TCONS_00073055 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073055
Unique NameTCONS_00073055
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2578

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073055 ID=TCONS_00073055|Name=TCONS_00073055|organism=Clytia hemisphaerica|type=transcript|length=2578bp
GTCGATTTGAGAAATTCTTCATTGAAGTGGAGGGAAGTGAACACGAAAAT
CAAAGATGAAGTTGGTCATTTTAATTGCTGCATTTATTCAACTTTCCTTA
GCTGGAAAAGATCCAATTTTGGGCAAAGATGTGAAACTTAGTCCTCAACA
ATTGCCCGGTAAACTTTACTTCGGAGACATGGAACTGAACAAGAAACAAG
AAGATGCCTTGAAGAAAGGATCCAACATGGCTGGCATGCCAAATGATAAC
TCATATGCTGCAGTGCAAGGAGTCAACTTGAGATGGACAAACGCTGTCAT
CCCTTACGTCATTGACTGCTCACTCGAGAACCTTCCCGATGCAGTCGACT
CCATCAAACGAGCTATGGCTGAATGGGAAGCTAAGACTTGCATCCGTTTT
GTAAAGCACACAAACGAAAAATACAAATTGACATTCTTCAGAGATACCCA
CTGCTGGGGAAACGTCGGTATGGTTTCTTACTCTCGTATCTCAGTCGGTT
ACGGATGTGAATATCAACACGTCATGACTCACGAAATTGGTCACGTTGTT
GGATTTTACCATGAACAAAACCGAAAAGACAGAGATCAATACGTCACAGT
TCACTGGGAAAATATTGGTCAATTCAAGAGTGCTTTCGATATTGTCAAGA
ACACAGACTCCCTTGGTGTCCCATACGATTACGAAAGTATTATGCACTAC
CCATGGAACGCTTTCTCTGCCAATGGCCGAAATACCATGACTCCAAAACA
AGATACACGTGGACAGACCCCATATGTAGCCTTGAGTGACCTCGATGCTA
AGCAAACTTCATTGATGTACAACTGCCCAGCCATCGAAAAACAACGCAAA
GCAGCTGCTGCCAAAAGACACATTGGACAAATCGATGTCAAACCTGGAAG
TGAATGTGTCGATAAAAACCAATATTGTAAAGATTGGGCCAAAGCTGGTC
ATTGTTCAAAATCTTCATACACACGTGAACACTGTAAATTATCATGTGGT
TCACCAACCGCATGTCAAGGATCTGACTGTATCGACAAATACGCAGATTG
TCCAGCATGGAAAGACTGGGGACATTGTCATTTGAACCCCACTGTTGCCA
GGGAATGTCAAGCCAGCTGCAATCCATTCTGCAAAGGGTCTCCACCAACC
CAACCACCAACCCAGCCACCAACTCAACCGCCACAAACCCGCCCACCAGT
TACCAAAGCACCCACACAAAAACCAAACCCAACTGGTCCAACCGAAAAGC
CAAAGCCAAATGGAAAATTCCTAGGAACAGGTATCTTGTGCATCGACACA
CACAACAAGTGTGGCGAATGGGCTCAACAAGGAGAATGCAAAGCCAACCC
TGGATGGATGTTACGTAACTGTATGAAATCTTGCAACGTCAAAACTTGCG
ATAAAGGAATCCAAAAACCTCAAGGACAATGTGCTAATCCCCTTGGTTTG
GCCATGGACGAGCGTGGTCAATACAAAATCCCAGATAGCGCTTTTTCAGC
ACCTACTGGATGGTTGGCTCCAGgaGCTGGATGGGAAGCTTCCGCCTCAA
ACGCCCGTCTCTACATGGGTGACGATTATGATAAAAAACGTATTGGTGCA
TTCTGCTCCGCCTCACACGATGCCGCCAAACAAGCCAATGGATACGTTCA
AGTTGACTTGGGAAAACAAAATACCATCCGATACATCGCTACACAAGGTC
GTGACAAATATTTTGAGagaatcgagaaattcaagatcTCATACAGTAAT
GATGGAAGCAACTTCCAAATGTACCAAGATGGAACCGGACAAGATAAGCT
TTTCGACGGTAATTGTGATCACGTGACACCAGTCTTGAACCAATTCACCA
CGCCCATCAAAGCTCGATACATCCGATACCATCCATGGAACTGGAACTAC
CCATGTCTCCGTATGGAATTGTACGGTTGttaagaaaaattatgaaaaat
tatgaaaaacattgaaacaTAGAATTATTGTAGAAATCAAACGTGAAATA
TAAATCTTATTTTTCTCGAAGTAataccattttttgaattttttttgact
ttgaaagAGATGAATCTCAAAGCACAATGCCCTATACTAGGAAAGATTCA
ATATCTTTAGGGTAGGAAAATCAATAAGCTCACTGGTTCAAAAATGATCC
CTGGTCAATTCTTACCAAACAAAAATACATCAATTTTAATGCACCAGTGA
AACAGCAAGACCACATGGGTACTGATATTAACTTGATGAGGAGTCTCATT
ATATATAGTTGTATTAATTAAACATTCATTAAGCAAGGTGATAAATACAT
ATGTTTCTCAAATTAAATTAactagattttgaaaaagattagGTCGACCC
TGTGTATTTCACATCACTAGGATATCTTGTAACCTTGTAAAAGTCCAATG
CCAGAAAGAAATACAAAGTATTCTTAAAAGTATACCCCCTGTTTAATCCA
AATTAAAGGTCTTTGGTTTTGAATATTGTGTTTAAGTCCCaaggggctag
agaggaatcccCTTCCTCAAACAAGGAAAAGTCCAGCCTCAATATTTGCG
CCGCATTACCATTAGGAATGACGGCTGG
Run BLAST on NCBI

transcript from alignment at scaffold_86:1090236..1103447-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073055 ID=TCONS_00073055|Name=TCONS_00073055|organism=Clytia hemisphaerica|type=transcript|length=13212bp|location=Sequence derived from alignment at scaffold_86:1090236..1103447- (Clytia hemisphaerica)
GTCGATTTGAGAAATTCTTCATTGAAGTGGAGGGAAGTGAACACGAAAAT CAAAGGTAAGATTTTTAAAGCCTTACCTTTAGAATTGGTTTAATCTTTTT GAAAAGGTGCCTCTACCTAACTCGTCTACCTTAAAGGAACAAATTTTTGC GGAATTTAATTTCGCGGTTCACAGGTAAAATTCGGAAGTTTCGCAAAATT TAATATCGCGGTTAAGAGGATATTTTGTATAAAATAAGACCTATTCTTCC CTAAAAAGATTAATTAGATCAATTTATAGGTGATTTTCTAAACCATGAGA ATATTTCGTGCTTCACGGAATTCAATTTCGCAGATTTCTCGATAAACCAC GAAAGTAAATTCCACAAAAATTTATTCCGCGAAAATCCAGTGGGGATGGG TTTGAAGTGCAATTTTTGAATATTGAATGGAACCCACCAAGTCAAGANGA ATCACGGCATGTGCCGCCCTTAGGGTAGGTACTTTTGATAGAGTGTACTA CAAGGATCTTCTTTTAGCTGGATACACTGTAAGGGTGTGTTTGGGGAATA CTGAATTGCAAGACTGATAGTAAAGATCTGATGTATTTTTATAGTTTTGA CTCGCACATTGTCGACATATCAGGCTCATTTTAGGAGAATAAGACATGCA GTCAAACTACACTGTAAGGGTCAGAAATTTTCTGTAATATGCACTGTCAG GGTACGTTTTCACTGCTCAAAAGCTGCACTGTAAGGGTCCCATTTTGAAA GCCATATTTTTGGCGGCGCATGCCGTCGTTTAGAAATCGAGTGCCCCCTC CCACCCCCTCACCCCGGTAACGATGGGGGTAATTTACTTGCAAAACAACA ATTTAAGAAATCGCTTGATGAATCTAATTGTACTTAGGCAAAAATCTGTG ACGCCCCTTTATGAACCTGTTTTGTTATTTACCCAGTGTCTAGAATTATA AATAAATCTAATAAAACAAATCTGAAACAAATTGTTGATAGTTCTTCTTT CTATAGCATAAAATTTCTACCCACATACTGGTAGTGCAAAGAAAATTTCA ATTAATTCAATTGACTATCAATATTTATCGATTGATAATTTAATAAGTGG GAGCCGAGTGCAAAATTGAAAATGAGGCAGTATATAAGATGTGTCGATTT GAGAAATTCTTCATTGAAGTGGAGGGAAGTGAACACGAAAATCAAAGGTA AGATTTTTAAAGCCTTACCTTTAGAATTGGTTTAATCTTTTTGAAAAGGT GCCTCTACCTAACTCGTCTACCTTAAAGGAACAAATTTTTGCGGAATTTA ATTTCGCGGTTCACAGGTAAAATTCGGAAGTTTCGCAAAATTTAATATCG CGGTTAAGAGGATATTTTGTATAAAATAAGACCTATTTTTCCCTAAAAAG ACCAATTTATAGGTGATTTTCTAAACCATGAGAATATTTCGTGCTTCACT GAATTCAATTTCGCAGATTTCTCGATAAACCACGAAATTAAATTCCACAA AAATTTATTCCGCGAAAATCCAGTGGGGATGGGTTTGAAGTGCAATTTTT GAATATTGAATGGAACCCACCAAGTCAAGAAATTCATGAAACAAATCAAG TCAGATTTTGAAGTTACTAATACATTGCTTCTCTGTTCAATTATAGATGA AGTTGGTCATTTTAATTGCTGCATTTATTCAACTTTCCTTAGCTGGAAAA GATCCAATTTTGGGCAAAGGTAAGCAATCTACTTCCCAAAAAAGAGGTTC TAAAAGTTACAAAGGTTTGACTCAAAATCAAGGTTTAAAAGGCTTTTGAA TAATTAAAGGAAGGGCTTAACTTTTGATCAAACGCTTTCTTTTAGAGACA TGGCATTTGGTAGAGTACTAAACTAGGGGCTAAACTGTGCTTTCATTTTT TAATGGAGATGAAACAGCAGACTTGCCTTAGTAATATTCTACAGACAGAA GCTAAATTGATCGAACCCTGTCTTCAACAATCACAGGCTAAGCTTCGGTT TCATAAATTAAAACAATCACACGAAAATTTCAAAATCTATTATTTTCCTT ACAGATGTGAAACTTAGTCCTCAACAATTGCCCGGTAAACTTTACTNCAC GAAAATCAAAGGTAAGATTTTTAAAGCCTTACCTTTAGAATTGGTTTAAT CTTTTTGAAAAGGTGCCTCTACCTAACTCGTCTACCTTAAAGGAACAAAT TTTTGCGGAATTTAATTTCGCGGTTCACAGGTAAAATTCGGAAGTTTCGC AAAATTTAATATCGCGGTTAAGAGGATATTTTGTATAAAATAAGACCTAT TCTTCCCTAAAAAGATTAATTAGATCAATTTATAGGTGATTTTCTAAACC ATGAGAATATTTCGTGCTTCACGGAATTCAATTTCGCAGATTTCTCGATA AACCACGAAAGTAAATTCCACAAAAATTTATTCCGCGAAAATCCAGTGGG GATGGGTTTGAAGTGCAATTTTTGAATATTGAATGGAACCCACCAAGTCA AGAAATTCATGAAACAAATCAAGTCAGATTTTGAAGTTACTAATACATTG CTTCTCTGTTCAATTATAGATGAAGTTGGTCATTTTAATTGCTGCATTTA TTCAACTTTCCTTAGCTGGAAAAGATCCAATTTTGGGCAAAGGTAAGCAA TCTACTTCCCAAAAAAGAGGTTCTAAAAGTTACAAAGGTTTGACTCAAAA TCAAGGTTTAAAAGGCTTTTGAATAATTAAAGGAAGGGCTTAACTTTTGA TCAAACGCTTTCTTTTAGAGACATGGCATTTGGTAGAGTACTAAACTAGG GGCTAAACTGTGCTTTCATTTTTTAATGGAGATGAAATAGCAGACTTGCC TTAGTAATATTCTACAGACAGGATAAATTGATCAAACCCTGTCCTCAACA ATCACAGGCTAAGCTTCGGTTTCATAAATTAAAACAATCACACGAAAATT TCAAAATCTATTATTTTCCTTACAGATGTGAAACTTAGTCCTCAACAATT GCCCGGTAAACTTTACTTCGGAGACATGGAACTGAACAAGAAACAAGAAG ATGCCTTGAAGAAAGGATCCAACATGGCTGGCATGCCAAATGATAACTCA TATGCTGCAGTGCAAGGAGTCAACTTGAGATGGACAAACGCTGTCATCCC TTACGTCATTGACTGCTCACTCGGTAAGATAATATTTTAATGTTTCATCT ACTTCCTTCAAACCAACTTATTTCCGAAAAGGAGTGTTGAACCAATGACA CTTAATAATTCTTTAATGATTCCCCTTTAAGAAAGTAAAAAGATTCAAAC TTACAGTGTGCATCTTTTCCAGGGTTTTAGCAGGTTTCCCAATCCACAGT ACTTTTGAAAGAATTCCCTCGTTGGTTGTATTAGCCTCCTCAATGATTAC CTGAAGTAGCAAAATACAGATAATTTGACTACCGGGTGTCCCAGAAAAAA ATTCCGCTCTTTGAAGTGAATGTTCTCGAATTCTATGAATTTCTAAACAA TCAATCCTTTTGCATTGGAAAGAAGGAGGATAAACTTAAATTTTGAGGGG TCATTTATTAAATTTGGTCAACTGGATCAAAAGTTAAGCCATAATGAATG AAAAATTATTTTTTTGTAATTGCTCAAAAACGTTGAAAATCGACCTATCG AATTGTGATAGAAGCATGATTGCATGGAGCATGATTTTCATTGTTGAAGT AATAAAAACCTAATAAAAGTATCTTTTTATGAAAAAAGAAGTAAAATTTT AAGTGAAACAAAGAAATTTATCTAAAAATCTGAAAAGTTTGATAATTCCA ACGGATAATTCACTTCAATGGCTACACTGATGAAATCAACGCTACTTTTG ACTTTCCGGGTGCATAGGCCAAAACTTGAAGCTAAACTCCATAGAAAATA ATTTGAAATGACCCAAATGAAAATCTTTAGCCCTTTAGAAATTATTTCAA GCATTTTTTGTTTTCGTGTCCACTTTAAACTCTTTATTCCTGCAAAAAAG TAATAATTAGGTTATAAAATTTGATGGGTCGATTTTCAACTTTTTCGAGC ATTTTCAAATAATGAAACTTTTATTCATTTCAGCATAATATTTTATCTAG TTGACCAAATTTGATAAATGACCCCTCATAATTTAAGTTTATCCTTCCTC TTTCCAATGCAAAAAAGATTGATCATTTAAAAGTTCATAGAACTCGAGAA AATTCACTTCAAAAAGTGGAACTTTTTTCTGGGACACCCGGTATTTTATA CTGATATATACCAGGATCTACCTAGCTCTACTTAGAGAGTTCACTTCACC AACGTCAAAAGAACCAACCAGCCAGCGGAGTCCCTGATGGCACACCAAAA TGAAATTCTAATTACGCCAACCCGCCAAAAATATTCTGCCATCACGTCAT TACACCGAAAAAAGTCTCCTATTAATCACGTATAACGCTTTTTGAAATTA TTCATCACGCCATCACGCTAAAAAAGGCCGAATAAAACCATTGCGAAAAC CGCTTGGAGGTTTCTAAAAGGTAGCAAAAGTACAGCTCAAGAAAAAGGGT TTTGAAAAAGTGAGATTATACTGTAATAGCTGGGCTATATCACAAGATTC TATCTTTCTTTTTTTTACCAGAGAACCTTCCCGATGCAGTCGACTCCATC AAACGAGCTATGGCTGAATGGGAAGCTAAGACTTGCATCCGTTTTGTAAA GCACACAAACGAAAAATACAAATTGACATTCTTCAGAGATACCCAGTAAG TCTTTTTGCTAAACACCCATGTCTTACAGCTCCGGTGGAACTTTTTACCT CAGTATGGCGATAAACCCAATGTGGATAGAAATTCTATTGTTCCAAGGTT AAAAAATCCAGTGGGGATGGTTTTGAAGTGCAATTTTTGAATATTGAATG TCGAATGGGGATAAATCAAAGTCAATTTCCAAGTGGGGCTGAAATTTCAG GATATATTCCCACCGGTGACGAAATTTTAAAAAACCCGTCCCAGCGGGTC TGTGACACAGGGGTGTGCTTAAGTCTTCATTTTAGATAATACACCTATCA AAAACGAGAAAAGGCGTTAGAGTTTACCAGGGAGACATTACGTTAAAAAG TCCATATCTGCCAGAGCATCAATTCTTAATGACATGACATTCTGCTTCAA CTCGTCTTGGTAACCTAAAGATCGCTTTCCTCACGCTAGTGTTTTTGCAG TCAGATGCAGCAACGATAGATGTTGGAGAGTGGGTTAAAAACCTCCAAAA ACTAAAGATTTTGGTANACGCTAGTGTTTTTGCAGTCAGATGCAGCAACG ATAGATGTTGGAGAGTGGGTTAAAAACCTCCAAAAACTAAAGGTTTTGGT AGAGACACAGCTCATTTTGAATTCAGGTTACCAACTAAAAGGCAACTTCA ACTACTTCGTAGTCTAAGGGTTATATCTAAACTACTAAGGCGTCTTCTTT CAGTACATTGAAACGATTATTCATTTATAGCTGCTGGGGAAACGTCGGTA TGGTTTCTTACTCTCGTATCTCAGTCGGTTACGGATGTGAATATCAACAC GTCATGACTCACGAAATTGGTCACGTTGTAAGTTTTATTGAGCAGATTTT CTTCGTTGTGCCGACAGACCTTTTTGTTTTCCAGTAACCCATAGACATAG ATTAGTAATATACAACATGGTATCTCTTTCGAAATTATTCGAAGAGCTAG CAGCAAACTTTTTTTTACGTTTTCAATTTCTTATGATTTCAAATGGGCTA TTCCAGAAATAAGTACTTACCCTTACAATACATTTATCAAAAGTCCACCC TTACAGTGCATTTCTGCTATTTTCAAAAACATACCCTTAATCGACGCACA CATACCCGTCGGTCAATCTTTCTAACTCCACTCCGTGTTTCAACGTCAAC ATTTCTAGTACCGATCAACTCTTATCATCGTTTGATAGATGTTTTTTTTA CGTTGCAATAATAGTCTCTCACTGAAAGGGTTAACCCTTTCCGGACGCAC GGGCCACTGGGTGGCCCATGAATCGTGTTCCTATATGACGCAGGGGCCAC CGGGTGGCCCATAGCTTTGTAAAAGATTTTAACCGTTTTCGCGCCAAAAT ACAATAACATGGTTTTGAATAATGATTTTGAGATAAATTTCCCGTAANNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCCTTTTACTCTATTTCT TTATTCAAAGTCAAAAATTTTGCCTTTCCGAAAAAAAATCTGCCGATTTT TCGGTCACGTGACCAGGTGTCAGCCATATTTAAAATTATTTTTTTGGTTT TTCAAAACCCCTTTTACATGTGAAAAAAACGAGGTATTACTTATCGTGAT ATCTTTTATCAATCACTTTCTATTGCAATTTTAGTGAAGCCAGTCAAAAA TCAAATTTTTGTTTGCGTCATATAGCCGTGAAATCATGCGTCCGGAAAGG GTTAAGAAAAGACAGGTAATTTCTAATGTTTGTGCTTTGTGCTAGCGTAC CACCAGTTAACGTGATAAAGCCTGAGATTCATTGGGTTGAGATTCCTACT GTAGGCAGGTTTATGAAATACACATGATTTGTTTTCCTCCGTAAACACAG TCTCGAATCTCATTAGTTTTCATAACTGAATGGTTTACTCAGAAATGGTT TTCAACCGTATTGCCTGTAGGCAAATACTAGTTTTCATATTTTCTAGGTT GGATTTTACCATGAACAAAACCGAAAAGACAGAGATCAATACGTCACAGT TCACTGGGAAAATATTGTAAGTTTTTTTCGAGAAAATGTTTACCTAACGT CACAATTTCTAGCTACGATCATCTCGAGAGAACTTAATTCTTAGAAAGTC CTAGCAACAGAGCTAAAAAACACAATAATTTCTGTTAGTGAGTGTCCTCT TAAGCAATTTTTGCAAAAGCGACACCATTGCAATCTTTCAAAAGCTTTAA AAAACAATAGCAGTGGCGTCAAATCATCAAAGAAGTACAGTACAAGCCAT GAATGTCTAGTATAACGTTTAGCTGTAAGATAGGGTTTTATTCCAGATAG AAACATAAAAGTTTTCGGAGTTACTCAAAAAAGTAAAAAAATATTGTTTG ATAGAATGTCCCATTATATTCCATCCATATCTTTAAAGTTCATTGCAAAC GAATTTTTTATCTTGAATTCCAGGGTCAATTCAAGAGTGCTTTCGATATT GTCAAGAACACAGACTCCCTTGGTGTCCCATACGATTACGAAAGTATTAT GCACTACCCATGGAACGCTTTCTCTGCCAATGGCCGAAATACCATGACTC CAAAACAAGATACACGTGGACAGACCCCATATGTAGCCTTGAGTGACCTC GATGCTAAGCAAACTTCATTGATGTACAACTGCCCAGGTGAGATTTTCAA CATTTACTTAATTTAATTATATTGCCTGCTAACGTTAAAGGGTATATTAC GTACACGTCATTAAGCTATAATTGGTAAGCTTTTTCTAGACTCTCAATGA TACAACATAGAAGTAGAGAATAAACTTGCAGGCCCGGTGGAAGCGGGGAG ACTTGAGCCTACCCAACTTTGAGCAAATGACATTTTTTTATCAAATTCCA AGCGAATTTTATCTCATTTTGAGCCTTCAGCCTCCCCACTTTTACGGTTG TTCCACCGGGCCTGACTTGTGTATCAGTAAAGCAATTATCTCGATCGGAG AACCAAACCCATTTTGGGAATTTGCCCTCTTCTGGAAACGAAGTAGTTCA TTTTTCTTGACATTTATACATTTGACGCAATCACGCAAATATACGTTCCA AAGAGATATTTTTGCCTTCAATTTTCCCGTGGTCAGTATATACTGTATCA GAAACCTTTGCAGATAAAAATATCTTTTAAGAGAAGTCTGATACAGGACC GTTTCTTGATCGAAGTATTTTACTTTACGCTGTACAAAAGTCACCATAGC AAAATATTTTACCAAAACGCAAAAGAAGACTTGTTACAATCAAAAATTTA TTTCGATTCTATTTCAGCCATCGAAAAACAACGCAAAGCAGCTGCTGCCA AAAGACACATTGGACAAATCGATGTCAAACCTGGAAGTGGTAAGCGATTG ACAGATTATCTAAAGTGAAATCTATTCATTCACTCAAATCTTCTGTCAAG TCCCAGTTGGCCATTGAAACTGTGACAACCATTGAAAGACTGTATACCAT TCTAATAAAATATTTCTAACAATCTAATCCAAGGCCATAAGAGGTCCGAA AAAGAAAGCGCAGAGAAATTTCTGGAATACCTCAATACAAATTTATCAAA CCACAATTTATTTGTGTTGTTTTAGAATGTGTCGATAAAAACCAATATTG TAAAGATTGGGCCAAAGCTGGTCATTGTTCAAAATCTTCATACACACGTG AACACTGTAAATTATCATGTGGTTCACCAACCGCATGTCAAGGTAAACAT ACAATCGAGTTTCAAAATTTCCATGTGCAAATCCTTTTGAACTAATCATT AGTCCCTTCAAAGAATCTCAAAAACAAAAACCTGAATCTCACAACCATTT CAATATAAAATTAGACTTTCCGTTGAGGTTTAAAATTAGAGAAACACAAA TGCACCATATACATACGCAAACACCACATTGCATTGTTTTCTGACATTGC ATCATGGATCAAACAGCTGATTTGTTGCAATTAACGTATTGTCTGATTTT ACGTCACTCATAGCCAATCAGCTGTTGGATTTGTGATTTAATGCCAAAAG TTATTGCAAAGGTGCATATCAAGAATAGATGACGATCAGGGAAATAATTA GAAATAAAGAAATTAATGCTAAAAGAGTACCTTGTGTGCGATTCACTTTT TAAACCATTTGTTCTCTCTCTCATAGGATCTGACTGTATCGACAAATACG CAGATTGTCCAGCATGGAAAGACTGGGGACATTGTCATTTGAACCCCACT GTTGCCAGGGAATGTCAAGCCAGCTGCAATCCATTCTGCAAAGGTAAGCG TTCATACAGGTTCATAAGATAATTCATGATATTCATTACGTAATGTTATA AACAGAGGTACCTAAAACGACCGAGTGTTTGCAACTGATTTTCACTTTAA ACAATAAGACTGGTGGTAAACGTCCGGGCTATTTTGAGTGCTTCCGTATG AAACATTCACGTCTTGAATACCATGAATTTAATTTATAGTCCATTCACTA TCATCTGGATAACCGTTAACGACTTTTAAGTAAAAACTTTTCTTTTCACA ATCAAAACAAATAATTTGAAGAACTTTATTCACATGGTAGTGGACTGAAT GAAATTATCTGACAGTATCTGTTAGAAATGTGAAGATATTTATTGTTTGA AGATCAACTTTGGCTAAAAGCAAACTGGCTTCGTTTTGGTGTGATGTGTC TGTATGTAATAGAAATGCCAGTACTAAAACGACTGGAAAAGAAAAGCTTA GAAAACTCTGAATAATCTAAGCAATAACAAATATCATAACGAATTACCTC GACCCTTTTACAATCATAGGGTCTCCACCAACCCAACCACCAACCCAGCC ACCAACTCAACCGCCACAAACCCGCCCACCAGTTACCAAAGCACCCACAC AAAAACCAAACCCAACTGGTCCAACCGAAAAGCCAAAGCCAAATGGAAAA TTCCTAGGAACAGGTAAAGTTTTTGTCAGAGTAATGCATTTAACCTTTTA GCGAGTCAACCCTTTTTTAAATGGCCAAAAAGACGAGCTTAAAAAAACTT AAAAAGTTAAATTTGAAGAGACTCATATTCATGATATCCACCATTGTAAT GTCTTCCACGGACTCAACAGCTGATGTGATTGGTTGTAAGTAGCGTATTG ACTGATTTTACGTCACTTAAAACCAATCAGGTGCTGGGTCCGTGATGTAA TGTCAGAAGACATTGTAATGGTGCATATCATGAATATGTGAGCTCAAGTA TCATAAACTGATAAGATTCCTGCAACTTCTTTTACAGAAAGCAATAGACT CTAGAAGCAAAGCTGTTTACCTTTCTCATTCTCATTGGTAATTTCAGGTA TCTTGTGCATCGACACACACAACAAGTGTGGCGAATGGGCTCAACAAGGA GAATGCAAAGCCAACCCTGGATGGATGTTACGTAACTGTATGAAATCTTG CAACGTCAAAACTTGCGATAAAGGAATCCAAAAACCTCAAGGACAATGTG CTAATCCCCTTGGTTTGGCCATGGACGAGCGTGGTCAATACAAAATCCCA GATAGCGCTTTTTCAGCACCTACTGGATGGTTGGCTCCAGGTTAGTGAAT GGGCTTTTCCAGAAAACATTTTTACTCCGCTCACTGTTTGAGAATATTGA TTTTTCGAAGTATTGAACCCCCTGGATATCCTCTCTTATAAAGATGCTTA CCCCTAGATATCGTATTTTTTAACTTGAAAATACACTTTACCCCCTTACT CCCTTGTAGATATTTAACCCTCTGAATATCCACTTTTGAAAAGAAATCGT TAACCCCCTGGTTATCCGACATCCTCAACAGGGGGCGACACGGAAATTTT CTGGAAAAGGCCAATCTTTCGTTTAGAATATCCAAGAGGCTATTGACAGT ATCTGTTAGAAGTTGCAGCACATTGGCGATATATTCAAGAGGCTTTGGAA TGCCTTTAAGCCTGAATGGGAGTATAAGAATATATTAGACGTGATTTTGG TTTAAAAAACCAACTATAGAGACGAAAACAGATCCCTGTAATTCTTTAAT GTAAAATAACAAGCTGATAATTCAATCCTCGTGATTTCACGAGTCAAAGT CAATCAATATCAACAAAAATTCAAACTCGTCAAAAATGATAACCTTTGCT AATCTCAACAAAAGACTTACCAACATTTTTCAATTTTTCTTTTTTCTAGG AGCTGGATGGGAAGCTTCCGCCTCAAACGCCCGTCTCTACATGGGTGACG ATTATGATAAAAAACGTATTGGTGCATTCTGCTCCGCCTCACACGATGCC GCCAAACAAGCCAATGGATACGTTCAAGTTGACTTGGGAAAACAAAATAC CATCCGATACATCGCTACACAAGGTAAGCTTTTTTTGATAACACCTTAAA CGGTAACAGAAAGAAAACTGGTAAATTCGAGATAAGTCTAAAATACTAAT TCAGTTGACACACTGTTTTTCACAACATCCATGAACGTTAGATGAACGTT GAATGAAACAGCGTTGTGTGCCAGCTGGATTACAAGGTGTTATGGGGAGC CAGCATGTAGTACACCCCCTTCTCACAGACCCACTGGATAAATTGACCAA AATATTGTCTCCGGTTGAAAATTGTCATCCGATTTTCGTCTCACTGAAAA TAACCAAATAAACCAATCCTCGCTACAAAATATTTACTATTTTTCCAGTC CCCAATGAATTTTCTAACTTGAAAACAAAAGAATATCGATCACCATCCAT AAAAAATATGAGAAAACCGATCCCCATCGAGTTTCAGCCCGTTATTTTTA TCCCCATTGGCTAAAAAAATCCTACTAGGTCTGTGAGAAGGGTAGTATGA CAACATAGTACAGAAGAGCAATCTCCAATATACTAAAATATTTACTTTGA TTGATATTGATGGATAGATTAAACTGTTATTGATCAATGTTTCTTCACCA CATCCAGGTCGTGACAAATATTTTGAGAGAATCGAGAAATTCAAGATCTC ATACAGTAATGATGGAAGCAACTTCCAAATGTACCAAGATGGAACCGGAC AAGATAAGGTATGATAGAAATCTTTCAAACTAATCTTGAATAATCTAAAT AAGCTTGAGTTTATCGACCCAGTGATATTTAGAATTTCTAAGTAGCAATG AACTGACCAAACCAGATTCTGAAGTTTATTTCGAGATCAAGTTACCAAGA ATAATCATTGTTTTATATCCGCCAAAAACAAAAAGACATATTTCGATAAA ATTTCAAATGATTTCTTAATTTCGAAATAAAAGATGGATATGTTTTTCTC TAACCTTTTATCTATATTTTCATCTTCTTTAGCTTTTCGACGGTAATTGT GATCACGTGACACCAGTCTTGAACCAATTCACCACGCCCATCAAAGCTCG ATACATCCGATACCATCCATGGAACTGGAACTACCCATGTCTCCGTATGG AATTGTACGGTTGTTAAGAAAAATTATGAAAAATTATGAAAAACATTGAA ACATAGAATTATTGTAGAAATCAAACGTGAAATATAAATCTTATTTTTCT CGAAGTAATACCATTTTTTGAATTTTTTTTGACTTTGAAAGAGATGAATC TCAAAGCACAATGCCCTATACTAGGAAAGATTCAATATCTTTAGGGTAGG AAAATCAATAAGCTCACTGGTTCAAAAATGATCCCTGGTCAATTCTTACC AAACAAAAATACATCAATTTTAATGCACCAGTGAAACAGCAAGACCACAT GGGTACTGATATTAACTTGATGAGGAGTCTCATTATATATAGTTGTATTA ATTAAACATTCATTAAGCAAGGTGATAAATACATATGTTTCTCAAATTAA ATTAACTAGATTTTGAAAAAGATTAGGTCGACCCTGTGTATTTCACATCA CTAGGATATCTTGTAACCTTGTAAAAGTCCAATGCCAGAAAGAAATACAA AGTATTCTTAAAAGTATACCCCCTGTTTAATCCAAATTAAAGGTCTTTGG TTTTGAATATTGTGTTTAAGTCCCAAGGGGCTAGAGAGGAATCCCCTTCC TCAAACAAGGAAAAGTCCAGCCTCAATATTTGCGCCGCATTACCATTAGG AATGACGGCTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045295XLOC_045295Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073055-exon-scaffold_86-1575043694:1103393..1103447TCONS_00073055-exon-scaffold_86-1575043694:1103393..1103447Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1101729..1101801TCONS_00073055-exon-scaffold_86-1575043694:1101729..1101801Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1100275..1100472TCONS_00073055-exon-scaffold_86-1575043694:1100275..1100472Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1098703..1098826TCONS_00073055-exon-scaffold_86-1575043694:1098703..1098826Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1097871..1097967TCONS_00073055-exon-scaffold_86-1575043694:1097871..1097967Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1096282..1096350TCONS_00073055-exon-scaffold_86-1575043694:1096282..1096350Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1095661..1095874TCONS_00073055-exon-scaffold_86-1575043694:1095661..1095874Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1094959..1095030TCONS_00073055-exon-scaffold_86-1575043694:1094959..1095030Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1094606..1094722TCONS_00073055-exon-scaffold_86-1575043694:1094606..1094722Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1094055..1094171TCONS_00073055-exon-scaffold_86-1575043694:1094055..1094171Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1093385..1093528TCONS_00073055-exon-scaffold_86-1575043694:1093385..1093528Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1092758..1093000TCONS_00073055-exon-scaffold_86-1575043694:1092758..1093000Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1091975..1092148TCONS_00073055-exon-scaffold_86-1575043694:1091975..1092148Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1091290..1091390TCONS_00073055-exon-scaffold_86-1575043694:1091290..1091390Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1090236..1091015TCONS_00073055-exon-scaffold_86-1575043694:1090236..1091015Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1103393..1103447TCONS_00073055-exon-scaffold_86-1510915933:1103393..1103447Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1101729..1101801TCONS_00073055-exon-scaffold_86-1510915933:1101729..1101801Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1100275..1100472TCONS_00073055-exon-scaffold_86-1510915933:1100275..1100472Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1098703..1098826TCONS_00073055-exon-scaffold_86-1510915933:1098703..1098826Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1097871..1097967TCONS_00073055-exon-scaffold_86-1510915933:1097871..1097967Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1096282..1096350TCONS_00073055-exon-scaffold_86-1510915933:1096282..1096350Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1095661..1095874TCONS_00073055-exon-scaffold_86-1510915933:1095661..1095874Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1094959..1095030TCONS_00073055-exon-scaffold_86-1510915933:1094959..1095030Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1094606..1094722TCONS_00073055-exon-scaffold_86-1510915933:1094606..1094722Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1094055..1094171TCONS_00073055-exon-scaffold_86-1510915933:1094055..1094171Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1093385..1093528TCONS_00073055-exon-scaffold_86-1510915933:1093385..1093528Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1092758..1093000TCONS_00073055-exon-scaffold_86-1510915933:1092758..1093000Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1091975..1092148TCONS_00073055-exon-scaffold_86-1510915933:1091975..1092148Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1091290..1091390TCONS_00073055-exon-scaffold_86-1510915933:1091290..1091390Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1090236..1091015TCONS_00073055-exon-scaffold_86-1510915933:1090236..1091015Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1103393..1103447TCONS_00073055-exon-scaffold_86-1491911889:1103393..1103447Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1101729..1101801TCONS_00073055-exon-scaffold_86-1491911889:1101729..1101801Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1100275..1100472TCONS_00073055-exon-scaffold_86-1491911889:1100275..1100472Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1098703..1098826TCONS_00073055-exon-scaffold_86-1491911889:1098703..1098826Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1097871..1097967TCONS_00073055-exon-scaffold_86-1491911889:1097871..1097967Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1096282..1096350TCONS_00073055-exon-scaffold_86-1491911889:1096282..1096350Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1095661..1095874TCONS_00073055-exon-scaffold_86-1491911889:1095661..1095874Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1094959..1095030TCONS_00073055-exon-scaffold_86-1491911889:1094959..1095030Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1094606..1094722TCONS_00073055-exon-scaffold_86-1491911889:1094606..1094722Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1094055..1094171TCONS_00073055-exon-scaffold_86-1491911889:1094055..1094171Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1093385..1093528TCONS_00073055-exon-scaffold_86-1491911889:1093385..1093528Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1092758..1093000TCONS_00073055-exon-scaffold_86-1491911889:1092758..1093000Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1091975..1092148TCONS_00073055-exon-scaffold_86-1491911889:1091975..1092148Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1091290..1091390TCONS_00073055-exon-scaffold_86-1491911889:1091290..1091390Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1090236..1091015TCONS_00073055-exon-scaffold_86-1491911889:1090236..1091015Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1090236..1103447 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0019546 0.00526675 0.00191844 0.00188187 0.000846274 0.000569072 0.00748962 0.00222655 0.00189402 0.00137529 0.00396081 0.00618436 2.86377 0.786348 11.844 47.462 12.6293 4.88398 34.2304 32.6813 26.8203 45.7904 52.5839 68.3649 64.4088 70.585 0.00698609 0.00598779 0.018468 0.0875756
Blast
BLAST of TCONS_00073055 vs. Swiss-Prot (Human)
Match: TLL2 (Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.713e-29
Identity = 76/195 (38.97%), Postives = 104/195 (53.33%), Query Frame = 2
Query:  284 WTNAVIPYVIDCSLENLPDAVDSIKRAMAEWEAKTCIRFVKHTNEKYKLTF-FRDTHCWGNVGMVSYS--RISVGYGCEYQHVMTHEIGHVVGFYHEQNRKDRDQYVTVHWENIGQFKSAFDIVK----NTDSLGVPYDYESIMHYPWNAFSAN-GRNTMTPKQDTRGQTPYVA----LSDLDAKQTSLMYNCPA 832
            W   VIPYVI  +      A+   K+AM  WE  TC+ F++ T+E+  + F +R   C   VG        IS+G  C+   ++ HE+GHVVGF+HE  R DRDQ+VT+  ENI Q    ++ +K       SLG  YD++SIMHY  N FS     +T+ P+QD  G  P +     LS  D  Q   +Y CPA
Sbjct:  159 WPGGVIPYVIGGNFTGSQRAI--FKQAMRHWEKHTCVTFIERTDEESFIVFSYRTCGCCSYVGRRGGGPQAISIGKNCDKFGIVAHELGHVVGFWHEHTRPDRDQHVTIIRENI-QPGQEYNFLKMEAGEVSSLGETYDFDSIMHYARNTFSRGVFLDTILPRQDDNGVRPTIGQRVRLSQGDIAQARKLYKCPA 350          
The following BLAST results are available for this feature:
BLAST of TCONS_00073055 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TLL27.713e-2938.97Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=... [more]
back to top