TCONS_00073037 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073037
Unique NameTCONS_00073037
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length897

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073037 ID=TCONS_00073037|Name=TCONS_00073037|organism=Clytia hemisphaerica|type=transcript|length=897bp
GAGAATATTGCTGGGTTggaattgaaaaatgttttaccGTAAAGACACAT
ATAAATATAGAGGCTTGGCTCACAGAGGAGAAGCACCACCTCAGgTTCTA
CCGGAGGAGAAAAGTTGGATGTTAGCTGCTGCCCATGGCAACATCAAGAA
GCTCGAAAGTCTCCTCAAAGAATACCCTTCCCTGGCGAAGAAGAAGGATT
TCGTTATGGGTTACACCGCCCTCCATTGGGCCGCCAAACTAGGGCGTACC
GATATTGTGAAATTCATTATGGGTGCAAACGTTGATATTCATTCGAAATC
GCATGGTGGTTACACGCCCTTACATATTGCTGCCATGAGTGGGCGGGACC
AAGTTATAGTACAGTTGATTGAACTTTATAACGCAAACATTCACACACGT
GACCATAGCGGTAAGAAACCACGGGATGTTGTCAAGGATACCGTAGCTGC
TGACGTTCAAAgaAAACTGGGACGATCACTTATTCTCGAGCCGGATTGGA
TGCTAAAAGACGCCTCAGTAGTACGGAAATCATCCGCCCAGCTAACCCAT
ATCACTCTACCGTCGCCAAAATCGGGTGATAGACGCCTTGGGCGGAACTT
CCGCCCTTCTATTAGCACGTAACAAAGAATGTGTTTTCCGACCACTGGAA
GAGGTGTATCAATCGCGTATCGAATGGAGATGGTTTTTTTGGGCGATCGA
CTTTGAGTTTAAAATGCAGACAACTGAATTTGTTCCTTCGTGTGGGTTag
acttttcaagtttttctggTTTTGAAAGAACCCAGAGTTGCTTATTCCTG
AGACTCGTCAATACCGTAACTTAGTCTAAtgtccgacacccttctttaga
gaaaggaatagtAGAAAGGTCGGAAACTATATTTTTTACTAAGCGAC
Run BLAST on NCBI

transcript from alignment at scaffold_86:838387..857199-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073037 ID=TCONS_00073037|Name=TCONS_00073037|organism=Clytia hemisphaerica|type=transcript|length=18813bp|location=Sequence derived from alignment at scaffold_86:838387..857199- (Clytia hemisphaerica)
GAGAATATTGCTGGGTTGGAATTGAAAAATGTTTTACCGTAAAGACACAT
ATAAATATAGAGGCTTGGCTCACAGAGGAGAAGCACCACCTCAGGTAAAA
TGTAACATTTCATAGCAATTTCATAGACCTCCTGAAAAACTATCTGAAAA
GTTATTTCCTTTAAAATACTTTAAAAATACGCTAATTGCTCATAAGGTAC
AAGTGTTTGGGTAGGTTTGGGTTTGGGTGTTTTTTAAATTTAGTTAAGGC
TTTGGTTTTAGTCAAAATTTGAATGGAATTGAGATTATGAATTTAAGCTA
TAACGAGGCTAGTGATAGAGTAAAGAATAATTGAGACCATGATTATATAT
CTCGTTTTGAAGAAAAAATTGAAAAAAGAAATATCTTTTTATTATAAGAA
TAATTAGCTCAATAAAAATCAAGTCCTGATATAGTAAACAATAAATGAGA
TCTCGTTAAATTTGAAGAAAGAAATTTATCTCTAATTCGAGGTCAATTAG
CTTGATAAACATTAAAAGTCCTGTTATGTAACGAGATTAGCAAGTGAATT
GATTATTTATCATTGTCATAATCAACAACATTATCCAGATCTGGATTCAA
TGCCCAGCTGAGCTTCCATCATAGCTTTTATCTACTAAACTTTCATTAAA
TTTGTTTTCATGAAAATTTGGGATGAGCTGGAGTTTTTACAAGATACTTC
ACTAATTGGTCATTTAAAGCGATAGAGATGACGCGTTCTTTAGAAAAAGT
AACAAAATAGTTTTATTACTGGTTAACGACCAACCAAATCAAATAAGAGC
TTGTAAAAACTCCAGCTTGTCCCAAAAATTTCAACTTGATAATAATGATG
GTGTCGTTTATAACTTACTTCTTTAGTTCCTTGCTTTGTTTGATGAATCT
GGGCTTGCCTTACTAAGTTTTGTAAACTACAACCTGTTTAAGAATTGTAA
ATTTATGATTGACGAATGGCTTTATGACTTCAAATTATCAGAAAACTTCA
TAAAGAAAAGTAATTATGCCACATTCTCCTGCAATAAAAAATTGTTCAAC
AGTTCCTCCAACTAATTACAATTCTAAGATAACACTGTGTCTATGTGTCA
ACCTCTCACAATATAAAAACCAATACAAATGAATGATAACTTGATGACAA
AATCTGTTATATCCTTCCTTAATCCCTCTCTATATTATCAAAACAAATCC
AATATTTTAAATAGACAGATTTTCTATACACTCTCTCCTTTAAAATGTGA
TAAGATAAATCAAAATAGAAATTTCAACCTCATCAAAATGTATTTTTTGA
TTAACTTAAAGTTTTTGTTGCCAATCATTTTTAATTAATTTTTTTAGCAT
CAAGTTCGAATATCAAAATGTCTCTCTTGGTGTTCGAGTCATAGAGGTTT
TATATCTTTGATAATATTTATGCTAATTCCTCAAAAAGGGTCTTATATCC
CTAGAGCCCTAAAATAGCTTAAAAATAATAGATAAAATATTAATCAAATT
CATCTGGAACACTGTCCTATACCTTCCTCTGATCACAATACCATCATCAT
AGTCATTAATAAGAAAACAGGCATTCAAATTGATACCAAACCGTAGAAAA
ATGTTAGCCTGAGGAAACCGTTTTGAATCAAATGTTTTCTGTTCCCAATT
ATGATCAAACAGGAAGTTCTCTATAAAATGTTGTCAACGCAACAATGATA
TGTCAAGTAATTGATTCCTTTATTTCTTAATACGGTATATTAAAATGAAC
ATCCTCAACTAGAATCTTTAATGAGCTTATTAACAAGAAAATAATTGTTT
GATATAATACTGTAGAAAAAAAAGTCAGCTTTGTACTGTATTACTTTATA
TATGTGTACACTTTGTTCAAAGAAAGTCTGTCAACTTTTAAGTCGTTCTG
TTTTTATGAACCTTCTTTGTGTGCTAGTGCTAATTGCGAACTTAATGTGA
ACATTTAGATTAACTTATTTATATACTATATCTGGCTATATATCTCCGTT
TCTAAGTGGTTATTTCTTATGTTTTTATGACTATTTTATGGATTTCAATC
ACTTGTTGTCTTGTTGTTTTGGACACACTGGTCCTTCTACACTCATTCTA
AACCTGCTGAATTTTGTACTAACATTCTAATTGGACGTCGTTTGAAGCGA
ACATCATTCTATCAACCAATATTATACAAAAAAATTACTCTCTGTATCGT
TTTAAAAAGTTATAAAAAGGAAAACAAAATTGATTCTTAAATGGATGAAT
GAATCAAAAAAAAGAACAGTTACAGTAGTACCAACTGAGATGCATGTTTC
CTTGTGTTGACTTCTTCTAATATACTCACTGCTGTAAACGGAAATCAAAA
AAAACTGAAATCTATTTTAACTTTGTTGTACATCGATCTCTCATTTTGTC
ATCCGGTTTTCGATTCGATTTGACCAGTATGGAAACTTTAACTCAGCAAT
CACCCACACATCAAAATCATCACCATGAAACACAGCTCGTTGTAAGAAAA
GTTTTTCTTATTTATTTTTCATTCGTTCGTTAAGATAATCCTAACTAGTA
GATGTCAAATTTTAACTGACTGTGTACTGTGTTTTGGTTATGAGTTATCA
ATTAAGCTGATCACTAGAACATCCTTTAAGAGAGTGATTAGTCTGTCGAA
TTTAAAAATTTTACTGGCTATGTAAAAATCAAGGATCTTCTAGATTGGAT
AACCATCTTATTCGATTAAAAACGCTAGATACACTTGAACAACTTTGTTT
GCTATTTGCTGGAAATGTGGGTAAGTGTACTTTAATCTTAAAACCTAATT
TCAGTGAAATTTAAATGTTTGGGTCTTCTAGATTGGATAACTGTCATTTA
ACACTCTTTAATAAAACGTTAGATACACTAAAACAATTTTAAAGTGGACT
TATGGGCAAGTGTACTTAAATCTTAAAACCTAATTTCGGTGAAATTTAAA
ATGTTTGTTAAAAAAGTCATTATAGTATTAAATTACAAGATTGATATGCG
ATGCATATGATTGCCAATCTCTGGTTTGATAAAAAATTTTAAGTAATAAT
TCACTAAATAATTAAGCTGACTAGTCTCTCAAGATTTATACTTTGAAAAA
TAATTGAAAAGTTACTTCCTTCTGTGTAGTCAAATGTTATTTTGACAAAA
TATTATTTGTACCAACATTGGAAAGATTGATTTTGTATTTAACATTGACC
TTTAATATCTAATGTGCCTAGAAGTTGATACTTCTTTCGATGTACTTTTC
CATGTCTCTCCTATATGACTCTTTGTGGCTGGATTTTTTTTGAAGGAAAT
GAGGACTGAGGTTGGTACTTTATTTAATGTTTTGTTTTACATATACATAT
AAAAAGTGCTCTTTTATAAACTTGCTATTTACTTTTCATACGTTGTTACC
TAACCTACTGAGTTCTTACTGGAAAAATTTAGTTACACTTTCCTTCTATT
ATTACACTTTGTAGCGTGGCGTTGTTTTCCAAAAGGTACTTTCCATACAC
AGTCAGAATCTGACTGTTTCTAGAAAAATAATTTACATAAAAATTCCAAC
TAAACCTTATTTATACACTTTAAATTACCAAAGCACAGTTTCTCATTGTA
ACTTTTTGTTGAGATTTGAGATTTTTTTCTACTGTCCAAGAAGATATCTC
GCCTCTTCTTGAATTTATGGTTTTCTATGCTCTCTTTCTACTGTTCTGTT
AGACCTATTTTTAACGAGCTATGAAATATTTCTTGTAATCTTGTGTGAAA
TGAAACACGTTGCTCTAAAAGTTCATCATCAAAGTTCTCATCTCCCCGAA
TACACACGTTTTTTATAAGGACATCCAAAATTTCTGAAGCCTTCAGATGT
TCTTAATTTTTTGAGTTTTAAGTCTAAAAATGGTCTGAACATGTTCTTAT
TTTCGCCATTTTGTGAATAATTTCGTCCATTTTCCTAAGGAATCGGTTGT
TTAGAGTCAAGAAAGCCTTGAAATGTTCTTAACTTGTTCTTAATATTTTT
GCCATCAGAGGCTCTTGTTCTCATATAGTTTGTTCTTATAAAAAACGTGT
AACAAAAGTTCAATTACTACTTTGGTGTAGAAATAGTTTTATTTTCATAA
GTCTAGCAAGTTTGAAATAAAGTGAGAATATTGTTCAAGTGGAAATATCG
AATTTATTGTAGCTTAGCTTAGCTCTGATTAAGTTTATACTATTTTTAAG
CACTTTGAACTTTAGCTTTATTAAGCTACTTAAAATTAGGGAACTAGTTA
TTGAAATAAATCAGAAACAGTATTTTTTTCAGAGACATAGTAAATTTGTT
GTCGTTTCTTTTGTTGGTGGTAATGTATTATAATAAAGTTTATATCTTTT
AAAGAGGGCACTGATTGGTTTATTAGACGAGCAACCATAGTTCGCCCCCC
CCCCCCTTTNCTTTTGTTGGTGGTAATGTATTATAATAAAGCTTATATCT
TTTAAAGAGGGTACTGATTGGTTTATTAGACGAGCAACCATAGTTCGTCC
CCCCTTTCTTAATGACACTTCCTGAACAAATGGAGAAGGGGGGATCAGAA
ATTTTTATGAAAAAGGGAGATAGCAAGGAAAGGGGGGGGGTCATTTAAGA
TAGGGGGCGGTCAGACCCCTTTCCGCACTATGAGAAACTGCCAAAACAAA
CAATAGTGCCTATGAAAACAGAATATTACTACCAAGAATCGAAAGATATC
CCAATGGATACCCTGTTCTCATTTAGTATCATTTTCAGACATTATTGGAC
AAACAAAAATAAAAAAACTTACAGTAATAAGAATATGAATGCTAGAGTAG
AATTTCATACATATAAAATAGATAACATTAGTCGTGTGTGCAAAGATGTG
TTGTGAGCTAGAAAGATTTTTGATGACCTAACTTGATATTTGAGTAGATT
CGTCTTTTCCTGACTAATTCGCGTGCGTCTTTTATATACTTTATCGAATT
TTTCTACATCTCCCGTACAGAGATATCGGTTAATAAAAAAATTGTGTAAG
AATTTTAATGGATTTTTATTCTCTTTGACTTTACGCTCTATGTTGTTCCA
ATATGTTATCAAATTTTTCAATCTTATAGAAAACGTAGCATGATTGAGTT
GATGTTATGAGGTTATGATGACCAGAATTATAATATTTCGTCAGTTTGGA
TAATGTGAACGTTGTTTGAGAGCGAGCAGTAATACAATTTTGTTGTAGAA
GTTTCTTAACTGATGACCAAAATAATAGAATGATATTCACATCACAAAGT
TGACTGCTTTTAATTCTGTTACTTTAATAGGTTTCCTAAATTTCTTTTAC
TATCTTAAATATGCAAAACTTTTTGGTCAAAATAATACAAAAGCTTCTGG
TCTCAAGAAAATATACTTTACCATCTATTTGAAGGAGCTCTAAGTCCCAA
CAAAAAAGTGTATTATAATCATTTTAACCTCTATTAGTGATGTATCGCAG
AGCTGCTGCTTCTAATTTTATTTCCCACGTCCCAGTACTTCACCAAACAT
TATAACTTTTAAAAATTATGATAGTCAAAAATTTGGAAATTTTATTTTGT
TCTTCGTGTTCTTTGTACTCATTTATTTTTTTCCCTTCGTTATTTTTTCT
CATCCAATATTGATTTCGGTATTTGCCAATCTTCATTATTCCCCCTTAAT
TTCTTCTTTATGTTATAATCTAAGACCTACCACTGGTAGTTCTTATCTTC
CTATATTATTCGTAAACAAAGCAATAACCTAACAATACTGTTATCTTTAT
CCCTCATACAATGCTAAGATTTAAAATTCTTGAAAATTCAGGTATAGATA
AAGGGTTAAAAATAGTTGTTGAAAAATCGACTAAGATATTATAGTAACTA
GAAACAGAGATAGAAATGAAGATTTTTCTTCACGTTCTGCAAAAAAAGAA
ATAGGCGAGGTAGGGGTTTCAAGTGATTAAAGAAGAGTATTTTTTCGCTT
ATTGTTTTTCAACTTGAAATTTTTCCAAAAGAAAATTTGATAGAAACAAG
TAGAGTTTAGCAGTATGAAATATTGTTCATGTGAAATTTTTTACGTTTAA
CGTTGGAGAATTAAAAGTTTGAAATTAAAATTAAAATTTGAAAATCTCAC
TTGTTCAATTTGGAATAGTGGAGAGCAATAAAAGGTGTGAATAAAAAGCT
CAACCATCGGTGAACAGAATGTAGTTTTTACGAGTCAAAAATTTATGATA
ATAATTCGAATTGGAATAAATTAATGAATAAAGATGACGACCACGAAACG
GTACTTACGACGTTTCAGTAGCGTCGATCGTGCGTCCGTTGATCGGGAAC
AGGTGAGTCCTAAAGGAAAAGATCTCTCTTTCATCAACGGATTAGAATAG
GTGGATTAAGAACTCATAGAAAACACTCCTCGTTAGGTTATCAAACTTTT
TTACGAGTTTGCTAGCAATTAAAACTTGATAAGTTGTAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAT
CTCTCTTGGGAGCAACGAGAGAAGTTAATCCACCTATTCTAATCCGTTGC
TTTCATGAAAACTGTCTTAAAGAACAGATTGAGAAAACCCATATTTGTGT
ATTCGTGTGTGTTGCTTAGCAGATCCTGTTGGAGAATAATAGACATTTTG
TACATTTCGATGCATTGCTCTTAAAGGGAAAAAAATGATCCCTCAAATTT
TAAATTAATGAATTTACTTAAGGGTTTAAAACCTTTCAAAAACTTGAAAC
TGAAGATGAAAAAAATGGGTTTAAACTAAAATTCATATATTTTTCTGTAA
TTTTAAACTTTGCCGCATTCAAACTTTTTACTACCTTTCCTATGGGACAA
AATTTACAATCCTCTTGGAAGGTTTGCTCTGGGGTTTTCCCGGGGAGGGG
TAATTGTTCTTCCTCATGAGCACATTTTAATCTCACATCAAGTTTAAGTT
TTATCTCTTTTCCTGTTAACAGATCGTAAAATTTTAAGTCACTTATAAAA
GTCTCAATCTTAATTTTTTTTATCAATTTTCAGGTTCTACCGGAGGAGAA
AAGTTGGATGTTAGCTGCTGCCCATGGCAACATCAAGAAGCTCGAAAGTC
TCCTCAAAGAATACCCTTCCCTGGCGAAGAAGAAGGATTTCGTTATGGGT
TACACCGCCCTCCATTGGGCCGCCAAACTAGGGCGTACCGATATTGTGAA
ATTCATTATGGGTGCAAACGTTGATATTCATTCGAAATCGCATGGTGGTT
ACACGCCCTTACATATTGCTGCCATGAGTGGGCGGGACCAAGTTATAGTA
CAGTTGATTGAACTTTATAGTAAGTGTTATTTTACTTTCACTATATGACG
TTCGAAATCTGCCCGGGTAGTTTGATTCTTGGCGTTCGATCGGACGTTTA
CCTTGTAGCATCAAAATAATCACCAATAAATTCCTTCGGTTTGACACTTC
TTAGACTATTGTGACCTGTTTCAACAACTCATCTTTTTTCAAATTCTTTT
TTACAGACGCAAACATTCACACACGTGACCATAGCGGTAAGAAACCACGG
GATGTTGTCAAGGATACCGTAGCTGCTGACGTTCAAAGTAAGTCCGCCAT
TATGGTGTTCATTTCGAATGTCTCAACAACTTGAAGTAATTCTCTGGTCT
TCAGAGGAATACCATAGACTTTTTTTTTTTGCTTATTTATTTATTTTTCC
TTTTCTTTTCTTTTCTTTTACATAGTCTAGTACCTCTAGTACCTCTGGCG
AAAAAAATCATAGACTATTTTATCGCTCTTTTTATCGAACTCATTACAAG
TCAACGATATCAGATTCCTTTTGATCTCCGAGTTATGGATGTTCAATTTA
ATGAGAGTTCCATTCTTAGACAAATAAGGTATAAGTTAGGTAAGGAGTCC
TTCAGTGGTCCCCATTGAGTTTCAAGCCGAAGGCTAGAGGTCAATCTCCT
TGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCGGCCTTGAGC
GACCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAGGTTTTTACACAAATGACAGATTGAAACTAAAATTTACCGCTTAA
TTTCGAAAAATATATCACTCGAAAACAAAGGANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGATTCAATCCGTCATCAAAAATA
CGGCGCATATTTTAAGGCTTCAATTTTTCTTGCCTGAGAAAGGTTAGAGA
TTGACCTCTAGCCCTTCGGGCTTGAAACACTCAATGGTGGTCCCACATGC
GTTCCAGCTTTCGTTTAGTGTCTAGATGTATGTCGCCTTTTTGGCCCAGC
GCTAAGCGAGTGGGCCTTTCATTTGCAACGTTCTGTTCGTTCGTGTGTCC
GTCCGTTTTGGTAGAAACGGCGCTTAAAACCAGTATCACACTTTTTGCCG
TCTGGATAGGGAAAAGCTTGCTAAAGTCTGATACTGGCTATAAAAGATAT
ATTTTCTGATTCCGCGCTCCTTCAAAACAATTTTCAAAACAAACCAAGAT
GGCGGTCGAAGCGAGGAGGTTGATTCATACTTTCTTGAACATTTTCTTTG
CTTAGTGGTCAAGAGATTTTCAAACCAAAGAAATTTTGTAAAGATTTTCT
TTATAAACCTTTTTCAACATTCTTATAGTCTTTGCTCAAGTTTTCATAAA
TTTTTATGAGTGAAATTCTACCTTAAATCACTTTCATTTTTTTAGTTTCT
TGTATTCAAAAAGACTTTATTTTTAGGAAATAATGGCTTCTGATATAGAA
ATAAATAAACTGAAATGCAGCTCATGTGTAAATTTGAATAAGATTTGAAC
TTTTTTCTTGATGCTACAGAAGAAAACAGTCACTTCTGGATCTGTCGATG
TTAACAACGGTCAGTACAACATACAGTGGTTGGGACGTGGTATGATTTTC
AAACTCAACACATAATTATTTCAAGTAAACTAATTCTGGAATTTGGTAAT
GGAAACTAAAATGGAGCTCATGTGTAAATTGGAACAAGATTGGAACTTTT
TCCGAGATGCTACGCGTGCGTGAAAATTATTTTTTCTGGATCTGTCTCGT
TTGGCGAAAGGTGCGGTGGCTTGATTTTTCAAACTCGACACAGAATTATT
TCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACA
TATGCTGCTTTGTACGCTCGATTTCAACACGTTACTTTTCGCTGGGCCTT
CACGCCCAACGGGCTTCTTGTCCTATTTTGATAAAAGTGTCGGTTTATAT
TTTCTTATGAAATTTATGATAATTCTTCCTTTTTTTCGTTTTTCAGGAAA
ACTGGGACGATCACTTATTCTCGGTATGCGATGATTTTTTCTTTTCCTTT
CTTTGCTTTGTTTTTGATCGATTGATTGTTAAGTGAGTTATACATTAAAA
TGCACATTGGGCTTTACCAGAAACGAAAGCCGTATGTCAAACATCTTTAA
TGTAGGTCCGACCTTTTGTGAGCTACTTCCTTGAATACAACTGAAAAAAA
ATGCTTAAAGACTTCCCAAAGTCACCCACGGCACTCGGTGGGAGCAAAAG
GTGTGCGTCCAAGGAGGTATACGATTTTATTCCTTTAAAGAAGCTCATGA
TTTGACAGGGAAAATCTATATCTTAAATAAAGAAGCCTTCAGGAAGCCTT
CTTTTATGCACAGAAAGGATGATCGAAGTAAACTCCTGTGTCAGAAATTT
CCATCTAATTTGTAAAGTCAGACTAATAGTCATCTCCTCTAACCACCCTC
ATCGTTGTTTTGGTGTATGTCTTTGAATTTATTATTTGATAACGTGACTG
AGTAGTTTTTAATGATTTGTATTGTAAAAAACTGAGCTTTAATGTTTGAA
TGGAAATTGAACGAATAAATAAATTAGTGAATGGATTAAGTAAAGGGTTT
CGACCCAGCGTATTTCAATTCAAGCTTTATTTGGCTAGGAAGTAGTTTTT
TTTTTCATTGCTTGTTACTAAATTGATATTTTTACAATTTTTAGCTGTAT
TTCACTTATTTTATCTTATCTAGTTTTGTCAATATTTTTAAGCATGACTT
TGTAGCTAGAAGTTTTTACAACACGCACACACATACACGCTTTTTGAATA
ATTACATCACATACATTTCATCACATCATAACATAACATTTTAATCAATT
ATGTCAAGATATCTACCAGAAAATCATTACATTAAACCACAGCTATCCTC
AAACCCAGCTCCAGTGTTAAAAAGTAAATTAAAGACACTTTAAATTTTTT
GCCAAATTGAAAGAACGACGAGCCTAAACCATGATTGACGATTTCTCTGT
TTGCAGCGAAGACAAAAAAGGCTGTAACTTTTATAATATAATTGGAATTA
AATAGCGGTTTTATTCGAANCTTTGTACGCTCGATTTCAACACGTTACTT
TTCGCTGGGCCTTCACGCCCAACGGGCTTCTTGTCCTATTTTGATAAAAG
TGTCGGTTTATATTTTCTTATGAAATTTATGATAATTCTTCCTTTTTTTC
GTTTTTCAGGAAAACTGGGACGATCACTTATTCTCGGTATGCGATGATTT
TTTCTTTTCCTTTCTTTGCTTTGTTTTTGATCGATTGATTGTTAAGTGAG
TTATACATTAAAATGCACATTGGGCTTTACCAGAAACGAAAGCCGTATGT
CAAACATCTTTAATGTAGGTCCGACCTTTTGTGAGCTACTTCCTTGAATA
CAACTGAAAAAAAATGCTTAAAGACTTCCCAAAGTCACCCACGGCACTTG
GTGGGAGCAAAAGGTGTGCGTCCAAGGAGGTATACGATTTTATTCCTTTA
AAGAAGCTCATGGTTTGACAGGGAAAATCTATATCTTAAATAAAGAAGCC
TTCAGGAAGCCTTCTTTTATGCACAGAAAGGATGCTCGAAGTAAACTCCT
GTGTCAGAAATTTCCATCTAATTTGTAAAGTCAGACTAATAGTCATCTCC
TCTAACCACCCTCATCGTTGTTTTGGTGTATGTCTTTGAATTTATTATTT
GATCACGTGACTGAGTAGTTTTTAATGATTTGTATTGTAAAAAACTGAGC
TTTAATGTTTGAATGGAAATTGAACGAATAAATAAATTAGTGAATGGATT
AAGTAAAGGGTTTCGACCCAGCGTATTTCAATTCAAGCTTTATTTGGCTA
GGAAGTAGTTTTTTTTTTCATTGCTTGTTACTAAATTGATATTTTTACAA
TTTTTAGCTGTATTTCACTTATTTTATCTTATCTAGTTTTGTCAATATTT
TTAAGCATGACTTTGTAGCTAGAAGTTTTTACAACACGCACACACATACA
CGCTTTTTGAATAATTACATCACATACATTTCATCACATCATAACATAAC
ATTTTAATCAATTATGTCAAGATATCTACCAGAAAATCATTACATTAAAC
CACAGCTATCCTCAAACCCAGCTCCAGTGTTAAAAAGTAAATTAAAGACA
CTTTAAATTTTTTGCCAAATTGAAAGAACGACGAGCCTATACCATGATTG
ACGATTTCTCTGTTTGCAGCGAAGACAAAAAAGGCTGTAACTTTTATAAT
ATAATTGGAATTAAATAGCGGTTTTATTCGAATTCTATCAAAAGTTAATA
CACTCTTCTCGAGATGCATAAATTTATTGTTGTCCTCGTTTTCAAACAGA
TTTCATTGCTATGAAATTATACATTTAAACCAATTTAAATTCACAAAAGG
CAAACATTAACTCTAAAACAAAAGTACTGGAAATTCAAAATGTCTCATGA
GGTGTAAACAGCACAATTATCATTGAGAATATGTAATTTTATAGCAATGA
AATCTGTTTGAAAACGAGAACAACAATAAATTTATGCATCTCGAGAAGAG
TGTATTGAAGCCTCTTTTGACTACCCTAAAAATTCTATTGAGACAGACGT
TTTCTTTTGGATATCTTGTCAATTAATGTTTACACACACACACACATACC
ATTACATCTTAACACATTGGGCTTTTCCAGAAAAAAAACGTGCACCCCCT
GTTGAGGAGGTCCAACCTTTTGTGACCTACCCCCATGGAATTCCGCTTAT
TTTTGACGGATTTTCGTGTACCCTTATGGAATTCCACTGCATTTCAAACC
TTACGCCCTTGGAACGAAAATGGACCTCCTCAACAGGGGGTGCACGGTTT
CTTTCTGGAAAAACCCATTCATAACTCACAATAACCATCACTAATTCACT
AATCATTAATTAAAGAAACACACGGAGTTTACTGCACTGACATTTTTTCT
ATGCATGATAGAAACCCCCCCCCCCCCCCCCGACACCCTTTTATGCCCCT
TTTACAACGCACGATAGCCCCTCATCCCCTTGAACAGAAGCCTTCTAATA
TACAGTGGATTGAAATATTTGTCTTAAAATCTGACTGGTTCAAAACCATT
TCGCGACTCTCAGAGTTTCATAGATCGCGCACTTTACATGTATCATATGC
TTAAAGGGGGATTTCCATTTTATTTATCTCATGGCTTCAAGAACTCACTT
CCAGTAATGGGCGTGATAAGCTTTTGCCTTACCAGAAGATTCTAACATCT
AACATTCTTTTTAAAGAGGAAATGGTTTTATCCTCTTTAAAGTAAAATAA
ACCAGCCGAGGCTGGAAGGTCAGCCAATAGAGATTAGCTAGATAGCTTTA
ATAAGTGGGTTAACAGATGTAAGAGATGCACTGAAACAGAGTAGACTAAA
TATGTTGAATAATGTACAAAATGTGAAACATTTGATAANNNNNNNNNNNN
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NNNNNNNNNNNNNNTCACGGAACCAATAGCTGATTGGCTGTAAGTGACGT
AAAATCAGTCAATACGTCACTTTCAACCAATCAGCTGTTGGGTCCGTGGA
AGACATTGCAATGTTGCATATGGTGAATTCATGAATTCGACGAAAGTTTT
CTAAATTTTGATTGATCCACTGTATATTGAAAATTAGTGTTCCTTTCAAA
TCACGTTGTCCTCTCTTATATACATGTAATATTTCCCTACAAACTTGTAC
ACAGAGCCGGATTGGATGCTAAAAGACGCCTCAGTAGTACGGAAATCATC
CGCCCAGCTAACCCATATCACTCTACCGTCGCCAAAATCGGGTGATAGAC
GCCTTGGGCGGAACTTCCGCCCTTCTATTAGCACGTAACAAAGAATGTGT
TTTCCGACCACTGGAAGAGGTGTATCAATCGCGTATCGAATGGAGATGGT
TTTTTTGGGCGATCGACTTTGAGTTTAAAATGCAGACAACTGAATTTGTT
CCTTCGTGTGGGTTAGACTTTTCAAGTTTTTCTGGTTTTGAAAGAACCCA
GAGTTGCTTATTCCTGAGACTCGTCAATACCGTAACTTAGTCTAATGTCC
GACACCCTTCTTTAGAGAAAGGAATAGTAGAAAGGTCGGAAACTATATTT
TTTACTAAGCGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045286XLOC_045286Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073037-exon-scaffold_86-1575043694:857106..857199TCONS_00073037-exon-scaffold_86-1575043694:857106..857199Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1575043694:849331..849616TCONS_00073037-exon-scaffold_86-1575043694:849331..849616Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1575043694:849063..849143TCONS_00073037-exon-scaffold_86-1575043694:849063..849143Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1575043694:844714..844740TCONS_00073037-exon-scaffold_86-1575043694:844714..844740Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1575043694:838387..838795TCONS_00073037-exon-scaffold_86-1575043694:838387..838795Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1510915933:857106..857199TCONS_00073037-exon-scaffold_86-1510915933:857106..857199Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1510915933:849331..849616TCONS_00073037-exon-scaffold_86-1510915933:849331..849616Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1510915933:849063..849143TCONS_00073037-exon-scaffold_86-1510915933:849063..849143Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1510915933:844714..844740TCONS_00073037-exon-scaffold_86-1510915933:844714..844740Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1510915933:838387..838795TCONS_00073037-exon-scaffold_86-1510915933:838387..838795Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1491911889:857106..857199TCONS_00073037-exon-scaffold_86-1491911889:857106..857199Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1491911889:849331..849616TCONS_00073037-exon-scaffold_86-1491911889:849331..849616Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1491911889:849063..849143TCONS_00073037-exon-scaffold_86-1491911889:849063..849143Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1491911889:844714..844740TCONS_00073037-exon-scaffold_86-1491911889:844714..844740Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1491911889:838387..838795TCONS_00073037-exon-scaffold_86-1491911889:838387..838795Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:838387..857199 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	4.04189e-08	0.00835509	0	0	0	7.12095	0.497064	3.34315	6.58234	0	0.0763663	2.6529e-09	0	1.34556e-07	1.81433	7.13503e-06	0	0	0	0	0	0	0	1.95825	1.25201e-05	0.000157893
Blast
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BLAST of TCONS_00073037 vs. Swiss-Prot (Human)
Match: SWAHC (Ankyrin repeat domain-containing protein SOWAHC OS=Homo sapiens GN=SOWAHC PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.509e-24
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:  101 PEEKSWMLAAAHGNIKKLESLLKEYPSLAKKKDFVMGYTALHWAAKLGRTDIVKFIMG-AN-----VDIHSKSHGGYTPLHIAAMSGRDQVIVQLIELYNANIHTRDHSGKKPRDVVKDTVAADVQRKLG 472
            P E +WML+A+ G    LE LL   P L  K+DF+ G+T LHWAAK GR +++  ++  AN     V+I +++ GGYT LH+AAM G  +V+  L+  Y+A++  RD+SGKK    +  ++A +++  +G
Sbjct:  266 PLEHAWMLSASDGKWDSLEGLLTCEPGLLVKRDFITGFTCLHWAAKHGRQELLAMLVNFANKHQLPVNIDARTSGGYTALHLAAMHGHVEVVKLLVGAYDADVDIRDYSGKKASQYLSRSIAEEIKNLVG 395
The following BLAST results are available for this feature:
BLAST of TCONS_00073037 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWAHC9.509e-2440.00Ankyrin repeat domain-containing protein SOWAHC OS... [more]
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