TCONS_00073164 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073164
Unique NameTCONS_00073164
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2417

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073164 ID=TCONS_00073164|Name=TCONS_00073164|organism=Clytia hemisphaerica|type=transcript|length=2417bp
TCATTCTCGATTATGaatgcattttggcgggacatTCATGACGACAGCCA
CTTGCTTATTAATTTAAGATTAACGCTTGgaaagaaaatagacaaaCAAT
GTATCGGTTGAACACTGGAAGCAAAGACTTGCTAAAGATTGCCTTCGTAG
TATTTGCAATGATAGTGATGTACCACGAAGTCTTTCATTCGAACGCCGTA
TCAAAAGTGTTAACCAACAAACGTGACACAGTTACAGTTGCCGTTATCGA
AGAAGAACAGAGAGTTCAAATCTCACTCCCAAAGAATTCTGCAAAAGCTG
CAAAACTGAAAGAAAGTATTAAACAAATACTTAAAAATCTAAACCAGCAA
AAATTGATCCTGTCAACAAATAAAAAAGTGAAtgtgaaaatggtcaaaac
acCGAAAGCTCCAAGCACAACGACAACAACGGAAGTACAGAAAACGATGA
AAATACCGAAAACGACGAAATTACCGACGACGAAGAAATTACCGACAACA
ACTAAAACTCCGACCACATCTCGGGATTACCTCGGTGTAATTTCATACAT
CCCAAATTCCGAATCTCACGCCAGACAATATTTGGCTTTCGCATATGCAT
CATGGAGACATATCACAGACAAAGAGGAGAAACTTTTAGACAAAAACATT
ACAAATGAGTTGCGCAATAGCATTGATCTTCTTGCATTCTGTCACCCTAA
TATTTGTCCCCACCTTGAGCAATTCTGCACTAAAATCACCAACATCTCAA
AAGTCCATAATGCTGTCAAACAAAAATGCTGGGCCGTTGAACAACCCTTT
GAGACGGATATCCGGTACGGCCCGCTAAACTCATACATCATGTTTAAGAG
AAGAGACGTCACTGAATTGtcaaaaaagtataaatatcTTCTCCGCACGG
ATAACGATGTTTTTATAAGCCCtgctttgtttttattaaaaccgACCAAT
TTCTTGTTTGGCCGTGGAGGTTATAGTGATCCGTTCAATATGAAACGATT
GAAAGAAGTTTCTAAGCGACTTGGAATGACCCATCGTGGACGACACGGTA
TTGGCTCAACTTGGTGCGCCGAAACAAAACAGTTTATCGCCATCGCCAAT
AAGACTTACGATACAACCCGCTATGTTTGGTTGAACGAATTCAACCCAAA
GGCTCAAGGCTTggaaaccatcaattttactaAAAATATCGAGGGTGAAT
GGATCCGCTGGTGGAGACCAGTTTCTTTGCTATATGGTGGAGAAATAGCG
ATCAACCACATGCTACCACAAATTTCCGACCAAAATCAAGGAAGATTTGA
TGATTCCTCATGCTCAACAGAAAGTATTTGGAAAGCATATCATATTCATT
GCTGGCATAGTCCTTGTCATTTCTCAAAATTCGAATTCGATAATTTCATA
AATAACCTTTTACATGGTACGAAAGATTTGAGCAATAAATTGAGTAAAGA
ACTGGTGAGAAACAGTTATGACAAAGACACCAGAAATATGACAATGCAAC
AATTTTCTTCTTATATCGCTTATAATGCTATTGGAAAATATTTGGGAAGA
TATTTCCAGAATTGACAAGTATATGGGTTAACATGCGTGAAATGAGATTT
GCCCGGGGGGTattacccttgtcgaccgacggggatgCTCCGCAAATTTG
TTTTCCGTACATGtacgggagtatcatcgacggtcgggagtatttCATTT
TTACGGTCGAGAGTATCATTGACGGTCAGGAGTATCATTGACGGTCAGGA
GTATCattgacggtcgggagtatctcatcttgaAGGTCGGGAATATCATC
GACGGGCCGGAGTATTTTAAACTTATCTTAAaccttgaaatatcgacccg
accggggcTCGAACCCACCAAATCAAAGAGTTTCCGCTGAGCGTTTCCGt
tgaaatacttatagaatgacaaaaagacgggggtaatgttattataatat
gggtaaaattgctccttttttaacctgactgaaattcgagccatTAATAG
Cagccctgcggggcccaaggcgccgagtatgcaaccggcacagtgacaag
ccatTACTAGGAACTCTGACCTAGgctattccaaacaacaaaaccaaaca
acaaagatgagatactcccaaccgtcgatgatactcccgtccatgtacgg
aaaaaaatttgcgagtgctccgctgaggttcaaaaaatggaccctacgtg
ggactcgaaatttgcgaaaatgtgaccctgaatgggactgaaatttcaaa
atgttctcaaattttctactttttccaaaattttaaaaataggcacccta
cgagggactgattttttattgtggtgtttttgcgaccctacttggggctc
gtggaggttaaaaaaggtaccctgaccagcgaagcatccccgtaacccat
cttgtcctagtaccccc
Run BLAST on NCBI

protein sequence of TCONS_00073164-protein

>TCONS_00073164-protein ID=TCONS_00073164-protein|Name=TCONS_00073164-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MYRLNTGSKDLLKIAFVVFAMIVMYHEVFHSNAVSKVLTNKRDTVTVAVI
EEEQRVQISLPKNSAKAAKLKESIKQILKNLNQQKLILSTNKKVNVKMVK
TPKAPSTTTTTEVQKTMKIPKTTKLPTTKKLPTTTKTPTTSRDYLGVISY
IPNSESHARQYLAFAYASWRHITDKEEKLLDKNITNELRNSIDLLAFCHP
NICPHLEQFCTKITNISKVHNAVKQKCWAVEQPFETDIRYGPLNSYIMFK
RRDVTELSKKYKYLLRTDNDVFISPALFLLKPTNFLFGRGGYSDPFNMKR
LKEVSKRLGMTHRGRHGIGSTWCAETKQFIAIANKTYDTTRYVWLNEFNP
KAQGLETINFTKNIEGEWIRWWRPVSLLYGGEIAINHMLPQISDQNQGRF
DDSSCSTESIWKAYHIHCWHSPCHFSKFEFDNFINNLLHGTKDLSNKLSK
ELVRNSYDKDTRNMTMQQFSSYIAYNAIGKYLGRYFQN
Run BLAST on NCBI

transcript from alignment at scaffold_87:111460..123067+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073164 ID=TCONS_00073164|Name=TCONS_00073164|organism=Clytia hemisphaerica|type=transcript|length=11608bp|location=Sequence derived from alignment at scaffold_87:111460..123067+ (Clytia hemisphaerica)
TCATTCTCGATTATGaatgcattttggcgggacatTCATGACGACAGCCA
CTTGCTTATTAATTTAAGATTAACGCTTGGTAGgtttcttttatatttat
aaGTATTTAGTTTTATTGGTTGTTTTCTGTAGaggatatttatttttgag
ttctactttgttttgttattttggtAATAGAATTTggtgtatattttttt
tttttaatttgaataatTGGTGGTCTGTTTTTGTAAGTAATTGAATGATT
AGTTTTGGAGTTATAAGGTTTGCTTATTCTGCGATCTCAGTTTGCTTAAG
TCCGGTTTGCTCtttttcgaaaacaaagaaTAATTGTGGTAAAttcgagg
ggcaaatcactcaGAAAATGgtggttagtgtaaaacgcaggtcacaggtc
atctTAAATTTCTAAGTTTATCAAATAAGTAATTCTGAATGGAATGATGT
CTCTTGGGTCGTTATGTAGTTAAATAAACGAAGTTAAATTGAAGCGatta
tataataataataccCTTAGGTGATTATTTAATTAGATTAATTAATGAAT
TATGAAGTTTGactattttgatttcttttttttggcgCTCATAGACagtg
ttgttataaaaaaatttaaggaaGGTTATGTTTTGGATTTAAGGCTTGAT
GTGATTTTTATGATATTTAAGAGTAGTAGTTattctattaaaaaaattta
tctttataaaaatattaggtTGAAATATTACTTGGTGAGAGCGAGTCTAA
ATTTGTAAtagataaaagatttttttgttattgtttttatggttttatgg
tttgatgtgaGAATAtgttagaaaaagaaaaagagaaaaatcgaagcatt
tttagcatttttaataaaatttttaggTAAATTTATGAGGTGTATAGTTT
CAATTGAGTATAAAAAGATAGTTCAAGCATAAATGTACAACATATTATGC
CTATATACAGTATGGCGGGTAACTCTGTTACATTTGGAAATAATCCAAAC
ATAAAACACATGAAATTTTATAAAAGGTTGTTGCTGTTTTCACAGCATGC
TGTCAGTGGTTACCAGTTCTTTGATGTAATGTGTTTTTTAAGTGTTTTTC
TTATCCCTGTAGAgttaatgaatctaaggaaattccctttttataccaca
agtagttattaagcgctcttcataggttaaaaatattactctactcaaag
cattcgaacagttatgttgcagtatcttcagattcacgctttttatagga
aaaaccaatAAGTTATATAATATTCTGGCTCGGCTGCTCTCaattttata
tgagtttttcaggcttaaatgtaaATACTAATAAAAATGGAAACCTGTAC
ttttcagtaatttctgaaattttgggctcagattcttcttaatttgttct
taggttttggccaaattttagcctcgtattcttatgaaatattgttctta
taagacaATTGttcgtgtaagacaaggcacggatgtcactctaaatagac
tgtaaatcactcccttgacacatttgttagcatttgaaagaattttgtct
caggtGAGAGGttactcttaacaaaaattactgtatgGCTAAGCTCATTC
CTTTTGAAcacaaattcaactctatgtgttcgttttgctgcggtggcacc
ttatcgttttgctgcggtggcacctgatcgttttgctgcggtggcacctt
atcgttttgctgcggtggtaccttaatgaaagttatagctagttttattt
caaagggttgaattttaattttcaaaataactcGCTTTTACCAAGCGAAT
TTTATTAAGGTAAATTGTTTAATATGATTGTTTTAGTAATTTTCATTTGG
TTATAATTCGGTTTGCACTGACAGCTAGAGTACATACATACCCTTTGGAT
AACTGTTTTAAAAAACAGTCCTTTATTAGATTTGATTAAAATTAAGTTTG
TTTTAAGTTGAAGATGTCTCAAATAAAAGATTGAttaattaataaataaa
tagacTTTCGACTCTTCCAGTTTTTCTggtataaatttttttaaattgtt
ttggtataaaatgtctaaagttttctctttctttttctgatataaagttt
tttcttttcttatgaGTGCTAAGGAACTACTTACTTGTACTTGCTGGTTT
AGCCAAATCGTCCATTTGACAACTTTTGGCGGTTCGTCTGGGATGAACCA
TGTCCCTTTCGTTTTAGTTCTTCTTTGTAGAAATTGTCTTTTGTCAACCC
GGGAGATTTCATCACTTTGTCTTCTAGTGTCTCAGTTGGTCGACCAATTT
TCGTACGTTTGTTTACGTTGAACAagagtcttttttttattaaacatTGG
TTTGGTTGTCGTGCCAAGTGTGCGAGATAActtgattgtttgttttcata
cGAAAGTTCCGATATTATCGGTTCGACAAATTCGTAGAATGTCTTGGTTT
GTCATAACAAACCGATATTCCTCAGTCTTGGAGTCATTTCGTACAAGTTT
CCTAAGCATACCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgtcc
gagccgaaaatcgaaaaccgaccctttgagagacaaaattttggtgattt
tgggaccctttgagagactttttcctaaattttggttcattttttccaaa
tttaattttgattttcaccaaattttggtcaaaatttttggaaatcgtga
cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNATACCAACATATACAGAATTTATTATATTCATTTCTGCAGTACT
CACATTCCAAGTCTGGCAAGAATAGGTCCGTCTAGTGCGAACCATTGAAT
TGAAAATCAGTactctttttttcaaatgaattttATAATTCGTTAATTTA
GTAATCAGTTCGTAAAATTTAGCTTCAGCTAGTGATAAACCAAGGCTTAT
TTTTGCCCTGCCCGTCGATTGTCCGTCATATTTTATCTCATCTCCGAGGT
ATCGAaatgttttaacgtttttgatcACCAGATTCTGTAGTTTAGCAATA
GATTTAGGGTACGTCGACTGGTAATGTTCTTTGATGTCTTTGATGTATTC
AAAGTTGAAGATCatactttttgttttcttgatgtTAATACTCAGTTCGT
ATTTTGAGAATATCTCATGTAAAAGAAAGAGACCCTTTTGAAGATTGACT
GCACTTTCGGAAAATAGTTCTAAATCGTCCGCATAACCCGACCAGTCTGC
GTCATGATCTCCTCATCTTTCGCTCTCTCCTTTCGGGTGGTTGTAGTTGA
ACGTATACGATATTTCAGTTTTAGAGAATTTATTTGGTGAGTTTGACATT
CATTTTCATAAACTCTCGTAACGTAGTCGATGTATAAATTATACAAAAGC
GGGGACTCTGGACCACCTTGACGAACACCAgttaagatttcaaaaattta
aaaatgttccTCTCCCCGAACGAAATCTTTGTTGCTGGTCCATTAGCGTT
TTATCGTACTACGACTTGATTCTATTTATAATTACTATCACGAGAATCTT
ACATAGGACTGAGCCGACTTGTAACGCCCTATAGGTTTTAGGGTCAGATG
GACTTCCCTTTGAGGCTTCTTTCCATAGCGCAACTAGTTTGGAATGTCCA
AGAATTCGGAATTGTCTGTGATTCCCAAATATCATTGagaagattatgga
cttcatttaTAAGTTCGACAGAGTTAGTGGCGTATTTGAAAAATTCGGAA
GGGGCATCTGTTGACGCCTTTccatttttcatcgatttcagCACTTTCTT
TATTTCCTCGGGTGTCGGTGGATTTTGGTTGATATCGTCTTCATTGTCCT
GAAGCATTTCAATGAAGGATGGGACAGCTTCGTGGTGAAGTGGTTATAAA
AATAGTTTCTGAGTTTTTCGGAGTCACATTTGTTTTTCCTTCGAACGTTT
TGGAACGAAGAATTAACATTTTAAATCTTTCTGAACAGTTGCATGCTGGT
TTATCGTCTCGGCTTCGCGTTTTAGCTTTTCGTTACGTAGGAATTTCACA
CGATTCTTTATCTTCCTGGTAGCTTTCTTGAATTCTTGAGTACCTTTCAA
AAGAGCCATTCTGTTTTCAAGAAGTCTATTGAGGCAATCATCGTCTTCAG
AGTTCTCTTTGGATTCGTCACGATTTTGTTTCAGTGGACCATTGATTCAT
ATTTTCgttcgttcttttcttttatttctttttcatataATAATATCGCA
CCAACgattattattttaattttcaacacAAATCGTAATAAAATTCGATT
CTATCGTTCTATCCGGGGATGCTTAGGGAAAATAAGTGTCACTTATGTGC
GAGGCATAAGGGTAACTTTTTTACACCCTCGACAATCTATTGAACGAAAT
TACAATTGAGTGTATGAGAGGGTggcaaaattacaaaatcaaaatcgaaG
ATTGACTCGCACACAGAGTAATGAATTTTCCAGGCTCCCCCAAGTAGGGa
cgctgaaggctcaaaattagataaaattagctacaatcagtgccaaaata
cttggcacaaaagggaaattccccaagaaattttataaccacaaacaagg
gtagagttttaaggACTTAAAGcctaggaccttaggatctaaggatcaaa
aagttcaaaaatgatcCGGTAttgcttgaaatatagcctagaaaccaata
aatccctcccaaatctaaatattcgatgaaatcaagtttaaggcccgaaa
ttgacattcttgctcgaacttcaatttttgaaaaatggtgaaatagcaaa
aattgccaatattttatggcactgattgtaggaatttgagaaaaaatctc
aatTACTTAAAAGTAGGGAAGCTGAAGTTTCCTAAGTCTCTCCACTTCCA
CTGGGCTTGTTTTCGTAATTTAGATTGAAGATTTAAAAATCCATAAGTTG
CCATAAAGCTTAATTCCATTGCTAGATTGATACTCACCGATATTAAGACA
AagagtaccgtgaaaagcacaggccgaACTTAAGGTCGGCAAATCGTCAT
ATTCTTTTCGTGCATTGCCAAATTCGAAGTTCACTAGCTTTAAATAAGAT
CCTCACGGTGTACGAAGAGGCTCTATTTTTTGGCACATTTAATGGCTAAA
ACAGAGACAAaggtttttgcttaaaattctgAAATCGACAGATATGTGAG
ATTTAGTAGAAATAACACTTTGAGTGTTGAGTGACTTATTTTTTCGTGTT
CTAGGAATCCTTTTGAAGAAACTCAATGTCGGACCTGACTGGCATTATCG
AGTAGAAAATTACGGAGTCTTGTAAAATGTTTCAGGAGGTCTCTttctag
aaaaagaaaattaacctTCTCTCTTGAATTTATTTTAACAggaaagaaaa
tagacaaaCAATGTATCGGTTGAACACTGGAAGCAAAGAANAAAAAATCT
CAATTACTTAAAAGTAGGGAAGCTGAAGTTTCCTAAGTCTCTCCACTTCC
ACTGGGCTTGTTTTCGTAATTTAGATTGAAGATTTAAAAATCCATAAGTT
GCCATAAAGCTTAATTCCATTGCTAGATTGATACTCACCGATATTAAGAC
AAagagtaccgtgaaaagcacaggccgaACTTAAGGTCGGCAAATCGTCA
TATTCTTTTCGTGCATTGCCAAATTCGAAGTTCACTAGCTTTAAATAAGA
TCCTCACGGTGTACGAAGAGGCTCTATTTTTTGGCACATTTAATGGCTAA
AACAGAGACAAaggtttttgcttaaaattctgAAATCGACAGATATGTGA
GATTTAGTAGAAATAACACTTTGAGTGTTGAGTGACTTATTTTTTCGTGT
TCTAGGAATCCTTTTGAAGAAACTCAATGTCGGACCTGACTGGCATTATC
GAGTAGAAAATTACGGAGTCTTGTAAAATGTTTCAGGAGGTCTCTctcta
gaaaaagaaaattaacctTCTCTCTTGAATTTATTTTAACAggaaagaaa
atagacaaaCAATGTATCGGTTGAACACTGGAAGCAAAGACTTGCTAAAG
ATTGCCTTCGTAGTATTTGCAATGATAGTGATGTACCACGAAGTCTTTCA
TTCGAACGCCGGTAAGTTGGTATTTGTGTCCAGAAGGCTtgtgtctcttt
ttattgttaaaagatctTACGTACCGAAAtcgcaaaaattttgatcatgt
gattagaaaatagagcAATCCAAAGAGGacattttggtaacgtgataaaa
agtatgcaaatcgcaacttttcttttgtttgtaacaaaagaaaattgaac
aaaaagctaaaacaatacaggTGCCAGACCGgagtttttataatgactat
gcttTTACAGTGAAGCCTCTATTGATCTTTATAGTATAGCTCGAGTAGGT
TGTCTGGTCCCTTAAGTTAGcaattacacccccttctcacagacccactg
ggaccccttcccactggaaaaattagccaaaatgtcatcattgaaaataa
tcaaataaaccaatccttaATGGAAAATATTTaccatttttcccatcccc
aatGAATGAAAGAATCCTACCAGGACTTTGGGAAGAGGGTGTGCAACCCA
GTATAGAATATGTAACAAATATTCTTCATCCAACTCTCCACGCCTGTTTA
ACCATGAatttaaagccatttttttcaaaaagtcttaATGTTAATGTTCT
TGATTTAGATGAAATCTAAATTAGATTATAACATCATTTGCAATTTCGCT
TGTTATATTGGTTGCTTGCTGCAaagcataggcgtagcgagataccctgc
aaaatttaccgatgagagcggtttttacgacactgttattgtctttgttt
tatcaaaaggtaataaatatgtcataaacgtctgcactccctcgtaagtt
ttgcagggtatctcgctacgcctatgcaaAGCAATCACATTGAAAATCAG
GATCAAAATAAACATAACACAAGAAACGGGAAATAACGCCCATTCTGTTG
CGAGCCACTTAATTGAGGAATTTGTTCCAATCCTTAATGATTTGCTATTA
GATTAAGGTCTATTTTCGTGTTGTCATTTTGATAAACTCGAAAGAATtcc
aaagatttcaaaattctttgatATTTAGCTCAATCGTcacatactcttag
gttccaaataaacaggccctcccccgcttgttaatttttcgaaaattttc
caacctccCGGACCTTATTAGTACCCCCCGGTTATTAATTCTTAAGAATG
TTTCTGCTGTTAAGAgaagtcagaaaatcagaaaaagccccttattttgc
tctgaATAGCCTGATTTTACCTAATTTTTGGTTTTACAGAAGTACAAGGT
AATTAGGGCAATTAGGTCTCAACGTTTATCAAAATCTCGAAAATCTTCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCC
CGAACCTAAGAGTAACGAAGTCTTTATAATATATTTCAGTATCAAAAGTG
TTAACCAACAAACGTGACACAGTTACAGTTGCCGTTATCGAAGAAGAACA
GAGAGTTCAAATCTCACTCCCAAAGAATTCTGCAAAAGCTGCAAAACTGA
AAGAAAGTATTAAACAAATACTTAAAAATCTAAACCAGCAAAAATTGATC
CTGTCAACAAATAAAAAAGTGAAtgtgaaaatggtcaaaacacCGAAAGC
TCCAAGCACAACGACAACAACGGAAGTACAGAAAACGATGAAAATACCGA
AAACGACGAAATTACCGACGACGAAGAAATTACCGACAACAACTAAAACT
CCGACCACATCTCGGGATTACCTCGGTGTAATTTCATACATCCCAAATTC
CGAATCTCACGCCAGACAATATTTGGCTTTCGCATATGCATCATGGAGAC
ATATCACAGACAAAGAGGAGAAACTTTTAGACAAAAACATTACAAATGAG
TTGCGCAATAGCATTGATCTTCTTGCATTCTGTCACCCTAATATTTGTCC
CCACCTTGAGCAATTCTGCACTAAAATCACCAACATCTCAAAAGTCCATA
ATGCTGTCAAACAAAAATGCTGGGCCGTTGAACAACCCTTTGAGACGGAT
ATCCGGTACGGCCCGCTAAACTCATACATCATGTTTAAGAGAAGAGACGT
CACTGAATTGtcaaaaaagtataaatatcTTCTCCGCACGGATAACGATG
TTTTTATAAGCCCtgctttgtttttattaaaaccgACCAATTTCTTGTTT
GGCCGTGGAGGTTATAGTGATCCGTTCAATATGAAACGATTGAAAGAAGT
TTCTAAGCGACTTGGAATGACCCATCGTGGACGACACGGTATTGGCTCAA
CTTGGTGCGCCGAAACAAAACAGTTTATCGCCATCGCCAATAAGACTTAC
GATACAACCCGCTATGTTTGGTTGAACGAATTCAACCCAAAGGCTCAAGG
CTTggaaaccatcaattttactaAAAATATCGAGGGTGAATGGATCCGCT
GGTGGAGACCAGTTTCTTTGCTATATGGTGGAGAAATAGCGATCAACCAC
ATGCTACCACAAATTTCCGACCAAAATCAAGGAAGATTTGATGATTCCTC
ATGCTCAACAGAAAGTATTTGGAAAGCATATCATATTCATTGCTGGCATA
GTCCTTGTCATTTCTCAAAATTCGAATTCGATAATTTCATAAATAACCTT
TTACATGGTACGAAAGATTTGAGCAATAAATTGAGTAAAGAACTGGTGAG
AAACAGTTATGACAAAGACACCAGAAATATGACAATGCAACAATTTTCTT
CTTATATCGCTTATAATGCTATTGGAAAATATTTGGGAAGATATTTCCAG
AATTGACAAGTATATGGGTTAACATGCGTGAAATGAGATTTGCCCGGGGG
GTattacccttgtcgaccgacggggatgCTCCGCAAATTTGTTTTCCGTA
CATGtacgggagtatcatcgacggtcgggagtatttCATTTTTACGGTCG
AGAGTATCATTGACGGTCAGGAGTATCATTGACGGTCAGGAGTATCattg
acggtcgggagtatctcatcttgaAGGTCGGGAATATCATCGACGGGCCG
GAGTATTTTAAACTTATCTTAAaccttgaaatatcgacccgaccggggcT
CGAACCCACCAAATCAAAGAGTTTCCGCTGAGCGTTTCCGttgaaatact
tatagaatgacaaaaagacgggggtaatgttattataatatgggtaaaat
tgctccttttttaacctgactgaaattcgagccatTAATAGCagccctgc
ggggcccaaggcgccgagtatgcaaccggcacagtgacaagccatTACTA
GGAACTCTGACCTAGgctattccaaacaacaaaaccaaacaacaaagatg
agatactcccaaccgtcgatgatactcccgtccatgtacggaaaaaaatt
tgcgagtgctccgctgaggttcaaaaaatggaccctacgtgggactcgaa
atttgcgaaaatgtgaccctgaatgggactgaaatttcaaaatgttctca
aattttctactttttccaaaattttaaaaataggcaccctacgagggact
gattttttattgtggtgtttttgcgaccctacttggggctcgtggaggtt
aaaaaaggtaccctgaccagcgaagcatccccgtaacccatcttgtccta
gtaccccc

Coding sequence (CDS) from alignment at scaffold_87:111460..123067+

>TCONS_00073164 ID=TCONS_00073164|Name=TCONS_00073164|organism=Clytia hemisphaerica|type=CDS|length=2934bp|location=Sequence derived from alignment at scaffold_87:111460..123067+ (Clytia hemisphaerica)
ATGTATCGGTTGAACACTGGAAGCAAAGACTTGCTAAAGATTGCCTTCGT
AGTATTTGCAATGATAGTGATGTACCACGAAGTCTTTCATTCGAACGCCG
TATCAAAAGTGTTAACCAACAAACGTGACACAGTTACAGTTGCCGTTATC
GAAGAAGAACAGAGAGTTCAAATCTCACTCCCAAAGAATTCTGCAAAAGC
TGCAAAACTGAAAGAAAGTATTAAACAAATACTTAAAAATCTAAACCAGC
AAAAATTGATCCTGTCAACAAATAAAAAAGTGAAtgtgaaaatggtcaaa
acacCGAAAGCTCCAAGCACAACGACAACAACGGAAGTACAGAAAACGAT
GAAAATACCGAAAACGACGAAATTACCGACGACGAAGAAATTACCGACAA
CAACTAAAACTCCGACCACATCTCGGGATTACCTCGGTGTAATTTCATAC
ATCCCAAATTCCGAATCTCACGCCAGACAATATTTGGCTTTCGCATATGC
ATCATGGAGACATATCACAGACAAAGAGGAGAAACTTTTAGACAAAAACA
TTACAAATGAGTTGCGCAATAGCATTGATCTTCTTGCATTCTGTCACCCT
AATATTTGTCCCCACCTTGAGCAATTCTGCACTAAAATCACCAACATCTC
AAAAGTCCATAATGCTGTCAAACAAAAATGCTGGGCCGTTGAACAACCCT
TTGAGACGGATATCCGGTACGGCCCGCTAAACTCATACATCATGTTTAAG
AGAAGAGACGTCACTGAATTGtcaaaaaagtataaatatcTTCTCCGCAC
GGATAACGATGTTTTTATAAGCCCtgctttgtttttattaaaaccgACCA
ATTTCTTGTTTGGCCGTGGAGGTTATAGTGATCCGTTCAATATGAAACGA
TTGAAAGAAGTTTCTAAGCGACTTGGAATGACCCATCGTGGACGACACGG
TATTGGCTCAACTTGGTGCGCCGAAACAAAACAGTTTATCGCCATCGCCA
ATAAGACTTACGATACAACCCGCTATGTTTGGTTGAACGAATTCAACCCA
AAGGCTCAAGGCTTggaaaccatcaattttactaAAAATATCGAGGGTGA
ATGGATCCGCTGGTGGAGACCAGTTTCTTTGCTATATGGTGGAGAAATAG
CGATCAACCACATGCTACCACAAATTTCCGACCAAAATCAAGGAAGATTT
GATGATTCCTCATGCTCAACAGAAAGTATTTGGAAAGCATATCATATTCA
TTGCTGGCATAGTCCTTGTCATTTCTCAAAATTCGAATTCGATAATTTCA
TAAATAACCTTTTACATGGTACGAAAGATTTGAGCAATAAATTGAGTAAA
GAACTGGTGAGAAACAGTTATGACAAAGACACCAGAAATATGACAATGCA
ACAATTTTCTTCTTATATCGCTTATAATGCTATTGGAAAATATTTGGGAA
GATATTTCCAGAATTGAATGTATCGGTTGAACACTGGAAGCAAAGACTTG
CTAAAGATTGCCTTCGTAGTATTTGCAATGATAGTGATGTACCACGAAGT
CTTTCATTCGAACGCCGTATCAAAAGTGTTAACCAACAAACGTGACACAG
TTACAGTTGCCGTTATCGAAGAAGAACAGAGAGTTCAAATCTCACTCCCA
AAGAATTCTGCAAAAGCTGCAAAACTGAAAGAAAGTATTAAACAAATACT
TAAAAATCTAAACCAGCAAAAATTGATCCTGTCAACAAATAAAAAAGTGA
AtgtgaaaatggtcaaaacacCGAAAGCTCCAAGCACAACGACAACAACG
GAAGTACAGAAAACGATGAAAATACCGAAAACGACGAAATTACCGACGAC
GAAGAAATTACCGACAACAACTAAAACTCCGACCACATCTCGGGATTACC
TCGGTGTAATTTCATACATCCCAAATTCCGAATCTCACGCCAGACAATAT
TTGGCTTTCGCATATGCATCATGGAGACATATCACAGACAAAGAGGAGAA
ACTTTTAGACAAAAACATTACAAATGAGTTGCGCAATAGCATTGATCTTC
TTGCATTCTGTCACCCTAATATTTGTCCCCACCTTGAGCAATTCTGCACT
AAAATCACCAACATCTCAAAAGTCCATAATGCTGTCAAACAAAAATGCTG
GGCCGTTGAACAACCCTTTGAGACGGATATCCGGTACGGCCCGCTAAACT
CATACATCATGTTTAAGAGAAGAGACGTCACTGAATTGtcaaaaaagtat
aaatatcTTCTCCGCACGGATAACGATGTTTTTATAAGCCCtgctttgtt
tttattaaaaccgACCAATTTCTTGTTTGGCCGTGGAGGTTATAGTGATC
CGTTCAATATGAAACGATTGAAAGAAGTTTCTAAGCGACTTGGAATGACC
CATCGTGGACGACACGGTATTGGCTCAACTTGGTGCGCCGAAACAAAACA
GTTTATCGCCATCGCCAATAAGACTTACGATACAACCCGCTATGTTTGGT
TGAACGAATTCAACCCAAAGGCTCAAGGCTTggaaaccatcaattttact
aAAAATATCGAGGGTGAATGGATCCGCTGGTGGAGACCAGTTTCTTTGCT
ATATGGTGGAGAAATAGCGATCAACCACATGCTACCACAAATTTCCGACC
AAAATCAAGGAAGATTTGATGATTCCTCATGCTCAACAGAAAGTATTTGG
AAAGCATATCATATTCATTGCTGGCATAGTCCTTGTCATTTCTCAAAATT
CGAATTCGATAATTTCATAAATAACCTTTTACATGGTACGAAAGATTTGA
GCAATAAATTGAGTAAAGAACTGGTGAGAAACAGTTATGACAAAGACACC
AGAAATATGACAATGCAACAATTTTCTTCTTATATCGCTTATAATGCTAT
TGGAAAATATTTGGGAAGATATTTCCAGAATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045378XLOC_045378Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073164-proteinTCONS_00073164-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073164-exon-scaffold_87-1491911889:111460..111538TCONS_00073164-exon-scaffold_87-1491911889:111460..111538Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1510915933:111460..111538TCONS_00073164-exon-scaffold_87-1510915933:111460..111538Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1575043694:111460..111538TCONS_00073164-exon-scaffold_87-1575043694:111460..111538Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1491911889:117852..117970TCONS_00073164-exon-scaffold_87-1491911889:117852..117970Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1510915933:117852..117970TCONS_00073164-exon-scaffold_87-1510915933:117852..117970Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1575043694:117852..117970TCONS_00073164-exon-scaffold_87-1575043694:117852..117970Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1491911889:120849..123067TCONS_00073164-exon-scaffold_87-1491911889:120849..123067Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1510915933:120849..123067TCONS_00073164-exon-scaffold_87-1510915933:120849..123067Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1575043694:120849..123067TCONS_00073164-exon-scaffold_87-1575043694:120849..123067Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_87supercontigscaffold_87:111460..123067 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.310568	0.336918	0	0	93.4374	68.5909	27.0906	23.4321	4.27649	5.82706	2.21506	3.46915	0	0.458207	0	0.166655	2.57276	2.03564	0	0.214802	2.9744	2.65222	0.318195	0.671524	0	0.692974	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073164 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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