TCONS_00073028 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073028
Unique NameTCONS_00073028
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1308

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073028 ID=TCONS_00073028|Name=TCONS_00073028|organism=Clytia hemisphaerica|type=transcript|length=1308bp
TAACGTTGGAGaattaaaagtttgaaattaaaattaaaatttgaaaatct
caCTTGTTCAATTTGGAATAGTGGAGAGCAATAAAAGGTGTGAATAAAAA
GCTCAACCATCGGTGAACAGAATGTAGTTTTTACGAGTCAAAAATTTATG
ATAATAATTCGAATTGGAATAAATTAATGAATAAAGATGACGACCACGAA
ACGGTACTTACGACGTTTCAGTAGCGTCGATCGTGCGTCCGTTGATCGGG
AACAGgTTCTACCGGAGGAGAAAAGTTGGATGTTAGCTGCTGCCCATGGC
AACATCAAGAAGCTCGAAAGTCTCCTCAAAGAATACCCTTCCCTGGCGAA
GAAGAAGGATTTCGTTATGGGTTACACCGCCCTCCATTGGGCCGCCAAAC
TAGGGCGTACCGATATTGTGAAATTCATTATGGGTGCAAACGTTGATATT
CATTCGAAATCGCATGGTGGTTACACGCCCTTACATATTGCTGCCATGAG
TGGGCGGGACCAAGTTATAGTACAGTTGATTGAACTTTATAACGCAAACA
TTCACACACGTGACCATAGCGGTAAGAAACCACGGGATGTTGTCAAGGAT
ACCGTAGCTGCTGACGTTCAAAgaAAACTGGGACGATCACTTATTCTCGA
GCCGGATTGGATGCTAAAAGACGCCTCAGTAGTACGGAAATCATCCGCCC
AGCTAACCCATATCACTCTACCGTCGCCAAAATCGGGTGATAGACGCCTT
GGGCGGAACTTCCGCCCTTCTATTAGCACGTAACAAAGAATGTGTTTTCC
GACCACTGGAAGAGGTGTATCAATCGCGTATCGAATGGAGATGGTTTTTT
TGGGCGATCGACTTTGAGTTTAAAATGCAGACAACTGAATTTGTTCCTTC
GTGTGGGTTagacttttcaagtttttctggTTTTGAAAGAACCCAGAGTT
GCTTATTCCTGAGACTCGTCAATACCGTAACTTAGTCTAAtgtccgacac
ccttctttagagaaaggaatagtAGAAAGGTCGGAAACTATATTTTTTAC
TAAGCGACCagagagaaaaaatcttttgtctatcagtgattctgacctta
ctattattcctatctctaaaactgggtgttggaattagaagAGACAACTT
ACGGTAGTATATTCTTGAACGTTGAAACGCAGAAAagttttaattcttta
aaaagcatttttttattaAGTAGtttgattttaacaaaaattcttaacca
aaattttacttttatcaaatttagttATATATTTATAGAGTCTAAATTTT
TAGACCCA
Run BLAST on NCBI

transcript from alignment at scaffold_86:836953..851152-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073028 ID=TCONS_00073028|Name=TCONS_00073028|organism=Clytia hemisphaerica|type=transcript|length=14200bp|location=Sequence derived from alignment at scaffold_86:836953..851152- (Clytia hemisphaerica)
TAACGTTGGAGAATTAAAAGTTTGAAATTAAAATTAAAATTTGAAAATCT
CACTTGTTCAATTTGGAATAGTGGAGAGCAATAAAAGGTGTGAATAAAAA
GCTCAACCATCGGTGAACAGAATGTAGTTTTTACGAGTCAAAAATTTATG
ATAATAATTCGAATTGGAATAAATTAATGAATAAAGATGACGACCACGAA
ACGGTACTTACGACGTTTCAGTAGCGTCGATCGTGCGTCCGTTGATCGGG
AACAGGTGAGTCCTAAAGGAAAAGATCTCTCTTTCATCAACGGATTAGAA
TAGGTGGATTAAGAACTCATAGAAAACACTCCTCGTTAGGTTATCAAACT
TTTTTACGAGTTTGCTAGCAATTAAAACTTGATAAGTTGTAANNNNNNNN
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GATCTCTCTTGGGAGCAACGAGAGAAGTTAATCCACCTATTCTAATCCGT
TGCTTTCATGAAAACTGTCTTAAAGAACAGATTGAGAAAACCCATATTTG
TGTATTCGTGTGTGTTGCTTAGCAGATCCTGTTGGAGAATAATAGACATT
TTGTACATTTCGATGCATTGCTCTTAAAGGGAAAAAAATGATCCCTCAAA
TTTTAAATTAATGAATTTACTTAAGGGTTTAAAACCTTTCAAAAACTTGA
AACTGAAGATGAAAAAAATGGGTTTAAACTAAAATTCATATATTTTTCTG
TAATTTTAAACTTTGCCGCATTCAAACTTTTTACTACCTTTCCTATGGGA
CAAAATTTACAATCCTCTTGGAAGGTTTGCTCTGGGGTTTTCCCGGGGAG
GGGTAATTGTTCTTCCTCATGAGCACATTTTAATCTCACATCAAGTTTAA
GTTTTATCTCTTTTCCTGTTAACAGATCGTAAAATTTTAAGTCACTTATA
AAAGTCTCAATCTTAATTTTTTTTATCAATTTTCAGGTTCTACCGGAGGA
GAAAAGTTGGATGTTAGCTGCTGCCCATGGCAACATCAAGAAGCTCGAAA
GTCTCCTCAAAGAATACCCTTCCCTGGCGAAGAAGAAGGATTTCGTTATG
GGTTACACCGCCCTCCATTGGGCCGCCAAACTAGGGCGTACCGATATTGT
GAAATTCATTATGGGTGCAAACGTTGATATTCATTCGAAATCGCATGGTG
GTTACACGCCCTTACATATTGCTGCCATGAGTGGGCGGGACCAAGTTATA
GTACAGTTGATTGAACTTTATAGTAAGTGTTATTTTACTTTCACTATATG
ACGTTCGAAATCTGCCCGGGTAGTTTGATTCTTGGCGTTCGATCGGACGT
TTACCTTGTAGCATCAAAATAATCACCAATAAATTCCTTCGGTTTGACAC
TTCTTAGACTATTGTGACCTGTTTCAACAACTCATCTTTTTTCAAATTCT
TTTTTACAGACGCAAACATTCACACACGTGACCATAGCGGTAAGAAACCA
CGGGATGTTGTCAAGGATACCGTAGCTGCTGACGTTCAAAGTAAGTCCGC
CATTATGGTGTTCATTTCGAATGTCTCAACAACTTGAAGTAATTCTCTGG
TCTTCAGAGGAATACCATAGACTTTTTTTTTTTGCTTATTTATTTATTTT
TCCTTTTCTTTTCTTTTCTTTTACATAGTCTAGTACCTCTAGTACCTCTG
GCGAAAAAAATCATAGACTATTTTATCGCTCTTTTTATCGAACTCATTAC
AAGTCAACGATATCAGATTCCTTTTGATCTCCGAGTTATGGATGTTCAAT
TTAATGAGAGTTCCATTCTTAGACAAATAAGGTATAAGTTAGGTAAGGAG
TCCTTCAGTGGTCCCCATTGAGTTTCAAGCCGAAGGCTAGAGGTCAATCT
CCTTGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCGGCCTTG
AGCGACCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAGGTTTTTACACAAATGACAGATTGAAACTAAAATTTACCGCT
TAATTTCGAAAAATATATCACTCGAAAACAAAGGANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTCAATCCGTCATCAAAA
ATACGGCGCATATTTTAAGGCTTCAATTTTTCTTGCCTGAGAAAGGTTAG
AGATTGACCTCTAGCCCTTCGGGCTTGAAACACTCAATGGTGGTCCCACA
TGCGTTCCAGCTTTCGTTTAGTGTCTAGATGTATGTCGCCTTTTTGGCCC
AGCGCTAAGCGAGTGGGCCTTTCATTTGCAACGTTCTGTTCGTTCGTGTG
TCCGTCCGTTTTGGTAGAAACGGCGCTTAAAACCAGTATCACACTTTTTG
CCGTCTGGATAGGGAAAAGCTTGCTAAAGTCTGATACTGGCTATAAAAGA
TATATTTTCTGATTCCGCGCTCCTTCAAAACAATTTTCAAAACAAACCAA
GATGGCGGTCGAAGCGAGGAGGTTGATTCATACTTTCTTGAACATTTTCT
TTGCTTAGTGGTCAAGAGATTTTCAAACCAAAGAAATTTTGTAAAGATTT
TCTTTATAAACCTTTTTCAACATTCTTATAGTCTTTGCTCAAGTTTTCAT
AAATTTTTATGAGTGAAATTCTACCTTAAATCACTTTCATTTTTTTAGTT
TCTTGTATTCAAAAAGACTTTATTTTTAGGAAATAATGGCTTCTGATATA
GAAATAAATAAACTGAAATGCAGCTCATGTGTAAATTTGAATAAGATTTG
AACTTTTTTCTTGATGCTACAGAAGAAAACAGTCACTTCTGGATCTGTCG
ATGTTAACAACGGTCAGTACAACATACAGTGGTTGGGACGTGGTATGATT
TTCAAACTCAACACATAATTATTTCAAGTAAACTAATTCTGGAATTTGGT
AATGGAAACTAAAATGGAGCTCATGTGTAAATTGGAACAAGATTGGAACT
TTTTCCGAGATGCTACGCGTGCGTGAAAATTATTTTTTCTGGATCTGTCT
CGTTTGGCGAAAGGTGCGGTGGCTTGATTTTTCAAACTCGACACAGAATT
ATTTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAT
ACATATGCTGCTTTGTACGCTCGATTTCAACACGTTACTTTTCGCTGGGC
CTTCACGCCCAACGGGCTTCTTGTCCTATTTTGATAAAAGTGTCGGTTTA
TATTTTCTTATGAAATTTATGATAATTCTTCCTTTTTTTCGTTTTTCAGG
AAAACTGGGACGATCACTTATTCTCGGTATGCGATGATTTTTTCTTTTCC
TTTCTTTGCTTTGTTTTTGATCGATTGATTGTTAAGTGAGTTATACATTA
AAATGCACATTGGGCTTTACCAGAAACGAAAGCCGTATGTCAAACATCTT
TAATGTAGGTCCGACCTTTTGTGAGCTACTTCCTTGAATACAACTGAAAA
AAAATGCTTAAAGACTTCCCAAAGTCACCCACGGCACTCGGTGGGAGCAA
AAGGTGTGCGTCCAAGGAGGTATACGATTTTATTCCTTTAAAGAAGCTCA
TGATTTGACAGGGAAAATCTATATCTTAAATAAAGAAGCCTTCAGGAAGC
CTTCTTTTATGCACAGAAAGGATGATCGAAGTAAACTCCTGTGTCAGAAA
TTTCCATCTAATTTGTAAAGTCAGACTAATAGTCATCTCCTCTAACCACC
CTCATCGTTGTTTTGGTGTATGTCTTTGAATTTATTATTTGATAACGTGA
CTGAGTAGTTTTTAATGATTTGTATTGTAAAAAACTGAGCTTTAATGTTT
GAATGGAAATTGAACGAATAAATAAATTAGTGAATGGATTAAGTAAAGGG
TTTCGACCCAGCGTATTTCAATTCAAGCTTTATTTGGCTAGGAAGTAGTT
TTTTTTTTCATTGCTTGTTACTAAATTGATATTTTTACAATTTTTAGCTG
TATTTCACTTATTTTATCTTATCTAGTTTTGTCAATATTTTTAAGCATGA
CTTTGTAGCTAGAAGTTTTTACAACACGCACACACATACACGCTTTTTGA
ATAATTACATCACATACATTTCATCACATCATAACATAACATTTTAATCA
ATTATGTCAAGATATCTACCAGAAAATCATTACATTAAACCACAGCTATC
CTCAAACCCAGCTCCAGTGTTAAAAAGTAAATTAAAGACACTTTAAATTT
TTTGCCAAATTGAAAGAACGACGAGCCTAAACCATGATTGACGATTTCTC
TGTTTGCAGCGAAGACAAAAAAGGCTGTAACTTTTATAATATAATTGGAA
TTAAATAGCGGTTTTATTCGAANCTTTGTACGCTCGATTTCAACACGTTA
CTTTTCGCTGGGCCTTCACGCCCAACGGGCTTCTTGTCCTATTTTGATAA
AAGTGTCGGTTTATATTTTCTTATGAAATTTATGATAATTCTTCCTTTTT
TTCGTTTTTCAGGAAAACTGGGACGATCACTTATTCTCGGTATGCGATGA
TTTTTTCTTTTCCTTTCTTTGCTTTGTTTTTGATCGATTGATTGTTAAGT
GAGTTATACATTAAAATGCACATTGGGCTTTACCAGAAACGAAAGCCGTA
TGTCAAACATCTTTAATGTAGGTCCGACCTTTTGTGAGCTACTTCCTTGA
ATACAACTGAAAAAAAATGCTTAAAGACTTCCCAAAGTCACCCACGGCAC
TTGGTGGGAGCAAAAGGTGTGCGTCCAAGGAGGTATACGATTTTATTCCT
TTAAAGAAGCTCATGGTTTGACAGGGAAAATCTATATCTTAAATAAAGAA
GCCTTCAGGAAGCCTTCTTTTATGCACAGAAAGGATGCTCGAAGTAAACT
CCTGTGTCAGAAATTTCCATCTAATTTGTAAAGTCAGACTAATAGTCATC
TCCTCTAACCACCCTCATCGTTGTTTTGGTGTATGTCTTTGAATTTATTA
TTTGATCACGTGACTGAGTAGTTTTTAATGATTTGTATTGTAAAAAACTG
AGCTTTAATGTTTGAATGGAAATTGAACGAATAAATAAATTAGTGAATGG
ATTAAGTAAAGGGTTTCGACCCAGCGTATTTCAATTCAAGCTTTATTTGG
CTAGGAAGTAGTTTTTTTTTTCATTGCTTGTTACTAAATTGATATTTTTA
CAATTTTTAGCTGTATTTCACTTATTTTATCTTATCTAGTTTTGTCAATA
TTTTTAAGCATGACTTTGTAGCTAGAAGTTTTTACAACACGCACACACAT
ACACGCTTTTTGAATAATTACATCACATACATTTCATCACATCATAACAT
AACATTTTAATCAATTATGTCAAGATATCTACCAGAAAATCATTACATTA
AACCACAGCTATCCTCAAACCCAGCTCCAGTGTTAAAAAGTAAATTAAAG
ACACTTTAAATTTTTTGCCAAATTGAAAGAACGACGAGCCTATACCATGA
TTGACGATTTCTCTGTTTGCAGCGAAGACAAAAAAGGCTGTAACTTTTAT
AATATAATTGGAATTAAATAGCGGTTTTATTCGAATTCTATCAAAAGTTA
ATACACTCTTCTCGAGATGCATAAATTTATTGTTGTCCTCGTTTTCAAAC
AGATTTCATTGCTATGAAATTATACATTTAAACCAATTTAAATTCACAAA
AGGCAAACATTAACTCTAAAACAAAAGTACTGGAAATTCAAAATGTCTCA
TGAGGTGTAAACAGCACAATTATCATTGAGAATATGTAATTTTATAGCAA
TGAAATCTGTTTGAAAACGAGAACAACAATAAATTTATGCATCTCGAGAA
GAGTGTATTGAAGCCTCTTTTGACTACCCTAAAAATTCTATTGAGACAGA
CGTTTTCTTTTGGATATCTTGTCAATTAATGTTTACACACACACACACAT
ACCATTACATCTTAACACATTGGGCTTTTCCAGAAAAAAAACGTGCACCC
CCTGTTGAGGAGGTCCAACCTTTTGTGACCTACCCCCATGGAATTCCGCT
TATTTTTGACGGATTTTCGTGTACCCTTATGGAATTCCACTGCATTTCAA
ACCTTACGCCCTTGGAACGAAAATGGACCTCCTCAACAGGGGGTGCACGG
TTTCTTTCTGGAAAAACCCATTCATAACTCACAATAACCATCACTAATTC
ACTAATCATTAATTAAAGAAACACACGGAGTTTACTGCACTGACATTTTT
TCTATGCATGATAGAAACCCCCCCCCCCCCCCCCGACACCCTTTTATGCC
CCTTTTACAACGCACGATAGCCCCTCATCCCCTTGAACAGAAGCCTTCTA
ATATACAGTGGATTGAAATATTTGTCTTAAAATCTGACTGGTTCAAAACC
ATTTCGCGACTCTCAGAGTTTCATAGATCGCGCACTTTACATGTATCATA
TGCTTAAAGGGGGATTTCCATTTTATTTATCTCATGGCTTCAAGAACTCA
CTTCCAGTAATGGGCGTGATAAGCTTTTGCCTTACCAGAAGATTCTAACA
TCTAACATTCTTTTTAAAGAGGAAATGGTTTTATCCTCTTTAAAGTAAAA
TAAACCAGCCGAGGCTGGAAGGTCAGCCAATAGAGATTAGCTAGATAGCT
TTAATAAGTGGGTTAACAGATGTAAGAGATGCACTGAAACAGAGTAGACT
AAATATGTTGAATAATGTACAAAATGTGAAACATTTGATAANNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTCACGGAACCAATAGCTGATTGGCTGTAAGTGA
CGTAAAATCAGTCAATACGTCACTTTCAACCAATCAGCTGTTGGGTCCGT
GGAAGACATTGCAATGTTGCATATGGTGAATTCATGAATTCGACGAAAGT
TTTCTAAATTTTGATTGATCCACTGTATATTGAAAATTAGTGTTCCTTTC
AAATCACGTTGTCCTCTCTTATATACATGTAATATTTCCCTACAAACTTG
TACACAGAGCCGGATTGGATGCTAAAAGACGCCTCAGTAGTACGGAAATC
ATCCGCCCAGCTAACCCATATCACTCTACCGTCGCCAAAATCGGGTGATA
GACGCCTTGGGCGGAACTTCCGCCCTTCTATTAGCACGTAACAAAGAATG
TGTTTTCCGACCACTGGAAGAGGTGTATCAATCGCGTATCGAATGGAGAT
GGTTTTTTTGGGCGATCGACTTTGAGTTTAAAATGCAGACAACTGAATTT
GTTCCTTCGTGTGGGTTAGACTTTTCAAGTTTTTCTGGTTTTGAAAGAAC
CCAGAGTTGCTTATTCCTGAGACTCGTCAATACCGTAACTTAGTCTAATG
TCCGACACCCTTCTTTAGAGAAAGGAATAGTAGAAAGGTCGGAAACTATA
TTTTTTACTAAGCGACCAGAGAGAAAAAATCTTTTGTCTATCAGTGATTC
TGACCTTACTATTATTCCTATCTCTAAAACTGGGTGTTGGAATTAGAAGA
NTAAGTGACAAAAATTGAAGCTTGCAACAGATTTACACTGGAAATACTTT
GGTACAACACTGACTTATCACATCTGACTATCGCTTGAGCCGCCATCTTG
AAANTGAAGTAGAGAGCCGCATGCTAATGGAGAGTAAACCGAAAACACCA
GTTTATCCACGGTTTCTCAATTTTAAAATTCGGTTCAGTCCACACGAATT
CCCTTTCAACAAGACGTATAGCTGCTTCTTAACAGAAAAATATTTTCGAC
TGACCGGCCGAACGACTCCCACTTTTNAAAGTTAACCCGATCGGAAGAAA
GTTTAGAAATAAAAGTGAGATCGGAAAATCGGATTTTTTTTTTGTCGTCT
TATGGAACTGAATTTCACCTATTTGAATGCTCAGCTTAGGCTGACCAAAT
ATTGCATGTCTGATTTCTTGACAATTCATGATATGTACCATTGCAATGTC
TTCACGGAACCAATAGCTGATTGGCTGTAAGTGACGTAAAATCAGTCAAT
ACGTCACTTTCAACCAATCAGCTGTTGGGTCCGTGGAAGACATTGCAATG
TTGCATATGGTGAATTCATGAATTCGACGAAAGTTTTCTAAATTTTGATT
GATCCACTGTATATTGAAAATTAGTGTTCCTTTCAAATCACGTTGTCCTC
TCTTATATACATGTAATATTTCCCTACAAACTTGTACACAGAGCCGGATT
GGATGCTAAAAGACGCCTCAGTAGTACGGAAATCATCCGCCCAGCTAACC
CATATCACTCTACCGTCGCCAAAATCGGGTGATAGACGCCTTGGGCGGAA
CTTCCGCCCTTCTATTAGCACGTAACAAAGAATGTGTTTTCCGACCACTG
GAAGAGGTGTATCAATCGCGTATCGAATGGAGATGGTTTTTTTGGGCGAT
CGACTTTGAGTTTAAAATGCAGACAACTGAATTTGTTCCTTCGTGTGGGT
TAGACTTTTCAAGTTTTTCTGGTTTTGAAAGAACCCAGAGTTGCTTATTC
CTGAGACTCGTCAATACCGTAACTTAGTCTAATGTCCGACACCCTTCTTT
AGAGAAAGGAATAGTAGAAAGGTCGGAAACTATATTTTTTACTAAGCGAC
CAGAGAGAAAAAATCTTTTGTCTATCAGTGATTCTGACCTTACTATTATT
CCTATCTCTAAAACTGGGTGTTGGAATTAGAAGAGACAACTTACGGTAGT
ATATTCTTGAACGTTGAAACGCAGAAAAGTTTTAATTCTTTAAAAAGCAT
TTTTTTATTAAGTAGTTTGATTTTAACAAAAATTCTTAACCAAAATTTTA
CTTTTATCAAATTTAGTTATATATTTATAGAGTCTAAATTTTTAGACCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045286XLOC_045286Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073028-exon-scaffold_86-1575043694:850898..851152TCONS_00073028-exon-scaffold_86-1575043694:850898..851152Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1575043694:849331..849616TCONS_00073028-exon-scaffold_86-1575043694:849331..849616Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1575043694:849063..849143TCONS_00073028-exon-scaffold_86-1575043694:849063..849143Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1575043694:844714..844740TCONS_00073028-exon-scaffold_86-1575043694:844714..844740Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1575043694:836953..837611TCONS_00073028-exon-scaffold_86-1575043694:836953..837611Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1510915933:850898..851152TCONS_00073028-exon-scaffold_86-1510915933:850898..851152Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1510915933:849331..849616TCONS_00073028-exon-scaffold_86-1510915933:849331..849616Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1510915933:849063..849143TCONS_00073028-exon-scaffold_86-1510915933:849063..849143Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1510915933:844714..844740TCONS_00073028-exon-scaffold_86-1510915933:844714..844740Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1510915933:836953..837611TCONS_00073028-exon-scaffold_86-1510915933:836953..837611Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1491911889:850898..851152TCONS_00073028-exon-scaffold_86-1491911889:850898..851152Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1491911889:849331..849616TCONS_00073028-exon-scaffold_86-1491911889:849331..849616Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1491911889:849063..849143TCONS_00073028-exon-scaffold_86-1491911889:849063..849143Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1491911889:844714..844740TCONS_00073028-exon-scaffold_86-1491911889:844714..844740Clytia hemisphaericaexon
TCONS_00073028-exon-scaffold_86-1491911889:836953..837611TCONS_00073028-exon-scaffold_86-1491911889:836953..837611Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:836953..851152 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	1.69035e-09	1.54515e-05	1.74774e-09	0	1.39929e-07	0.000191057	6.27084e-09	0	3.98354e-07	2.97186e-07	0.211509	0	0	0	2.70676	2.14172	0.000377626	0	0.646812	4.0923	0.859066	2.28208	0	0	1.01786	3.56424	0.614131	0.232292
Blast
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BLAST of TCONS_00073028 vs. Swiss-Prot (Human)
Match: SWAHC (Ankyrin repeat domain-containing protein SOWAHC OS=Homo sapiens GN=SOWAHC PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.476e-23
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 1 
Query:  262 PEEKSWMLAAAHGNIKKLESLLKEYPSLAKKKDFVMGYTALHWAAKLGRTDIVKFIMG-AN-----VDIHSKSHGGYTPLHIAAMSGRDQVIVQLIELYNANIHTRDHSGKKPRDVVKDTVAADVQRKLG 633
            P E +WML+A+ G    LE LL   P L  K+DF+ G+T LHWAAK GR +++  ++  AN     V+I +++ GGYT LH+AAM G  +V+  L+  Y+A++  RD+SGKK    +  ++A +++  +G
Sbjct:  266 PLEHAWMLSASDGKWDSLEGLLTCEPGLLVKRDFITGFTCLHWAAKHGRQELLAMLVNFANKHQLPVNIDARTSGGYTALHLAAMHGHVEVVKLLVGAYDADVDIRDYSGKKASQYLSRSIAEEIKNLVG 395
The following BLAST results are available for this feature:
BLAST of TCONS_00073028 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWAHC6.476e-2340.00Ankyrin repeat domain-containing protein SOWAHC OS... [more]
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