACGCCAGA
GAATAACCAGTGTGTGTAGTGAAGTATGTGGGAGGAATATGCGGGGTCGT
ATGTAAAAAATGCATATATAGACATTAAAACCATAAAGGCATTCCATATT
ATCATTGTGATGAAAACTGCTTTGCTCGTTACGACATAAAGAGGTTTCCT
TATTGCGAGATTTCTTAACAATGAAATCAATAAAAAGGTGCCTAGTCCTA
CTCCAAACGTGTAGATCGATGTCGCAAAACCAACACTAAAATTAGTACAG
GTCGATGCTGATACAAGCTCAAtgatagcgaaataaagcaacAATAGACA
CGTTAAGGCATCCGTTATTGACAAATAAATGTACAGTTTCTGAGGTATTG
TCAATTTCTTGTTGGTTTTTTTCAATCCAACAACTAAAGCAGTGTTTGTG
GCGGTTGAAAAGAGATAAATAAAAG Run BLAST on NCBI transcript from alignment at scaffold_88:142453..143477- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073216 ID=TCONS_00073216|Name=TCONS_00073216|organism=Clytia hemisphaerica|type=transcript|length=1025bp|location=Sequence derived from alignment at scaffold_88:142453..143477- (Clytia hemisphaerica)
GAAATATTTCTTTAGCTATTTGTAATAAAATATGTCACAGAACTGGATGT
AATCAAAATTTATCAAAGCTTACGAGGAAAATCAAATGTTTATATATACA
AAATAATATTTTTACAGTTCCGTAGACTCTATAACCACTGTTCTTTGTCC
ATCTTGACTGTCGTTATTTATTGGCGCTGTTTGTCTTCTGTAGCAAAAGT
TAAGTTTGTAGCATAAGTGATGTTTATAAAATTGTTTAATCCTTCTGACT
TTCAAAATGTAAGCTAAGGCATTAAGTCCAGAACAAACGAAAAGTGGTAA
GTGAATGAATGGTGATATGTAGAATATTGACAAGAAAGAGGAAAGAAGTC
CATTATTTACCTCATAAACTATCATTAGAACGCCAAGTACTATATAGTAG
AGGCTTAACGGCAAAATACATATGATGTAGATCAACGAAATAGCATTTAA
AATTCCAACAGCTGTTTTGTTATGTTTTCTCATTCGAATTTCGGTGTCGA
TTTCACTTTTACAAGTACGCGATTGTTTTGTTAAAATCTTTTTAGATGAA
TGGTTCAAACCAGTAACTGATATTACCATAGCTCCTATTGCAACGCCAGA
GAATAACCAGTGTGTGTAGTGAAGTATGTGGGAGGAATATGCGGGGTCGT
ATGTAAAAAATGCATATATAGACATTAAAACCATAAAGGCATTCCATATT
ATCATTGTGATGAAAACTGCTTTGCTCGTTACGACATAAAGAGGTTTCCT
TATTGCGAGATTTCTTAACAATGAAATCAATAAAAAGGTGCCTAGTCCTA
CTCCAAACGTGTAGATCGATGTCGCAAAACCAACACTAAAATTAGTACAG
GTCGATGCTGATACAAGCTCAATGATAGCGAAATAAAGCAACAATAGACA
CGTTAAGGCATCCGTTATTGACAAATAAATGTACAGTTTCTGAGGTATTG
TCAATTTCTTGTTGGTTTTTTTCAATCCAACAACTAAAGCAGTGTTTGTG
GCGGTTGAAAAGAGATAAATAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073216-exon-scaffold_88-1575043694:142453..143477 | TCONS_00073216-exon-scaffold_88-1575043694:142453..143477 | Clytia hemisphaerica | exon |
| TCONS_00073216-exon-scaffold_88-1510915933:142453..143477 | TCONS_00073216-exon-scaffold_88-1510915933:142453..143477 | Clytia hemisphaerica | exon |
| TCONS_00073216-exon-scaffold_88-1491911889:142453..143477 | TCONS_00073216-exon-scaffold_88-1491911889:142453..143477 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_88 | supercontig | scaffold_88:142453..143477 - |
Blast
The following BLAST results are available for this feature:
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