TCONS_00073019 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073019
Unique NameTCONS_00073019
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3160

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073019 ID=TCONS_00073019|Name=TCONS_00073019|organism=Clytia hemisphaerica|type=transcript|length=3160bp
gaaatttttccaaaagaaaatttgatagaAACAAGTAGAGTTTAGCAGTA
TGAAATATTGTTCATGTGAAATTTTTTACGTTTAACGTTGGAGaattaaa
agtttgaaattaaaattaaaatttgaaaatctcaCTTGTTCAATTTGGAA
TAGTGGAGAGCAATAAAAGGTGTGAATAAAAAGCTCAACCATCGGTGAAC
AGAATGTAGTTTTTACGAGTCAAAAATTTATGATAATAATTCGAATTGGA
ATAAATTAATGAATAAAGATGACGACCACGAAACGGTACTTACGACGTTT
CAGTAGCGTCGATCGTGCGTCCGTTGATCGGGAACAGgTTCTACCGGAGG
AGAAAAGTTGGATGTTAGCTGCTGCCCATGGCAACATCAAGAAGCTCGAA
AGTCTCCTCAAAGAATACCCTTCCCTGGCGAAGAAGAAGGATTTCGTTAT
GGGTTACACCGCCCTCCATTGGGCCGCCAAACTAGGGCGTACCGATATTG
TGAAATTCATTATGGGTGCAAACGTTGATATTCATTCGAAATCGCATGGT
GGTTACACGCCCTTACATATTGCTGCCATGAGTGGGCGGGACCAAGTTAT
AGTACAGTTGATTGAACTTTATAACGCAAACATTCACACACGTGACCATA
GCGGTAAGAAACCACGGGATGTTGTCAAGGATACCGTAGCTGCTGACGTT
CAAAgaAAACTGGGACGATCACTTATTCTCGACCCGAATACAGTATTAGA
TTCACGTATCGTTGCGCCAACGTTACGACGTAACCTTAATAAACCACAAC
GTTCACGGCCGTCAAGTTTTATCAAAACATTATCGGACGGTGAGATGAGC
CCAATGGCCACACCAGAAAGTGTACGGAAAAATATTAAATCCATCGGAGC
AAGTGCTCAAAGATCTATGTcattcttgaaaaagaaaaagaaagacaaaT
TACGTGACGAACAACTTTCACCACGTTCCCGTCGAAAAACACCGGACGAT
GAGCACCCACAAGATGCGCCTTGGAAACAGGAATGGAACGAAAAACAACG
GCGCCGTCCAAAATCCATTGAAATTTCATCGCCAACGGAAGTAAGTTCGA
CCACCACGACTCCAACCAAAGAGAGCGGTGGCAAGCCGCCTACCATCAGG
TCTAACTTAACACCAACACGCTACCAAAACATTGCACAGCAACCAGTGCC
ACCGCCACAGAACGAACAACTAGGTCAATCTACAatgtctttttttcttt
aaactCTTTTGAGATGTTTCTTCCCAATCATTCATTATACATATTATGAT
ACATGCATAACATCATCTTATGTCATAATTTACCATGCTACTTTTATCAA
GTAATATGAACAATTACTGTGGATAAGCTGCCAGTTTGAAGGTTTGAAGT
TATACTTTGTTCAAGCCTTTCTTCAATTACAATTGGTCTTACATTCGTTC
AGTTGGTATTTGGAAATGCATGCTACATCTTTCATATTACATACTGCACT
ACATCAATATCAATATGCACTCGTATAATATTATACAGTAATATGAGTAT
TACACGTTTTGCTCTTACCCCGAAATTGGGGACAATAATAGGATGTTTTT
AGACAGTATGTTCTCTATGATGAACATTGATTTTCGCATTTTGGAAAGTT
TCTAAGAAGGGGAGAATATTGGGGACGACagtttattttgaagattttaa
atgAAGGTTTTTACGAATTCTTGCATTTATATATTACAATACgtatttta
gtatatttttaatTGCAATATTTTTTATGTAGCTGTTATCACCGTTCCCG
ACAGATGACATTGACCACAAATCAcatgttttctaaaaaagataatATAA
AACACGTACTATGGTAATTTAAGCACTGACGTAATACCAAACGAGCAACT
GTAGCACACTGATATTATAAACAAACATTATTGGATATTGGAGTAACACT
GAAAACTGGTATCCACTTTGCACGAGTCTAGCACATTTTATGGATAGGAA
AATTCTGTACTTTTGCACCAGGAACCTGGCCTTTGGATTTCAGAACATAG
ATATAGACATCGCGTCGAAGTGCATGTGTTGAATTGCATGACAGGAAATT
ATTATAATACCAAAACGTAGGGATAACGTCTTAATGATACTACTATACCA
ACATATATATTTTACATGGTTCCTTACATCATTTGACTATTACAAGAAAA
ACTCCAATAAAGACTTAATTTAACAGGATCCCCTAAGTTATGTTTTTGTT
ATACTGTTTATAATTTGTAGGTGTTGACCAGCCCGACTTTGGACAGAAGG
ATTTTTCAGTTTTAGCTTGTTGGAGGTGGAGCTGGAAATaacattttgtc
aaatttttgctcttgcactttttttcaaaagcactAGAAccaatttaaga
ttttaattgaGGTAGGGATGTGCGTGACGTTTATTTGACGATATATTTAC
GTCATCAGCCGCCTTATTATATGAGATTTGTGCCAGCGATTTTGATCATA
GCAAAACTTCTAGCTCAATGAGCTGACAGTCTTAACTCTAATGACTTTTC
TGCTCCAAATGATTGTTGGGAAGTACAATATACGGTTAGACTGTGATCTG
GCTATTATACTACGACGAGTTACTGACTGCTACGGATAATAATATACTCA
CAATAGTTTTGTTCAGTTGTTCGTAAAAATACGTTCAgacttcaaaattt
gtaaaaaggaTCTTATAAACCATTCCATGCGTTCGTTGCTGAAAGcagtt
ttttaaaagaacacttGATATGGGAAGATTGACGAACTTCATTGAAAGGA
AGCAAAATATATAAGGAGAATCGTTTctagacccccccccctggaatcCA
TTTTCGCCCAACCAGATTAATTTTTCGCAGGTTTGTTTATACGTAGTCAG
AAACTGACAAATTCTTTACGGACGCTCTCTACTTACAAGGTAATATTTTG
CTTTATTTAGTCTAGATAATATATATGAAGTATTTAGAGAAGATTATTTT
AAAAACGGTATCTTAGCTATTATgtattcattcatttattcatttGTATA
TATCGGTTGACTATGATGTTAATTtatgtaaattttcattttaaaacttt
tagaaatcttttttctaaTGATACTTTTTGCAagaattgaaaatcttttt
catataaaat
Run BLAST on NCBI

transcript from alignment at scaffold_86:831650..851234-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073019 ID=TCONS_00073019|Name=TCONS_00073019|organism=Clytia hemisphaerica|type=transcript|length=19585bp|location=Sequence derived from alignment at scaffold_86:831650..851234- (Clytia hemisphaerica)
GAAATTTTTCCAAAAGAAAATTTGATAGAAACAAGTAGAGTTTAGCAGTA
TGAAATATTGTTCATGTGAAATTTTTTACGTTTAACGTTGGAGAATTAAA
AGTTTGAAATTAAAATTAAAATTTGAAAATCTCACTTGTTCAATTTGGAA
TAGTGGAGAGCAATAAAAGGTGTGAATAAAAAGCTCAACCATCGGTGAAC
AGAATGTAGTTTTTACGAGTCAAAAATTTATGATAATAATTCGAATTGGA
ATAAATTAATGAATAAAGATGACGACCACGAAACGGTACTTACGACGTTT
CAGTAGCGTCGATCGTGCGTCCGTTGATCGGGAACAGGTGAGTCCTAAAG
GAAAAGATCTCTCTTTCATCAACGGATTAGAATAGGTGGATTAAGAACTC
ATAGAAAACACTCCTCGTTAGGTTATCAAACTTTTTTACGAGTTTGCTAG
CAATTAAAACTTGATAAGTTGTAANNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTCTCTTGGGAGCAA
CGAGAGAAGTTAATCCACCTATTCTAATCCGTTGCTTTCATGAAAACTGT
CTTAAAGAACAGATTGAGAAAACCCATATTTGTGTATTCGTGTGTGTTGC
TTAGCAGATCCTGTTGGAGAATAATAGACATTTTGTACATTTCGATGCAT
TGCTCTTAAAGGGAAAAAAATGATCCCTCAAATTTTAAATTAATGAATTT
ACTTAAGGGTTTAAAACCTTTCAAAAACTTGAAACTGAAGATGAAAAAAA
TGGGTTTAAACTAAAATTCATATATTTTTCTGTAATTTTAAACTTTGCCG
CATTCAAACTTTTTACTACCTTTCCTATGGGACAAAATTTACAATCCTCT
TGGAAGGTTTGCTCTGGGGTTTTCCCGGGGAGGGGTAATTGTTCTTCCTC
ATGAGCACATTTTAATCTCACATCAAGTTTAAGTTTTATCTCTTTTCCTG
TTAACAGATCGTAAAATTTTAAGTCACTTATAAAAGTCTCAATCTTAATT
TTTTTTATCAATTTTCAGGTTCTACCGGAGGAGAAAAGTTGGATGTTAGC
TGCTGCCCATGGCAACATCAAGAAGCTCGAAAGTCTCCTCAAAGAATACC
CTTCCCTGGCGAAGAAGAAGGATTTCGTTATGGGTTACACCGCCCTCCAT
TGGGCCGCCAAACTAGGGCGTACCGATATTGTGAAATTCATTATGGGTGC
AAACGTTGATATTCATTCGAAATCGCATGGTGGTTACACGCCCTTACATA
TTGCTGCCATGAGTGGGCGGGACCAAGTTATAGTACAGTTGATTGAACTT
TATAGTAAGTGTTATTTTACTTTCACTATATGACGTTCGAAATCTGCCCG
GGTAGTTTGATTCTTGGCGTTCGATCGGACGTTTACCTTGTAGCATCAAA
ATAATCACCAATAAATTCCTTCGGTTTGACACTTCTTAGACTATTGTGAC
CTGTTTCAACAACTCATCTTTTTTCAAATTCTTTTTTACAGACGCAAACA
TTCACACACGTGACCATAGCGGTAAGAAACCACGGGATGTTGTCAAGGAT
ACCGTAGCTGCTGACGTTCAAAGTAAGTCCGCCATTATGGTGTTCATTTC
GAATGTCTCAACAACTTGAAGTAATTCTCTGGTCTTCAGAGGAATACCAT
AGACTTTTTTTTTTTGCTTATTTATTTATTTTTCCTTTTCTTTTCTTTTC
TTTTACATAGTCTAGTACCTCTAGTACCTCTGGCGAAAAAAATCATAGAC
TATTTTATCGCTCTTTTTATCGAACTCATTACAAGTCAACGATATCAGAT
TCCTTTTGATCTCCGAGTTATGGATGTTCAATTTAATGAGAGTTCCATTC
TTAGACAAATAAGGTATAAGTTAGGTAAGGAGTCCTTCAGTGGTCCCCAT
TGAGTTTCAAGCCGAAGGCTAGAGGTCAATCTCCTTGGTAGGATTTGAAG
CCAACAAATCCTACCAAAGTTGCGCGGCCTTGAGCGACCCGCCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTTTTTACA
CAAATGACAGATTGAAACTAAAATTTACCGCTTAATTTCGAAAAATATAT
CACTCGAAAACAAAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGATTCAATCCGTCATCAAAAATACGGCGCATATTTTAA
GGCTTCAATTTTTCTTGCCTGAGAAAGGTTAGAGATTGACCTCTAGCCCT
TCGGGCTTGAAACACTCAATGGTGGTCCCACATGCGTTCCAGCTTTCGTT
TAGTGTCTAGATGTATGTCGCCTTTTTGGCCCAGCGCTAAGCGAGTGGGC
CTTTCATTTGCAACGTTCTGTTCGTTCGTGTGTCCGTCCGTTTTGGTAGA
AACGGCGCTTAAAACCAGTATCACACTTTTTGCCGTCTGGATAGGGAAAA
GCTTGCTAAAGTCTGATACTGGCTATAAAAGATATATTTTCTGATTCCGC
GCTCCTTCAAAACAATTTTCAAAACAAACCAAGATGGCGGTCGAAGCGAG
GAGGTTGATTCATACTTTCTTGAACATTTTCTTTGCTTAGTGGTCAAGAG
ATTTTCAAACCAAAGAAATTTTGTAAAGATTTTCTTTATAAACCTTTTTC
AACATTCTTATAGTCTTTGCTCAAGTTTTCATAAATTTTTATGAGTGAAA
TTCTACCTTAAATCACTTTCATTTTTTTAGTTTCTTGTATTCAAAAAGAC
TTTATTTTTAGGAAATAATGGCTTCTGATATAGAAATAAATAAACTGAAA
TGCAGCTCATGTGTAAATTTGAATAAGATTTGAACTTTTTTCTTGATGCT
ACAGAAGAAAACAGTCACTTCTGGATCTGTCGATGTTAACAACGGTCAGT
ACAACATACAGTGGTTGGGACGTGGTATGATTTTCAAACTCAACACATAA
TTATTTCAAGTAAACTAATTCTGGAATTTGGTAATGGAAACTAAAATGGA
GCTCATGTGTAAATTGGAACAAGATTGGAACTTTTTCCGAGATGCTACGC
GTGCGTGAAAATTATTTTTTCTGGATCTGTCTCGTTTGGCGAAAGGTGCG
GTGGCTTGATTTTTCAAACTCGACACAGAATTATTTCAAANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACATATGCTGCTTTGTAC
GCTCGATTTCAACACGTTACTTTTCGCTGGGCCTTCACGCCCAACGGGCT
TCTTGTCCTATTTTGATAAAAGTGTCGGTTTATATTTTCTTATGAAATTT
ATGATAATTCTTCCTTTTTTTCGTTTTTCAGGAAAACTGGGACGATCACT
TATTCTCGGTATGCGATGATTTTTTCTTTTCCTTTCTTTGCTTTGTTTTT
GATCGATTGATTGTTAAGTGAGTTATACATTAAAATGCACATTGGGCTTT
ACCAGAAACGAAAGCCGTATGTCAAACATCTTTAATGTAGGTCCGACCTT
TTGTGAGCTACTTCCTTGAATACAACTGAAAAAAAATGCTTAAAGACTTC
CCAAAGTCACCCACGGCACTCGGTGGGAGCAAAAGGTGTGCGTCCAAGGA
GGTATACGATTTTATTCCTTTAAAGAAGCTCATGATTTGACAGGGAAAAT
CTATATCTTAAATAAAGAAGCCTTCAGGAAGCCTTCTTTTATGCACAGAA
AGGATGATCGAAGTAAACTCCTGTGTCAGAAATTTCCATCTAATTTGTAA
AGTCAGACTAATAGTCATCTCCTCTAACCACCCTCATCGTTGTTTTGGTG
TATGTCTTTGAATTTATTATTTGATAACGTGACTGAGTAGTTTTTAATGA
TTTGTATTGTAAAAAACTGAGCTTTAATGTTTGAATGGAAATTGAACGAA
TAAATAAATTAGTGAATGGATTAAGTAAAGGGTTTCGACCCAGCGTATTT
CAATTCAAGCTTTATTTGGCTAGGAAGTAGTTTTTTTTTTCATTGCTTGT
TACTAAATTGATATTTTTACAATTTTTAGCTGTATTTCACTTATTTTATC
TTATCTAGTTTTGTCAATATTTTTAAGCATGACTTTGTAGCTAGAAGTTT
TTACAACACGCACACACATACACGCTTTTTGAATAATTACATCACATACA
TTTCATCACATCATAACATAACATTTTAATCAATTATGTCAAGATATCTA
CCAGAAAATCATTACATTAAACCACAGCTATCCTCAAACCCAGCTCCAGT
GTTAAAAAGTAAATTAAAGACACTTTAAATTTTTTGCCAAATTGAAAGAA
CGACGAGCCTAAACCATGATTGACGATTTCTCTGTTTGCAGCGAAGACAA
AAAAGGCTGTAACTTTTATAATATAATTGGAATTAAATAGCGGTTTTATT
CGAANCTTTGTACGCTCGATTTCAACACGTTACTTTTCGCTGGGCCTTCA
CGCCCAACGGGCTTCTTGTCCTATTTTGATAAAAGTGTCGGTTTATATTT
TCTTATGAAATTTATGATAATTCTTCCTTTTTTTCGTTTTTCAGGAAAAC
TGGGACGATCACTTATTCTCGGTATGCGATGATTTTTTCTTTTCCTTTCT
TTGCTTTGTTTTTGATCGATTGATTGTTAAGTGAGTTATACATTAAAATG
CACATTGGGCTTTACCAGAAACGAAAGCCGTATGTCAAACATCTTTAATG
TAGGTCCGACCTTTTGTGAGCTACTTCCTTGAATACAACTGAAAAAAAAT
GCTTAAAGACTTCCCAAAGTCACCCACGGCACTTGGTGGGAGCAAAAGGT
GTGCGTCCAAGGAGGTATACGATTTTATTCCTTTAAAGAAGCTCATGGTT
TGACAGGGAAAATCTATATCTTAAATAAAGAAGCCTTCAGGAAGCCTTCT
TTTATGCACAGAAAGGATGCTCGAAGTAAACTCCTGTGTCAGAAATTTCC
ATCTAATTTGTAAAGTCAGACTAATAGTCATCTCCTCTAACCACCCTCAT
CGTTGTTTTGGTGTATGTCTTTGAATTTATTATTTGATCACGTGACTGAG
TAGTTTTTAATGATTTGTATTGTAAAAAACTGAGCTTTAATGTTTGAATG
GAAATTGAACGAATAAATAAATTAGTGAATGGATTAAGTAAAGGGTTTCG
ACCCAGCGTATTTCAATTCAAGCTTTATTTGGCTAGGAAGTAGTTTTTTT
TTTCATTGCTTGTTACTAAATTGATATTTTTACAATTTTTAGCTGTATTT
CACTTATTTTATCTTATCTAGTTTTGTCAATATTTTTAAGCATGACTTTG
TAGCTAGAAGTTTTTACAACACGCACACACATACACGCTTTTTGAATAAT
TACATCACATACATTTCATCACATCATAACATAACATTTTAATCAATTAT
GTCAAGATATCTACCAGAAAATCATTACATTAAACCACAGCTATCCTCAA
ACCCAGCTCCAGTGTTAAAAAGTAAATTAAAGACACTTTAAATTTTTTGC
CAAATTGAAAGAACGACGAGCCTATACCATGATTGACGATTTCTCTGTTT
GCAGCGAAGACAAAAAAGGCTGTAACTTTTATAATATAATTGGAATTAAA
TAGCGGTTTTATTCGAATTCTATCAAAAGTTAATACACTCTTCTCGAGAT
GCATAAATTTATTGTTGTCCTCGTTTTCAAACAGATTTCATTGCTATGAA
ATTATACATTTAAACCAATTTAAATTCACAAAAGGCAAACATTAACTCTA
AAACAAAAGTACTGGAAATTCAAAATGTCTCATGAGGTGTAAACAGCACA
ATTATCATTGAGAATATGTAATTTTATAGCAATGAAATCTGTTTGAAAAC
GAGAACAACAATAAATTTATGCATCTCGAGAAGAGTGTATTGAAGCCTCT
TTTGACTACCCTAAAAATTCTATTGAGACAGACGTTTTCTTTTGGATATC
TTGTCAATTAATGTTTACACACACACACACATACCATTACATCTTAACAC
ATTGGGCTTTTCCAGAAAAAAAACGTGCACCCCCTGTTGAGGAGGTCCAA
CCTTTTGTGACCTACCCCCATGGAATTCCGCTTATTTTTGACGGATTTTC
GTGTACCCTTATGGAATTCCACTGCATTTCAAACCTTACGCCCTTGGAAC
GAAAATGGACCTCCTCAACAGGGGGTGCACGGTTTCTTTCTGGAAAAACC
CATTCATAACTCACAATAACCATCACTAATTCACTAATCATTAATTAAAG
AAACACACGGAGTTTACTGCACTGACATTTTTTCTATGCATGATAGAAAC
CCCCCCCCCCCCCCCCGACACCCTTTTATGCCCCTTTTACAACGCACGAT
AGCCCCTCATCCCCTTGAACAGAAGCCTTCTAATATACAGTGGATTGAAA
TATTTGTCTTAAAATCTGACTGGTTCAAAACCATTTCGCGACTCTCAGAG
TTTCATAGATCGCGCACTTTACATGTATCATATGCTTAAAGGGGGATTTC
CATTTTATTTATCTCATGGCTTCAAGAACTCACTTCCAGTAATGGGCGTG
ATAAGCTTTTGCCTTACCAGAAGATTCTAACATCTAACATTCTTTTTAAA
GAGGAAATGGTTTTATCCTCTTTAAAGTAAAATAAACCAGCCGAGGCTGG
AAGGTCAGCCAATAGAGATTAGCTAGATAGCTTTAATAAGTGGGTTAACA
GATGTAAGAGATGCACTGAAACAGAGTAGACTAAATATGTTGAATAATGT
ACAAAATGTGAAACATTTGATAANNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
CACGGAACCAATAGCTGATTGGCTGTAAGTGACGTAAAATCAGTCAATAC
GTCACTTTCAACCAATCAGCTGTTGGGTCCGTGGAAGACATTGCAATGTT
GCATATGGTGAATTCATGAATTCGACGAAAGTTTTCTAAATTTTGATTGA
TCCACTGTATATTGAAAATTAGTGTTCCTTTCAAATCACGTTGTCCTCTC
TTATATACATGTAATATTTCCCTACAAACTTGTACACAGAGCCGGATTGG
ATGCTAAAAGACGCCTCAGTAGTACGGAAATCATCCGCCCAGCTAACCCA
TATCACTCTACCGTCGCCAAAATCGGGTGATAGACGCCTTGGGCGGAACT
TCCGCCCTTCTATTAGCACGTAACAAAGAATGTGTTTTCCGACCACTGGA
AGAGGTGTATCAATCGCGTATCGAATGGAGATGGTTTTTTTGGGCGATCG
ACTTTGAGTTTAAAATGCAGACAACTGAATTTGTTCCTTCGTGTGGGTTA
GACTTTTCAAGTTTTTCTGGTTTTGAAAGAACCCAGAGTTGCTTATTCCT
GAGACTCGTCAATACCGTAACTTAGTCTAATGTCCGACACCCTTCTTTAG
AGAAAGGAATAGTAGAAAGGTCGGAAACTATATTTTTTACTAAGCGACCA
GAGAGAAAAAATCTTTTGTCTATCAGTGATTCTGACCTTACTATTATTCC
TATCTCTAAAACTGGGTGTTGGAATTAGAAGANTAAGTGACAAAAATTGA
AGCTTGCAACAGATTTACACTGGAAATACTTTGGTACAACACTGACTTAT
CACATCTGACTATCGCTTGAGCCGCCATCTTGAAANTGAAGTAGAGAGCC
GCATGCTAATGGAGAGTAAACCGAAAACACCAGTTTATCCACGGTTTCTC
AATTTTAAAATTCGGTTCAGTCCACACGAATTCCCTTTCAACAAGACGTA
TAGCTGCTTCTTAACAGAAAAATATTTTCGACTGACCGGCCGAACGACTC
CCACTTTTNAAAGTTAACCCGATCGGAAGAAAGTTTAGAAATAAAAGTGA
GATCGGAAAATCGGATTTTTTTTTTGTCGTCTTATGGAACTGAATTTCAC
CTATTTGAATGCTCAGCTTAGGCTGACCAAATATTGCATGTCTGATTTCT
TGACAATTCATGATATGTACCATTGCAATGTCTTCACGGAACCAATAGCT
GATTGGCTGTAAGTGACGTAAAATCAGTCAATACGTCACTTTCAACCAAT
CAGCTGTTGGGTCCGTGGAAGACATTGCAATGTTGCATATGGTGAATTCA
TGAATTCGACGAAAGTTTTCTAAATTTTGATTGATCCACTGTATATTGAA
AATTAGTGTTCCTTTCAAATCACGTTGTCCTCTCTTATATACATGTAATA
TTTCCCTACAAACTTGTACACAGAGCCGGATTGGATGCTAAAAGACGCCT
CAGTAGTACGGAAATCATCCGCCCAGCTAACCCATATCACTCTACCGTCG
CCAAAATCGGGTGATAGACGCCTTGGGCGGAACTTCCGCCCTTCTATTAG
CACGTAACAAAGAATGTGTTTTCCGACCACTGGAAGAGGTGTATCAATCG
CGTATCGAATGGAGATGGTTTTTTTGGGCGATCGACTTTGAGTTTAAAAT
GCAGACAACTGAATTTGTTCCTTCGTGTGGGTTAGACTTTTCAAGTTTTT
CTGGTTTTGAAAGAACCCAGAGTTGCTTATTCCTGAGACTCGTCAATACC
GTAACTTAGTCTAATGTCCGACACCCTTCTTTAGAGAAAGGAATAGTAGA
AAGGTCGGAAACTATATTTTTTACTAAGCGACCAGAGAGAAAAAATCTTT
TGTCTATCAGTGATTCTGACCTTACTATTATTCCTATCTCTAAAACTGGG
TGTTGGAATTAGAAGAGACAACTTACGGTAGTATATTCTTGAACGTTGAA
ACGCAGAAAAGTTTTAATTCTTTAAAAAGCATTTTTTTATTAAGTAGTTT
GATTTTAACAAAAATTCTTAACCAAAATTTTACTTTTATCAAATTTAGTT
ATATATTTATAGAGTCTAAATTTTTAGACCCAAAATTTCTGTATCTTTTA
TTTAAATTTTTTGATATAGTGTATCGATAGTTTTCTTTTTCTTTACGACG
TTTTGTTACTTTTTGGCATTTTACTGCTAATATGTTTTGCGTGATACCTG
TTACAATCAAACTATTAACAAAGTCGGTGATGTACATTTTGATTTTGAAT
TAAACTCATCCGCTATTTCGCCCTCTTTTACTCGATTTCCAAAATTTGGT
ATAGGTAAACATTAATTTGTTTTTTAAGAATACATTAGATTTTAATTTTT
TTAATTTTTACAAAATTCTTCTAACATTTTCTGTCATATTATTTATATAT
TTACATTCATTTATGATCAGTTTTTTGTTTTCGTGAGTCAAGTGATCCAA
TAATGGCAGTCCTAATACACAGCTATCTTAAAACACTGGGTTGAACTTCT
TCGCCTGGTGAAGCAAAATGATGCAGCAATCTGCAGCCAGAGAAAGATAC
GAATCTCTCTCTAGTGTTTGTAAGATATTTTTGGTCAAATTCCAAACTAT
AAAGATTAAGAATCAATCTAGATCGATTAATCTGCAGATACTAAAAGTTT
GTATATCAAAGTTTGATTTTTGGTCTATTTTTTATACTCTGACAAGGCAA
AATTTCAAAACACCGAACCAAATTTTCACCCGAATGAGTAAATTTTGATT
AAATTTTATTATCGTGATATATTCGCCTGTTTATAATATTGTCACAAATG
ATATTTTAGTATATTTCTTCAAAATGAAAATTGGAGAAAAAATGAAGCCA
TACTCCATACCTTGTGTTTGATTCAAATTTGAAATCTTTGACATGGTTCT
AGGGATGAGTAAAATCTCGTGACTTTTCTCAACCCTCAATTTGGGCTTGA
ATTTGACACTGTCTGTCCATCTTTCTGTCTGTATGTCTGTCTATCTAAAA
ATCTCTTGGACAACCTAGAGTTTCTGAAACTTTCTCCTTTTCATTTTTTG
AAAATTTTGAACTTTTCGTTTATCTTTATATTGGGTCTTTCGAATTATAC
AGTTGCTGCTCTTTAATTCGATTTTCAAGGGAAATAGGATTTTCGTCGAA
TAGTAGAGCGTCTTTTATGGGGGTTTCTTGTTGACGGTGACTTAATTATC
GAATAATGGAGGGTATCGAATACTAGAAGGTCGAATTGGAGAGCGTCAAC
TGTACTTACGTTTATCCGAGTCCATTTGGCAAATTTTCTTACAAAAATAT
TTCTTATGACATATCATAACTCATTTTTTCAGACCCGAATACAGTATTAG
ATTCACGTATCGTTGCGCCAACGTTACGACGTAACCTTAATAAACCACAA
CGTTCACGGCCGTCAAGTTTTATCAAAACATTATCGGACGGTGAGATGAG
CCCAATGGCCACACCAGAAAGTGTACGGAAAAATATTAAATCCATCGGAG
CAAGTGCTCAAAGATCTGTGAGTTGTTTTTTTCTTCTGTTTTGTTCTGAA
ATACCCGCCAGAGTTTTTTCGCGAGCCTTATGCTAATAAATAAATTTCAT
TTTAAAGGTTACGCCATGGCGAAATATAATTTGAAATCAAAAATCAAATC
GATTAACTCTTTTTCTGGATTTGAAATCACAGTAGATCATATTTTAATTT
GAGACTGGAAATATTATTAACTTAAAAAGGGAAGTGCTTAAGTTGCGTCC
GACTTTCTGCCCTGCCTTTTCATTCTAATTGTTAGAGTAGGCACAAAGCT
GCTTGAAAATTGGCAGCTAAAATCTTTGCTCGAAAAAAGATTGTAAGAAG
ATTTTTATAAAATGTTTCAAGATTTTCGATGATGCAAAGTCAAAACTGAA
AATTCAGAAATTCTCAAAATGACAATTTTGATTTAACAACGTCTTAAAAG
TTTCTGAAAACCGATCTCTTTTGAAAATAGTTCCATTCATGTATGGAATA
TGCTGTGAAAATTTTAGAAAAACAGCTTAACTGAAACTGAAAATATTAAG
CTTTAAAGATATTTTTGTATTTTTCTCCTATATTTTGCAAAAAAATGACA
GAATTTGCTGGTTTTGCTGATGCAGAGAAGATTTTTATATATAATGTAAA
TTTTTTGTTATTAACTATTGACCCAAGCTGATAGAAATGGAATTCCAAGA
TTTTTTGCTGTTTCTCATATTTAGAACTTTCTGTTTTATCAATGCTGATT
CTAGGGCCCCAAAATACTGGTTGACCTTTAAGATGTTATATCTTTTACCC
ATCTTCTAAAGTCACAGATGTATCTGCATTTTCTTAGGTGTAGAAAGTTT
TCCCATTTTCATAACCTATTTTCACTATCCAAGGAACTAGAGTGAGTTAT
ATGCAATTTTTATCTAATTTTGTGTTGAAATATTCCCTTCAAACGCAAAA
TGTTATTTTGAATCTGTCTCAAACCATAAAAAAATGCTCATTTTTAAGTA
TGACCATCATTCTTTCCAAATAAACAAAAAACGTCTAATTCTGATAAATC
TACAGGTCAGAGTCCTCATTTTAATGACGACCTACGTTTTGGGGGCCGTC
TCCGTTTTGGGGGCCGTCTCCGTTTTGGGGGCCATATACTATATTGCATT
GTCTTTAAACATTGAAATTTCTGCCTATCTTAGAAACGTGCAATATCTAA
TCTGTCTGACTTCCTAATTTCAGATGTCATTCTTGAAAAAGAAAAAGAAA
GACAAGTGAGTACCCATTTAATTCTTCTTCCATAATTTCTCTGATTTTGG
TCGTGTATTTTCTACTGGCCACTCCCAGTACACTCGGTCGAGTTTTAACA
TTCACATTACAGTCTCTTTAACTCGAACAATTTTTCCGTTCCCTTCAGTA
GTTAACAATGCCTAAAGCTTACTCCATAACTTGAAATTTTGATAAATCGA
ACAAATTTGTATTCCGCGTGCGTGTTCGAGTTATTGAGACTCCATTGTAT
TTATAACATTTGATTTACACTTTACTAAATAACATCTTTGCAAAATATAT
TGATATTTGATCGACGTTACTGTTGAGATACTGTACGTTGTGCGACCGTA
GTACAGTGGTAGAGCATCCAGCTACGGTTCGCAAGGTCATTTGTTACCTA
CATTTTTTTTTTCATTTTCACAGATTACGTGACGAACAACTTTCACCACG
TTCCCGTCGAAAAACACCGGACGATGAGCACCCACAAGATGCGCCTTGGA
AACAGGAATGGAACGAAAAACAACGGCGCCGTCCAAAATCCATTGAAATT
TCATCGCCAACGGAAGTAAGTTCGACCACCACGACTCCAACCAAAGAGAG
CGGTGGCAAGCCGCCTACCATCAGGTCTAACTTAACACCAACACGCTACC
AAAACATTGCACAGCAACCAGTGCCACCGCCACAGAACGAACAACTAGGT
CAATCTACAATGTCTTTTTTTCTTTAAACTCTTTTGAGATGTTTCTTCCC
AATCATTCATTATACATATTATGATACATGCATAACATCATCTTATGTCA
TAATTTACCATGCTACTTTTATCAAGTAATATGAACAATTACTGTGGATA
AGCTGCCAGTTTGAAGGTTTGAAGTTATACTTTGTTCAAGCCTTTCTTCA
ATTACAATTGGTCTTACATTCGTTCAGTTGGTATTTGGAAATGCATGCTA
CATCTTTCATATTACATACTGCACTACATCAATATCAATATGCACTCGTA
TAATATTATACAGTAATATGAGTATTACACGTTTTGCTCTTACCCCGAAA
TTGGGGACAATAATAGGATGTTTTTAGACAGTATGTTCTCTATGATGAAC
ATTGATTTTCGCATTTTGGAAAGTTTCTAAGAAGGGGAGAATATTGGGGA
CGACAGTTTATTTTGAAGATTTTAAATGAAGGTTTTTACGAATTCTTGCA
TTTATATATTACAATACGTATTTTAGTATATTTTTAATTGCAATATTTTT
TATGTAGCTGTTATCACCGTTCCCGACAGATGACATTGACCACAAATCAC
ATGTTTTCTAAAAAAGATAATATAAAACACGTACTATGGTAATTTAAGCA
CTGACGTAATACCAAACGAGCAACTGTAGCACACTGATATTATAAACAAA
CATTATTGGATATTGGAGTAACACTGAAAACTGGTATCCACTTTGCACGA
GTCTAGCACATTTTATGGATAGGAAAATTCTGTACTTTTGCACCAGGAAC
CTGGCCTTTGGATTTCAGAACATAGATATAGACATCGCGTCGAAGTGCAT
GTGTTGAATTGCATGACAGGAAATTATTATAATACCAAAACGTAGGGATA
ACGTCTTAATGATACTACTATACCAACATATATATTTTACATGGTTCCTT
ACATCATTTGACTATTACAAGAAAAACTCCAATAAAGACTTAATTTAACA
GGATCCCCTAAGTTATGTTTTTGTTATACTGTTTATAATTTGTAGGTGTT
GACCAGCCCGACTTTGGACAGAAGGATTTTTCAGTTTTAGCTTGTTGGAG
GTGGAGCTGGAAATAACATTTTGTCAAATTTTTGCTCTTGCACTTTTTTT
CAAAAGCACTAGAACCAATTTAAGATTTTAATTGAGGTAGGGATGTGCGT
GACGTTTATTTGACGATATATTTACGTCATCAGCCGCCTTATTATATGAG
ATTTGTGCCAGCGATTTTGATCATAGCAAAACTTCTAGCTCAATGAGCTG
ACAGTCTTAACTCTAATGACTTTTCTGCTCCAAATGATTGTTGGGAAGTA
CAATATACGGTTAGACTGTGATCTGGCTATTATACTACGACGAGTTACTG
ACTGCTACGGATAATAATATACTCACAATAGTTTTGTTCAGTTGTTCGTA
AAAATACGTTCAGACTTCAAAATTTGTAAAAAGGATCTTATAAACCATTC
CATGCGTTCGTTGCTGAAAGCAGTTTTTTAAAAGAACACTTGATATGGGA
AGATTGACGAACTTCATTGAAAGGAAGCAAAATATATAAGGAGAATCGTT
TCTAGACCCCCCCCCCTGGAATCCATTTTCGCCCAACCAGATTAATTTTT
CGCAGGTTTGTTTATACGTAGTCAGAAACTGACAAATTCTTTACGGACGC
TCTCTACTTACAAGGTAATATTTTGCTTTATTTAGTCTAGATAATATATA
TGAAGTATTTAGAGAAGATTATTTTAAAAACGGTATCTTAGCTATTATGT
ATTCATTCATTTATTCATTTGTATATATCGGTTGACTATGATGTTAATTT
ATGTAAATTTTCATTTTAAAACTTTTAGAAATCTTTTTTCTAATGATACT
TTTTGCAAGAATTGAAAATCTTTTTCATATAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045286XLOC_045286Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073019-exon-scaffold_86-1575043694:850898..851234TCONS_00073019-exon-scaffold_86-1575043694:850898..851234Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1575043694:849331..849616TCONS_00073019-exon-scaffold_86-1575043694:849331..849616Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1575043694:849063..849143TCONS_00073019-exon-scaffold_86-1575043694:849063..849143Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1575043694:844714..844740TCONS_00073019-exon-scaffold_86-1575043694:844714..844740Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1575043694:835518..835702TCONS_00073019-exon-scaffold_86-1575043694:835518..835702Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1575043694:834280..834311TCONS_00073019-exon-scaffold_86-1575043694:834280..834311Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1575043694:831650..833861TCONS_00073019-exon-scaffold_86-1575043694:831650..833861Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1510915933:850898..851234TCONS_00073019-exon-scaffold_86-1510915933:850898..851234Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1510915933:849331..849616TCONS_00073019-exon-scaffold_86-1510915933:849331..849616Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1510915933:849063..849143TCONS_00073019-exon-scaffold_86-1510915933:849063..849143Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1510915933:844714..844740TCONS_00073019-exon-scaffold_86-1510915933:844714..844740Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1510915933:835518..835702TCONS_00073019-exon-scaffold_86-1510915933:835518..835702Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1510915933:834280..834311TCONS_00073019-exon-scaffold_86-1510915933:834280..834311Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1510915933:831650..833861TCONS_00073019-exon-scaffold_86-1510915933:831650..833861Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1491911889:850898..851234TCONS_00073019-exon-scaffold_86-1491911889:850898..851234Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1491911889:849331..849616TCONS_00073019-exon-scaffold_86-1491911889:849331..849616Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1491911889:849063..849143TCONS_00073019-exon-scaffold_86-1491911889:849063..849143Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1491911889:844714..844740TCONS_00073019-exon-scaffold_86-1491911889:844714..844740Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1491911889:835518..835702TCONS_00073019-exon-scaffold_86-1491911889:835518..835702Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1491911889:834280..834311TCONS_00073019-exon-scaffold_86-1491911889:834280..834311Clytia hemisphaericaexon
TCONS_00073019-exon-scaffold_86-1491911889:831650..833861TCONS_00073019-exon-scaffold_86-1491911889:831650..833861Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:831650..851234 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.784304	0.445978	9.84742e-08	1.77562	5.40295	4.376	0.76884	0	0.19762	1.51681e-07	0.0433078	0	0.611721	0.225057	4.28931	0.0608554	0	0.173646	4.60009	13.1383	0.154312	0.142283	5.96293	6.62737	1.40518e-05	0	0.817832	1.27672
Blast
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BLAST of TCONS_00073019 vs. Swiss-Prot (Human)
Match: SWAHC (Ankyrin repeat domain-containing protein SOWAHC OS=Homo sapiens GN=SOWAHC PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.957e-23
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:  344 PEEKSWMLAAAHGNIKKLESLLKEYPSLAKKKDFVMGYTALHWAAKLGRTDIVKFIMG-AN-----VDIHSKSHGGYTPLHIAAMSGRDQVIVQLIELYNANIHTRDHSGKKPRDVVKDTVAADVQRKLG 715
            P E +WML+A+ G    LE LL   P L  K+DF+ G+T LHWAAK GR +++  ++  AN     V+I +++ GGYT LH+AAM G  +V+  L+  Y+A++  RD+SGKK    +  ++A +++  +G
Sbjct:  266 PLEHAWMLSASDGKWDSLEGLLTCEPGLLVKRDFITGFTCLHWAAKHGRQELLAMLVNFANKHQLPVNIDARTSGGYTALHLAAMHGHVEVVKLLVGAYDADVDIRDYSGKKASQYLSRSIAEEIKNLVG 395
The following BLAST results are available for this feature:
BLAST of TCONS_00073019 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWAHC1.957e-2340.00Ankyrin repeat domain-containing protein SOWAHC OS... [more]
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