TCONS_00073038 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073038
Unique NameTCONS_00073038
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length917

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073038 ID=TCONS_00073038|Name=TCONS_00073038|organism=Clytia hemisphaerica|type=transcript|length=917bp
ataatcaatACCTAACAAAAGAGAATATTGCTGGGTTggaattgaaaaat
gttttaccGTAAAGACACATATAAATATAGAGGCTTGGCTCACAGAGGAG
AAGCACCACCTCAGgTTCTACCGGAGGAGAAAAGTTGGATGTTAGCTGCT
GCCCATGGCAACATCAAGAAGCTCGAAAGTCTCCTCAAAGAATACCCTTC
CCTGGCGAAGAAGAAGGATTTCGTTATGGGTTACACCGCCCTCCATTGGG
CCGCCAAACTAGGGCGTACCGATATTGTGAAATTCATTATGGGTGCAAAC
GTTGATATTCATTCGAAATCGCATGGTGGTTACACGCCCTTACATATTGC
TGCCATGAGTGGGCGGGACCAAGTTATAGTACAGTTGATTGAACTTTATA
ACGCAAACATTCACACACGTGACCATAGCGGTAAGAAACCACGGGATGTT
GTCAAGGATACCGTAGCTGCTGACGTTCAAAgaAAACTGGGACGATCACT
TATTCTCGAGCCGGATTGGATGCTAAAAGACGCCTCAGTAGTACGGAAAT
CATCCGCCCAGCTAACCCATATCACTCTACCGTCGCCAAAATCGGGTGAT
AGACGCCTTGGGCGGAACTTCCGCCCTTCTATTAGCACGTAACAAAGAAT
GTGTTTTCCGACCACTGGAAGAGGTGTATCAATCGCGTATCGAATGGAGA
TGGTTTTTTTGGGCGATCGACTTTGAGTTTAAAATGCAGACAACTGAATT
TGTTCCTTCGTGTGGGTTagacttttcaagtttttctggTTTTGAAAGAA
CCCAGAGTTGCTTATTCCTGAGACTCGTCAATACCGTAACTTAGTCTAAt
gtccgacacccttctttagagaaaggaatagtAGAAAGGTCGGAAACTAT
ATTTTTTACTAAGCGAC
Run BLAST on NCBI

transcript from alignment at scaffold_86:838387..857219-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073038 ID=TCONS_00073038|Name=TCONS_00073038|organism=Clytia hemisphaerica|type=transcript|length=18833bp|location=Sequence derived from alignment at scaffold_86:838387..857219- (Clytia hemisphaerica)
ATAATCAATACCTAACAAAAGAGAATATTGCTGGGTTGGAATTGAAAAAT GTTTTACCGTAAAGACACATATAAATATAGAGGCTTGGCTCACAGAGGAG AAGCACCACCTCAGGTAAAATGTAACATTTCATAGCAATTTCATAGACCT CCTGAAAAACTATCTGAAAAGTTATTTCCTTTAAAATACTTTAAAAATAC GCTAATTGCTCATAAGGTACAAGTGTTTGGGTAGGTTTGGGTTTGGGTGT TTTTTAAATTTAGTTAAGGCTTTGGTTTTAGTCAAAATTTGAATGGAATT GAGATTATGAATTTAAGCTATAACGAGGCTAGTGATAGAGTAAAGAATAA TTGAGACCATGATTATATATCTCGTTTTGAAGAAAAAATTGAAAAAAGAA ATATCTTTTTATTATAAGAATAATTAGCTCAATAAAAATCAAGTCCTGAT ATAGTAAACAATAAATGAGATCTCGTTAAATTTGAAGAAAGAAATTTATC TCTAATTCGAGGTCAATTAGCTTGATAAACATTAAAAGTCCTGTTATGTA ACGAGATTAGCAAGTGAATTGATTATTTATCATTGTCATAATCAACAACA TTATCCAGATCTGGATTCAATGCCCAGCTGAGCTTCCATCATAGCTTTTA TCTACTAAACTTTCATTAAATTTGTTTTCATGAAAATTTGGGATGAGCTG GAGTTTTTACAAGATACTTCACTAATTGGTCATTTAAAGCGATAGAGATG ACGCGTTCTTTAGAAAAAGTAACAAAATAGTTTTATTACTGGTTAACGAC CAACCAAATCAAATAAGAGCTTGTAAAAACTCCAGCTTGTCCCAAAAATT TCAACTTGATAATAATGATGGTGTCGTTTATAACTTACTTCTTTAGTTCC TTGCTTTGTTTGATGAATCTGGGCTTGCCTTACTAAGTTTTGTAAACTAC AACCTGTTTAAGAATTGTAAATTTATGATTGACGAATGGCTTTATGACTT CAAATTATCAGAAAACTTCATAAAGAAAAGTAATTATGCCACATTCTCCT GCAATAAAAAATTGTTCAACAGTTCCTCCAACTAATTACAATTCTAAGAT AACACTGTGTCTATGTGTCAACCTCTCACAATATAAAAACCAATACAAAT GAATGATAACTTGATGACAAAATCTGTTATATCCTTCCTTAATCCCTCTC TATATTATCAAAACAAATCCAATATTTTAAATAGACAGATTTTCTATACA CTCTCTCCTTTAAAATGTGATAAGATAAATCAAAATAGAAATTTCAACCT CATCAAAATGTATTTTTTGATTAACTTAAAGTTTTTGTTGCCAATCATTT TTAATTAATTTTTTTAGCATCAAGTTCGAATATCAAAATGTCTCTCTTGG TGTTCGAGTCATAGAGGTTTTATATCTTTGATAATATTTATGCTAATTCC TCAAAAAGGGTCTTATATCCCTAGAGCCCTAAAATAGCTTAAAAATAATA GATAAAATATTAATCAAATTCATCTGGAACACTGTCCTATACCTTCCTCT GATCACAATACCATCATCATAGTCATTAATAAGAAAACAGGCATTCAAAT TGATACCAAACCGTAGAAAAATGTTAGCCTGAGGAAACCGTTTTGAATCA AATGTTTTCTGTTCCCAATTATGATCAAACAGGAAGTTCTCTATAAAATG TTGTCAACGCAACAATGATATGTCAAGTAATTGATTCCTTTATTTCTTAA TACGGTATATTAAAATGAACATCCTCAACTAGAATCTTTAATGAGCTTAT TAACAAGAAAATAATTGTTTGATATAATACTGTAGAAAAAAAAGTCAGCT TTGTACTGTATTACTTTATATATGTGTACACTTTGTTCAAAGAAAGTCTG TCAACTTTTAAGTCGTTCTGTTTTTATGAACCTTCTTTGTGTGCTAGTGC TAATTGCGAACTTAATGTGAACATTTAGATTAACTTATTTATATACTATA TCTGGCTATATATCTCCGTTTCTAAGTGGTTATTTCTTATGTTTTTATGA CTATTTTATGGATTTCAATCACTTGTTGTCTTGTTGTTTTGGACACACTG GTCCTTCTACACTCATTCTAAACCTGCTGAATTTTGTACTAACATTCTAA TTGGACGTCGTTTGAAGCGAACATCATTCTATCAACCAATATTATACAAA AAAATTACTCTCTGTATCGTTTTAAAAAGTTATAAAAAGGAAAACAAAAT TGATTCTTAAATGGATGAATGAATCAAAAAAAAGAACAGTTACAGTAGTA CCAACTGAGATGCATGTTTCCTTGTGTTGACTTCTTCTAATATACTCACT GCTGTAAACGGAAATCAAAAAAAACTGAAATCTATTTTAACTTTGTTGTA CATCGATCTCTCATTTTGTCATCCGGTTTTCGATTCGATTTGACCAGTAT GGAAACTTTAACTCAGCAATCACCCACACATCAAAATCATCACCATGAAA CACAGCTCGTTGTAAGAAAAGTTTTTCTTATTTATTTTTCATTCGTTCGT TAAGATAATCCTAACTAGTAGATGTCAAATTTTAACTGACTGTGTACTGT GTTTTGGTTATGAGTTATCAATTAAGCTGATCACTAGAACATCCTTTAAG AGAGTGATTAGTCTGTCGAATTTAAAAATTTTACTGGCTATGTAAAAATC AAGGATCTTCTAGATTGGATAACCATCTTATTCGATTAAAAACGCTAGAT ACACTTGAACAACTTTGTTTGCTATTTGCTGGAAATGTGGGTAAGTGTAC TTTAATCTTAAAACCTAATTTCAGTGAAATTTAAATGTTTGGGTCTTCTA GATTGGATAACTGTCATTTAACACTCTTTAATAAAACGTTAGATACACTA AAACAATTTTAAAGTGGACTTATGGGCAAGTGTACTTAAATCTTAAAACC TAATTTCGGTGAAATTTAAAATGTTTGTTAAAAAAGTCATTATAGTATTA AATTACAAGATTGATATGCGATGCATATGATTGCCAATCTCTGGTTTGAT AAAAAATTTTAAGTAATAATTCACTAAATAATTAAGCTGACTAGTCTCTC AAGATTTATACTTTGAAAAATAATTGAAAAGTTACTTCCTTCTGTGTAGT CAAATGTTATTTTGACAAAATATTATTTGTACCAACATTGGAAAGATTGA TTTTGTATTTAACATTGACCTTTAATATCTAATGTGCCTAGAAGTTGATA CTTCTTTCGATGTACTTTTCCATGTCTCTCCTATATGACTCTTTGTGGCT GGATTTTTTTTGAAGGAAATGAGGACTGAGGTTGGTACTTTATTTAATGT TTTGTTTTACATATACATATAAAAAGTGCTCTTTTATAAACTTGCTATTT ACTTTTCATACGTTGTTACCTAACCTACTGAGTTCTTACTGGAAAAATTT AGTTACACTTTCCTTCTATTATTACACTTTGTAGCGTGGCGTTGTTTTCC AAAAGGTACTTTCCATACACAGTCAGAATCTGACTGTTTCTAGAAAAATA ATTTACATAAAAATTCCAACTAAACCTTATTTATACACTTTAAATTACCA AAGCACAGTTTCTCATTGTAACTTTTTGTTGAGATTTGAGATTTTTTTCT ACTGTCCAAGAAGATATCTCGCCTCTTCTTGAATTTATGGTTTTCTATGC TCTCTTTCTACTGTTCTGTTAGACCTATTTTTAACGAGCTATGAAATATT TCTTGTAATCTTGTGTGAAATGAAACACGTTGCTCTAAAAGTTCATCATC AAAGTTCTCATCTCCCCGAATACACACGTTTTTTATAAGGACATCCAAAA TTTCTGAAGCCTTCAGATGTTCTTAATTTTTTGAGTTTTAAGTCTAAAAA TGGTCTGAACATGTTCTTATTTTCGCCATTTTGTGAATAATTTCGTCCAT TTTCCTAAGGAATCGGTTGTTTAGAGTCAAGAAAGCCTTGAAATGTTCTT AACTTGTTCTTAATATTTTTGCCATCAGAGGCTCTTGTTCTCATATAGTT TGTTCTTATAAAAAACGTGTAACAAAAGTTCAATTACTACTTTGGTGTAG AAATAGTTTTATTTTCATAAGTCTAGCAAGTTTGAAATAAAGTGAGAATA TTGTTCAAGTGGAAATATCGAATTTATTGTAGCTTAGCTTAGCTCTGATT AAGTTTATACTATTTTTAAGCACTTTGAACTTTAGCTTTATTAAGCTACT TAAAATTAGGGAACTAGTTATTGAAATAAATCAGAAACAGTATTTTTTTC AGAGACATAGTAAATTTGTTGTCGTTTCTTTTGTTGGTGGTAATGTATTA TAATAAAGTTTATATCTTTTAAAGAGGGCACTGATTGGTTTATTAGACGA GCAACCATAGTTCGCCCCCCCCCCCCTTTNCTTTTGTTGGTGGTAATGTA TTATAATAAAGCTTATATCTTTTAAAGAGGGTACTGATTGGTTTATTAGA CGAGCAACCATAGTTCGTCCCCCCTTTCTTAATGACACTTCCTGAACAAA TGGAGAAGGGGGGATCAGAAATTTTTATGAAAAAGGGAGATAGCAAGGAA AGGGGGGGGGTCATTTAAGATAGGGGGCGGTCAGACCCCTTTCCGCACTA TGAGAAACTGCCAAAACAAACAATAGTGCCTATGAAAACAGAATATTACT ACCAAGAATCGAAAGATATCCCAATGGATACCCTGTTCTCATTTAGTATC ATTTTCAGACATTATTGGACAAACAAAAATAAAAAAACTTACAGTAATAA GAATATGAATGCTAGAGTAGAATTTCATACATATAAAATAGATAACATTA GTCGTGTGTGCAAAGATGTGTTGTGAGCTAGAAAGATTTTTGATGACCTA ACTTGATATTTGAGTAGATTCGTCTTTTCCTGACTAATTCGCGTGCGTCT TTTATATACTTTATCGAATTTTTCTACATCTCCCGTACAGAGATATCGGT TAATAAAAAAATTGTGTAAGAATTTTAATGGATTTTTATTCTCTTTGACT TTACGCTCTATGTTGTTCCAATATGTTATCAAATTTTTCAATCTTATAGA AAACGTAGCATGATTGAGTTGATGTTATGAGGTTATGATGACCAGAATTA TAATATTTCGTCAGTTTGGATAATGTGAACGTTGTTTGAGAGCGAGCAGT AATACAATTTTGTTGTAGAAGTTTCTTAACTGATGACCAAAATAATAGAA TGATATTCACATCACAAAGTTGACTGCTTTTAATTCTGTTACTTTAATAG GTTTCCTAAATTTCTTTTACTATCTTAAATATGCAAAACTTTTTGGTCAA AATAATACAAAAGCTTCTGGTCTCAAGAAAATATACTTTACCATCTATTT GAAGGAGCTCTAAGTCCCAACAAAAAAGTGTATTATAATCATTTTAACCT CTATTAGTGATGTATCGCAGAGCTGCTGCTTCTAATTTTATTTCCCACGT CCCAGTACTTCACCAAACATTATAACTTTTAAAAATTATGATAGTCAAAA ATTTGGAAATTTTATTTTGTTCTTCGTGTTCTTTGTACTCATTTATTTTT TTCCCTTCGTTATTTTTTCTCATCCAATATTGATTTCGGTATTTGCCAAT CTTCATTATTCCCCCTTAATTTCTTCTTTATGTTATAATCTAAGACCTAC CACTGGTAGTTCTTATCTTCCTATATTATTCGTAAACAAAGCAATAACCT AACAATACTGTTATCTTTATCCCTCATACAATGCTAAGATTTAAAATTCT TGAAAATTCAGGTATAGATAAAGGGTTAAAAATAGTTGTTGAAAAATCGA CTAAGATATTATAGTAACTAGAAACAGAGATAGAAATGAAGATTTTTCTT CACGTTCTGCAAAAAAAGAAATAGGCGAGGTAGGGGTTTCAAGTGATTAA AGAAGAGTATTTTTTCGCTTATTGTTTTTCAACTTGAAATTTTTCCAAAA GAAAATTTGATAGAAACAAGTAGAGTTTAGCAGTATGAAATATTGTTCAT GTGAAATTTTTTACGTTTAACGTTGGAGAATTAAAAGTTTGAAATTAAAA TTAAAATTTGAAAATCTCACTTGTTCAATTTGGAATAGTGGAGAGCAATA AAAGGTGTGAATAAAAAGCTCAACCATCGGTGAACAGAATGTAGTTTTTA CGAGTCAAAAATTTATGATAATAATTCGAATTGGAATAAATTAATGAATA AAGATGACGACCACGAAACGGTACTTACGACGTTTCAGTAGCGTCGATCG TGCGTCCGTTGATCGGGAACAGGTGAGTCCTAAAGGAAAAGATCTCTCTT TCATCAACGGATTAGAATAGGTGGATTAAGAACTCATAGAAAACACTCCT CGTTAGGTTATCAAACTTTTTTACGAGTTTGCTAGCAATTAAAACTTGAT AAGTTGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNGATCTCTCTTGGGAGCAACGAGAGAAGTTAATC CACCTATTCTAATCCGTTGCTTTCATGAAAACTGTCTTAAAGAACAGATT GAGAAAACCCATATTTGTGTATTCGTGTGTGTTGCTTAGCAGATCCTGTT GGAGAATAATAGACATTTTGTACATTTCGATGCATTGCTCTTAAAGGGAA AAAAATGATCCCTCAAATTTTAAATTAATGAATTTACTTAAGGGTTTAAA ACCTTTCAAAAACTTGAAACTGAAGATGAAAAAAATGGGTTTAAACTAAA ATTCATATATTTTTCTGTAATTTTAAACTTTGCCGCATTCAAACTTTTTA CTACCTTTCCTATGGGACAAAATTTACAATCCTCTTGGAAGGTTTGCTCT GGGGTTTTCCCGGGGAGGGGTAATTGTTCTTCCTCATGAGCACATTTTAA TCTCACATCAAGTTTAAGTTTTATCTCTTTTCCTGTTAACAGATCGTAAA ATTTTAAGTCACTTATAAAAGTCTCAATCTTAATTTTTTTTATCAATTTT CAGGTTCTACCGGAGGAGAAAAGTTGGATGTTAGCTGCTGCCCATGGCAA CATCAAGAAGCTCGAAAGTCTCCTCAAAGAATACCCTTCCCTGGCGAAGA AGAAGGATTTCGTTATGGGTTACACCGCCCTCCATTGGGCCGCCAAACTA GGGCGTACCGATATTGTGAAATTCATTATGGGTGCAAACGTTGATATTCA TTCGAAATCGCATGGTGGTTACACGCCCTTACATATTGCTGCCATGAGTG GGCGGGACCAAGTTATAGTACAGTTGATTGAACTTTATAGTAAGTGTTAT TTTACTTTCACTATATGACGTTCGAAATCTGCCCGGGTAGTTTGATTCTT GGCGTTCGATCGGACGTTTACCTTGTAGCATCAAAATAATCACCAATAAA TTCCTTCGGTTTGACACTTCTTAGACTATTGTGACCTGTTTCAACAACTC ATCTTTTTTCAAATTCTTTTTTACAGACGCAAACATTCACACACGTGACC ATAGCGGTAAGAAACCACGGGATGTTGTCAAGGATACCGTAGCTGCTGAC GTTCAAAGTAAGTCCGCCATTATGGTGTTCATTTCGAATGTCTCAACAAC TTGAAGTAATTCTCTGGTCTTCAGAGGAATACCATAGACTTTTTTTTTTT GCTTATTTATTTATTTTTCCTTTTCTTTTCTTTTCTTTTACATAGTCTAG TACCTCTAGTACCTCTGGCGAAAAAAATCATAGACTATTTTATCGCTCTT TTTATCGAACTCATTACAAGTCAACGATATCAGATTCCTTTTGATCTCCG AGTTATGGATGTTCAATTTAATGAGAGTTCCATTCTTAGACAAATAAGGT ATAAGTTAGGTAAGGAGTCCTTCAGTGGTCCCCATTGAGTTTCAAGCCGA AGGCTAGAGGTCAATCTCCTTGGTAGGATTTGAAGCCAACAAATCCTACC AAAGTTGCGCGGCCTTGAGCGACCCGCCNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNAGGTTTTTACACAAATGACAGATTGA AACTAAAATTTACCGCTTAATTTCGAAAAATATATCACTCGAAAACAAAG GANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAT TCAATCCGTCATCAAAAATACGGCGCATATTTTAAGGCTTCAATTTTTCT TGCCTGAGAAAGGTTAGAGATTGACCTCTAGCCCTTCGGGCTTGAAACAC TCAATGGTGGTCCCACATGCGTTCCAGCTTTCGTTTAGTGTCTAGATGTA TGTCGCCTTTTTGGCCCAGCGCTAAGCGAGTGGGCCTTTCATTTGCAACG TTCTGTTCGTTCGTGTGTCCGTCCGTTTTGGTAGAAACGGCGCTTAAAAC CAGTATCACACTTTTTGCCGTCTGGATAGGGAAAAGCTTGCTAAAGTCTG ATACTGGCTATAAAAGATATATTTTCTGATTCCGCGCTCCTTCAAAACAA TTTTCAAAACAAACCAAGATGGCGGTCGAAGCGAGGAGGTTGATTCATAC TTTCTTGAACATTTTCTTTGCTTAGTGGTCAAGAGATTTTCAAACCAAAG AAATTTTGTAAAGATTTTCTTTATAAACCTTTTTCAACATTCTTATAGTC TTTGCTCAAGTTTTCATAAATTTTTATGAGTGAAATTCTACCTTAAATCA CTTTCATTTTTTTAGTTTCTTGTATTCAAAAAGACTTTATTTTTAGGAAA TAATGGCTTCTGATATAGAAATAAATAAACTGAAATGCAGCTCATGTGTA AATTTGAATAAGATTTGAACTTTTTTCTTGATGCTACAGAAGAAAACAGT CACTTCTGGATCTGTCGATGTTAACAACGGTCAGTACAACATACAGTGGT TGGGACGTGGTATGATTTTCAAACTCAACACATAATTATTTCAAGTAAAC TAATTCTGGAATTTGGTAATGGAAACTAAAATGGAGCTCATGTGTAAATT GGAACAAGATTGGAACTTTTTCCGAGATGCTACGCGTGCGTGAAAATTAT TTTTTCTGGATCTGTCTCGTTTGGCGAAAGGTGCGGTGGCTTGATTTTTC AAACTCGACACAGAATTATTTCAAANNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNCATACATATGCTGCTTTGTACGCTCGATTTCAACAC GTTACTTTTCGCTGGGCCTTCACGCCCAACGGGCTTCTTGTCCTATTTTG ATAAAAGTGTCGGTTTATATTTTCTTATGAAATTTATGATAATTCTTCCT TTTTTTCGTTTTTCAGGAAAACTGGGACGATCACTTATTCTCGGTATGCG ATGATTTTTTCTTTTCCTTTCTTTGCTTTGTTTTTGATCGATTGATTGTT AAGTGAGTTATACATTAAAATGCACATTGGGCTTTACCAGAAACGAAAGC CGTATGTCAAACATCTTTAATGTAGGTCCGACCTTTTGTGAGCTACTTCC TTGAATACAACTGAAAAAAAATGCTTAAAGACTTCCCAAAGTCACCCACG GCACTCGGTGGGAGCAAAAGGTGTGCGTCCAAGGAGGTATACGATTTTAT TCCTTTAAAGAAGCTCATGATTTGACAGGGAAAATCTATATCTTAAATAA AGAAGCCTTCAGGAAGCCTTCTTTTATGCACAGAAAGGATGATCGAAGTA AACTCCTGTGTCAGAAATTTCCATCTAATTTGTAAAGTCAGACTAATAGT CATCTCCTCTAACCACCCTCATCGTTGTTTTGGTGTATGTCTTTGAATTT ATTATTTGATAACGTGACTGAGTAGTTTTTAATGATTTGTATTGTAAAAA ACTGAGCTTTAATGTTTGAATGGAAATTGAACGAATAAATAAATTAGTGA ATGGATTAAGTAAAGGGTTTCGACCCAGCGTATTTCAATTCAAGCTTTAT TTGGCTAGGAAGTAGTTTTTTTTTTCATTGCTTGTTACTAAATTGATATT TTTACAATTTTTAGCTGTATTTCACTTATTTTATCTTATCTAGTTTTGTC AATATTTTTAAGCATGACTTTGTAGCTAGAAGTTTTTACAACACGCACAC ACATACACGCTTTTTGAATAATTACATCACATACATTTCATCACATCATA ACATAACATTTTAATCAATTATGTCAAGATATCTACCAGAAAATCATTAC ATTAAACCACAGCTATCCTCAAACCCAGCTCCAGTGTTAAAAAGTAAATT AAAGACACTTTAAATTTTTTGCCAAATTGAAAGAACGACGAGCCTAAACC ATGATTGACGATTTCTCTGTTTGCAGCGAAGACAAAAAAGGCTGTAACTT TTATAATATAATTGGAATTAAATAGCGGTTTTATTCGAANCTTTGTACGC TCGATTTCAACACGTTACTTTTCGCTGGGCCTTCACGCCCAACGGGCTTC TTGTCCTATTTTGATAAAAGTGTCGGTTTATATTTTCTTATGAAATTTAT GATAATTCTTCCTTTTTTTCGTTTTTCAGGAAAACTGGGACGATCACTTA TTCTCGGTATGCGATGATTTTTTCTTTTCCTTTCTTTGCTTTGTTTTTGA TCGATTGATTGTTAAGTGAGTTATACATTAAAATGCACATTGGGCTTTAC CAGAAACGAAAGCCGTATGTCAAACATCTTTAATGTAGGTCCGACCTTTT GTGAGCTACTTCCTTGAATACAACTGAAAAAAAATGCTTAAAGACTTCCC AAAGTCACCCACGGCACTTGGTGGGAGCAAAAGGTGTGCGTCCAAGGAGG TATACGATTTTATTCCTTTAAAGAAGCTCATGGTTTGACAGGGAAAATCT ATATCTTAAATAAAGAAGCCTTCAGGAAGCCTTCTTTTATGCACAGAAAG GATGCTCGAAGTAAACTCCTGTGTCAGAAATTTCCATCTAATTTGTAAAG TCAGACTAATAGTCATCTCCTCTAACCACCCTCATCGTTGTTTTGGTGTA TGTCTTTGAATTTATTATTTGATCACGTGACTGAGTAGTTTTTAATGATT TGTATTGTAAAAAACTGAGCTTTAATGTTTGAATGGAAATTGAACGAATA AATAAATTAGTGAATGGATTAAGTAAAGGGTTTCGACCCAGCGTATTTCA ATTCAAGCTTTATTTGGCTAGGAAGTAGTTTTTTTTTTCATTGCTTGTTA CTAAATTGATATTTTTACAATTTTTAGCTGTATTTCACTTATTTTATCTT ATCTAGTTTTGTCAATATTTTTAAGCATGACTTTGTAGCTAGAAGTTTTT ACAACACGCACACACATACACGCTTTTTGAATAATTACATCACATACATT TCATCACATCATAACATAACATTTTAATCAATTATGTCAAGATATCTACC AGAAAATCATTACATTAAACCACAGCTATCCTCAAACCCAGCTCCAGTGT TAAAAAGTAAATTAAAGACACTTTAAATTTTTTGCCAAATTGAAAGAACG ACGAGCCTATACCATGATTGACGATTTCTCTGTTTGCAGCGAAGACAAAA AAGGCTGTAACTTTTATAATATAATTGGAATTAAATAGCGGTTTTATTCG AATTCTATCAAAAGTTAATACACTCTTCTCGAGATGCATAAATTTATTGT TGTCCTCGTTTTCAAACAGATTTCATTGCTATGAAATTATACATTTAAAC CAATTTAAATTCACAAAAGGCAAACATTAACTCTAAAACAAAAGTACTGG AAATTCAAAATGTCTCATGAGGTGTAAACAGCACAATTATCATTGAGAAT ATGTAATTTTATAGCAATGAAATCTGTTTGAAAACGAGAACAACAATAAA TTTATGCATCTCGAGAAGAGTGTATTGAAGCCTCTTTTGACTACCCTAAA AATTCTATTGAGACAGACGTTTTCTTTTGGATATCTTGTCAATTAATGTT TACACACACACACACATACCATTACATCTTAACACATTGGGCTTTTCCAG AAAAAAAACGTGCACCCCCTGTTGAGGAGGTCCAACCTTTTGTGACCTAC CCCCATGGAATTCCGCTTATTTTTGACGGATTTTCGTGTACCCTTATGGA ATTCCACTGCATTTCAAACCTTACGCCCTTGGAACGAAAATGGACCTCCT CAACAGGGGGTGCACGGTTTCTTTCTGGAAAAACCCATTCATAACTCACA ATAACCATCACTAATTCACTAATCATTAATTAAAGAAACACACGGAGTTT ACTGCACTGACATTTTTTCTATGCATGATAGAAACCCCCCCCCCCCCCCC CGACACCCTTTTATGCCCCTTTTACAACGCACGATAGCCCCTCATCCCCT TGAACAGAAGCCTTCTAATATACAGTGGATTGAAATATTTGTCTTAAAAT CTGACTGGTTCAAAACCATTTCGCGACTCTCAGAGTTTCATAGATCGCGC ACTTTACATGTATCATATGCTTAAAGGGGGATTTCCATTTTATTTATCTC ATGGCTTCAAGAACTCACTTCCAGTAATGGGCGTGATAAGCTTTTGCCTT ACCAGAAGATTCTAACATCTAACATTCTTTTTAAAGAGGAAATGGTTTTA TCCTCTTTAAAGTAAAATAAACCAGCCGAGGCTGGAAGGTCAGCCAATAG AGATTAGCTAGATAGCTTTAATAAGTGGGTTAACAGATGTAAGAGATGCA CTGAAACAGAGTAGACTAAATATGTTGAATAATGTACAAAATGTGAAACA TTTGATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045286XLOC_045286Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073038-exon-scaffold_86-1575043694:857106..857219TCONS_00073038-exon-scaffold_86-1575043694:857106..857219Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1575043694:849331..849616TCONS_00073038-exon-scaffold_86-1575043694:849331..849616Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1575043694:849063..849143TCONS_00073038-exon-scaffold_86-1575043694:849063..849143Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1575043694:845927..845953TCONS_00073038-exon-scaffold_86-1575043694:845927..845953Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1575043694:838387..838795TCONS_00073038-exon-scaffold_86-1575043694:838387..838795Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1510915933:857106..857219TCONS_00073038-exon-scaffold_86-1510915933:857106..857219Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1510915933:849331..849616TCONS_00073038-exon-scaffold_86-1510915933:849331..849616Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1510915933:849063..849143TCONS_00073038-exon-scaffold_86-1510915933:849063..849143Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1510915933:845927..845953TCONS_00073038-exon-scaffold_86-1510915933:845927..845953Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1510915933:838387..838795TCONS_00073038-exon-scaffold_86-1510915933:838387..838795Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1491911889:857106..857219TCONS_00073038-exon-scaffold_86-1491911889:857106..857219Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1491911889:849331..849616TCONS_00073038-exon-scaffold_86-1491911889:849331..849616Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1491911889:849063..849143TCONS_00073038-exon-scaffold_86-1491911889:849063..849143Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1491911889:845927..845953TCONS_00073038-exon-scaffold_86-1491911889:845927..845953Clytia hemisphaericaexon
TCONS_00073038-exon-scaffold_86-1491911889:838387..838795TCONS_00073038-exon-scaffold_86-1491911889:838387..838795Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:838387..857219 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 1.80889e-07 0 4.55023e-08 0.00155397 0 0 0.0172315 0.00105198 2.15357 5.13485e-06 6.1646 6.6807 15.35 11.5606 2.65637 2.41122 4.20923e-07 0.853039 0.0071653 0 0 0 0 0 0 3.28792e-06 6.73549 5.28567
Blast
BLAST of TCONS_00073038 vs. Swiss-Prot (Human)
Match: SWAHC (Ankyrin repeat domain-containing protein SOWAHC OS=Homo sapiens GN=SOWAHC PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.056e-23
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 1
Query:  121 PEEKSWMLAAAHGNIKKLESLLKEYPSLAKKKDFVMGYTALHWAAKLGRTDIVKFIMG-AN-----VDIHSKSHGGYTPLHIAAMSGRDQVIVQLIELYNANIHTRDHSGKKPRDVVKDTVAADVQRKLG 492
            P E +WML+A+ G    LE LL   P L  K+DF+ G+T LHWAAK GR +++  ++  AN     V+I +++ GGYT LH+AAM G  +V+  L+  Y+A++  RD+SGKK    +  ++A +++  +G
Sbjct:  266 PLEHAWMLSASDGKWDSLEGLLTCEPGLLVKRDFITGFTCLHWAAKHGRQELLAMLVNFANKHQLPVNIDARTSGGYTALHLAAMHGHVEVVKLLVGAYDADVDIRDYSGKKASQYLSRSIAEEIKNLVG 395          
The following BLAST results are available for this feature:
BLAST of TCONS_00073038 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWAHC1.056e-2340.00Ankyrin repeat domain-containing protein SOWAHC OS... [more]
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