TCONS_00073057 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073057
Unique NameTCONS_00073057
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3846

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073057 ID=TCONS_00073057|Name=TCONS_00073057|organism=Clytia hemisphaerica|type=transcript|length=3846bp
tttggcggatttgactgaaatccgccaaattaagttcccgccaaaatttc
ttttttccgccatccgccaaattaaattcccgccaaatttagttttttcg
tccatcggccaaattaaattccctctgaaaaaacttttttggccatccgc
caaattaaattcccgccaaattaaacattttgaaaatatgatctctttta
aggtgtttttgctttttttgctgttttgacgccattttaaggttaaattt
ttaagcgaccgccaaattaaattcccgccaaatttagttttttcgtccat
cggccaaattaaattccctctgaaaaaacttttttggccatccgccaaat
taaattcccgccaaaatttcttcctttaaggtatataataaaaaaactta
CTTCTCAGTTTCCAAGCAATACAACTAAATTAGGAGGGATGTATATTTTC
GCACGCTCTGTAAGAAAGTTGGTTGCCAACCCTGCTAAGTTGACACAAGC
TGCTCTCAACACGTTGGCAAAGAGGAATGCTAGGAGTTATGCAAGATCAA
GGATAATTGAgcaacaaaaagtcaaaacaggAGCCGGAGGTTTTAGAGCT
GAGAAAATTGGTCAAGCAGTTTTAGGTGGATCTGCAGCTGCTGGTATTGG
TGCATTGTGTTTTTATGGTCTTGGTCTATCCAATGATGTTGGTGCTATTG
ATAAAGCAAGATTTTGGCCACCTGAGATGCGTTCAATGATCAAATCGACC
TATTTGTATTTTCTTGGAAGTTTGAGTATAACTGCTGGGTCAGCATATTA
TTTGCATCGATCAGCACTTGTCACTCGTATGATGTCTGGAAATCCTTGGG
TTGTTTTTGCAGGTAGCATGGCAGCCTTGATCGGAAGTTCTATGGCTTGT
CGATCCATTGAATATGAAGCAGGATTGAATGCAAAACATTTAGCTTGGGG
AGtccACAGTGGCGTTGTTGGGCTTGTCGTTGCACCCTTGATGTTCTTGG
GCGGACCACTCATCTTGCGAGCCGCCACATACACCGCCGGAACCGTAGCG
GCGCTTTCACTGACGGCTGCATGTGCACCCGATGAGAAATTCTTATCATG
GGGCGGACCATTGTCATTGGGACTGGGTGGAATTTGCGTTGCTTCATTGG
GTGGTATGTTTTTGCCAGCCACTTCGGCAGCAGTACCGGTCATCCAATCT
TTGGTGACGTACGGTGGTCTTGTTGTCTTTGGAGGATTCATGTTGTACGA
TACACAGAAGATCATCAAGAAGGCTGAACTTGCCACGTACAGTGGAAAGA
AATATGATCCTATCAATGCATCGATCGGTATTTATATGGATactatcaac
attttcattcgAATTGCTATGATTATGGCTGGAAATAACCGTCGAAAGTA
AAAAAGAAGAAGTTTGTTGGTAGATTTTTGAAGaacttgaaaaatgaaag
tggtGTTAGTTAACGTTATGAAAGAAGGAGGTTGTATGATGtcaatttgt
ttatatttttggtTAAACAGAACATTATGATCCATAATAGCAGCAGGCAA
TAGTTGACAATACagtcgaaaaggtgtattattaaTCATgtgtttcaagc
cgaaggctagaggcgaatcttcaaccttttttttaaacaagaaaaagtga
aagcCTTAAGGTCTGCGCTGCGTTTCGGAATACAGATTGAATCTACAATC
Agttccaaaatacttggcacaaaagggaaattccccacgaaattttataa
ccacaaacgatttgtaagtgctccaaattaggttggaaaggtagagtttt
aactcttgaGTTTTAACGccagaccttaggatctgaggatccaaaagttc
aaaaatggtccggtagggcttgaaatatagcctagaaaccaataaatccc
tcccagatcgaaatattcgatgaaatcaagttgaaggcccgaaattgaca
atctcgctcgaacttcaatttttgtaaaatggtaaaatagccaaaattgc
caatatgttatggcactgattgtagcatTTCCTTTGCGTTggcgtttttt
atttttcaaattgttgcGGTGAATGTAATACTTTTGATTCagcgtttgta
tgaaaaccatGCGGGCCGTGCAACTTAtgtaggaaataagtggcttcaaa
tcctacaaaGGAGATTCAACTCTGTAGTCTTCCGCTAAACCGTATTGCTA
TTAGCTTCTTAAGTAACCTGAAGTTGTAAAAAAACCTGGATCAACTTGAA
CCCATTCTCCTTATAATGTATATAAGACATACATTGTATGTAGacattca
tcaaaattaaaaattcaaattccaaCATTTCCGAAGGCTTTACTTAGGAA
GTCCTTTAAAATGGAGTAATATTTGCATACAAATGCGAACTTATAAACGT
CATAACAGAGaatatttataaatttgaaattttataatattgcaaaatta
atttttttttaaagaagaacaATGGAAATAATTCAAgtgaaacaaacttt
tttcaatccTCGATATTTAGATGATACTAAAATTCGAAAGCTTTTCGAAT
GTGATTGTGTATTTATGTACAAGTTAAATGTTTTGCAAATACTACTTaac
tgcctaaaaataaaaatgattttgcAATAAAAGTTCTTGCCATATTTTCT
CACTCAGGATCATGACAACTGTGTAATCTTTCTGAGTTATGCTTACATTT
TGCCTTTATGACACCATAACGATTTTGTTACTCTATTACAAGTGTTTGTA
TTACAGCAAAGTGGCATTCTGTTTCCCTGCGTTGGTTGCGGATTATATTT
ATTTAGGTCTTGATTGTTCGGTTCAATAGATGCAGGGTTTTCGTTTTTCG
GTTCAGTAGATGTTGGTTTTTCGTCTTTCGTTTCAGTAGATGCAGGTATT
TCGTTTGTCGGTTCAGTAGATGCAGGTTTTTCGTTCGAAGGCTCAGTAGA
TGCGGGTTTTTCGTCTTTCGGCTCAGTGGATTCAGATTTTTCGTCTTTCG
GTTCCGTGGATGCAGGATTCTCGTCTTTCGGTTCAGTGGATGCGGGTTTT
TCGTCTTTCGGCTCAGTGGATTCAGATTTTTCGTCTTTCGGTTCCGTGGA
TGCAGGATTCTCGTCTTTCGGTTCAGTGGATGCGGGTTTTTCGTCTTTCG
GCCCAGCGGAAGCGGGTTTTTCGTTCGAGGGCTCAGTAGATGCAGGTTTT
TCGTCTTTCGGTTCAGTGGGTGCGGGTTTTTCGTCTTTCGGTTCAGTGGA
TGTGGGTTTTTCGTCTTTCGGTTCAGTGGATGCGGGTTTTTCGTCTTTCG
GTTCAGTGGATGCGGGTTTTTCGTCTTTCGGTTCAGTGGATGTGGGTTTT
TCGTCTTTTGGTTCAGTGGAAGCGGGCTTTTCATTCGAGGGCTCAGTAGG
TGCAGGTTTTTCGTTTTTCGGTTCAGTGGATGTGGGTTTTTCGTCTTTCG
GTTCAATAGACACGGGCTTTTCGTTTGAGGGCTCGTTATTCGATGGAGGT
TTTGTAGGGTCGTCCTCCGGCTTCTTTTCGGggtctttttcttcaaaagg
gGACTAAAAGagtaagtaaacaaaaaaaaattgaaatatgcaCGCATTTG
ATTGTAGATttcatactgtttttttttcatgttaAATTCACAAAATAATA
AAGAACTATAACAAATACAAATTACAAACTAAGTTAGTACTCTGAAAATT
CTTCAGTAATGGTTGTTACAAAACCCGATTTatgctttcaaataaaatta
ttctttGACCTCTTcacatttgaatttttctttcaaacttGGGTTGGGAA
TGCATTTCTCGTTTGGTTTGCATGGATTTTTGGAACAAGGTCCAGG
Run BLAST on NCBI

transcript from alignment at scaffold_86:1146959..1155854-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073057 ID=TCONS_00073057|Name=TCONS_00073057|organism=Clytia hemisphaerica|type=transcript|length=8896bp|location=Sequence derived from alignment at scaffold_86:1146959..1155854- (Clytia hemisphaerica)
TTTGGCGGATTTGACTGAAATCCGCCAAATTAAGTTCCCGCCAAAATTTC TTTTTTCCGCCATCCGCCAAATTAAATTCCCGCCAAATTTAGTTTTTTCG TCCATCGGCCAAATTAAATTCCCTCTGAAAAAACTTTTTTGGCCATCCGC CAAATTAAATTCCCGCCAAATTAAACATTTTGAAAATATGATCTCTTTTA AGGTGTTTTTGCTTTTTTTGCTGTTTTGACGCCATTTTAAGGTTAAATTT TTAAGCGACCGCCAAATTAAATTCCCGCCAAATTTAGTTTTTTCGTCCAT CGGCCAAATTAAATTCCCTCTGAAAAAACTTTTTTGGCCATCCGCCAAAT TAAATTCCCGCCAAAATTTCTTCCTTTAAGGTATATAATAAAAAAACTTA CTTCTCAGTTTCCAAGCAATACAACTAAATTAGGAGGGATGTATATTTTC GCACGCTCTGTAAGAAAGTTGGTTGCCAACCCTGCTAAGTTGACACAAGC TGCTCTCAACACGTTGGCAAAGAGGAATGCTAGGAGTTATGCAAGATCAA GGATAATTGAGCAACAAAAAGTCAAAACAGGAGCCGGAGGTTTTAGAGGT GTGTAAAAAAATTACTGTTTTAATTTTTTTGGTTCTGTACTGTACCAGGG CCTGAAATAATGATCCTGCATTGGACATTGTCTGACCCAAATAGCTTCTT GTCCTACCCAAAAATCATAATTTTCAAGCTAAAGCAACTCTAATTACCCA CTTAAAATCGTTATTTCAAACCTTGTGTATTTTGTAATGTTTATCCTGTT ACACTACAGTACCTCTTAAAGAAAGTTAATGATTAAAACTTTTAGCATTT TAAGAATGAAATTTGAAAAAACCTGACCTCCTTCTCGTTTCAGCTGAGAA AATTGGTCAAGCAGTTTTAGGTGGATCTGCAGCTGCTGGTATTGGTGCAT TGTGTTTTTATGGTCTTGGTCTATCCAATGATGTTGGTGCTATTGATAAA GCAAGGTTAGCTGCAGCACTAATAACTTTTTCTTTAAAACAAACCTTAAA AGAAAAGCCTGGGAAGTTTATCGGACAAGCAGTGGTATTCTTCGGTCTTA ACAAATCTGATGAAACCGTTTCCGACACTTTTATTTCTAATGATTCGTAT CTTCTTAGAATGTTGAATCTATGAATTCCTAAGACTCCGTTACTACTCCA TCATGTATTTATTGTATTATGTACATACTGTAATATTAAAAACATTTAAT TTTGAATTTTGTTTAGTCAAAGTAATCCATTTTTCTCAACGTTATTTTTC CTTGATAGTAAGTGTCTTAACTGAAACCAACTATGGTTTAAATAAAAGTA TATTATAAAAAGTGCTTGATAATTGCCTGATAATCGTAACCTTTTTTAAT TCTATGATAGATTTTGGCCACCTGAGATGCGTTCAATGATCAAATCGACC TATTTGTATTTTCTTGGAAGTTTGAGTATAACTGCTGGGTCAGCATATTA TTTGCATCGATCAGCACTTGTCACTCGTATGATGTCTGGAAATCCTTGGG TTGTAAGTTCAATTTCTCCGTTCTGCTGTTTGTTTTTTCTAATTTCTCAA GATCGAAGAAATTTTGTCGACTACTCTAAGGTTCCAAACAAACGGCCCCC CGCTTATTAATTTTTCGAAAATTTTTCGAGAAGGTCCCTTATTCTGCCCT AAATATCCCGATTTTAGCCTATATTTACCTTATTTTCGGGTTTTTCGTAA TTACAATTTCCAACCTCCGGCAATTAGGTCCATCTCATTTATTAAAATTT TGAAAATTTTCCAACCCCTCTCCGTTTATTCGAACCCCCCGTTTATTTGG AACCTAAGAGTATTGATCGAATCAAACAAATCATTTTCACAGAAGCAAAT AATCTAAATAATCTCATCGTTAAGATGTGTTGTTATAGAATGTCTTGATT CCAAAAATCTTATTGGGGGGATCTATTTTGAAGGTGGAAGCATAGTTGAT TGGGAGTTTTAATAATGTGGTTGGAATTATAATTTTTGGTGGAACCTTTA CCCCTCTTGCATACTTTGTACTTATTGGCACATTATCCCCGTCTTTATTT CAGGTTTTTGCAGGTAGCATGGCAGCCTTGATCGGAAGTTCTATGGCTTG TCGATCCATTGAATATGAAGCAGGATTGAATGCAAAACATTTAGCTTGGG GAGGTTTGTTGAATTTGATTCCTTATTTCTTTTTCAAAAGATCTCTCAAG AAGAAATATTTTTTAAAGAACATTCTTGAATCTAAACCTGTTGAAATTAG AAATTAAAAAATGTTTATCTTTGAGTTTCCAAAGATTTTCAATTACAATC GAACGATTCTTATCTAGGTAGGTAGATTTCACCTTGAATTTTTTTTTTAA AAGGAAACTTAATCGTCTGAAACATTTTTCTTGGGGTATATATAATTAAA GTTTGCGAAAAATCACTTTTTTAAGAAACTTTGTCACAACATCCTTGGAG TTGACCAGAACGGGGGAACTTCATTACTTACATTACTTCATTGCCTAATA TAAGAAATTTCGTGACTATTCCCGAAAAGTAGTAAGTCATCCATTTGCTA AATCGGCCCTACAGTACTTTCTGTAATTCTATTCTAAAATATTAATCCCA ATCTTTCATTAACTCTAAGAATATTCGCGGTTCTTTGAAGATCGAATTAG AAAGAGTTAACTTGAAATTGATATTTCTTTTTTTTTTTACAATTTTTAGT CCACAGTGGCGTTGTTGGGCTTGTCGTTGCACCCTTGATGTTCTTGGGCG GACCACTCATCTTGCGAGCCGCCACATACACCGCCGGAACCGTAGCGGCG CTTTCACTGACGGCTGCATGTGCACCCGATGAGAAATTCTTATCATGGGG CGGACCATTGTCATTGGGACTGGGTGGAATTTGCGTTGCTTCATTGGGTA AGTCAAGTTTATAGAGTTTCTTATTCGAAAAAATAAATATTTTAGAGACC TCGAAATGGAGGATTACAATCTATTGCTCTCCAAATGCTAAAGTTGGTAT CAATAAAAATTCAAAATTCAAAAAAGATTTCCTTGATTTCTTAGTCAAGG GATAGGTTCAGAAATTGCTTAAAACATTCTACCGCCAGGTCTCATACAAA GAGTTCAGCATGGGTAAACCTAAAATAAAAGAAACAAAAAACTTGATACC TTAATGGTAATAAATTTCGCGTGTTACAATCGCGAAATTTTTTTCAGGAA ACGTGTTTCACATGTATTGAATTTCGCGATTCACTAAATTGGGCATTTTC AAAAAGTGGGAATAAAGAAAGAAAATGGCTGATTTCGCTTGAAACACAAC GTATTGGGTGTAAACATATTAAAAAAGTAACTAAGTGTAACAAAAAAATT CGCGATTTTTGGTCTATTTTGAAATTTTTTCACGTGTATTTAATTTTGTG ATTTTGAAAAATTTAAACGGTATTAAATTTCGCGAAATGTGACCTAAAAA ATCGCGAAATTAAGTACCCGCGAAATTTGTAACACGCGAAATTTAATACC ATTAAGGTAAACCTGTTAAAGGGAACCTTTACTTGACTAAGATACTTACA TTCGAAACTTACAAACGACCCCATCTACTTTCTTAACCAATCAGATGAAA AAGTCAAATTTAATTTTTGAAAACGGTTTCAAATGTCTTGTTTGTAGAGT TTTGTATTGACAATTGACGCCATTATGAAATGCTCCAAAAGGGTTCAAAA TTCTTTAAGGTGGTTCTAGGACCCATATAAGAAACCTGTGTACCGAATTT CAGCCAAATTATTTTTGAAAGGTAAAATCTAACTTGGATCCAAAAAGTGA GTAAATCACCCGGATGTGAAAAGTTAATTTCACACCTTGGAGCGTGAATG ATTTTCCTGCCCCTTTGAATTTCTTTCACGCTCTAAGGTGTGAAATGCAC TTTTCATACCCAGATGATTCATCCATATTTTGTCACCATTTTCCAGGTGG TATGTTTTTGCCAGCCACTTCGGCAGCAGTACCGGTCATCCAATCTTTGG TGACGTACGGTGGTCTTGTTGTCTTTGGAGGATTCATGTTGTACGATACA CAGAAGATCATCAAGAAGGCTGAACTTGCCACGTACAGTGGAAAGAAATA TGATCCTATCAATGCGTAAGTTTATCGTTGGTCGTAAAAAGCCTTCTTTA TACATGACTGTCTTTATGACATTGTACTTTTCGATATCTAATTAAAGGTA CTGTTGTGCGCAGATTTGTAATACTTTCTGCGCAGATTTGTAATACCTGC GCAGATTTGTAATAAACTTTGCGCAAATTTGTAATACTTGAGCTGCGCAG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCTGCGCAGAAAT GTAATACTTCTCTGCGCAGATTTGTAATTTGGAATTGATATTTTCATTGG TAACCAAATTCTATTCTGCGAACAAAATGCATTAAAAATGACTTAGAAAA TAATACCCAAATAAAGTTGTGATTATTGAGCACACCGAATAAATAATCAA TCAATATTTCTTTTCTAAGCAGTGCTTTTATAAGAAATTTATCTGTTAAT ATAAAAATTGTTTATGAGAATAGCGTGGACATAATTTTTATAAGAACTGC TTTTATAAGAAACTAATCAATAACTCGTAAAATAAAAATTATTTGTTGTC GGTAATTGTTTATTTCGAAGTAAACAAGGTACGAAGAATAACATGAACAT ATTTATTTTTTATAAGCACTGCTTTTATAAGAAACTAATTTCCTTTAGAT CAAAAGATATTGATTAGTTTCTTATAAAGTTGATACTTATAAGAAAAATG AAAATACTTAAAATAAGCAAAATCCCATATTTGTATTGAAAGAACCAAGC GCCGAAAGCCAATTTCCATTAGATTAAAAGATATTGATTCGTTTCTTATA AAGTTGATTCTTATAAGGAAAATGAAAATATTAAAATTATTCCCAATCCC ATGTTTGTATTGAAAGAACCAACTGCCAAAAGCCAATTTCCATTAGATTA AAATATATTGATTCGTTTCTTATAAAGTTGATACTTATAAGAAAAATGAA AATATTAAAATTATTCCCAATCCCATGTTTGTATTGAAAGAACCAACTGC CAAAAGCTTATTTTCATTAGATTAAAATATATTGATTCAATTCTTATAAA GTTAATGTTCATACAAAAGATCTACAACCTTTGTGTTTTTTTCTGATTAT TTTCTAAGTCTTTTTTTCGAAACTTTTCTTCGTGGAAAACATATGCCCTC GAAGTAAAAATCTAAATTCCAAATTGCAAATCTGCGCAGAGAAGTATTAC ATTTCTGCGCAGCTCAAGTATTACAAATTTGCGCAAAGTTTATTACAAAT CTGCGCAGGTATTACAAATCTGCGCAGAAAGTATTACAAATTTGCGCAGG TATTACAAATCTGCGCAAGTATTACAAATCTGCGCACAACAGGTACACAG AAGACCTCTTAAATAGCTGGAGTAGTCTTTGAAAAGCTAACCAATTATTA ATGACATTCTCAAAAACCAGTCCTTTTTTCCATTCCTGGGACTGGATTAA GGTCTCATTTGTTAAAAGTCTATGAAATGGGATCGTAACCATAATACTGT AATTGGTGGAAAATAAGGACCTCGAAAAAATTTGATAAGGTGGGGAGCTG GAGTTAATTTGGAGTACACTCTTTTTTTTATTAGCATATGGAAAAATCCG TTCGAGGCTCAATATGCTTAGCAAAGTTTAATTTATGCTTTATTTTATGT GCTTAGACTTCGATTTGTTAGTTTCTCTGGGTTCATGAAAATTTCGAACT ATAAGTCTGCACATTGATCGGTTCAAAGAATGAAAGTTATCTTTGTAATT TGGAGCAGCAGGCGAAAATCTTTGGTCTAAGAAAGTTTAAACAGCTTTAA AAGTAACCCTAAAAAGGTCAGCGTTTTAGAAAAGCAGCACGAATTTTTTT GCATATCAGCTTGGAGGTATGCTTAGCATTATGCTTTTTTTACCGAATTT GACCCCTAGTGTGCTTATAAAACGTTATGCTTATTAAAAAAGAGTGTATC CAAATTGGAATGTTTCCGAAAAATTGAATGACCGTTGCGTATGGTCATTT TTCTCAACATTTCAGATCGATCGGTATTTATATGGATACTATCAACATTT TCATTCGAATTGCTATGATTATGGCTGGAAATAACCGTCGAAAGTAAAAA AGAAGAAGTTTGTTGGTAGATTTTTGAAGAACTTGAAAAATGAAAGTGGT GTTAGTTAACGTTATGAAAGAAGGAGGTTGTATGATGTCAATTTGTTTAT ATTTTTGGTTAAACAGAACATTATGATCCATAATAGCAGCAGGCAATAGT TGACAATACATCGTTTCGACCGTAGTCGCGTGCCACTTAATTATTTGATT ATCCCCCTTAATCGACCGAATCCTTTTTTGACACATTTTACTATTGTCTA TAGGGGCAAAAAAAAGGCTGGTACGGGCAAAAAAAACCCTGCGCGGCAAT TGGCGGCGGCTACAGTCGAAAAGGTGTATTATTAATCATGTGTTTCAAGC CGAAGGCTAGAGGCGAATCTTCAACCTTTTTTTTAAACAAGAAAAAGTGA AAGCCTTAAGGTCTGCGCTGCGTTTCGGAATACAGATTGAATCTACAATC AGTTCCAAAATACTTGGCACAAAAGGGAAATTCCCCACGAAATTTTATAA CCACAAACGATTTGTAAGTGCTCCAAATTAGGTTGGAAAGGTAGAGTTTT AACTCTTGAGTTTTAACGCCAGACCTTAGGATCTGAGGATCCAAAAGTTC AAAAATGGTCCGGTAGGGCTTGAAATATAGCCTAGAAACCAATAAATCCC TCCCAGATCGAAATATTCGATGAAATCAAGTTGAAGGCCCGAAATTGACA ATCTCGCTCGAACTTCAATTTTTGTAAAATGGTAAAATAGCCAAAATTGC CAATATGTTATGGCACTGATTGTAGCATTTCCTTTGCGTTGGCGTTTTTT ATTTTTCAAATTGTTGCGGTGAATGTAATACTTTTGATTCAGCGTTTGTA TGAAAACCATGCGGGCCGTGCAACTTATGTAGGAAATAAGTGGCTTCAAA TCCTACAAAGGAGATTCAACTCTGTAGTCTTCCGCTAAACCGTATTGCTA TTAGCTTCTTAAGTAACCTGAAGTTGTAAAAAAACCTGGATCAACTTGAA CCCATTCTCCTTATAATGTATATAAGACATACATTGTATGTAGACATTCA TCAAAATTAAAAATTCAAATTCCAACATTTCCGAAGGCTTTACTTAGGAA GTCCTTTAAAATGGAGTAATATTTGCATACAAATGCGAACTTATAAACGT CATAACAGAGAATATTTATAAATTTGAAATTTTATAATATTGCAAAATTA ATTTTTTTTTAAAGAAGAACAATGGAAATAATTCAAGTGAAACAAACTTT TTTCAATCCTCGATATTTAGATGATACTAAAATTCGAAAGCTTTTCGAAT GTGATTGTGTATTTATGTACAAGTTAAATGTTTTGCAAATACTACTTAAC TGCCTAAAAATAAAAATGATTTTGCAATAAAAGTTCTTGCCATATTTTCT CACTCAGGATCATGACAACTGTGTAATCTTTCTGAGTTATGCTTACATTT TGCCTTTATGACACCATAACGATTTTGTTACTCTATTACAAGTGTTTGTA TTACAGCAAAGTGGCATTCTGTTTCCCTGCGTTGGTTGCGGATTATATTT ATTTAGGTCTTGATTGTTCGGTTCAATAGATGCAGGGTTTTCGTTTTTCG GTTCAGTAGATGTTGGTTTTTCGTCTTTCGTTTCAGTAGATGCAGGTATT TCGTTTGTCGGTTCAGTAGATGCAGGTTTTTCGTTCGAAGGCTCAGTAGA TGCGGGTTTTTCGTCTTTCGGCTCAGTGGATTCAGATTTTTCGTCTTTCG GTTCCGTGGATGCAGGATTCTCGTCTTTCGGTTCAGTGGATGCGGGTTTT TCGTCTTTCGGCTCAGTGGATTCAGATTTTTCGTCTTTCGGTTCCGTGGA TGCAGGATTCTCGTCTTTCGGTTCAGTGGATGCGGGTTTTTCGTCTTTCG GCCCAGCGGAAGCGGGTTTTTCGTTCGAGGGCTCAGTAGATGCAGGTTTT TCGTCTTTCGGTTCAGTGGGTGCGGGTTTTTCGTCTTTCGGTTCAGTGGA TGTGGGTTTTTCGTCTTTCGGTTCAGTGGATGCGGGTTTTTCGTCTTTCG GTTCAGTGGATGCGGGTTTTTCGTCTTTCGGTTCAGTGGATGTGGGTTTT TCGTCTTTTGGTTCAGTGGAAGCGGGCTTTTCATTCGAGGGCTCAGTAGG TGCAGGTTTTTCGTTTTTCGGTTCAGTGGATGTGGGTTTTTCGTCTTTCG GTTCAATAGACACGGGCTTTTCGTTTGAGGGCTCGTTATTCGATGGAGGT TTTGTAGGGTCGTCCTCCGGCTTCTTTTCGGGGTCTTTTTCTTCAAAAGG GGACTAAAAGAGTAAGTAAACAAAAAAAAATTGAAATATGCACGCATTTG ATTGTAGATTTCATACTGTTTTTTTTTCATGTTAAATTCACAAAATAATA AAGAACTATAACAAATACAAATTACAAACTAAGTTAGTACTCTGAAAATT CTTCAGTAATGGTTGTTACAAAACCCGATTTATGCTTTCAAATAAAATTA TTCTTTGACCTCTTCACATTTGAATTTTTCTTTCAAACTTGGGTTGGGAA TGCATTTCTCGTTTGGTTTGCATGGATTTTTGGAACAAGGTCCAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045296XLOC_045296Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073057-exon-scaffold_86-1575043694:1155257..1155854TCONS_00073057-exon-scaffold_86-1575043694:1155257..1155854Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1575043694:1154850..1154961TCONS_00073057-exon-scaffold_86-1575043694:1154850..1154961Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1575043694:1154303..1154444TCONS_00073057-exon-scaffold_86-1575043694:1154303..1154444Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1575043694:1153652..1153751TCONS_00073057-exon-scaffold_86-1575043694:1153652..1153751Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1575043694:1152908..1153105TCONS_00073057-exon-scaffold_86-1575043694:1152908..1153105Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1575043694:1151690..1151858TCONS_00073057-exon-scaffold_86-1575043694:1151690..1151858Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1575043694:1149396..1149639TCONS_00073057-exon-scaffold_86-1575043694:1149396..1149639Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1575043694:1146959..1149241TCONS_00073057-exon-scaffold_86-1575043694:1146959..1149241Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1510915933:1155257..1155854TCONS_00073057-exon-scaffold_86-1510915933:1155257..1155854Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1510915933:1154850..1154961TCONS_00073057-exon-scaffold_86-1510915933:1154850..1154961Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1510915933:1154303..1154444TCONS_00073057-exon-scaffold_86-1510915933:1154303..1154444Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1510915933:1153652..1153751TCONS_00073057-exon-scaffold_86-1510915933:1153652..1153751Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1510915933:1152908..1153105TCONS_00073057-exon-scaffold_86-1510915933:1152908..1153105Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1510915933:1151690..1151858TCONS_00073057-exon-scaffold_86-1510915933:1151690..1151858Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1510915933:1149396..1149639TCONS_00073057-exon-scaffold_86-1510915933:1149396..1149639Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1510915933:1146959..1149241TCONS_00073057-exon-scaffold_86-1510915933:1146959..1149241Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1491911889:1155257..1155854TCONS_00073057-exon-scaffold_86-1491911889:1155257..1155854Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1491911889:1154850..1154961TCONS_00073057-exon-scaffold_86-1491911889:1154850..1154961Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1491911889:1154303..1154444TCONS_00073057-exon-scaffold_86-1491911889:1154303..1154444Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1491911889:1153652..1153751TCONS_00073057-exon-scaffold_86-1491911889:1153652..1153751Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1491911889:1152908..1153105TCONS_00073057-exon-scaffold_86-1491911889:1152908..1153105Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1491911889:1151690..1151858TCONS_00073057-exon-scaffold_86-1491911889:1151690..1151858Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1491911889:1149396..1149639TCONS_00073057-exon-scaffold_86-1491911889:1149396..1149639Clytia hemisphaericaexon
TCONS_00073057-exon-scaffold_86-1491911889:1146959..1149241TCONS_00073057-exon-scaffold_86-1491911889:1146959..1149241Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1146959..1155854 -
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.145555 5.95394e-06 0.244847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.35007e-05 6.24164e-09 0 0
Blast
BLAST of TCONS_00073057 vs. Swiss-Prot (Human)
Match: GHITM (Growth hormone-inducible transmembrane protein OS=Homo sapiens GN=GHITM PE=1 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 4.863e-71
Identity = 137/264 (51.89%), Postives = 187/264 (70.83%), Query Frame = 1
Query:  592 FRAEKIGQAVLXXXXXXXXXXLCFYGLGLSNDVGAIDKARFWPPEMRSMIKSTYLYFLGSLSITAGSAYYLHRSALVTRMMSGNPWVVFAGSMAALIGSSMACRSIEYEAGLNAKHLAWGVHSGVVGLVVAPLMFLGGPLILRAATYTAGTVAALSLTAACAPDEKFXXXXXXXXXXXXXICVASLGGMFLPATSAAVPVIQSLVTYGGLVVFGGFMLYDTQKIIKKAELA-TYSGKKYDPINASIGIYMDTINIFIRIAMIMA 1380
            F+ +++G+  + G AA G+GALC+YGLGLSN++GAI+KA  WP  ++  I STY+Y  GS+ +TA SA  + R+ ++   M    WV    + AA++G+ M  RSI Y+     KHLAW +HSGV+G VVAPL  LGGPL++RAA YTAG V  LS  A CAP EKFL+ G PL +GLG + V+SLG MFLP T+ A   + S+  YGGLV+F  F+LYDTQK+IK+AE++  Y  +KYDPIN+ + IYMDT+NIF+R+A ++A
Sbjct:   75 FKIDQMGRWFVAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIAISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPYDQSPGPKHLAWLLHSGVMGAVVAPLTILGGPLLIRAAWYTAGIVGGLSTVAMCAPSEKFLNMGAPLGVGLGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLFSMFLLYDTQKVIKRAEVSPMYGVQKYDPINSMLSIYMDTLNIFMRVATMLA 338          
The following BLAST results are available for this feature:
BLAST of TCONS_00073057 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GHITM4.863e-7151.89Growth hormone-inducible transmembrane protein OS=... [more]
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