TCONS_00073029 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073029
Unique NameTCONS_00073029
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1252

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073029 ID=TCONS_00073029|Name=TCONS_00073029|organism=Clytia hemisphaerica|type=transcript|length=1252bp
CATGTTTCCTTGTGTTGACTTCTTCTAATATACTCACTGCTGTAAacgga
aatcaaaaaaaactgaaatctaTTTTAACTTTGTTGTACATCGATCTCTC
ATTTTGTCATCCGGTTTTCGATTCGATTTGACCAGTATGGAAACTTTAAC
TCAGCAATCACCCACACATCAAAATCATCACCATGAAACACAGCTCGTTg
TTCTACCGGAGGAGAAAAGTTGGATGTTAGCTGCTGCCCATGGCAACATC
AAGAAGCTCGAAAGTCTCCTCAAAGAATACCCTTCCCTGGCGAAGAAGAA
GGATTTCGTTATGGGTTACACCGCCCTCCATTGGGCCGCCAAACTAGGGC
GTACCGATATTGTGAAATTCATTATGGGTGCAAACGTTGATATTCATTCG
AAATCGCATGGTGGTTACACGCCCTTACATATTGCTGCCATGAGTGGGCG
GGACCAAGTTATAGTACAGTTGATTGAACTTTATAACGCAAACATTCACA
CACGTGACCATAGCGGTAAGAAACCACGGGATGTTGTCAAGGATACCGTA
GCTGCTGACGTTCAAAgaAAACTGGGACGATCACTTATTCTCGAGCCGGA
TTGGATGCTAAAAGACGCCTCAGTAGTACGGAAATCATCCGCCCAGCTAA
CCCATATCACTCTACCGTCGCCAAAATCGGGTGATAGACGCCTTGGGCGG
AACTTCCGCCCTTCTATTAGCACGTAACAAAGAATGTGTTTTCCGACCAC
TGGAAGAGGTGTATCAATCGCGTATCGAATGGAGATGGTTTTTTTGGGCG
ATCGACTTTGAGTTTAAAATGCAGACAACTGAATTTGTTCCTTCGTGTGG
GTTagacttttcaagtttttctggTTTTGAAAGAACCCAGAGTTGCTTAT
TCCTGAGACTCGTCAATACCGTAACTTAGTCTAAtgtccgacacccttct
ttagagaaaggaatagtAGAAAGGTCGGAAACTATATTTTTTACTAAGCG
ACCagagagaaaaaatcttttgtctatcagtgattctgaccttactatta
ttcctatctctaaaactgggtgttggaattagaagAGACAACTTACGGTA
GTATATTCTTGAACGTTGAAACGCAGAAAagttttaattctttaaaaagc
atttttttattaAGTAGtttgattttaacaaaaattcttaaccaaaattt
tacttttatcaaatttagttATATATTTATAGAGTCTAAATTTTTAGACC
CA
Run BLAST on NCBI

transcript from alignment at scaffold_86:836953..854907-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073029 ID=TCONS_00073029|Name=TCONS_00073029|organism=Clytia hemisphaerica|type=transcript|length=17955bp|location=Sequence derived from alignment at scaffold_86:836953..854907- (Clytia hemisphaerica)
CATGTTTCCTTGTGTTGACTTCTTCTAATATACTCACTGCTGTAAACGGA
AATCAAAAAAAACTGAAATCTATTTTAACTTTGTTGTACATCGATCTCTC
ATTTTGTCATCCGGTTTTCGATTCGATTTGACCAGTATGGAAACTTTAAC
TCAGCAATCACCCACACATCAAAATCATCACCATGAAACACAGCTCGTTG
TAAGAAAAGTTTTTCTTATTTATTTTTCATTCGTTCGTTAAGATAATCCT
AACTAGTAGATGTCAAATTTTAACTGACTGTGTACTGTGTTTTGGTTATG
AGTTATCAATTAAGCTGATCACTAGAACATCCTTTAAGAGAGTGATTAGT
CTGTCGAATTTAAAAATTTTACTGGCTATGTAAAAATCAAGGATCTTCTA
GATTGGATAACCATCTTATTCGATTAAAAACGCTAGATACACTTGAACAA
CTTTGTTTGCTATTTGCTGGAAATGTGGGTAAGTGTACTTTAATCTTAAA
ACCTAATTTCAGTGAAATTTAAATGTTTGGGTCTTCTAGATTGGATAACT
GTCATTTAACACTCTTTAATAAAACGTTAGATACACTAAAACAATTTTAA
AGTGGACTTATGGGCAAGTGTACTTAAATCTTAAAACCTAATTTCGGTGA
AATTTAAAATGTTTGTTAAAAAAGTCATTATAGTATTAAATTACAAGATT
GATATGCGATGCATATGATTGCCAATCTCTGGTTTGATAAAAAATTTTAA
GTAATAATTCACTAAATAATTAAGCTGACTAGTCTCTCAAGATTTATACT
TTGAAAAATAATTGAAAAGTTACTTCCTTCTGTGTAGTCAAATGTTATTT
TGACAAAATATTATTTGTACCAACATTGGAAAGATTGATTTTGTATTTAA
CATTGACCTTTAATATCTAATGTGCCTAGAAGTTGATACTTCTTTCGATG
TACTTTTCCATGTCTCTCCTATATGACTCTTTGTGGCTGGATTTTTTTTG
AAGGAAATGAGGACTGAGGTTGGTACTTTATTTAATGTTTTGTTTTACAT
ATACATATAAAAAGTGCTCTTTTATAAACTTGCTATTTACTTTTCATACG
TTGTTACCTAACCTACTGAGTTCTTACTGGAAAAATTTAGTTACACTTTC
CTTCTATTATTACACTTTGTAGCGTGGCGTTGTTTTCCAAAAGGTACTTT
CCATACACAGTCAGAATCTGACTGTTTCTAGAAAAATAATTTACATAAAA
ATTCCAACTAAACCTTATTTATACACTTTAAATTACCAAAGCACAGTTTC
TCATTGTAACTTTTTGTTGAGATTTGAGATTTTTTTCTACTGTCCAAGAA
GATATCTCGCCTCTTCTTGAATTTATGGTTTTCTATGCTCTCTTTCTACT
GTTCTGTTAGACCTATTTTTAACGAGCTATGAAATATTTCTTGTAATCTT
GTGTGAAATGAAACACGTTGCTCTAAAAGTTCATCATCAAAGTTCTCATC
TCCCCGAATACACACGTTTTTTATAAGGACATCCAAAATTTCTGAAGCCT
TCAGATGTTCTTAATTTTTTGAGTTTTAAGTCTAAAAATGGTCTGAACAT
GTTCTTATTTTCGCCATTTTGTGAATAATTTCGTCCATTTTCCTAAGGAA
TCGGTTGTTTAGAGTCAAGAAAGCCTTGAAATGTTCTTAACTTGTTCTTA
ATATTTTTGCCATCAGAGGCTCTTGTTCTCATATAGTTTGTTCTTATAAA
AAACGTGTAACAAAAGTTCAATTACTACTTTGGTGTAGAAATAGTTTTAT
TTTCATAAGTCTAGCAAGTTTGAAATAAAGTGAGAATATTGTTCAAGTGG
AAATATCGAATTTATTGTAGCTTAGCTTAGCTCTGATTAAGTTTATACTA
TTTTTAAGCACTTTGAACTTTAGCTTTATTAAGCTACTTAAAATTAGGGA
ACTAGTTATTGAAATAAATCAGAAACAGTATTTTTTTCAGAGACATAGTA
AATTTGTTGTCGTTTCTTTTGTTGGTGGTAATGTATTATAATAAAGTTTA
TATCTTTTAAAGAGGGCACTGATTGGTTTATTAGACGAGCAACCATAGTT
CGCCCCCCCCCCCCTTTNCTTTTGTTGGTGGTAATGTATTATAATAAAGC
TTATATCTTTTAAAGAGGGTACTGATTGGTTTATTAGACGAGCAACCATA
GTTCGTCCCCCCTTTCTTAATGACACTTCCTGAACAAATGGAGAAGGGGG
GATCAGAAATTTTTATGAAAAAGGGAGATAGCAAGGAAAGGGGGGGGGTC
ATTTAAGATAGGGGGCGGTCAGACCCCTTTCCGCACTATGAGAAACTGCC
AAAACAAACAATAGTGCCTATGAAAACAGAATATTACTACCAAGAATCGA
AAGATATCCCAATGGATACCCTGTTCTCATTTAGTATCATTTTCAGACAT
TATTGGACAAACAAAAATAAAAAAACTTACAGTAATAAGAATATGAATGC
TAGAGTAGAATTTCATACATATAAAATAGATAACATTAGTCGTGTGTGCA
AAGATGTGTTGTGAGCTAGAAAGATTTTTGATGACCTAACTTGATATTTG
AGTAGATTCGTCTTTTCCTGACTAATTCGCGTGCGTCTTTTATATACTTT
ATCGAATTTTTCTACATCTCCCGTACAGAGATATCGGTTAATAAAAAAAT
TGTGTAAGAATTTTAATGGATTTTTATTCTCTTTGACTTTACGCTCTATG
TTGTTCCAATATGTTATCAAATTTTTCAATCTTATAGAAAACGTAGCATG
ATTGAGTTGATGTTATGAGGTTATGATGACCAGAATTATAATATTTCGTC
AGTTTGGATAATGTGAACGTTGTTTGAGAGCGAGCAGTAATACAATTTTG
TTGTAGAAGTTTCTTAACTGATGACCAAAATAATAGAATGATATTCACAT
CACAAAGTTGACTGCTTTTAATTCTGTTACTTTAATAGGTTTCCTAAATT
TCTTTTACTATCTTAAATATGCAAAACTTTTTGGTCAAAATAATACAAAA
GCTTCTGGTCTCAAGAAAATATACTTTACCATCTATTTGAAGGAGCTCTA
AGTCCCAACAAAAAAGTGTATTATAATCATTTTAACCTCTATTAGTGATG
TATCGCAGAGCTGCTGCTTCTAATTTTATTTCCCACGTCCCAGTACTTCA
CCAAACATTATAACTTTTAAAAATTATGATAGTCAAAAATTTGGAAATTT
TATTTTGTTCTTCGTGTTCTTTGTACTCATTTATTTTTTTCCCTTCGTTA
TTTTTTCTCATCCAATATTGATTTCGGTATTTGCCAATCTTCATTATTCC
CCCTTAATTTCTTCTTTATGTTATAATCTAAGACCTACCACTGGTAGTTC
TTATCTTCCTATATTATTCGTAAACAAAGCAATAACCTAACAATACTGTT
ATCTTTATCCCTCATACAATGCTAAGATTTAAAATTCTTGAAAATTCAGG
TATAGATAAAGGGTTAAAAATAGTTGTTGAAAAATCGACTAAGATATTAT
AGTAACTAGAAACAGAGATAGAAATGAAGATTTTTCTTCACGTTCTGCAA
AAAAAGAAATAGGCGAGGTAGGGGTTTCAAGTGATTAAAGAAGAGTATTT
TTTCGCTTATTGTTTTTCAACTTGAAATTTTTCCAAAAGAAAATTTGATA
GAAACAAGTAGAGTTTAGCAGTATGAAATATTGTTCATGTGAAATTTTTT
ACGTTTAACGTTGGAGAATTAAAAGTTTGAAATTAAAATTAAAATTTGAA
AATCTCACTTGTTCAATTTGGAATAGTGGAGAGCAATAAAAGGTGTGAAT
AAAAAGCTCAACCATCGGTGAACAGAATGTAGTTTTTACGAGTCAAAAAT
TTATGATAATAATTCGAATTGGAATAAATTAATGAATAAAGATGACGACC
ACGAAACGGTACTTACGACGTTTCAGTAGCGTCGATCGTGCGTCCGTTGA
TCGGGAACAGGTGAGTCCTAAAGGAAAAGATCTCTCTTTCATCAACGGAT
TAGAATAGGTGGATTAAGAACTCATAGAAAACACTCCTCGTTAGGTTATC
AAACTTTTTTACGAGTTTGCTAGCAATTAAAACTTGATAAGTTGTAANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGATCTCTCTTGGGAGCAACGAGAGAAGTTAATCCACCTATTCTAA
TCCGTTGCTTTCATGAAAACTGTCTTAAAGAACAGATTGAGAAAACCCAT
ATTTGTGTATTCGTGTGTGTTGCTTAGCAGATCCTGTTGGAGAATAATAG
ACATTTTGTACATTTCGATGCATTGCTCTTAAAGGGAAAAAAATGATCCC
TCAAATTTTAAATTAATGAATTTACTTAAGGGTTTAAAACCTTTCAAAAA
CTTGAAACTGAAGATGAAAAAAATGGGTTTAAACTAAAATTCATATATTT
TTCTGTAATTTTAAACTTTGCCGCATTCAAACTTTTTACTACCTTTCCTA
TGGGACAAAATTTACAATCCTCTTGGAAGGTTTGCTCTGGGGTTTTCCCG
GGGAGGGGTAATTGTTCTTCCTCATGAGCACATTTTAATCTCACATCAAG
TTTAAGTTTTATCTCTTTTCCTGTTAACAGATCGTAAAATTTTAAGTCAC
TTATAAAAGTCTCAATCTTAATTTTTTTTATCAATTTTCAGGTTCTACCG
GAGGAGAAAAGTTGGATGTTAGCTGCTGCCCATGGCAACATCAAGAAGCT
CGAAAGTCTCCTCAAAGAATACCCTTCCCTGGCGAAGAAGAAGGATTTCG
TTATGGGTTACACCGCCCTCCATTGGGCCGCCAAACTAGGGCGTACCGAT
ATTGTGAAATTCATTATGGGTGCAAACGTTGATATTCATTCGAAATCGCA
TGGTGGTTACACGCCCTTACATATTGCTGCCATGAGTGGGCGGGACCAAG
TTATAGTACAGTTGATTGAACTTTATAGTAAGTGTTATTTTACTTTCACT
ATATGACGTTCGAAATCTGCCCGGGTAGTTTGATTCTTGGCGTTCGATCG
GACGTTTACCTTGTAGCATCAAAATAATCACCAATAAATTCCTTCGGTTT
GACACTTCTTAGACTATTGTGACCTGTTTCAACAACTCATCTTTTTTCAA
ATTCTTTTTTACAGACGCAAACATTCACACACGTGACCATAGCGGTAAGA
AACCACGGGATGTTGTCAAGGATACCGTAGCTGCTGACGTTCAAAGTAAG
TCCGCCATTATGGTGTTCATTTCGAATGTCTCAACAACTTGAAGTAATTC
TCTGGTCTTCAGAGGAATACCATAGACTTTTTTTTTTTGCTTATTTATTT
ATTTTTCCTTTTCTTTTCTTTTCTTTTACATAGTCTAGTACCTCTAGTAC
CTCTGGCGAAAAAAATCATAGACTATTTTATCGCTCTTTTTATCGAACTC
ATTACAAGTCAACGATATCAGATTCCTTTTGATCTCCGAGTTATGGATGT
TCAATTTAATGAGAGTTCCATTCTTAGACAAATAAGGTATAAGTTAGGTA
AGGAGTCCTTCAGTGGTCCCCATTGAGTTTCAAGCCGAAGGCTAGAGGTC
AATCTCCTTGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCGG
CCTTGAGCGACCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAGGTTTTTACACAAATGACAGATTGAAACTAAAATTTA
CCGCTTAATTTCGAAAAATATATCACTCGAAAACAAAGGANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTCAATCCGTCAT
CAAAAATACGGCGCATATTTTAAGGCTTCAATTTTTCTTGCCTGAGAAAG
GTTAGAGATTGACCTCTAGCCCTTCGGGCTTGAAACACTCAATGGTGGTC
CCACATGCGTTCCAGCTTTCGTTTAGTGTCTAGATGTATGTCGCCTTTTT
GGCCCAGCGCTAAGCGAGTGGGCCTTTCATTTGCAACGTTCTGTTCGTTC
GTGTGTCCGTCCGTTTTGGTAGAAACGGCGCTTAAAACCAGTATCACACT
TTTTGCCGTCTGGATAGGGAAAAGCTTGCTAAAGTCTGATACTGGCTATA
AAAGATATATTTTCTGATTCCGCGCTCCTTCAAAACAATTTTCAAAACAA
ACCAAGATGGCGGTCGAAGCGAGGAGGTTGATTCATACTTTCTTGAACAT
TTTCTTTGCTTAGTGGTCAAGAGATTTTCAAACCAAAGAAATTTTGTAAA
GATTTTCTTTATAAACCTTTTTCAACATTCTTATAGTCTTTGCTCAAGTT
TTCATAAATTTTTATGAGTGAAATTCTACCTTAAATCACTTTCATTTTTT
TAGTTTCTTGTATTCAAAAAGACTTTATTTTTAGGAAATAATGGCTTCTG
ATATAGAAATAAATAAACTGAAATGCAGCTCATGTGTAAATTTGAATAAG
ATTTGAACTTTTTTCTTGATGCTACAGAAGAAAACAGTCACTTCTGGATC
TGTCGATGTTAACAACGGTCAGTACAACATACAGTGGTTGGGACGTGGTA
TGATTTTCAAACTCAACACATAATTATTTCAAGTAAACTAATTCTGGAAT
TTGGTAATGGAAACTAAAATGGAGCTCATGTGTAAATTGGAACAAGATTG
GAACTTTTTCCGAGATGCTACGCGTGCGTGAAAATTATTTTTTCTGGATC
TGTCTCGTTTGGCGAAAGGTGCGGTGGCTTGATTTTTCAAACTCGACACA
GAATTATTTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNCATACATATGCTGCTTTGTACGCTCGATTTCAACACGTTACTTTTCGC
TGGGCCTTCACGCCCAACGGGCTTCTTGTCCTATTTTGATAAAAGTGTCG
GTTTATATTTTCTTATGAAATTTATGATAATTCTTCCTTTTTTTCGTTTT
TCAGGAAAACTGGGACGATCACTTATTCTCGGTATGCGATGATTTTTTCT
TTTCCTTTCTTTGCTTTGTTTTTGATCGATTGATTGTTAAGTGAGTTATA
CATTAAAATGCACATTGGGCTTTACCAGAAACGAAAGCCGTATGTCAAAC
ATCTTTAATGTAGGTCCGACCTTTTGTGAGCTACTTCCTTGAATACAACT
GAAAAAAAATGCTTAAAGACTTCCCAAAGTCACCCACGGCACTCGGTGGG
AGCAAAAGGTGTGCGTCCAAGGAGGTATACGATTTTATTCCTTTAAAGAA
GCTCATGATTTGACAGGGAAAATCTATATCTTAAATAAAGAAGCCTTCAG
GAAGCCTTCTTTTATGCACAGAAAGGATGATCGAAGTAAACTCCTGTGTC
AGAAATTTCCATCTAATTTGTAAAGTCAGACTAATAGTCATCTCCTCTAA
CCACCCTCATCGTTGTTTTGGTGTATGTCTTTGAATTTATTATTTGATAA
CGTGACTGAGTAGTTTTTAATGATTTGTATTGTAAAAAACTGAGCTTTAA
TGTTTGAATGGAAATTGAACGAATAAATAAATTAGTGAATGGATTAAGTA
AAGGGTTTCGACCCAGCGTATTTCAATTCAAGCTTTATTTGGCTAGGAAG
TAGTTTTTTTTTTCATTGCTTGTTACTAAATTGATATTTTTACAATTTTT
AGCTGTATTTCACTTATTTTATCTTATCTAGTTTTGTCAATATTTTTAAG
CATGACTTTGTAGCTAGAAGTTTTTACAACACGCACACACATACACGCTT
TTTGAATAATTACATCACATACATTTCATCACATCATAACATAACATTTT
AATCAATTATGTCAAGATATCTACCAGAAAATCATTACATTAAACCACAG
CTATCCTCAAACCCAGCTCCAGTGTTAAAAAGTAAATTAAAGACACTTTA
AATTTTTTGCCAAATTGAAAGAACGACGAGCCTAAACCATGATTGACGAT
TTCTCTGTTTGCAGCGAAGACAAAAAAGGCTGTAACTTTTATAATATAAT
TGGAATTAAATAGCGGTTTTATTCGAANCTTTGTACGCTCGATTTCAACA
CGTTACTTTTCGCTGGGCCTTCACGCCCAACGGGCTTCTTGTCCTATTTT
GATAAAAGTGTCGGTTTATATTTTCTTATGAAATTTATGATAATTCTTCC
TTTTTTTCGTTTTTCAGGAAAACTGGGACGATCACTTATTCTCGGTATGC
GATGATTTTTTCTTTTCCTTTCTTTGCTTTGTTTTTGATCGATTGATTGT
TAAGTGAGTTATACATTAAAATGCACATTGGGCTTTACCAGAAACGAAAG
CCGTATGTCAAACATCTTTAATGTAGGTCCGACCTTTTGTGAGCTACTTC
CTTGAATACAACTGAAAAAAAATGCTTAAAGACTTCCCAAAGTCACCCAC
GGCACTTGGTGGGAGCAAAAGGTGTGCGTCCAAGGAGGTATACGATTTTA
TTCCTTTAAAGAAGCTCATGGTTTGACAGGGAAAATCTATATCTTAAATA
AAGAAGCCTTCAGGAAGCCTTCTTTTATGCACAGAAAGGATGCTCGAAGT
AAACTCCTGTGTCAGAAATTTCCATCTAATTTGTAAAGTCAGACTAATAG
TCATCTCCTCTAACCACCCTCATCGTTGTTTTGGTGTATGTCTTTGAATT
TATTATTTGATCACGTGACTGAGTAGTTTTTAATGATTTGTATTGTAAAA
AACTGAGCTTTAATGTTTGAATGGAAATTGAACGAATAAATAAATTAGTG
AATGGATTAAGTAAAGGGTTTCGACCCAGCGTATTTCAATTCAAGCTTTA
TTTGGCTAGGAAGTAGTTTTTTTTTTCATTGCTTGTTACTAAATTGATAT
TTTTACAATTTTTAGCTGTATTTCACTTATTTTATCTTATCTAGTTTTGT
CAATATTTTTAAGCATGACTTTGTAGCTAGAAGTTTTTACAACACGCACA
CACATACACGCTTTTTGAATAATTACATCACATACATTTCATCACATCAT
AACATAACATTTTAATCAATTATGTCAAGATATCTACCAGAAAATCATTA
CATTAAACCACAGCTATCCTCAAACCCAGCTCCAGTGTTAAAAAGTAAAT
TAAAGACACTTTAAATTTTTTGCCAAATTGAAAGAACGACGAGCCTATAC
CATGATTGACGATTTCTCTGTTTGCAGCGAAGACAAAAAAGGCTGTAACT
TTTATAATATAATTGGAATTAAATAGCGGTTTTATTCGAATTCTATCAAA
AGTTAATACACTCTTCTCGAGATGCATAAATTTATTGTTGTCCTCGTTTT
CAAACAGATTTCATTGCTATGAAATTATACATTTAAACCAATTTAAATTC
ACAAAAGGCAAACATTAACTCTAAAACAAAAGTACTGGAAATTCAAAATG
TCTCATGAGGTGTAAACAGCACAATTATCATTGAGAATATGTAATTTTAT
AGCAATGAAATCTGTTTGAAAACGAGAACAACAATAAATTTATGCATCTC
GAGAAGAGTGTATTGAAGCCTCTTTTGACTACCCTAAAAATTCTATTGAG
ACAGACGTTTTCTTTTGGATATCTTGTCAATTAATGTTTACACACACACA
CACATACCATTACATCTTAACACATTGGGCTTTTCCAGAAAAAAAACGTG
CACCCCCTGTTGAGGAGGTCCAACCTTTTGTGACCTACCCCCATGGAATT
CCGCTTATTTTTGACGGATTTTCGTGTACCCTTATGGAATTCCACTGCAT
TTCAAACCTTACGCCCTTGGAACGAAAATGGACCTCCTCAACAGGGGGTG
CACGGTTTCTTTCTGGAAAAACCCATTCATAACTCACAATAACCATCACT
AATTCACTAATCATTAATTAAAGAAACACACGGAGTTTACTGCACTGACA
TTTTTTCTATGCATGATAGAAACCCCCCCCCCCCCCCCCGACACCCTTTT
ATGCCCCTTTTACAACGCACGATAGCCCCTCATCCCCTTGAACAGAAGCC
TTCTAATATACAGTGGATTGAAATATTTGTCTTAAAATCTGACTGGTTCA
AAACCATTTCGCGACTCTCAGAGTTTCATAGATCGCGCACTTTACATGTA
TCATATGCTTAAAGGGGGATTTCCATTTTATTTATCTCATGGCTTCAAGA
ACTCACTTCCAGTAATGGGCGTGATAAGCTTTTGCCTTACCAGAAGATTC
TAACATCTAACATTCTTTTTAAAGAGGAAATGGTTTTATCCTCTTTAAAG
TAAAATAAACCAGCCGAGGCTGGAAGGTCAGCCAATAGAGATTAGCTAGA
TAGCTTTAATAAGTGGGTTAACAGATGTAAGAGATGCACTGAAACAGAGT
AGACTAAATATGTTGAATAATGTACAAAATGTGAAACATTTGATAANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNTCACGGAACCAATAGCTGATTGGCTGTA
AGTGACGTAAAATCAGTCAATACGTCACTTTCAACCAATCAGCTGTTGGG
TCCGTGGAAGACATTGCAATGTTGCATATGGTGAATTCATGAATTCGACG
AAAGTTTTCTAAATTTTGATTGATCCACTGTATATTGAAAATTAGTGTTC
CTTTCAAATCACGTTGTCCTCTCTTATATACATGTAATATTTCCCTACAA
ACTTGTACACAGAGCCGGATTGGATGCTAAAAGACGCCTCAGTAGTACGG
AAATCATCCGCCCAGCTAACCCATATCACTCTACCGTCGCCAAAATCGGG
TGATAGACGCCTTGGGCGGAACTTCCGCCCTTCTATTAGCACGTAACAAA
GAATGTGTTTTCCGACCACTGGAAGAGGTGTATCAATCGCGTATCGAATG
GAGATGGTTTTTTTGGGCGATCGACTTTGAGTTTAAAATGCAGACAACTG
AATTTGTTCCTTCGTGTGGGTTAGACTTTTCAAGTTTTTCTGGTTTTGAA
AGAACCCAGAGTTGCTTATTCCTGAGACTCGTCAATACCGTAACTTAGTC
TAATGTCCGACACCCTTCTTTAGAGAAAGGAATAGTAGAAAGGTCGGAAA
CTATATTTTTTACTAAGCGACCAGAGAGAAAAAATCTTTTGTCTATCAGT
GATTCTGACCTTACTATTATTCCTATCTCTAAAACTGGGTGTTGGAATTA
GAAGANTAAGTGACAAAAATTGAAGCTTGCAACAGATTTACACTGGAAAT
ACTTTGGTACAACACTGACTTATCACATCTGACTATCGCTTGAGCCGCCA
TCTTGAAANTGAAGTAGAGAGCCGCATGCTAATGGAGAGTAAACCGAAAA
CACCAGTTTATCCACGGTTTCTCAATTTTAAAATTCGGTTCAGTCCACAC
GAATTCCCTTTCAACAAGACGTATAGCTGCTTCTTAACAGAAAAATATTT
TCGACTGACCGGCCGAACGACTCCCACTTTTNAAAGTTAACCCGATCGGA
AGAAAGTTTAGAAATAAAAGTGAGATCGGAAAATCGGATTTTTTTTTTGT
CGTCTTATGGAACTGAATTTCACCTATTTGAATGCTCAGCTTAGGCTGAC
CAAATATTGCATGTCTGATTTCTTGACAATTCATGATATGTACCATTGCA
ATGTCTTCACGGAACCAATAGCTGATTGGCTGTAAGTGACGTAAAATCAG
TCAATACGTCACTTTCAACCAATCAGCTGTTGGGTCCGTGGAAGACATTG
CAATGTTGCATATGGTGAATTCATGAATTCGACGAAAGTTTTCTAAATTT
TGATTGATCCACTGTATATTGAAAATTAGTGTTCCTTTCAAATCACGTTG
TCCTCTCTTATATACATGTAATATTTCCCTACAAACTTGTACACAGAGCC
GGATTGGATGCTAAAAGACGCCTCAGTAGTACGGAAATCATCCGCCCAGC
TAACCCATATCACTCTACCGTCGCCAAAATCGGGTGATAGACGCCTTGGG
CGGAACTTCCGCCCTTCTATTAGCACGTAACAAAGAATGTGTTTTCCGAC
CACTGGAAGAGGTGTATCAATCGCGTATCGAATGGAGATGGTTTTTTTGG
GCGATCGACTTTGAGTTTAAAATGCAGACAACTGAATTTGTTCCTTCGTG
TGGGTTAGACTTTTCAAGTTTTTCTGGTTTTGAAAGAACCCAGAGTTGCT
TATTCCTGAGACTCGTCAATACCGTAACTTAGTCTAATGTCCGACACCCT
TCTTTAGAGAAAGGAATAGTAGAAAGGTCGGAAACTATATTTTTTACTAA
GCGACCAGAGAGAAAAAATCTTTTGTCTATCAGTGATTCTGACCTTACTA
TTATTCCTATCTCTAAAACTGGGTGTTGGAATTAGAAGAGACAACTTACG
GTAGTATATTCTTGAACGTTGAAACGCAGAAAAGTTTTAATTCTTTAAAA
AGCATTTTTTTATTAAGTAGTTTGATTTTAACAAAAATTCTTAACCAAAA
TTTTACTTTTATCAAATTTAGTTATATATTTATAGAGTCTAAATTTTTAG
ACCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045286XLOC_045286Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073029-exon-scaffold_86-1575043694:854709..854907TCONS_00073029-exon-scaffold_86-1575043694:854709..854907Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1575043694:849331..849616TCONS_00073029-exon-scaffold_86-1575043694:849331..849616Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1575043694:849063..849143TCONS_00073029-exon-scaffold_86-1575043694:849063..849143Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1575043694:844714..844740TCONS_00073029-exon-scaffold_86-1575043694:844714..844740Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1575043694:836953..837611TCONS_00073029-exon-scaffold_86-1575043694:836953..837611Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1510915933:854709..854907TCONS_00073029-exon-scaffold_86-1510915933:854709..854907Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1510915933:849331..849616TCONS_00073029-exon-scaffold_86-1510915933:849331..849616Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1510915933:849063..849143TCONS_00073029-exon-scaffold_86-1510915933:849063..849143Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1510915933:844714..844740TCONS_00073029-exon-scaffold_86-1510915933:844714..844740Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1510915933:836953..837611TCONS_00073029-exon-scaffold_86-1510915933:836953..837611Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1491911889:854709..854907TCONS_00073029-exon-scaffold_86-1491911889:854709..854907Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1491911889:849331..849616TCONS_00073029-exon-scaffold_86-1491911889:849331..849616Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1491911889:849063..849143TCONS_00073029-exon-scaffold_86-1491911889:849063..849143Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1491911889:844714..844740TCONS_00073029-exon-scaffold_86-1491911889:844714..844740Clytia hemisphaericaexon
TCONS_00073029-exon-scaffold_86-1491911889:836953..837611TCONS_00073029-exon-scaffold_86-1491911889:836953..837611Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:836953..854907 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	24.2032	18.2878	13.9679	13.1253	6.89913	5.62864	2.4912	2.05011	7.60269	8.72366	5.97282	6.20045	2.77662	4.34603	7.90438	9.46506	3.29313	5.72732	0	2.09546	3.97352	3.8912	0.730601	0	0	0.411758
Blast
[Close]
BLAST of TCONS_00073029 vs. Swiss-Prot (Human)
Match: SWAHC (Ankyrin repeat domain-containing protein SOWAHC OS=Homo sapiens GN=SOWAHC PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.568e-23
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:  206 PEEKSWMLAAAHGNIKKLESLLKEYPSLAKKKDFVMGYTALHWAAKLGRTDIVKFIMG-AN-----VDIHSKSHGGYTPLHIAAMSGRDQVIVQLIELYNANIHTRDHSGKKPRDVVKDTVAADVQRKLG 577
            P E +WML+A+ G    LE LL   P L  K+DF+ G+T LHWAAK GR +++  ++  AN     V+I +++ GGYT LH+AAM G  +V+  L+  Y+A++  RD+SGKK    +  ++A +++  +G
Sbjct:  266 PLEHAWMLSASDGKWDSLEGLLTCEPGLLVKRDFITGFTCLHWAAKHGRQELLAMLVNFANKHQLPVNIDARTSGGYTALHLAAMHGHVEVVKLLVGAYDADVDIRDYSGKKASQYLSRSIAEEIKNLVG 395
The following BLAST results are available for this feature:
BLAST of TCONS_00073029 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWAHC7.568e-2340.00Ankyrin repeat domain-containing protein SOWAHC OS... [more]
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