TCONS_00073037 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073037
Unique NameTCONS_00073037
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length897

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073037 ID=TCONS_00073037|Name=TCONS_00073037|organism=Clytia hemisphaerica|type=transcript|length=897bp
GAGAATATTGCTGGGTTggaattgaaaaatgttttaccGTAAAGACACAT
ATAAATATAGAGGCTTGGCTCACAGAGGAGAAGCACCACCTCAGgTTCTA
CCGGAGGAGAAAAGTTGGATGTTAGCTGCTGCCCATGGCAACATCAAGAA
GCTCGAAAGTCTCCTCAAAGAATACCCTTCCCTGGCGAAGAAGAAGGATT
TCGTTATGGGTTACACCGCCCTCCATTGGGCCGCCAAACTAGGGCGTACC
GATATTGTGAAATTCATTATGGGTGCAAACGTTGATATTCATTCGAAATC
GCATGGTGGTTACACGCCCTTACATATTGCTGCCATGAGTGGGCGGGACC
AAGTTATAGTACAGTTGATTGAACTTTATAACGCAAACATTCACACACGT
GACCATAGCGGTAAGAAACCACGGGATGTTGTCAAGGATACCGTAGCTGC
TGACGTTCAAAgaAAACTGGGACGATCACTTATTCTCGAGCCGGATTGGA
TGCTAAAAGACGCCTCAGTAGTACGGAAATCATCCGCCCAGCTAACCCAT
ATCACTCTACCGTCGCCAAAATCGGGTGATAGACGCCTTGGGCGGAACTT
CCGCCCTTCTATTAGCACGTAACAAAGAATGTGTTTTCCGACCACTGGAA
GAGGTGTATCAATCGCGTATCGAATGGAGATGGTTTTTTTGGGCGATCGA
CTTTGAGTTTAAAATGCAGACAACTGAATTTGTTCCTTCGTGTGGGTTag
acttttcaagtttttctggTTTTGAAAGAACCCAGAGTTGCTTATTCCTG
AGACTCGTCAATACCGTAACTTAGTCTAAtgtccgacacccttctttaga
gaaaggaatagtAGAAAGGTCGGAAACTATATTTTTTACTAAGCGAC
Run BLAST on NCBI

transcript from alignment at scaffold_86:838387..857199-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073037 ID=TCONS_00073037|Name=TCONS_00073037|organism=Clytia hemisphaerica|type=transcript|length=18813bp|location=Sequence derived from alignment at scaffold_86:838387..857199- (Clytia hemisphaerica)
GAGAATATTGCTGGGTTGGAATTGAAAAATGTTTTACCGTAAAGACACAT ATAAATATAGAGGCTTGGCTCACAGAGGAGAAGCACCACCTCAGGTAAAA TGTAACATTTCATAGCAATTTCATAGACCTCCTGAAAAACTATCTGAAAA GTTATTTCCTTTAAAATACTTTAAAAATACGCTAATTGCTCATAAGGTAC AAGTGTTTGGGTAGGTTTGGGTTTGGGTGTTTTTTAAATTTAGTTAAGGC TTTGGTTTTAGTCAAAATTTGAATGGAATTGAGATTATGAATTTAAGCTA TAACGAGGCTAGTGATAGAGTAAAGAATAATTGAGACCATGATTATATAT CTCGTTTTGAAGAAAAAATTGAAAAAAGAAATATCTTTTTATTATAAGAA TAATTAGCTCAATAAAAATCAAGTCCTGATATAGTAAACAATAAATGAGA TCTCGTTAAATTTGAAGAAAGAAATTTATCTCTAATTCGAGGTCAATTAG CTTGATAAACATTAAAAGTCCTGTTATGTAACGAGATTAGCAAGTGAATT GATTATTTATCATTGTCATAATCAACAACATTATCCAGATCTGGATTCAA TGCCCAGCTGAGCTTCCATCATAGCTTTTATCTACTAAACTTTCATTAAA TTTGTTTTCATGAAAATTTGGGATGAGCTGGAGTTTTTACAAGATACTTC ACTAATTGGTCATTTAAAGCGATAGAGATGACGCGTTCTTTAGAAAAAGT AACAAAATAGTTTTATTACTGGTTAACGACCAACCAAATCAAATAAGAGC TTGTAAAAACTCCAGCTTGTCCCAAAAATTTCAACTTGATAATAATGATG GTGTCGTTTATAACTTACTTCTTTAGTTCCTTGCTTTGTTTGATGAATCT GGGCTTGCCTTACTAAGTTTTGTAAACTACAACCTGTTTAAGAATTGTAA ATTTATGATTGACGAATGGCTTTATGACTTCAAATTATCAGAAAACTTCA TAAAGAAAAGTAATTATGCCACATTCTCCTGCAATAAAAAATTGTTCAAC AGTTCCTCCAACTAATTACAATTCTAAGATAACACTGTGTCTATGTGTCA ACCTCTCACAATATAAAAACCAATACAAATGAATGATAACTTGATGACAA AATCTGTTATATCCTTCCTTAATCCCTCTCTATATTATCAAAACAAATCC AATATTTTAAATAGACAGATTTTCTATACACTCTCTCCTTTAAAATGTGA TAAGATAAATCAAAATAGAAATTTCAACCTCATCAAAATGTATTTTTTGA TTAACTTAAAGTTTTTGTTGCCAATCATTTTTAATTAATTTTTTTAGCAT CAAGTTCGAATATCAAAATGTCTCTCTTGGTGTTCGAGTCATAGAGGTTT TATATCTTTGATAATATTTATGCTAATTCCTCAAAAAGGGTCTTATATCC CTAGAGCCCTAAAATAGCTTAAAAATAATAGATAAAATATTAATCAAATT CATCTGGAACACTGTCCTATACCTTCCTCTGATCACAATACCATCATCAT AGTCATTAATAAGAAAACAGGCATTCAAATTGATACCAAACCGTAGAAAA ATGTTAGCCTGAGGAAACCGTTTTGAATCAAATGTTTTCTGTTCCCAATT ATGATCAAACAGGAAGTTCTCTATAAAATGTTGTCAACGCAACAATGATA TGTCAAGTAATTGATTCCTTTATTTCTTAATACGGTATATTAAAATGAAC ATCCTCAACTAGAATCTTTAATGAGCTTATTAACAAGAAAATAATTGTTT GATATAATACTGTAGAAAAAAAAGTCAGCTTTGTACTGTATTACTTTATA TATGTGTACACTTTGTTCAAAGAAAGTCTGTCAACTTTTAAGTCGTTCTG TTTTTATGAACCTTCTTTGTGTGCTAGTGCTAATTGCGAACTTAATGTGA ACATTTAGATTAACTTATTTATATACTATATCTGGCTATATATCTCCGTT TCTAAGTGGTTATTTCTTATGTTTTTATGACTATTTTATGGATTTCAATC ACTTGTTGTCTTGTTGTTTTGGACACACTGGTCCTTCTACACTCATTCTA AACCTGCTGAATTTTGTACTAACATTCTAATTGGACGTCGTTTGAAGCGA ACATCATTCTATCAACCAATATTATACAAAAAAATTACTCTCTGTATCGT TTTAAAAAGTTATAAAAAGGAAAACAAAATTGATTCTTAAATGGATGAAT GAATCAAAAAAAAGAACAGTTACAGTAGTACCAACTGAGATGCATGTTTC CTTGTGTTGACTTCTTCTAATATACTCACTGCTGTAAACGGAAATCAAAA AAAACTGAAATCTATTTTAACTTTGTTGTACATCGATCTCTCATTTTGTC ATCCGGTTTTCGATTCGATTTGACCAGTATGGAAACTTTAACTCAGCAAT CACCCACACATCAAAATCATCACCATGAAACACAGCTCGTTGTAAGAAAA GTTTTTCTTATTTATTTTTCATTCGTTCGTTAAGATAATCCTAACTAGTA GATGTCAAATTTTAACTGACTGTGTACTGTGTTTTGGTTATGAGTTATCA ATTAAGCTGATCACTAGAACATCCTTTAAGAGAGTGATTAGTCTGTCGAA TTTAAAAATTTTACTGGCTATGTAAAAATCAAGGATCTTCTAGATTGGAT AACCATCTTATTCGATTAAAAACGCTAGATACACTTGAACAACTTTGTTT GCTATTTGCTGGAAATGTGGGTAAGTGTACTTTAATCTTAAAACCTAATT TCAGTGAAATTTAAATGTTTGGGTCTTCTAGATTGGATAACTGTCATTTA ACACTCTTTAATAAAACGTTAGATACACTAAAACAATTTTAAAGTGGACT TATGGGCAAGTGTACTTAAATCTTAAAACCTAATTTCGGTGAAATTTAAA ATGTTTGTTAAAAAAGTCATTATAGTATTAAATTACAAGATTGATATGCG ATGCATATGATTGCCAATCTCTGGTTTGATAAAAAATTTTAAGTAATAAT TCACTAAATAATTAAGCTGACTAGTCTCTCAAGATTTATACTTTGAAAAA TAATTGAAAAGTTACTTCCTTCTGTGTAGTCAAATGTTATTTTGACAAAA TATTATTTGTACCAACATTGGAAAGATTGATTTTGTATTTAACATTGACC TTTAATATCTAATGTGCCTAGAAGTTGATACTTCTTTCGATGTACTTTTC CATGTCTCTCCTATATGACTCTTTGTGGCTGGATTTTTTTTGAAGGAAAT GAGGACTGAGGTTGGTACTTTATTTAATGTTTTGTTTTACATATACATAT AAAAAGTGCTCTTTTATAAACTTGCTATTTACTTTTCATACGTTGTTACC TAACCTACTGAGTTCTTACTGGAAAAATTTAGTTACACTTTCCTTCTATT ATTACACTTTGTAGCGTGGCGTTGTTTTCCAAAAGGTACTTTCCATACAC AGTCAGAATCTGACTGTTTCTAGAAAAATAATTTACATAAAAATTCCAAC TAAACCTTATTTATACACTTTAAATTACCAAAGCACAGTTTCTCATTGTA ACTTTTTGTTGAGATTTGAGATTTTTTTCTACTGTCCAAGAAGATATCTC GCCTCTTCTTGAATTTATGGTTTTCTATGCTCTCTTTCTACTGTTCTGTT AGACCTATTTTTAACGAGCTATGAAATATTTCTTGTAATCTTGTGTGAAA TGAAACACGTTGCTCTAAAAGTTCATCATCAAAGTTCTCATCTCCCCGAA TACACACGTTTTTTATAAGGACATCCAAAATTTCTGAAGCCTTCAGATGT TCTTAATTTTTTGAGTTTTAAGTCTAAAAATGGTCTGAACATGTTCTTAT TTTCGCCATTTTGTGAATAATTTCGTCCATTTTCCTAAGGAATCGGTTGT TTAGAGTCAAGAAAGCCTTGAAATGTTCTTAACTTGTTCTTAATATTTTT GCCATCAGAGGCTCTTGTTCTCATATAGTTTGTTCTTATAAAAAACGTGT AACAAAAGTTCAATTACTACTTTGGTGTAGAAATAGTTTTATTTTCATAA GTCTAGCAAGTTTGAAATAAAGTGAGAATATTGTTCAAGTGGAAATATCG AATTTATTGTAGCTTAGCTTAGCTCTGATTAAGTTTATACTATTTTTAAG CACTTTGAACTTTAGCTTTATTAAGCTACTTAAAATTAGGGAACTAGTTA TTGAAATAAATCAGAAACAGTATTTTTTTCAGAGACATAGTAAATTTGTT GTCGTTTCTTTTGTTGGTGGTAATGTATTATAATAAAGTTTATATCTTTT AAAGAGGGCACTGATTGGTTTATTAGACGAGCAACCATAGTTCGCCCCCC CCCCCCTTTNCTTTTGTTGGTGGTAATGTATTATAATAAAGCTTATATCT TTTAAAGAGGGTACTGATTGGTTTATTAGACGAGCAACCATAGTTCGTCC CCCCTTTCTTAATGACACTTCCTGAACAAATGGAGAAGGGGGGATCAGAA ATTTTTATGAAAAAGGGAGATAGCAAGGAAAGGGGGGGGGTCATTTAAGA TAGGGGGCGGTCAGACCCCTTTCCGCACTATGAGAAACTGCCAAAACAAA CAATAGTGCCTATGAAAACAGAATATTACTACCAAGAATCGAAAGATATC CCAATGGATACCCTGTTCTCATTTAGTATCATTTTCAGACATTATTGGAC AAACAAAAATAAAAAAACTTACAGTAATAAGAATATGAATGCTAGAGTAG AATTTCATACATATAAAATAGATAACATTAGTCGTGTGTGCAAAGATGTG TTGTGAGCTAGAAAGATTTTTGATGACCTAACTTGATATTTGAGTAGATT CGTCTTTTCCTGACTAATTCGCGTGCGTCTTTTATATACTTTATCGAATT TTTCTACATCTCCCGTACAGAGATATCGGTTAATAAAAAAATTGTGTAAG AATTTTAATGGATTTTTATTCTCTTTGACTTTACGCTCTATGTTGTTCCA ATATGTTATCAAATTTTTCAATCTTATAGAAAACGTAGCATGATTGAGTT GATGTTATGAGGTTATGATGACCAGAATTATAATATTTCGTCAGTTTGGA TAATGTGAACGTTGTTTGAGAGCGAGCAGTAATACAATTTTGTTGTAGAA GTTTCTTAACTGATGACCAAAATAATAGAATGATATTCACATCACAAAGT TGACTGCTTTTAATTCTGTTACTTTAATAGGTTTCCTAAATTTCTTTTAC TATCTTAAATATGCAAAACTTTTTGGTCAAAATAATACAAAAGCTTCTGG TCTCAAGAAAATATACTTTACCATCTATTTGAAGGAGCTCTAAGTCCCAA CAAAAAAGTGTATTATAATCATTTTAACCTCTATTAGTGATGTATCGCAG AGCTGCTGCTTCTAATTTTATTTCCCACGTCCCAGTACTTCACCAAACAT TATAACTTTTAAAAATTATGATAGTCAAAAATTTGGAAATTTTATTTTGT TCTTCGTGTTCTTTGTACTCATTTATTTTTTTCCCTTCGTTATTTTTTCT CATCCAATATTGATTTCGGTATTTGCCAATCTTCATTATTCCCCCTTAAT TTCTTCTTTATGTTATAATCTAAGACCTACCACTGGTAGTTCTTATCTTC CTATATTATTCGTAAACAAAGCAATAACCTAACAATACTGTTATCTTTAT CCCTCATACAATGCTAAGATTTAAAATTCTTGAAAATTCAGGTATAGATA AAGGGTTAAAAATAGTTGTTGAAAAATCGACTAAGATATTATAGTAACTA GAAACAGAGATAGAAATGAAGATTTTTCTTCACGTTCTGCAAAAAAAGAA ATAGGCGAGGTAGGGGTTTCAAGTGATTAAAGAAGAGTATTTTTTCGCTT ATTGTTTTTCAACTTGAAATTTTTCCAAAAGAAAATTTGATAGAAACAAG TAGAGTTTAGCAGTATGAAATATTGTTCATGTGAAATTTTTTACGTTTAA CGTTGGAGAATTAAAAGTTTGAAATTAAAATTAAAATTTGAAAATCTCAC TTGTTCAATTTGGAATAGTGGAGAGCAATAAAAGGTGTGAATAAAAAGCT CAACCATCGGTGAACAGAATGTAGTTTTTACGAGTCAAAAATTTATGATA ATAATTCGAATTGGAATAAATTAATGAATAAAGATGACGACCACGAAACG GTACTTACGACGTTTCAGTAGCGTCGATCGTGCGTCCGTTGATCGGGAAC AGGTGAGTCCTAAAGGAAAAGATCTCTCTTTCATCAACGGATTAGAATAG GTGGATTAAGAACTCATAGAAAACACTCCTCGTTAGGTTATCAAACTTTT TTACGAGTTTGCTAGCAATTAAAACTTGATAAGTTGTAANNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAT CTCTCTTGGGAGCAACGAGAGAAGTTAATCCACCTATTCTAATCCGTTGC TTTCATGAAAACTGTCTTAAAGAACAGATTGAGAAAACCCATATTTGTGT ATTCGTGTGTGTTGCTTAGCAGATCCTGTTGGAGAATAATAGACATTTTG TACATTTCGATGCATTGCTCTTAAAGGGAAAAAAATGATCCCTCAAATTT TAAATTAATGAATTTACTTAAGGGTTTAAAACCTTTCAAAAACTTGAAAC TGAAGATGAAAAAAATGGGTTTAAACTAAAATTCATATATTTTTCTGTAA TTTTAAACTTTGCCGCATTCAAACTTTTTACTACCTTTCCTATGGGACAA AATTTACAATCCTCTTGGAAGGTTTGCTCTGGGGTTTTCCCGGGGAGGGG TAATTGTTCTTCCTCATGAGCACATTTTAATCTCACATCAAGTTTAAGTT TTATCTCTTTTCCTGTTAACAGATCGTAAAATTTTAAGTCACTTATAAAA GTCTCAATCTTAATTTTTTTTATCAATTTTCAGGTTCTACCGGAGGAGAA AAGTTGGATGTTAGCTGCTGCCCATGGCAACATCAAGAAGCTCGAAAGTC TCCTCAAAGAATACCCTTCCCTGGCGAAGAAGAAGGATTTCGTTATGGGT TACACCGCCCTCCATTGGGCCGCCAAACTAGGGCGTACCGATATTGTGAA ATTCATTATGGGTGCAAACGTTGATATTCATTCGAAATCGCATGGTGGTT ACACGCCCTTACATATTGCTGCCATGAGTGGGCGGGACCAAGTTATAGTA CAGTTGATTGAACTTTATAGTAAGTGTTATTTTACTTTCACTATATGACG TTCGAAATCTGCCCGGGTAGTTTGATTCTTGGCGTTCGATCGGACGTTTA CCTTGTAGCATCAAAATAATCACCAATAAATTCCTTCGGTTTGACACTTC TTAGACTATTGTGACCTGTTTCAACAACTCATCTTTTTTCAAATTCTTTT TTACAGACGCAAACATTCACACACGTGACCATAGCGGTAAGAAACCACGG GATGTTGTCAAGGATACCGTAGCTGCTGACGTTCAAAGTAAGTCCGCCAT TATGGTGTTCATTTCGAATGTCTCAACAACTTGAAGTAATTCTCTGGTCT TCAGAGGAATACCATAGACTTTTTTTTTTTGCTTATTTATTTATTTTTCC TTTTCTTTTCTTTTCTTTTACATAGTCTAGTACCTCTAGTACCTCTGGCG AAAAAAATCATAGACTATTTTATCGCTCTTTTTATCGAACTCATTACAAG TCAACGATATCAGATTCCTTTTGATCTCCGAGTTATGGATGTTCAATTTA ATGAGAGTTCCATTCTTAGACAAATAAGGTATAAGTTAGGTAAGGAGTCC TTCAGTGGTCCCCATTGAGTTTCAAGCCGAAGGCTAGAGGTCAATCTCCT TGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCGGCCTTGAGC GACCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNAGGTTTTTACACAAATGACAGATTGAAACTAAAATTTACCGCTTAA TTTCGAAAAATATATCACTCGAAAACAAAGGANNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNGATTCAATCCGTCATCAAAAATA CGGCGCATATTTTAAGGCTTCAATTTTTCTTGCCTGAGAAAGGTTAGAGA TTGACCTCTAGCCCTTCGGGCTTGAAACACTCAATGGTGGTCCCACATGC GTTCCAGCTTTCGTTTAGTGTCTAGATGTATGTCGCCTTTTTGGCCCAGC GCTAAGCGAGTGGGCCTTTCATTTGCAACGTTCTGTTCGTTCGTGTGTCC GTCCGTTTTGGTAGAAACGGCGCTTAAAACCAGTATCACACTTTTTGCCG TCTGGATAGGGAAAAGCTTGCTAAAGTCTGATACTGGCTATAAAAGATAT ATTTTCTGATTCCGCGCTCCTTCAAAACAATTTTCAAAACAAACCAAGAT GGCGGTCGAAGCGAGGAGGTTGATTCATACTTTCTTGAACATTTTCTTTG CTTAGTGGTCAAGAGATTTTCAAACCAAAGAAATTTTGTAAAGATTTTCT TTATAAACCTTTTTCAACATTCTTATAGTCTTTGCTCAAGTTTTCATAAA TTTTTATGAGTGAAATTCTACCTTAAATCACTTTCATTTTTTTAGTTTCT TGTATTCAAAAAGACTTTATTTTTAGGAAATAATGGCTTCTGATATAGAA ATAAATAAACTGAAATGCAGCTCATGTGTAAATTTGAATAAGATTTGAAC TTTTTTCTTGATGCTACAGAAGAAAACAGTCACTTCTGGATCTGTCGATG TTAACAACGGTCAGTACAACATACAGTGGTTGGGACGTGGTATGATTTTC AAACTCAACACATAATTATTTCAAGTAAACTAATTCTGGAATTTGGTAAT GGAAACTAAAATGGAGCTCATGTGTAAATTGGAACAAGATTGGAACTTTT TCCGAGATGCTACGCGTGCGTGAAAATTATTTTTTCTGGATCTGTCTCGT TTGGCGAAAGGTGCGGTGGCTTGATTTTTCAAACTCGACACAGAATTATT TCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACA TATGCTGCTTTGTACGCTCGATTTCAACACGTTACTTTTCGCTGGGCCTT CACGCCCAACGGGCTTCTTGTCCTATTTTGATAAAAGTGTCGGTTTATAT TTTCTTATGAAATTTATGATAATTCTTCCTTTTTTTCGTTTTTCAGGAAA ACTGGGACGATCACTTATTCTCGGTATGCGATGATTTTTTCTTTTCCTTT CTTTGCTTTGTTTTTGATCGATTGATTGTTAAGTGAGTTATACATTAAAA TGCACATTGGGCTTTACCAGAAACGAAAGCCGTATGTCAAACATCTTTAA TGTAGGTCCGACCTTTTGTGAGCTACTTCCTTGAATACAACTGAAAAAAA ATGCTTAAAGACTTCCCAAAGTCACCCACGGCACTCGGTGGGAGCAAAAG GTGTGCGTCCAAGGAGGTATACGATTTTATTCCTTTAAAGAAGCTCATGA TTTGACAGGGAAAATCTATATCTTAAATAAAGAAGCCTTCAGGAAGCCTT CTTTTATGCACAGAAAGGATGATCGAAGTAAACTCCTGTGTCAGAAATTT CCATCTAATTTGTAAAGTCAGACTAATAGTCATCTCCTCTAACCACCCTC ATCGTTGTTTTGGTGTATGTCTTTGAATTTATTATTTGATAACGTGACTG AGTAGTTTTTAATGATTTGTATTGTAAAAAACTGAGCTTTAATGTTTGAA TGGAAATTGAACGAATAAATAAATTAGTGAATGGATTAAGTAAAGGGTTT CGACCCAGCGTATTTCAATTCAAGCTTTATTTGGCTAGGAAGTAGTTTTT TTTTTCATTGCTTGTTACTAAATTGATATTTTTACAATTTTTAGCTGTAT TTCACTTATTTTATCTTATCTAGTTTTGTCAATATTTTTAAGCATGACTT TGTAGCTAGAAGTTTTTACAACACGCACACACATACACGCTTTTTGAATA ATTACATCACATACATTTCATCACATCATAACATAACATTTTAATCAATT ATGTCAAGATATCTACCAGAAAATCATTACATTAAACCACAGCTATCCTC AAACCCAGCTCCAGTGTTAAAAAGTAAATTAAAGACACTTTAAATTTTTT GCCAAATTGAAAGAACGACGAGCCTAAACCATGATTGACGATTTCTCTGT TTGCAGCGAAGACAAAAAAGGCTGTAACTTTTATAATATAATTGGAATTA AATAGCGGTTTTATTCGAANCTTTGTACGCTCGATTTCAACACGTTACTT TTCGCTGGGCCTTCACGCCCAACGGGCTTCTTGTCCTATTTTGATAAAAG TGTCGGTTTATATTTTCTTATGAAATTTATGATAATTCTTCCTTTTTTTC GTTTTTCAGGAAAACTGGGACGATCACTTATTCTCGGTATGCGATGATTT TTTCTTTTCCTTTCTTTGCTTTGTTTTTGATCGATTGATTGTTAAGTGAG TTATACATTAAAATGCACATTGGGCTTTACCAGAAACGAAAGCCGTATGT CAAACATCTTTAATGTAGGTCCGACCTTTTGTGAGCTACTTCCTTGAATA CAACTGAAAAAAAATGCTTAAAGACTTCCCAAAGTCACCCACGGCACTTG GTGGGAGCAAAAGGTGTGCGTCCAAGGAGGTATACGATTTTATTCCTTTA AAGAAGCTCATGGTTTGACAGGGAAAATCTATATCTTAAATAAAGAAGCC TTCAGGAAGCCTTCTTTTATGCACAGAAAGGATGCTCGAAGTAAACTCCT GTGTCAGAAATTTCCATCTAATTTGTAAAGTCAGACTAATAGTCATCTCC TCTAACCACCCTCATCGTTGTTTTGGTGTATGTCTTTGAATTTATTATTT GATCACGTGACTGAGTAGTTTTTAATGATTTGTATTGTAAAAAACTGAGC TTTAATGTTTGAATGGAAATTGAACGAATAAATAAATTAGTGAATGGATT AAGTAAAGGGTTTCGACCCAGCGTATTTCAATTCAAGCTTTATTTGGCTA GGAAGTAGTTTTTTTTTTCATTGCTTGTTACTAAATTGATATTTTTACAA TTTTTAGCTGTATTTCACTTATTTTATCTTATCTAGTTTTGTCAATATTT TTAAGCATGACTTTGTAGCTAGAAGTTTTTACAACACGCACACACATACA CGCTTTTTGAATAATTACATCACATACATTTCATCACATCATAACATAAC ATTTTAATCAATTATGTCAAGATATCTACCAGAAAATCATTACATTAAAC CACAGCTATCCTCAAACCCAGCTCCAGTGTTAAAAAGTAAATTAAAGACA CTTTAAATTTTTTGCCAAATTGAAAGAACGACGAGCCTATACCATGATTG ACGATTTCTCTGTTTGCAGCGAAGACAAAAAAGGCTGTAACTTTTATAAT ATAATTGGAATTAAATAGCGGTTTTATTCGAATTCTATCAAAAGTTAATA CACTCTTCTCGAGATGCATAAATTTATTGTTGTCCTCGTTTTCAAACAGA TTTCATTGCTATGAAATTATACATTTAAACCAATTTAAATTCACAAAAGG CAAACATTAACTCTAAAACAAAAGTACTGGAAATTCAAAATGTCTCATGA GGTGTAAACAGCACAATTATCATTGAGAATATGTAATTTTATAGCAATGA AATCTGTTTGAAAACGAGAACAACAATAAATTTATGCATCTCGAGAAGAG TGTATTGAAGCCTCTTTTGACTACCCTAAAAATTCTATTGAGACAGACGT TTTCTTTTGGATATCTTGTCAATTAATGTTTACACACACACACACATACC ATTACATCTTAACACATTGGGCTTTTCCAGAAAAAAAACGTGCACCCCCT GTTGAGGAGGTCCAACCTTTTGTGACCTACCCCCATGGAATTCCGCTTAT TTTTGACGGATTTTCGTGTACCCTTATGGAATTCCACTGCATTTCAAACC TTACGCCCTTGGAACGAAAATGGACCTCCTCAACAGGGGGTGCACGGTTT CTTTCTGGAAAAACCCATTCATAACTCACAATAACCATCACTAATTCACT AATCATTAATTAAAGAAACACACGGAGTTTACTGCACTGACATTTTTTCT ATGCATGATAGAAACCCCCCCCCCCCCCCCCGACACCCTTTTATGCCCCT TTTACAACGCACGATAGCCCCTCATCCCCTTGAACAGAAGCCTTCTAATA TACAGTGGATTGAAATATTTGTCTTAAAATCTGACTGGTTCAAAACCATT TCGCGACTCTCAGAGTTTCATAGATCGCGCACTTTACATGTATCATATGC TTAAAGGGGGATTTCCATTTTATTTATCTCATGGCTTCAAGAACTCACTT CCAGTAATGGGCGTGATAAGCTTTTGCCTTACCAGAAGATTCTAACATCT AACATTCTTTTTAAAGAGGAAATGGTTTTATCCTCTTTAAAGTAAAATAA ACCAGCCGAGGCTGGAAGGTCAGCCAATAGAGATTAGCTAGATAGCTTTA ATAAGTGGGTTAACAGATGTAAGAGATGCACTGAAACAGAGTAGACTAAA TATGTTGAATAATGTACAAAATGTGAAACATTTGATAANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045286XLOC_045286Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073037-exon-scaffold_86-1575043694:857106..857199TCONS_00073037-exon-scaffold_86-1575043694:857106..857199Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1575043694:849331..849616TCONS_00073037-exon-scaffold_86-1575043694:849331..849616Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1575043694:849063..849143TCONS_00073037-exon-scaffold_86-1575043694:849063..849143Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1575043694:844714..844740TCONS_00073037-exon-scaffold_86-1575043694:844714..844740Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1575043694:838387..838795TCONS_00073037-exon-scaffold_86-1575043694:838387..838795Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1510915933:857106..857199TCONS_00073037-exon-scaffold_86-1510915933:857106..857199Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1510915933:849331..849616TCONS_00073037-exon-scaffold_86-1510915933:849331..849616Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1510915933:849063..849143TCONS_00073037-exon-scaffold_86-1510915933:849063..849143Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1510915933:844714..844740TCONS_00073037-exon-scaffold_86-1510915933:844714..844740Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1510915933:838387..838795TCONS_00073037-exon-scaffold_86-1510915933:838387..838795Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1491911889:857106..857199TCONS_00073037-exon-scaffold_86-1491911889:857106..857199Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1491911889:849331..849616TCONS_00073037-exon-scaffold_86-1491911889:849331..849616Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1491911889:849063..849143TCONS_00073037-exon-scaffold_86-1491911889:849063..849143Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1491911889:844714..844740TCONS_00073037-exon-scaffold_86-1491911889:844714..844740Clytia hemisphaericaexon
TCONS_00073037-exon-scaffold_86-1491911889:838387..838795TCONS_00073037-exon-scaffold_86-1491911889:838387..838795Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:838387..857199 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 4.04189e-08 0.00835509 0 0 0 7.12095 0.497064 3.34315 6.58234 0 0.0763663 2.6529e-09 0 1.34556e-07 1.81433 7.13503e-06 0 0 0 0 0 0 0 1.95825 1.25201e-05 0.000157893
Blast
BLAST of TCONS_00073037 vs. Swiss-Prot (Human)
Match: SWAHC (Ankyrin repeat domain-containing protein SOWAHC OS=Homo sapiens GN=SOWAHC PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.509e-24
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 2
Query:  101 PEEKSWMLAAAHGNIKKLESLLKEYPSLAKKKDFVMGYTALHWAAKLGRTDIVKFIMG-AN-----VDIHSKSHGGYTPLHIAAMSGRDQVIVQLIELYNANIHTRDHSGKKPRDVVKDTVAADVQRKLG 472
            P E +WML+A+ G    LE LL   P L  K+DF+ G+T LHWAAK GR +++  ++  AN     V+I +++ GGYT LH+AAM G  +V+  L+  Y+A++  RD+SGKK    +  ++A +++  +G
Sbjct:  266 PLEHAWMLSASDGKWDSLEGLLTCEPGLLVKRDFITGFTCLHWAAKHGRQELLAMLVNFANKHQLPVNIDARTSGGYTALHLAAMHGHVEVVKLLVGAYDADVDIRDYSGKKASQYLSRSIAEEIKNLVG 395          
The following BLAST results are available for this feature:
BLAST of TCONS_00073037 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWAHC9.509e-2440.00Ankyrin repeat domain-containing protein SOWAHC OS... [more]
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