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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073089 ID=TCONS_00073089|Name=TCONS_00073089|organism=Clytia hemisphaerica|type=transcript|length=1004bp
NTCAAGTACTATACATGAGAAATAAAGTGACAACTTGAATGGTTTAGGAC
AGACAACAATTGGTATATACTTAAACACGAAAAGATGCTTGAGAGGCTGA
TTATTGGCGACATGATTCTAAAGCGTGATAAGGAAAAATCGAACTTTTAA
TTCTTATTACCATAGACATGCCCAGAACTAGTTTTAAAGAGGACCATACT
CGGATGTACTAAATTTCGTTTAGCAAGGATGTCAGTAATTTTAAGTATTT
ATGGCAGTTAAATACTCTACTGTTAAGTTAGTTCAAATTGTTTTCACTCA
CTTCTCAGATCAAATTCTATATATATATCAATACGAAGTCAAATTAGACT
taaaaccatttcaattttagTTGTCGTTTGATTTTGGATTTccttaggct
acgtcatatcttccttcgtttcgagcgttaaaatctctattgatgaacat
cttttgtgaaagttgtttattatgtttaaacctattaataagcaattccc
ggtggggggttactagtggccgcctatagtaGTGCCTGTAGACTAGAATT
TCCTTAGAAAGATATCGTCAAACtcatttttgttaattttgaatGCGTCC
TTTTAATTCTCGTTGATAATTAATGACGGTCGTGGTTTAATTTTTATACG
AAAACACCAAAGCGAAAAGACTGACAgttttaaatcaatttagatttggt
atagtctacacaatagaaagctccaggcttttaggccttactcttggtct
ataggcactgctataggcggccactagtaaccCCTACCGGgggaaacgaa
ggaagatatgacgtagcctagatTTGGTAGCGTTATGTTGTTTTGCTGTG
CTTCCTGCAAATCGTTTATTTTGGATTCCCCTCAAGTGTCTTTTCATAAT
TTCCCTTTGCCCGGTCGTTATGATACGAGCTTCTGATTGAATAGGCTAca
tcatatcttccttcgttttgaGCGTTTCTTTTATATTACCTTCCAATGCC
AGTN Run BLAST on NCBI transcript from alignment at scaffold_86:4141..5144 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073089 ID=TCONS_00073089|Name=TCONS_00073089|organism=Clytia hemisphaerica|type=transcript|length=1004bp|location=Sequence derived from alignment at scaffold_86:4141..5144 (Clytia hemisphaerica)
NACTGGCATTGGAAGGTAATATAAAAGAAACGCtcaaaacgaaggaagat
atgatgTAGCCTATTCAATCAGAAGCTCGTATCATAACGACCGGGCAAAG
GGAAATTATGAAAAGACACTTGAGGGGAATCCAAAATAAACGATTTGCAG
GAAGCACAGCAAAACAACATAACGCTACCAAatctaggctacgtcatatc
ttccttcgtttcccCCGGTAGGggttactagtggccgcctatagcagtgc
ctatagaccaagagtaaggcctaaaagcctggagctttctattgtgtaga
ctataccaaatctaaattgatttaaaacTGTCAGTCTTTTCGCTTTGGTG
TTTTCGTATAAAAATTAAACCACGACCGTCATTAATTATCAACGAGAATT
AAAAGGACGCattcaaaattaacaaaaatgaGTTTGACGATATCTTTCTA
AGGAAATTCTAGTCTACAGGCACtactataggcggccactagtaaccccc
caccgggaattgcttattaataggtttaaacataataaacaactttcaca
aaagatgttcatcaatagagattttaacgctcgaaacgaaggaagatatg
acgtagcctaaggAAATCCAAAATCAAACGACAActaaaattgaaatggt
tttaAGTCTAATTTGACTTCGTATTGATATATATATAGAATTTGATCTGA
GAAGTGAGTGAAAACAATTTGAACTAACTTAACAGTAGAGTATTTAACTG
CCATAAATACTTAAAATTACTGACATCCTTGCTAAACGAAATTTAGTACA
TCCGAGTATGGTCCTCTTTAAAACTAGTTCTGGGCATGTCTATGGTAATA
AGAATTAAAAGTTCGATTTTTCCTTATCACGCTTTAGAATCATGTCGCCA
ATAATCAGCCTCTCAAGCATCTTTTCGTGTTTAAGTATATACCAATTGTT
GTCTGTCCTAAACCATTCAAGTTGTCACTTTATTTCTCATGTATAGTACT
TGAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073089-exon-scaffold_86-1491911889:4141..5144 | TCONS_00073089-exon-scaffold_86-1491911889:4141..5144 | Clytia hemisphaerica | exon |
| TCONS_00073089-exon-scaffold_86-1510915933:4141..5144 | TCONS_00073089-exon-scaffold_86-1510915933:4141..5144 | Clytia hemisphaerica | exon |
| TCONS_00073089-exon-scaffold_86-1575043694:4141..5144 | TCONS_00073089-exon-scaffold_86-1575043694:4141..5144 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_86 | supercontig | scaffold_86:4141..5144 . |
Blast
The following BLAST results are available for this feature:
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