TCONS_00073038 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073038
Unique NameTCONS_00073038
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length917

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073038 ID=TCONS_00073038|Name=TCONS_00073038|organism=Clytia hemisphaerica|type=transcript|length=917bp
ataatcaatACCTAACAAAAGAGAATATTGCTGGGTTggaattgaaaaat
gttttaccGTAAAGACACATATAAATATAGAGGCTTGGCTCACAGAGGAG
AAGCACCACCTCAGgTTCTACCGGAGGAGAAAAGTTGGATGTTAGCTGCT
GCCCATGGCAACATCAAGAAGCTCGAAAGTCTCCTCAAAGAATACCCTTC
CCTGGCGAAGAAGAAGGATTTCGTTATGGGTTACACCGCCCTCCATTGGG
CCGCCAAACTAGGGCGTACCGATATTGTGAAATTCATTATGGGTGCAAAC
GTTGATATTCATTCGAAATCGCATGGTGGTTACACGCCCTTACATATTGC
TGCCATGAGTGGGCGGGACCAAGTTATAGTACAGTTGATTGAACTTTATA
ACGCAAACATTCACACACGTGACCATAGCGGTAAGAAACCACGGGATGTT
GTCAAGGATACCGTAGCTGCTGACGTTCAAAgaAAACTGGGACGATCACT
TATTCTCGAGCCGGATTGGATGCTAAAAGACGCCTCAGTAGTACGGAAAT
CATCCGCCCAGCTAACCCATATCACTCTACCGTCGCCAAAATCGGGTGAT
AGACGCCTTGGGCGGAACTTCCGCCCTTCTATTAGCACGTAACAAAGAAT
GTGTTTTCCGACCACTGGAAGAGGTGTATCAATCGCGTATCGAATGGAGA
TGGTTTTTTTGGGCGATCGACTTTGAGTTTAAAATGCAGACAACTGAATT
TGTTCCTTCGTGTGGGTTagacttttcaagtttttctggTTTTGAAAGAA
CCCAGAGTTGCTTATTCCTGAGACTCGTCAATACCGTAACTTAGTCTAAt
gtccgacacccttctttagagaaaggaatagtAGAAAGGTCGGAAACTAT
ATTTTTTACTAAGCGAC
Run BLAST on NCBI

transcript from alignment at scaffold_86:838387..857219-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073038 ID=TCONS_00073038|Name=TCONS_00073038|organism=Clytia hemisphaerica|type=transcript|length=18833bp|location=Sequence derived from alignment at scaffold_86:838387..857219- (Clytia hemisphaerica)
ATAATCAATACCTAACAAAAGAGAATATTGCTGGGTTGGAATTGAAAAAT
GTTTTACCGTAAAGACACATATAAATATAGAGGCTTGGCTCACAGAGGAG
AAGCACCACCTCAGGTAAAATGTAACATTTCATAGCAATTTCATAGACCT
CCTGAAAAACTATCTGAAAAGTTATTTCCTTTAAAATACTTTAAAAATAC
GCTAATTGCTCATAAGGTACAAGTGTTTGGGTAGGTTTGGGTTTGGGTGT
TTTTTAAATTTAGTTAAGGCTTTGGTTTTAGTCAAAATTTGAATGGAATT
GAGATTATGAATTTAAGCTATAACGAGGCTAGTGATAGAGTAAAGAATAA
TTGAGACCATGATTATATATCTCGTTTTGAAGAAAAAATTGAAAAAAGAA
ATATCTTTTTATTATAAGAATAATTAGCTCAATAAAAATCAAGTCCTGAT
ATAGTAAACAATAAATGAGATCTCGTTAAATTTGAAGAAAGAAATTTATC
TCTAATTCGAGGTCAATTAGCTTGATAAACATTAAAAGTCCTGTTATGTA
ACGAGATTAGCAAGTGAATTGATTATTTATCATTGTCATAATCAACAACA
TTATCCAGATCTGGATTCAATGCCCAGCTGAGCTTCCATCATAGCTTTTA
TCTACTAAACTTTCATTAAATTTGTTTTCATGAAAATTTGGGATGAGCTG
GAGTTTTTACAAGATACTTCACTAATTGGTCATTTAAAGCGATAGAGATG
ACGCGTTCTTTAGAAAAAGTAACAAAATAGTTTTATTACTGGTTAACGAC
CAACCAAATCAAATAAGAGCTTGTAAAAACTCCAGCTTGTCCCAAAAATT
TCAACTTGATAATAATGATGGTGTCGTTTATAACTTACTTCTTTAGTTCC
TTGCTTTGTTTGATGAATCTGGGCTTGCCTTACTAAGTTTTGTAAACTAC
AACCTGTTTAAGAATTGTAAATTTATGATTGACGAATGGCTTTATGACTT
CAAATTATCAGAAAACTTCATAAAGAAAAGTAATTATGCCACATTCTCCT
GCAATAAAAAATTGTTCAACAGTTCCTCCAACTAATTACAATTCTAAGAT
AACACTGTGTCTATGTGTCAACCTCTCACAATATAAAAACCAATACAAAT
GAATGATAACTTGATGACAAAATCTGTTATATCCTTCCTTAATCCCTCTC
TATATTATCAAAACAAATCCAATATTTTAAATAGACAGATTTTCTATACA
CTCTCTCCTTTAAAATGTGATAAGATAAATCAAAATAGAAATTTCAACCT
CATCAAAATGTATTTTTTGATTAACTTAAAGTTTTTGTTGCCAATCATTT
TTAATTAATTTTTTTAGCATCAAGTTCGAATATCAAAATGTCTCTCTTGG
TGTTCGAGTCATAGAGGTTTTATATCTTTGATAATATTTATGCTAATTCC
TCAAAAAGGGTCTTATATCCCTAGAGCCCTAAAATAGCTTAAAAATAATA
GATAAAATATTAATCAAATTCATCTGGAACACTGTCCTATACCTTCCTCT
GATCACAATACCATCATCATAGTCATTAATAAGAAAACAGGCATTCAAAT
TGATACCAAACCGTAGAAAAATGTTAGCCTGAGGAAACCGTTTTGAATCA
AATGTTTTCTGTTCCCAATTATGATCAAACAGGAAGTTCTCTATAAAATG
TTGTCAACGCAACAATGATATGTCAAGTAATTGATTCCTTTATTTCTTAA
TACGGTATATTAAAATGAACATCCTCAACTAGAATCTTTAATGAGCTTAT
TAACAAGAAAATAATTGTTTGATATAATACTGTAGAAAAAAAAGTCAGCT
TTGTACTGTATTACTTTATATATGTGTACACTTTGTTCAAAGAAAGTCTG
TCAACTTTTAAGTCGTTCTGTTTTTATGAACCTTCTTTGTGTGCTAGTGC
TAATTGCGAACTTAATGTGAACATTTAGATTAACTTATTTATATACTATA
TCTGGCTATATATCTCCGTTTCTAAGTGGTTATTTCTTATGTTTTTATGA
CTATTTTATGGATTTCAATCACTTGTTGTCTTGTTGTTTTGGACACACTG
GTCCTTCTACACTCATTCTAAACCTGCTGAATTTTGTACTAACATTCTAA
TTGGACGTCGTTTGAAGCGAACATCATTCTATCAACCAATATTATACAAA
AAAATTACTCTCTGTATCGTTTTAAAAAGTTATAAAAAGGAAAACAAAAT
TGATTCTTAAATGGATGAATGAATCAAAAAAAAGAACAGTTACAGTAGTA
CCAACTGAGATGCATGTTTCCTTGTGTTGACTTCTTCTAATATACTCACT
GCTGTAAACGGAAATCAAAAAAAACTGAAATCTATTTTAACTTTGTTGTA
CATCGATCTCTCATTTTGTCATCCGGTTTTCGATTCGATTTGACCAGTAT
GGAAACTTTAACTCAGCAATCACCCACACATCAAAATCATCACCATGAAA
CACAGCTCGTTGTAAGAAAAGTTTTTCTTATTTATTTTTCATTCGTTCGT
TAAGATAATCCTAACTAGTAGATGTCAAATTTTAACTGACTGTGTACTGT
GTTTTGGTTATGAGTTATCAATTAAGCTGATCACTAGAACATCCTTTAAG
AGAGTGATTAGTCTGTCGAATTTAAAAATTTTACTGGCTATGTAAAAATC
AAGGATCTTCTAGATTGGATAACCATCTTATTCGATTAAAAACGCTAGAT
ACACTTGAACAACTTTGTTTGCTATTTGCTGGAAATGTGGGTAAGTGTAC
TTTAATCTTAAAACCTAATTTCAGTGAAATTTAAATGTTTGGGTCTTCTA
GATTGGATAACTGTCATTTAACACTCTTTAATAAAACGTTAGATACACTA
AAACAATTTTAAAGTGGACTTATGGGCAAGTGTACTTAAATCTTAAAACC
TAATTTCGGTGAAATTTAAAATGTTTGTTAAAAAAGTCATTATAGTATTA
AATTACAAGATTGATATGCGATGCATATGATTGCCAATCTCTGGTTTGAT
AAAAAATTTTAAGTAATAATTCACTAAATAATTAAGCTGACTAGTCTCTC
AAGATTTATACTTTGAAAAATAATTGAAAAGTTACTTCCTTCTGTGTAGT
CAAATGTTATTTTGACAAAATATTATTTGTACCAACATTGGAAAGATTGA
TTTTGTATTTAACATTGACCTTTAATATCTAATGTGCCTAGAAGTTGATA
CTTCTTTCGATGTACTTTTCCATGTCTCTCCTATATGACTCTTTGTGGCT
GGATTTTTTTTGAAGGAAATGAGGACTGAGGTTGGTACTTTATTTAATGT
TTTGTTTTACATATACATATAAAAAGTGCTCTTTTATAAACTTGCTATTT
ACTTTTCATACGTTGTTACCTAACCTACTGAGTTCTTACTGGAAAAATTT
AGTTACACTTTCCTTCTATTATTACACTTTGTAGCGTGGCGTTGTTTTCC
AAAAGGTACTTTCCATACACAGTCAGAATCTGACTGTTTCTAGAAAAATA
ATTTACATAAAAATTCCAACTAAACCTTATTTATACACTTTAAATTACCA
AAGCACAGTTTCTCATTGTAACTTTTTGTTGAGATTTGAGATTTTTTTCT
ACTGTCCAAGAAGATATCTCGCCTCTTCTTGAATTTATGGTTTTCTATGC
TCTCTTTCTACTGTTCTGTTAGACCTATTTTTAACGAGCTATGAAATATT
TCTTGTAATCTTGTGTGAAATGAAACACGTTGCTCTAAAAGTTCATCATC
AAAGTTCTCATCTCCCCGAATACACACGTTTTTTATAAGGACATCCAAAA
TTTCTGAAGCCTTCAGATGTTCTTAATTTTTTGAGTTTTAAGTCTAAAAA
TGGTCTGAACATGTTCTTATTTTCGCCATTTTGTGAATAATTTCGTCCAT
TTTCCTAAGGAATCGGTTGTTTAGAGTCAAGAAAGCCTTGAAATGTTCTT
AACTTGTTCTTAATATTTTTGCCATCAGAGGCTCTTGTTCTCATATAGTT
TGTTCTTATAAAAAACGTGTAACAAAAGTTCAATTACTACTTTGGTGTAG
AAATAGTTTTATTTTCATAAGTCTAGCAAGTTTGAAATAAAGTGAGAATA
TTGTTCAAGTGGAAATATCGAATTTATTGTAGCTTAGCTTAGCTCTGATT
AAGTTTATACTATTTTTAAGCACTTTGAACTTTAGCTTTATTAAGCTACT
TAAAATTAGGGAACTAGTTATTGAAATAAATCAGAAACAGTATTTTTTTC
AGAGACATAGTAAATTTGTTGTCGTTTCTTTTGTTGGTGGTAATGTATTA
TAATAAAGTTTATATCTTTTAAAGAGGGCACTGATTGGTTTATTAGACGA
GCAACCATAGTTCGCCCCCCCCCCCCTTTNCTTTTGTTGGTGGTAATGTA
TTATAATAAAGCTTATATCTTTTAAAGAGGGTACTGATTGGTTTATTAGA
CGAGCAACCATAGTTCGTCCCCCCTTTCTTAATGACACTTCCTGAACAAA
TGGAGAAGGGGGGATCAGAAATTTTTATGAAAAAGGGAGATAGCAAGGAA
AGGGGGGGGGTCATTTAAGATAGGGGGCGGTCAGACCCCTTTCCGCACTA
TGAGAAACTGCCAAAACAAACAATAGTGCCTATGAAAACAGAATATTACT
ACCAAGAATCGAAAGATATCCCAATGGATACCCTGTTCTCATTTAGTATC
ATTTTCAGACATTATTGGACAAACAAAAATAAAAAAACTTACAGTAATAA
GAATATGAATGCTAGAGTAGAATTTCATACATATAAAATAGATAACATTA
GTCGTGTGTGCAAAGATGTGTTGTGAGCTAGAAAGATTTTTGATGACCTA
ACTTGATATTTGAGTAGATTCGTCTTTTCCTGACTAATTCGCGTGCGTCT
TTTATATACTTTATCGAATTTTTCTACATCTCCCGTACAGAGATATCGGT
TAATAAAAAAATTGTGTAAGAATTTTAATGGATTTTTATTCTCTTTGACT
TTACGCTCTATGTTGTTCCAATATGTTATCAAATTTTTCAATCTTATAGA
AAACGTAGCATGATTGAGTTGATGTTATGAGGTTATGATGACCAGAATTA
TAATATTTCGTCAGTTTGGATAATGTGAACGTTGTTTGAGAGCGAGCAGT
AATACAATTTTGTTGTAGAAGTTTCTTAACTGATGACCAAAATAATAGAA
TGATATTCACATCACAAAGTTGACTGCTTTTAATTCTGTTACTTTAATAG
GTTTCCTAAATTTCTTTTACTATCTTAAATATGCAAAACTTTTTGGTCAA
AATAATACAAAAGCTTCTGGTCTCAAGAAAATATACTTTACCATCTATTT
GAAGGAGCTCTAAGTCCCAACAAAAAAGTGTATTATAATCATTTTAACCT
CTATTAGTGATGTATCGCAGAGCTGCTGCTTCTAATTTTATTTCCCACGT
CCCAGTACTTCACCAAACATTATAACTTTTAAAAATTATGATAGTCAAAA
ATTTGGAAATTTTATTTTGTTCTTCGTGTTCTTTGTACTCATTTATTTTT
TTCCCTTCGTTATTTTTTCTCATCCAATATTGATTTCGGTATTTGCCAAT
CTTCATTATTCCCCCTTAATTTCTTCTTTATGTTATAATCTAAGACCTAC
CACTGGTAGTTCTTATCTTCCTATATTATTCGTAAACAAAGCAATAACCT
AACAATACTGTTATCTTTATCCCTCATACAATGCTAAGATTTAAAATTCT
TGAAAATTCAGGTATAGATAAAGGGTTAAAAATAGTTGTTGAAAAATCGA
CTAAGATATTATAGTAACTAGAAACAGAGATAGAAATGAAGATTTTTCTT
CACGTTCTGCAAAAAAAGAAATAGGCGAGGTAGGGGTTTCAAGTGATTAA
AGAAGAGTATTTTTTCGCTTATTGTTTTTCAACTTGAAATTTTTCCAAAA
GAAAATTTGATAGAAACAAGTAGAGTTTAGCAGTATGAAATATTGTTCAT
GTGAAATTTTTTACGTTTAACGTTGGAGAATTAAAAGTTTGAAATTAAAA
TTAAAATTTGAAAATCTCACTTGTTCAATTTGGAATAGTGGAGAGCAATA
AAAGGTGTGAATAAAAAGCTCAACCATCGGTGAACAGAATGTAGTTTTTA
CGAGTCAAAAATTTATGATAATAATTCGAATTGGAATAAATTAATGAATA
AAGATGACGACCACGAAACGGTACTTACGACGTTTCAGTAGCGTCGATCG
TGCGTCCGTTGATCGGGAACAGGTGAGTCCTAAAGGAAAAGATCTCTCTT
TCATCAACGGATTAGAATAGGTGGATTAAGAACTCATAGAAAACACTCCT
CGTTAGGTTATCAAACTTTTTTACGAGTTTGCTAGCAATTAAAACTTGAT
AAGTTGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGATCTCTCTTGGGAGCAACGAGAGAAGTTAATC
CACCTATTCTAATCCGTTGCTTTCATGAAAACTGTCTTAAAGAACAGATT
GAGAAAACCCATATTTGTGTATTCGTGTGTGTTGCTTAGCAGATCCTGTT
GGAGAATAATAGACATTTTGTACATTTCGATGCATTGCTCTTAAAGGGAA
AAAAATGATCCCTCAAATTTTAAATTAATGAATTTACTTAAGGGTTTAAA
ACCTTTCAAAAACTTGAAACTGAAGATGAAAAAAATGGGTTTAAACTAAA
ATTCATATATTTTTCTGTAATTTTAAACTTTGCCGCATTCAAACTTTTTA
CTACCTTTCCTATGGGACAAAATTTACAATCCTCTTGGAAGGTTTGCTCT
GGGGTTTTCCCGGGGAGGGGTAATTGTTCTTCCTCATGAGCACATTTTAA
TCTCACATCAAGTTTAAGTTTTATCTCTTTTCCTGTTAACAGATCGTAAA
ATTTTAAGTCACTTATAAAAGTCTCAATCTTAATTTTTTTTATCAATTTT
CAGGTTCTACCGGAGGAGAAAAGTTGGATGTTAGCTGCTGCCCATGGCAA
CATCAAGAAGCTCGAAAGTCTCCTCAAAGAATACCCTTCCCTGGCGAAGA
AGAAGGATTTCGTTATGGGTTACACCGCCCTCCATTGGGCCGCCAAACTA
GGGCGTACCGATATTGTGAAATTCATTATGGGTGCAAACGTTGATATTCA
TTCGAAATCGCATGGTGGTTACACGCCCTTACATATTGCTGCCATGAGTG
GGCGGGACCAAGTTATAGTACAGTTGATTGAACTTTATAGTAAGTGTTAT
TTTACTTTCACTATATGACGTTCGAAATCTGCCCGGGTAGTTTGATTCTT
GGCGTTCGATCGGACGTTTACCTTGTAGCATCAAAATAATCACCAATAAA
TTCCTTCGGTTTGACACTTCTTAGACTATTGTGACCTGTTTCAACAACTC
ATCTTTTTTCAAATTCTTTTTTACAGACGCAAACATTCACACACGTGACC
ATAGCGGTAAGAAACCACGGGATGTTGTCAAGGATACCGTAGCTGCTGAC
GTTCAAAGTAAGTCCGCCATTATGGTGTTCATTTCGAATGTCTCAACAAC
TTGAAGTAATTCTCTGGTCTTCAGAGGAATACCATAGACTTTTTTTTTTT
GCTTATTTATTTATTTTTCCTTTTCTTTTCTTTTCTTTTACATAGTCTAG
TACCTCTAGTACCTCTGGCGAAAAAAATCATAGACTATTTTATCGCTCTT
TTTATCGAACTCATTACAAGTCAACGATATCAGATTCCTTTTGATCTCCG
AGTTATGGATGTTCAATTTAATGAGAGTTCCATTCTTAGACAAATAAGGT
ATAAGTTAGGTAAGGAGTCCTTCAGTGGTCCCCATTGAGTTTCAAGCCGA
AGGCTAGAGGTCAATCTCCTTGGTAGGATTTGAAGCCAACAAATCCTACC
AAAGTTGCGCGGCCTTGAGCGACCCGCCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAGGTTTTTACACAAATGACAGATTGA
AACTAAAATTTACCGCTTAATTTCGAAAAATATATCACTCGAAAACAAAG
GANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAT
TCAATCCGTCATCAAAAATACGGCGCATATTTTAAGGCTTCAATTTTTCT
TGCCTGAGAAAGGTTAGAGATTGACCTCTAGCCCTTCGGGCTTGAAACAC
TCAATGGTGGTCCCACATGCGTTCCAGCTTTCGTTTAGTGTCTAGATGTA
TGTCGCCTTTTTGGCCCAGCGCTAAGCGAGTGGGCCTTTCATTTGCAACG
TTCTGTTCGTTCGTGTGTCCGTCCGTTTTGGTAGAAACGGCGCTTAAAAC
CAGTATCACACTTTTTGCCGTCTGGATAGGGAAAAGCTTGCTAAAGTCTG
ATACTGGCTATAAAAGATATATTTTCTGATTCCGCGCTCCTTCAAAACAA
TTTTCAAAACAAACCAAGATGGCGGTCGAAGCGAGGAGGTTGATTCATAC
TTTCTTGAACATTTTCTTTGCTTAGTGGTCAAGAGATTTTCAAACCAAAG
AAATTTTGTAAAGATTTTCTTTATAAACCTTTTTCAACATTCTTATAGTC
TTTGCTCAAGTTTTCATAAATTTTTATGAGTGAAATTCTACCTTAAATCA
CTTTCATTTTTTTAGTTTCTTGTATTCAAAAAGACTTTATTTTTAGGAAA
TAATGGCTTCTGATATAGAAATAAATAAACTGAAATGCAGCTCATGTGTA
AATTTGAATAAGATTTGAACTTTTTTCTTGATGCTACAGAAGAAAACAGT
CACTTCTGGATCTGTCGATGTTAACAACGGTCAGTACAACATACAGTGGT
TGGGACGTGGTATGATTTTCAAACTCAACACATAATTATTTCAAGTAAAC
TAATTCTGGAATTTGGTAATGGAAACTAAAATGGAGCTCATGTGTAAATT
GGAACAAGATTGGAACTTTTTCCGAGATGCTACGCGTGCGTGAAAATTAT
TTTTTCTGGATCTGTCTCGTTTGGCGAAAGGTGCGGTGGCTTGATTTTTC
AAACTCGACACAGAATTATTTCAAANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCATACATATGCTGCTTTGTACGCTCGATTTCAACAC
GTTACTTTTCGCTGGGCCTTCACGCCCAACGGGCTTCTTGTCCTATTTTG
ATAAAAGTGTCGGTTTATATTTTCTTATGAAATTTATGATAATTCTTCCT
TTTTTTCGTTTTTCAGGAAAACTGGGACGATCACTTATTCTCGGTATGCG
ATGATTTTTTCTTTTCCTTTCTTTGCTTTGTTTTTGATCGATTGATTGTT
AAGTGAGTTATACATTAAAATGCACATTGGGCTTTACCAGAAACGAAAGC
CGTATGTCAAACATCTTTAATGTAGGTCCGACCTTTTGTGAGCTACTTCC
TTGAATACAACTGAAAAAAAATGCTTAAAGACTTCCCAAAGTCACCCACG
GCACTCGGTGGGAGCAAAAGGTGTGCGTCCAAGGAGGTATACGATTTTAT
TCCTTTAAAGAAGCTCATGATTTGACAGGGAAAATCTATATCTTAAATAA
AGAAGCCTTCAGGAAGCCTTCTTTTATGCACAGAAAGGATGATCGAAGTA
AACTCCTGTGTCAGAAATTTCCATCTAATTTGTAAAGTCAGACTAATAGT
CATCTCCTCTAACCACCCTCATCGTTGTTTTGGTGTATGTCTTTGAATTT
ATTATTTGATAACGTGACTGAGTAGTTTTTAATGATTTGTATTGTAAAAA
ACTGAGCTTTAATGTTTGAATGGAAATTGAACGAATAAATAAATTAGTGA
ATGGATTAAGTAAAGGGTTTCGACCCAGCGTATTTCAATTCAAGCTTTAT
TTGGCTAGGAAGTAGTTTTTTTTTTCATTGCTTGTTACTAAATTGATATT
TTTACAATTTTTAGCTGTATTTCACTTATTTTATCTTATCTAGTTTTGTC
AATATTTTTAAGCATGACTTTGTAGCTAGAAGTTTTTACAACACGCACAC
ACATACACGCTTTTTGAATAATTACATCACATACATTTCATCACATCATA
ACATAACATTTTAATCAATTATGTCAAGATATCTACCAGAAAATCATTAC
ATTAAACCACAGCTATCCTCAAACCCAGCTCCAGTGTTAAAAAGTAAATT
AAAGACACTTTAAATTTTTTGCCAAATTGAAAGAACGACGAGCCTAAACC
ATGATTGACGATTTCTCTGTTTGCAGCGAAGACAAAAAAGGCTGTAACTT
TTATAATATAATTGGAATTAAATAGCGGTTTTATTCGAANCTTTGTACGC
TCGATTTCAACACGTTACTTTTCGCTGGGCCTTCACGCCCAACGGGCTTC
TTGTCCTATTTTGATAAAAGTGTCGGTTTATATTTTCTTATGAAATTTAT
GATAATTCTTCCTTTTTTTCGTTTTTCAGGAAAACTGGGACGATCACTTA
TTCTCGGTATGCGATGATTTTTTCTTTTCCTTTCTTTGCTTTGTTTTTGA
TCGATTGATTGTTAAGTGAGTTATACATTAAAATGCACATTGGGCTTTAC
CAGAAACGAAAGCCGTATGTCAAACATCTTTAATGTAGGTCCGACCTTTT
GTGAGCTACTTCCTTGAATACAACTGAAAAAAAATGCTTAAAGACTTCCC
AAAGTCACCCACGGCACTTGGTGGGAGCAAAAGGTGTGCGTCCAAGGAGG
TATACGATTTTATTCCTTTAAAGAAGCTCATGGTTTGACAGGGAAAATCT
ATATCTTAAATAAAGAAGCCTTCAGGAAGCCTTCTTTTATGCACAGAAAG
GATGCTCGAAGTAAACTCCTGTGTCAGAAATTTCCATCTAATTTGTAAAG
TCAGACTAATAGTCATCTCCTCTAACCACCCTCATCGTTGTTTTGGTGTA
TGTCTTTGAATTTATTATTTGATCACGTGACTGAGTAGTTTTTAATGATT
TGTATTGTAAAAAACTGAGCTTTAATGTTTGAATGGAAATTGAACGAATA
AATAAATTAGTGAATGGATTAAGTAAAGGGTTTCGACCCAGCGTATTTCA
ATTCAAGCTTTATTTGGCTAGGAAGTAGTTTTTTTTTTCATTGCTTGTTA
CTAAATTGATATTTTTACAATTTTTAGCTGTATTTCACTTATTTTATCTT
ATCTAGTTTTGTCAATATTTTTAAGCATGACTTTGTAGCTAGAAGTTTTT
ACAACACGCACACACATACACGCTTTTTGAATAATTACATCACATACATT
TCATCACATCATAACATAACATTTTAATCAATTATGTCAAGATATCTACC
AGAAAATCATTACATTAAACCACAGCTATCCTCAAACCCAGCTCCAGTGT
TAAAAAGTAAATTAAAGACACTTTAAATTTTTTGCCAAATTGAAAGAACG
ACGAGCCTATACCATGATTGACGATTTCTCTGTTTGCAGCGAAGACAAAA
AAGGCTGTAACTTTTATAATATAATTGGAATTAAATAGCGGTTTTATTCG
AATTCTATCAAAAGTTAATACACTCTTCTCGAGATGCATAAATTTATTGT
TGTCCTCGTTTTCAAACAGATTTCATTGCTATGAAATTATACATTTAAAC
CAATTTAAATTCACAAAAGGCAAACATTAACTCTAAAACAAAAGTACTGG
AAATTCAAAATGTCTCATGAGGTGTAAACAGCACAATTATCATTGAGAAT
ATGTAATTTTATAGCAATGAAATCTGTTTGAAAACGAGAACAACAATAAA
TTTATGCATCTCGAGAAGAGTGTATTGAAGCCTCTTTTGACTACCCTAAA
AATTCTATTGAGACAGACGTTTTCTTTTGGATATCTTGTCAATTAATGTT
TACACACACACACACATACCATTACATCTTAACACATTGGGCTTTTCCAG
AAAAAAAACGTGCACCCCCTGTTGAGGAGGTCCAACCTTTTGTGACCTAC
CCCCATGGAATTCCGCTTATTTTTGACGGATTTTCGTGTACCCTTATGGA
ATTCCACTGCATTTCAAACCTTACGCCCTTGGAACGAAAATGGACCTCCT
CAACAGGGGGTGCACGGTTTCTTTCTGGAAAAACCCATTCATAACTCACA
ATAACCATCACTAATTCACTAATCATTAATTAAAGAAACACACGGAGTTT
ACTGCACTGACATTTTTTCTATGCATGATAGAAACCCCCCCCCCCCCCCC
CGACACCCTTTTATGCCCCTTTTACAACGCACGATAGCCCCTCATCCCCT
TGAACAGAAGCCTTCTAATATACAGTGGATTGAAATATTTGTCTTAAAAT
CTGACTGGTTCAAAACCATTTCGCGACTCTCAGAGTTTCATAGATCGCGC
ACTTTACATGTATCATATGCTTAAAGGGGGATTTCCATTTTATTTATCTC
ATGGCTTCAAGAACTCACTTCCAGTAATGGGCGTGATAAGCTTTTGCCTT
ACCAGAAGATTCTAACATCTAACATTCTTTTTAAAGAGGAAATGGTTTTA
TCCTCTTTAAAGTAAAATAAACCAGCCGAGGCTGGAAGGTCAGCCAATAG
AGATTAGCTAGATAGCTTTAATAAGTGGGTTAACAGATGTAAGAGATGCA
CTGAAACAGAGTAGACTAAATATGTTGAATAATGTACAAAATGTGAAACA
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TGATTGGCTGTAAGTGACGTAAAATCAGTCAATACGTCACTTTCAACCAA
TCAGCTGTTGGGTCCGTGGAAGACATTGCAATGTTGCATATGGTGAATTC
ATGAATTCGACGAAAGTTTTCTAAATTTTGATTGATCCACTGTATATTGA
AAATTAGTGTTCCTTTCAAATCACGTTGTCCTCTCTTATATACATGTAAT
ATTTCCCTACAAACTTGTACACAGAGCCGGATTGGATGCTAAAAGACGCC
TCAGTAGTACGGAAATCATCCGCCCAGCTAACCCATATCACTCTACCGTC
GCCAAAATCGGGTGATAGACGCCTTGGGCGGAACTTCCGCCCTTCTATTA
GCACGTAACAAAGAATGTGTTTTCCGACCACTGGAAGAGGTGTATCAATC
GCGTATCGAATGGAGATGGTTTTTTTGGGCGATCGACTTTGAGTTTAAAA
TGCAGACAACTGAATTTGTTCCTTCGTGTGGGTTAGACTTTTCAAGTTTT
TCTGGTTTTGAAAGAACCCAGAGTTGCTTATTCCTGAGACTCGTCAATAC
CGTAACTTAGTCTAATGTCCGACACCCTTCTTTAGAGAAAGGAATAGTAG
AAAGGTCGGAAACTATATTTTTTACTAAGCGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045286XLOC_045286Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073038-exon-scaffold_86-1575043694:857106..857219TCONS_00073038-exon-scaffold_86-1575043694:857106..857219Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1575043694:849331..849616TCONS_00073038-exon-scaffold_86-1575043694:849331..849616Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1575043694:849063..849143TCONS_00073038-exon-scaffold_86-1575043694:849063..849143Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1575043694:845927..845953TCONS_00073038-exon-scaffold_86-1575043694:845927..845953Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1575043694:838387..838795TCONS_00073038-exon-scaffold_86-1575043694:838387..838795Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1510915933:857106..857219TCONS_00073038-exon-scaffold_86-1510915933:857106..857219Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1510915933:849331..849616TCONS_00073038-exon-scaffold_86-1510915933:849331..849616Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1510915933:849063..849143TCONS_00073038-exon-scaffold_86-1510915933:849063..849143Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1510915933:845927..845953TCONS_00073038-exon-scaffold_86-1510915933:845927..845953Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1510915933:838387..838795TCONS_00073038-exon-scaffold_86-1510915933:838387..838795Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1491911889:857106..857219TCONS_00073038-exon-scaffold_86-1491911889:857106..857219Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1491911889:849331..849616TCONS_00073038-exon-scaffold_86-1491911889:849331..849616Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1491911889:849063..849143TCONS_00073038-exon-scaffold_86-1491911889:849063..849143Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1491911889:845927..845953TCONS_00073038-exon-scaffold_86-1491911889:845927..845953Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1491911889:838387..838795TCONS_00073038-exon-scaffold_86-1491911889:838387..838795Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:838387..857219 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	1.80889e-07	0	4.55023e-08	0.00155397	0	0	0.0172315	0.00105198	2.15357	5.13485e-06	6.1646	6.6807	15.35	11.5606	2.65637	2.41122	4.20923e-07	0.853039	0.0071653	0	0	0	0	0	0	3.28792e-06	6.73549	5.28567
Blast
[Close]
BLAST of TCONS_00073038 vs. Swiss-Prot (Human)
Match: SWAHC (Ankyrin repeat domain-containing protein SOWAHC OS=Homo sapiens GN=SOWAHC PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.056e-23
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 1 
Query:  121 PEEKSWMLAAAHGNIKKLESLLKEYPSLAKKKDFVMGYTALHWAAKLGRTDIVKFIMG-AN-----VDIHSKSHGGYTPLHIAAMSGRDQVIVQLIELYNANIHTRDHSGKKPRDVVKDTVAADVQRKLG 492
            P E +WML+A+ G    LE LL   P L  K+DF+ G+T LHWAAK GR +++  ++  AN     V+I +++ GGYT LH+AAM G  +V+  L+  Y+A++  RD+SGKK    +  ++A +++  +G
Sbjct:  266 PLEHAWMLSASDGKWDSLEGLLTCEPGLLVKRDFITGFTCLHWAAKHGRQELLAMLVNFANKHQLPVNIDARTSGGYTALHLAAMHGHVEVVKLLVGAYDADVDIRDYSGKKASQYLSRSIAEEIKNLVG 395
The following BLAST results are available for this feature:
BLAST of TCONS_00073038 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWAHC1.056e-2340.00Ankyrin repeat domain-containing protein SOWAHC OS... [more]
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