TCONS_00073188 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073188
Unique NameTCONS_00073188
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length193

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073188 ID=TCONS_00073188|Name=TCONS_00073188|organism=Clytia hemisphaerica|type=transcript|length=193bp
AAAAGCTTTAGAGTATAATGATGAATCATTTTGATGATCTAAAAAACTCT
TACCAAGATAATCTAATttccattgatttcaaattaaatgaaaaaactaa
aaataatgctAAACTGTATATATTCCAAAGAGGAAACTTGGATAAAAACA
TGAAGCACAAGCAAAACCAAGTTTACATCAAATTCATTTGATA
Run BLAST on NCBI

transcript from alignment at scaffold_87:158403..158595

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073188 ID=TCONS_00073188|Name=TCONS_00073188|organism=Clytia hemisphaerica|type=transcript|length=193bp|location=Sequence derived from alignment at scaffold_87:158403..158595 (Clytia hemisphaerica)
TATCAAATGAATTTGATGTAAACTTGGTTTTGCTTGTGCTTCATGTTTTT
ATCCAAGTTTCCTCTTTGGAATATATACAGTTTagcattatttttagttt
tttcatttaatttgaaatcaatggaaATTAGATTATCTTGGTAAGAGTTT
TTTAGATCATCAAAATGATTCATCATTATACTCTAAAGCTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045400XLOC_045400Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073188-exon-scaffold_87-1491911889:158403..158595TCONS_00073188-exon-scaffold_87-1491911889:158403..158595Clytia hemisphaericaexon
TCONS_00073188-exon-scaffold_87-1510915933:158403..158595TCONS_00073188-exon-scaffold_87-1510915933:158403..158595Clytia hemisphaericaexon
TCONS_00073188-exon-scaffold_87-1575043694:158403..158595TCONS_00073188-exon-scaffold_87-1575043694:158403..158595Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_87supercontigscaffold_87:158403..158595 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073188 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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