TCONS_00073164 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073164
Unique NameTCONS_00073164
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2417

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073164 ID=TCONS_00073164|Name=TCONS_00073164|organism=Clytia hemisphaerica|type=transcript|length=2417bp
TCATTCTCGATTATGaatgcattttggcgggacatTCATGACGACAGCCA
CTTGCTTATTAATTTAAGATTAACGCTTGgaaagaaaatagacaaaCAAT
GTATCGGTTGAACACTGGAAGCAAAGACTTGCTAAAGATTGCCTTCGTAG
TATTTGCAATGATAGTGATGTACCACGAAGTCTTTCATTCGAACGCCGTA
TCAAAAGTGTTAACCAACAAACGTGACACAGTTACAGTTGCCGTTATCGA
AGAAGAACAGAGAGTTCAAATCTCACTCCCAAAGAATTCTGCAAAAGCTG
CAAAACTGAAAGAAAGTATTAAACAAATACTTAAAAATCTAAACCAGCAA
AAATTGATCCTGTCAACAAATAAAAAAGTGAAtgtgaaaatggtcaaaac
acCGAAAGCTCCAAGCACAACGACAACAACGGAAGTACAGAAAACGATGA
AAATACCGAAAACGACGAAATTACCGACGACGAAGAAATTACCGACAACA
ACTAAAACTCCGACCACATCTCGGGATTACCTCGGTGTAATTTCATACAT
CCCAAATTCCGAATCTCACGCCAGACAATATTTGGCTTTCGCATATGCAT
CATGGAGACATATCACAGACAAAGAGGAGAAACTTTTAGACAAAAACATT
ACAAATGAGTTGCGCAATAGCATTGATCTTCTTGCATTCTGTCACCCTAA
TATTTGTCCCCACCTTGAGCAATTCTGCACTAAAATCACCAACATCTCAA
AAGTCCATAATGCTGTCAAACAAAAATGCTGGGCCGTTGAACAACCCTTT
GAGACGGATATCCGGTACGGCCCGCTAAACTCATACATCATGTTTAAGAG
AAGAGACGTCACTGAATTGtcaaaaaagtataaatatcTTCTCCGCACGG
ATAACGATGTTTTTATAAGCCCtgctttgtttttattaaaaccgACCAAT
TTCTTGTTTGGCCGTGGAGGTTATAGTGATCCGTTCAATATGAAACGATT
GAAAGAAGTTTCTAAGCGACTTGGAATGACCCATCGTGGACGACACGGTA
TTGGCTCAACTTGGTGCGCCGAAACAAAACAGTTTATCGCCATCGCCAAT
AAGACTTACGATACAACCCGCTATGTTTGGTTGAACGAATTCAACCCAAA
GGCTCAAGGCTTggaaaccatcaattttactaAAAATATCGAGGGTGAAT
GGATCCGCTGGTGGAGACCAGTTTCTTTGCTATATGGTGGAGAAATAGCG
ATCAACCACATGCTACCACAAATTTCCGACCAAAATCAAGGAAGATTTGA
TGATTCCTCATGCTCAACAGAAAGTATTTGGAAAGCATATCATATTCATT
GCTGGCATAGTCCTTGTCATTTCTCAAAATTCGAATTCGATAATTTCATA
AATAACCTTTTACATGGTACGAAAGATTTGAGCAATAAATTGAGTAAAGA
ACTGGTGAGAAACAGTTATGACAAAGACACCAGAAATATGACAATGCAAC
AATTTTCTTCTTATATCGCTTATAATGCTATTGGAAAATATTTGGGAAGA
TATTTCCAGAATTGACAAGTATATGGGTTAACATGCGTGAAATGAGATTT
GCCCGGGGGGTattacccttgtcgaccgacggggatgCTCCGCAAATTTG
TTTTCCGTACATGtacgggagtatcatcgacggtcgggagtatttCATTT
TTACGGTCGAGAGTATCATTGACGGTCAGGAGTATCATTGACGGTCAGGA
GTATCattgacggtcgggagtatctcatcttgaAGGTCGGGAATATCATC
GACGGGCCGGAGTATTTTAAACTTATCTTAAaccttgaaatatcgacccg
accggggcTCGAACCCACCAAATCAAAGAGTTTCCGCTGAGCGTTTCCGt
tgaaatacttatagaatgacaaaaagacgggggtaatgttattataatat
gggtaaaattgctccttttttaacctgactgaaattcgagccatTAATAG
Cagccctgcggggcccaaggcgccgagtatgcaaccggcacagtgacaag
ccatTACTAGGAACTCTGACCTAGgctattccaaacaacaaaaccaaaca
acaaagatgagatactcccaaccgtcgatgatactcccgtccatgtacgg
aaaaaaatttgcgagtgctccgctgaggttcaaaaaatggaccctacgtg
ggactcgaaatttgcgaaaatgtgaccctgaatgggactgaaatttcaaa
atgttctcaaattttctactttttccaaaattttaaaaataggcacccta
cgagggactgattttttattgtggtgtttttgcgaccctacttggggctc
gtggaggttaaaaaaggtaccctgaccagcgaagcatccccgtaacccat
cttgtcctagtaccccc
Run BLAST on NCBI

protein sequence of TCONS_00073164-protein

>TCONS_00073164-protein ID=TCONS_00073164-protein|Name=TCONS_00073164-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MYRLNTGSKDLLKIAFVVFAMIVMYHEVFHSNAVSKVLTNKRDTVTVAVI
EEEQRVQISLPKNSAKAAKLKESIKQILKNLNQQKLILSTNKKVNVKMVK
TPKAPSTTTTTEVQKTMKIPKTTKLPTTKKLPTTTKTPTTSRDYLGVISY
IPNSESHARQYLAFAYASWRHITDKEEKLLDKNITNELRNSIDLLAFCHP
NICPHLEQFCTKITNISKVHNAVKQKCWAVEQPFETDIRYGPLNSYIMFK
RRDVTELSKKYKYLLRTDNDVFISPALFLLKPTNFLFGRGGYSDPFNMKR
LKEVSKRLGMTHRGRHGIGSTWCAETKQFIAIANKTYDTTRYVWLNEFNP
KAQGLETINFTKNIEGEWIRWWRPVSLLYGGEIAINHMLPQISDQNQGRF
DDSSCSTESIWKAYHIHCWHSPCHFSKFEFDNFINNLLHGTKDLSNKLSK
ELVRNSYDKDTRNMTMQQFSSYIAYNAIGKYLGRYFQN
Run BLAST on NCBI

transcript from alignment at scaffold_87:111460..123067+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073164 ID=TCONS_00073164|Name=TCONS_00073164|organism=Clytia hemisphaerica|type=transcript|length=11608bp|location=Sequence derived from alignment at scaffold_87:111460..123067+ (Clytia hemisphaerica)
TCATTCTCGATTATGaatgcattttggcgggacatTCATGACGACAGCCA CTTGCTTATTAATTTAAGATTAACGCTTGGTAGgtttcttttatatttat aaGTATTTAGTTTTATTGGTTGTTTTCTGTAGaggatatttatttttgag ttctactttgttttgttattttggtAATAGAATTTggtgtatattttttt tttttaatttgaataatTGGTGGTCTGTTTTTGTAAGTAATTGAATGATT AGTTTTGGAGTTATAAGGTTTGCTTATTCTGCGATCTCAGTTTGCTTAAG TCCGGTTTGCTCtttttcgaaaacaaagaaTAATTGTGGTAAAttcgagg ggcaaatcactcaGAAAATGgtggttagtgtaaaacgcaggtcacaggtc atctTAAATTTCTAAGTTTATCAAATAAGTAATTCTGAATGGAATGATGT CTCTTGGGTCGTTATGTAGTTAAATAAACGAAGTTAAATTGAAGCGatta tataataataataccCTTAGGTGATTATTTAATTAGATTAATTAATGAAT TATGAAGTTTGactattttgatttcttttttttggcgCTCATAGACagtg ttgttataaaaaaatttaaggaaGGTTATGTTTTGGATTTAAGGCTTGAT GTGATTTTTATGATATTTAAGAGTAGTAGTTattctattaaaaaaattta tctttataaaaatattaggtTGAAATATTACTTGGTGAGAGCGAGTCTAA ATTTGTAAtagataaaagatttttttgttattgtttttatggttttatgg tttgatgtgaGAATAtgttagaaaaagaaaaagagaaaaatcgaagcatt tttagcatttttaataaaatttttaggTAAATTTATGAGGTGTATAGTTT CAATTGAGTATAAAAAGATAGTTCAAGCATAAATGTACAACATATTATGC CTATATACAGTATGGCGGGTAACTCTGTTACATTTGGAAATAATCCAAAC ATAAAACACATGAAATTTTATAAAAGGTTGTTGCTGTTTTCACAGCATGC TGTCAGTGGTTACCAGTTCTTTGATGTAATGTGTTTTTTAAGTGTTTTTC TTATCCCTGTAGAgttaatgaatctaaggaaattccctttttataccaca agtagttattaagcgctcttcataggttaaaaatattactctactcaaag cattcgaacagttatgttgcagtatcttcagattcacgctttttatagga aaaaccaatAAGTTATATAATATTCTGGCTCGGCTGCTCTCaattttata tgagtttttcaggcttaaatgtaaATACTAATAAAAATGGAAACCTGTAC ttttcagtaatttctgaaattttgggctcagattcttcttaatttgttct taggttttggccaaattttagcctcgtattcttatgaaatattgttctta taagacaATTGttcgtgtaagacaaggcacggatgtcactctaaatagac tgtaaatcactcccttgacacatttgttagcatttgaaagaattttgtct caggtGAGAGGttactcttaacaaaaattactgtatgGCTAAGCTCATTC CTTTTGAAcacaaattcaactctatgtgttcgttttgctgcggtggcacc ttatcgttttgctgcggtggcacctgatcgttttgctgcggtggcacctt atcgttttgctgcggtggtaccttaatgaaagttatagctagttttattt caaagggttgaattttaattttcaaaataactcGCTTTTACCAAGCGAAT TTTATTAAGGTAAATTGTTTAATATGATTGTTTTAGTAATTTTCATTTGG TTATAATTCGGTTTGCACTGACAGCTAGAGTACATACATACCCTTTGGAT AACTGTTTTAAAAAACAGTCCTTTATTAGATTTGATTAAAATTAAGTTTG TTTTAAGTTGAAGATGTCTCAAATAAAAGATTGAttaattaataaataaa tagacTTTCGACTCTTCCAGTTTTTCTggtataaatttttttaaattgtt ttggtataaaatgtctaaagttttctctttctttttctgatataaagttt tttcttttcttatgaGTGCTAAGGAACTACTTACTTGTACTTGCTGGTTT AGCCAAATCGTCCATTTGACAACTTTTGGCGGTTCGTCTGGGATGAACCA TGTCCCTTTCGTTTTAGTTCTTCTTTGTAGAAATTGTCTTTTGTCAACCC GGGAGATTTCATCACTTTGTCTTCTAGTGTCTCAGTTGGTCGACCAATTT TCGTACGTTTGTTTACGTTGAACAagagtcttttttttattaaacatTGG TTTGGTTGTCGTGCCAAGTGTGCGAGATAActtgattgtttgttttcata cGAAAGTTCCGATATTATCGGTTCGACAAATTCGTAGAATGTCTTGGTTT GTCATAACAAACCGATATTCCTCAGTCTTGGAGTCATTTCGTACAAGTTT CCTAAGCATACCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgtcc gagccgaaaatcgaaaaccgaccctttgagagacaaaattttggtgattt tgggaccctttgagagactttttcctaaattttggttcattttttccaaa tttaattttgattttcaccaaattttggtcaaaatttttggaaatcgtga cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNATACCAACATATACAGAATTTATTATATTCATTTCTGCAGTACT CACATTCCAAGTCTGGCAAGAATAGGTCCGTCTAGTGCGAACCATTGAAT TGAAAATCAGTactctttttttcaaatgaattttATAATTCGTTAATTTA GTAATCAGTTCGTAAAATTTAGCTTCAGCTAGTGATAAACCAAGGCTTAT TTTTGCCCTGCCCGTCGATTGTCCGTCATATTTTATCTCATCTCCGAGGT ATCGAaatgttttaacgtttttgatcACCAGATTCTGTAGTTTAGCAATA GATTTAGGGTACGTCGACTGGTAATGTTCTTTGATGTCTTTGATGTATTC AAAGTTGAAGATCatactttttgttttcttgatgtTAATACTCAGTTCGT ATTTTGAGAATATCTCATGTAAAAGAAAGAGACCCTTTTGAAGATTGACT GCACTTTCGGAAAATAGTTCTAAATCGTCCGCATAACCCGACCAGTCTGC GTCATGATCTCCTCATCTTTCGCTCTCTCCTTTCGGGTGGTTGTAGTTGA ACGTATACGATATTTCAGTTTTAGAGAATTTATTTGGTGAGTTTGACATT CATTTTCATAAACTCTCGTAACGTAGTCGATGTATAAATTATACAAAAGC GGGGACTCTGGACCACCTTGACGAACACCAgttaagatttcaaaaattta aaaatgttccTCTCCCCGAACGAAATCTTTGTTGCTGGTCCATTAGCGTT TTATCGTACTACGACTTGATTCTATTTATAATTACTATCACGAGAATCTT ACATAGGACTGAGCCGACTTGTAACGCCCTATAGGTTTTAGGGTCAGATG GACTTCCCTTTGAGGCTTCTTTCCATAGCGCAACTAGTTTGGAATGTCCA AGAATTCGGAATTGTCTGTGATTCCCAAATATCATTGagaagattatgga cttcatttaTAAGTTCGACAGAGTTAGTGGCGTATTTGAAAAATTCGGAA GGGGCATCTGTTGACGCCTTTccatttttcatcgatttcagCACTTTCTT TATTTCCTCGGGTGTCGGTGGATTTTGGTTGATATCGTCTTCATTGTCCT GAAGCATTTCAATGAAGGATGGGACAGCTTCGTGGTGAAGTGGTTATAAA AATAGTTTCTGAGTTTTTCGGAGTCACATTTGTTTTTCCTTCGAACGTTT TGGAACGAAGAATTAACATTTTAAATCTTTCTGAACAGTTGCATGCTGGT TTATCGTCTCGGCTTCGCGTTTTAGCTTTTCGTTACGTAGGAATTTCACA CGATTCTTTATCTTCCTGGTAGCTTTCTTGAATTCTTGAGTACCTTTCAA AAGAGCCATTCTGTTTTCAAGAAGTCTATTGAGGCAATCATCGTCTTCAG AGTTCTCTTTGGATTCGTCACGATTTTGTTTCAGTGGACCATTGATTCAT ATTTTCgttcgttcttttcttttatttctttttcatataATAATATCGCA CCAACgattattattttaattttcaacacAAATCGTAATAAAATTCGATT CTATCGTTCTATCCGGGGATGCTTAGGGAAAATAAGTGTCACTTATGTGC GAGGCATAAGGGTAACTTTTTTACACCCTCGACAATCTATTGAACGAAAT TACAATTGAGTGTATGAGAGGGTggcaaaattacaaaatcaaaatcgaaG ATTGACTCGCACACAGAGTAATGAATTTTCCAGGCTCCCCCAAGTAGGGa cgctgaaggctcaaaattagataaaattagctacaatcagtgccaaaata cttggcacaaaagggaaattccccaagaaattttataaccacaaacaagg gtagagttttaaggACTTAAAGcctaggaccttaggatctaaggatcaaa aagttcaaaaatgatcCGGTAttgcttgaaatatagcctagaaaccaata aatccctcccaaatctaaatattcgatgaaatcaagtttaaggcccgaaa ttgacattcttgctcgaacttcaatttttgaaaaatggtgaaatagcaaa aattgccaatattttatggcactgattgtaggaatttgagaaaaaatctc aatTACTTAAAAGTAGGGAAGCTGAAGTTTCCTAAGTCTCTCCACTTCCA CTGGGCTTGTTTTCGTAATTTAGATTGAAGATTTAAAAATCCATAAGTTG CCATAAAGCTTAATTCCATTGCTAGATTGATACTCACCGATATTAAGACA AagagtaccgtgaaaagcacaggccgaACTTAAGGTCGGCAAATCGTCAT ATTCTTTTCGTGCATTGCCAAATTCGAAGTTCACTAGCTTTAAATAAGAT CCTCACGGTGTACGAAGAGGCTCTATTTTTTGGCACATTTAATGGCTAAA ACAGAGACAAaggtttttgcttaaaattctgAAATCGACAGATATGTGAG ATTTAGTAGAAATAACACTTTGAGTGTTGAGTGACTTATTTTTTCGTGTT CTAGGAATCCTTTTGAAGAAACTCAATGTCGGACCTGACTGGCATTATCG AGTAGAAAATTACGGAGTCTTGTAAAATGTTTCAGGAGGTCTCTttctag aaaaagaaaattaacctTCTCTCTTGAATTTATTTTAACAggaaagaaaa tagacaaaCAATGTATCGGTTGAACACTGGAAGCAAAGAANAAAAAATCT CAATTACTTAAAAGTAGGGAAGCTGAAGTTTCCTAAGTCTCTCCACTTCC ACTGGGCTTGTTTTCGTAATTTAGATTGAAGATTTAAAAATCCATAAGTT GCCATAAAGCTTAATTCCATTGCTAGATTGATACTCACCGATATTAAGAC AAagagtaccgtgaaaagcacaggccgaACTTAAGGTCGGCAAATCGTCA TATTCTTTTCGTGCATTGCCAAATTCGAAGTTCACTAGCTTTAAATAAGA TCCTCACGGTGTACGAAGAGGCTCTATTTTTTGGCACATTTAATGGCTAA AACAGAGACAAaggtttttgcttaaaattctgAAATCGACAGATATGTGA GATTTAGTAGAAATAACACTTTGAGTGTTGAGTGACTTATTTTTTCGTGT TCTAGGAATCCTTTTGAAGAAACTCAATGTCGGACCTGACTGGCATTATC GAGTAGAAAATTACGGAGTCTTGTAAAATGTTTCAGGAGGTCTCTctcta gaaaaagaaaattaacctTCTCTCTTGAATTTATTTTAACAggaaagaaa atagacaaaCAATGTATCGGTTGAACACTGGAAGCAAAGACTTGCTAAAG ATTGCCTTCGTAGTATTTGCAATGATAGTGATGTACCACGAAGTCTTTCA TTCGAACGCCGGTAAGTTGGTATTTGTGTCCAGAAGGCTtgtgtctcttt ttattgttaaaagatctTACGTACCGAAAtcgcaaaaattttgatcatgt gattagaaaatagagcAATCCAAAGAGGacattttggtaacgtgataaaa agtatgcaaatcgcaacttttcttttgtttgtaacaaaagaaaattgaac aaaaagctaaaacaatacaggTGCCAGACCGgagtttttataatgactat gcttTTACAGTGAAGCCTCTATTGATCTTTATAGTATAGCTCGAGTAGGT TGTCTGGTCCCTTAAGTTAGcaattacacccccttctcacagacccactg ggaccccttcccactggaaaaattagccaaaatgtcatcattgaaaataa tcaaataaaccaatccttaATGGAAAATATTTaccatttttcccatcccc aatGAATGAAAGAATCCTACCAGGACTTTGGGAAGAGGGTGTGCAACCCA GTATAGAATATGTAACAAATATTCTTCATCCAACTCTCCACGCCTGTTTA ACCATGAatttaaagccatttttttcaaaaagtcttaATGTTAATGTTCT TGATTTAGATGAAATCTAAATTAGATTATAACATCATTTGCAATTTCGCT TGTTATATTGGTTGCTTGCTGCAaagcataggcgtagcgagataccctgc aaaatttaccgatgagagcggtttttacgacactgttattgtctttgttt tatcaaaaggtaataaatatgtcataaacgtctgcactccctcgtaagtt ttgcagggtatctcgctacgcctatgcaaAGCAATCACATTGAAAATCAG GATCAAAATAAACATAACACAAGAAACGGGAAATAACGCCCATTCTGTTG CGAGCCACTTAATTGAGGAATTTGTTCCAATCCTTAATGATTTGCTATTA GATTAAGGTCTATTTTCGTGTTGTCATTTTGATAAACTCGAAAGAATtcc aaagatttcaaaattctttgatATTTAGCTCAATCGTcacatactcttag gttccaaataaacaggccctcccccgcttgttaatttttcgaaaattttc caacctccCGGACCTTATTAGTACCCCCCGGTTATTAATTCTTAAGAATG TTTCTGCTGTTAAGAgaagtcagaaaatcagaaaaagccccttattttgc tctgaATAGCCTGATTTTACCTAATTTTTGGTTTTACAGAAGTACAAGGT AATTAGGGCAATTAGGTCTCAACGTTTATCAAAATCTCGAAAATCTTCNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCC CGAACCTAAGAGTAACGAAGTCTTTATAATATATTTCAGTATCAAAAGTG TTAACCAACAAACGTGACACAGTTACAGTTGCCGTTATCGAAGAAGAACA GAGAGTTCAAATCTCACTCCCAAAGAATTCTGCAAAAGCTGCAAAACTGA AAGAAAGTATTAAACAAATACTTAAAAATCTAAACCAGCAAAAATTGATC CTGTCAACAAATAAAAAAGTGAAtgtgaaaatggtcaaaacacCGAAAGC TCCAAGCACAACGACAACAACGGAAGTACAGAAAACGATGAAAATACCGA AAACGACGAAATTACCGACGACGAAGAAATTACCGACAACAACTAAAACT CCGACCACATCTCGGGATTACCTCGGTGTAATTTCATACATCCCAAATTC CGAATCTCACGCCAGACAATATTTGGCTTTCGCATATGCATCATGGAGAC ATATCACAGACAAAGAGGAGAAACTTTTAGACAAAAACATTACAAATGAG TTGCGCAATAGCATTGATCTTCTTGCATTCTGTCACCCTAATATTTGTCC CCACCTTGAGCAATTCTGCACTAAAATCACCAACATCTCAAAAGTCCATA ATGCTGTCAAACAAAAATGCTGGGCCGTTGAACAACCCTTTGAGACGGAT ATCCGGTACGGCCCGCTAAACTCATACATCATGTTTAAGAGAAGAGACGT CACTGAATTGtcaaaaaagtataaatatcTTCTCCGCACGGATAACGATG TTTTTATAAGCCCtgctttgtttttattaaaaccgACCAATTTCTTGTTT GGCCGTGGAGGTTATAGTGATCCGTTCAATATGAAACGATTGAAAGAAGT TTCTAAGCGACTTGGAATGACCCATCGTGGACGACACGGTATTGGCTCAA CTTGGTGCGCCGAAACAAAACAGTTTATCGCCATCGCCAATAAGACTTAC GATACAACCCGCTATGTTTGGTTGAACGAATTCAACCCAAAGGCTCAAGG CTTggaaaccatcaattttactaAAAATATCGAGGGTGAATGGATCCGCT GGTGGAGACCAGTTTCTTTGCTATATGGTGGAGAAATAGCGATCAACCAC ATGCTACCACAAATTTCCGACCAAAATCAAGGAAGATTTGATGATTCCTC ATGCTCAACAGAAAGTATTTGGAAAGCATATCATATTCATTGCTGGCATA GTCCTTGTCATTTCTCAAAATTCGAATTCGATAATTTCATAAATAACCTT TTACATGGTACGAAAGATTTGAGCAATAAATTGAGTAAAGAACTGGTGAG AAACAGTTATGACAAAGACACCAGAAATATGACAATGCAACAATTTTCTT CTTATATCGCTTATAATGCTATTGGAAAATATTTGGGAAGATATTTCCAG AATTGACAAGTATATGGGTTAACATGCGTGAAATGAGATTTGCCCGGGGG GTattacccttgtcgaccgacggggatgCTCCGCAAATTTGTTTTCCGTA CATGtacgggagtatcatcgacggtcgggagtatttCATTTTTACGGTCG AGAGTATCATTGACGGTCAGGAGTATCATTGACGGTCAGGAGTATCattg acggtcgggagtatctcatcttgaAGGTCGGGAATATCATCGACGGGCCG GAGTATTTTAAACTTATCTTAAaccttgaaatatcgacccgaccggggcT CGAACCCACCAAATCAAAGAGTTTCCGCTGAGCGTTTCCGttgaaatact tatagaatgacaaaaagacgggggtaatgttattataatatgggtaaaat tgctccttttttaacctgactgaaattcgagccatTAATAGCagccctgc ggggcccaaggcgccgagtatgcaaccggcacagtgacaagccatTACTA GGAACTCTGACCTAGgctattccaaacaacaaaaccaaacaacaaagatg agatactcccaaccgtcgatgatactcccgtccatgtacggaaaaaaatt tgcgagtgctccgctgaggttcaaaaaatggaccctacgtgggactcgaa atttgcgaaaatgtgaccctgaatgggactgaaatttcaaaatgttctca aattttctactttttccaaaattttaaaaataggcaccctacgagggact gattttttattgtggtgtttttgcgaccctacttggggctcgtggaggtt aaaaaaggtaccctgaccagcgaagcatccccgtaacccatcttgtccta gtaccccc

Coding sequence (CDS) from alignment at scaffold_87:111460..123067+

>TCONS_00073164 ID=TCONS_00073164|Name=TCONS_00073164|organism=Clytia hemisphaerica|type=CDS|length=2934bp|location=Sequence derived from alignment at scaffold_87:111460..123067+ (Clytia hemisphaerica)
ATGTATCGGTTGAACACTGGAAGCAAAGACTTGCTAAAGATTGCCTTCGT
AGTATTTGCAATGATAGTGATGTACCACGAAGTCTTTCATTCGAACGCCG
TATCAAAAGTGTTAACCAACAAACGTGACACAGTTACAGTTGCCGTTATC
GAAGAAGAACAGAGAGTTCAAATCTCACTCCCAAAGAATTCTGCAAAAGC
TGCAAAACTGAAAGAAAGTATTAAACAAATACTTAAAAATCTAAACCAGC
AAAAATTGATCCTGTCAACAAATAAAAAAGTGAAtgtgaaaatggtcaaa
acacCGAAAGCTCCAAGCACAACGACAACAACGGAAGTACAGAAAACGAT
GAAAATACCGAAAACGACGAAATTACCGACGACGAAGAAATTACCGACAA
CAACTAAAACTCCGACCACATCTCGGGATTACCTCGGTGTAATTTCATAC
ATCCCAAATTCCGAATCTCACGCCAGACAATATTTGGCTTTCGCATATGC
ATCATGGAGACATATCACAGACAAAGAGGAGAAACTTTTAGACAAAAACA
TTACAAATGAGTTGCGCAATAGCATTGATCTTCTTGCATTCTGTCACCCT
AATATTTGTCCCCACCTTGAGCAATTCTGCACTAAAATCACCAACATCTC
AAAAGTCCATAATGCTGTCAAACAAAAATGCTGGGCCGTTGAACAACCCT
TTGAGACGGATATCCGGTACGGCCCGCTAAACTCATACATCATGTTTAAG
AGAAGAGACGTCACTGAATTGtcaaaaaagtataaatatcTTCTCCGCAC
GGATAACGATGTTTTTATAAGCCCtgctttgtttttattaaaaccgACCA
ATTTCTTGTTTGGCCGTGGAGGTTATAGTGATCCGTTCAATATGAAACGA
TTGAAAGAAGTTTCTAAGCGACTTGGAATGACCCATCGTGGACGACACGG
TATTGGCTCAACTTGGTGCGCCGAAACAAAACAGTTTATCGCCATCGCCA
ATAAGACTTACGATACAACCCGCTATGTTTGGTTGAACGAATTCAACCCA
AAGGCTCAAGGCTTggaaaccatcaattttactaAAAATATCGAGGGTGA
ATGGATCCGCTGGTGGAGACCAGTTTCTTTGCTATATGGTGGAGAAATAG
CGATCAACCACATGCTACCACAAATTTCCGACCAAAATCAAGGAAGATTT
GATGATTCCTCATGCTCAACAGAAAGTATTTGGAAAGCATATCATATTCA
TTGCTGGCATAGTCCTTGTCATTTCTCAAAATTCGAATTCGATAATTTCA
TAAATAACCTTTTACATGGTACGAAAGATTTGAGCAATAAATTGAGTAAA
GAACTGGTGAGAAACAGTTATGACAAAGACACCAGAAATATGACAATGCA
ACAATTTTCTTCTTATATCGCTTATAATGCTATTGGAAAATATTTGGGAA
GATATTTCCAGAATTGAATGTATCGGTTGAACACTGGAAGCAAAGACTTG
CTAAAGATTGCCTTCGTAGTATTTGCAATGATAGTGATGTACCACGAAGT
CTTTCATTCGAACGCCGTATCAAAAGTGTTAACCAACAAACGTGACACAG
TTACAGTTGCCGTTATCGAAGAAGAACAGAGAGTTCAAATCTCACTCCCA
AAGAATTCTGCAAAAGCTGCAAAACTGAAAGAAAGTATTAAACAAATACT
TAAAAATCTAAACCAGCAAAAATTGATCCTGTCAACAAATAAAAAAGTGA
AtgtgaaaatggtcaaaacacCGAAAGCTCCAAGCACAACGACAACAACG
GAAGTACAGAAAACGATGAAAATACCGAAAACGACGAAATTACCGACGAC
GAAGAAATTACCGACAACAACTAAAACTCCGACCACATCTCGGGATTACC
TCGGTGTAATTTCATACATCCCAAATTCCGAATCTCACGCCAGACAATAT
TTGGCTTTCGCATATGCATCATGGAGACATATCACAGACAAAGAGGAGAA
ACTTTTAGACAAAAACATTACAAATGAGTTGCGCAATAGCATTGATCTTC
TTGCATTCTGTCACCCTAATATTTGTCCCCACCTTGAGCAATTCTGCACT
AAAATCACCAACATCTCAAAAGTCCATAATGCTGTCAAACAAAAATGCTG
GGCCGTTGAACAACCCTTTGAGACGGATATCCGGTACGGCCCGCTAAACT
CATACATCATGTTTAAGAGAAGAGACGTCACTGAATTGtcaaaaaagtat
aaatatcTTCTCCGCACGGATAACGATGTTTTTATAAGCCCtgctttgtt
tttattaaaaccgACCAATTTCTTGTTTGGCCGTGGAGGTTATAGTGATC
CGTTCAATATGAAACGATTGAAAGAAGTTTCTAAGCGACTTGGAATGACC
CATCGTGGACGACACGGTATTGGCTCAACTTGGTGCGCCGAAACAAAACA
GTTTATCGCCATCGCCAATAAGACTTACGATACAACCCGCTATGTTTGGT
TGAACGAATTCAACCCAAAGGCTCAAGGCTTggaaaccatcaattttact
aAAAATATCGAGGGTGAATGGATCCGCTGGTGGAGACCAGTTTCTTTGCT
ATATGGTGGAGAAATAGCGATCAACCACATGCTACCACAAATTTCCGACC
AAAATCAAGGAAGATTTGATGATTCCTCATGCTCAACAGAAAGTATTTGG
AAAGCATATCATATTCATTGCTGGCATAGTCCTTGTCATTTCTCAAAATT
CGAATTCGATAATTTCATAAATAACCTTTTACATGGTACGAAAGATTTGA
GCAATAAATTGAGTAAAGAACTGGTGAGAAACAGTTATGACAAAGACACC
AGAAATATGACAATGCAACAATTTTCTTCTTATATCGCTTATAATGCTAT
TGGAAAATATTTGGGAAGATATTTCCAGAATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045378XLOC_045378Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073164-proteinTCONS_00073164-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073164-exon-scaffold_87-1491911889:111460..111538TCONS_00073164-exon-scaffold_87-1491911889:111460..111538Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1510915933:111460..111538TCONS_00073164-exon-scaffold_87-1510915933:111460..111538Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1575043694:111460..111538TCONS_00073164-exon-scaffold_87-1575043694:111460..111538Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1491911889:117852..117970TCONS_00073164-exon-scaffold_87-1491911889:117852..117970Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1510915933:117852..117970TCONS_00073164-exon-scaffold_87-1510915933:117852..117970Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1575043694:117852..117970TCONS_00073164-exon-scaffold_87-1575043694:117852..117970Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1491911889:120849..123067TCONS_00073164-exon-scaffold_87-1491911889:120849..123067Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1510915933:120849..123067TCONS_00073164-exon-scaffold_87-1510915933:120849..123067Clytia hemisphaericaexon
TCONS_00073164-exon-scaffold_87-1575043694:120849..123067TCONS_00073164-exon-scaffold_87-1575043694:120849..123067Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_87supercontigscaffold_87:111460..123067 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.310568 0.336918 0 0 93.4374 68.5909 27.0906 23.4321 4.27649 5.82706 2.21506 3.46915 0 0.458207 0 0.166655 2.57276 2.03564 0 0.214802 2.9744 2.65222 0.318195 0.671524 0 0.692974 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073164 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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