TCONS_00073014 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073014
Unique NameTCONS_00073014
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2461

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073014 ID=TCONS_00073014|Name=TCONS_00073014|organism=Clytia hemisphaerica|type=transcript|length=2461bp
CAATTTGGAATAGTGGAGAGCAATAAAAGGTGTGAATAAAAAGCTCAACC
ATCGGTGAACAGAATGTAGTTTTTACGAGTCAAAAATTTATGATAATAAT
TCGAATTGGAATAAATTAATGAATAAAGATGACGACCACGAAACGGTACT
TACGACGTTTCAGTAGCGTCGATCGTGCGTCCGTTGATCGGGAACAGgTT
CTACCGGAGGAGAAAAGTTGGATGTTAGCTGCTGCCCATGGCAACATCAA
GAAGCTCGAAAGTCTCCTCAAAGAATACCCTTCCCTGGCGAAGAAGAAGG
ATTTCGTTATGGGTTACACCGCCCTCCATTGGGCCGCCAAACTAGGGCGT
ACCGATATTGTGAAATTCATTATGGGTGCAAACGTTGATATTCATTCGAA
ATCGCATGGTGGTTACACGCCCTTACATATTGCTGCCATGAGTGGGCGGG
ACCAAGTTATAGTACAGTTGATTGAACTTTATAACGCAAACATTCACACA
CGTGACCATAGCGGTAAGAAACCACGGGATGTTGTCAAGGATACCGTAGC
TGCTGACGTTCAAAgaAAACTGGGACGATCACTTATTCTCGACCCGAATA
CAGTATTAGATTCACGTATCGTTGCGCCAACGTTACGACGTAACCTTAAT
AAACCACAACGTTCACGGCCGTCAAGTTTTATCAAAACATTATCGGACGG
TGAGATGAGCCCAATGGCCACACCAGAAAGTGTACGGAAAAATATTAAAT
CCATCGGAGCAAGTGCTCAAAGATCTATGTcattcttgaaaaagaaaaag
aaagacaaaTTACGTGACGAACAACTTTCACCACGTTCCCGTCGAAAAAC
ACCGGACGATGAGCACCCACAAGATGCGCCTTGGAAACAGGAATGGAACG
AAAAACAACGGCGCCGTCCAAAATCCATTGAAATTTCATCGCCAACGGAA
GTAAGTTCGACCACCACGACTCCAACCAAAGAGAGCGGTGGCAAGCCGCC
TACCATCAGGTCTAACTTAACACCAACACGCTACCAAAACATTGCACAGC
AACCAGTGCCACCGCCACAGAACGAACAACTAGCTGTTATCACCGTTCCC
GACAGATGACATTGACCACAAATCAcatgttttctaaaaaagataatATA
AAACACGTACTATGGTAATTTAAGCACTGACGTAATACCAAACGAGCAAC
TGTAGCACACTGATATTATAAACAAACATTATTGGATATTGGAGTAACAC
TGAAAACTGGTATCCACTTTGCACGAGTCTAGCACATTTTATGGATAGGA
AAATTCTGTACTTTTGCACCAGGAACCTGGCCTTTGGATTTCAGAACATA
GATATAGACATCGCGTCGAAGTGCATGTGTTGAATTGCATGACAGGAAAT
TATTATAATACCAAAACGTAGGGATAACGTCTTAATGATACTACTATACC
AACATATATATTTTACATGGTTCCTTACATCATTTGACTATTACAAGAAA
AACTCCAATAAAGACTTAATTTAACAGGATCCCCTAAGTTATGTTTTTGT
TATACTGTTTATAATTTGTAGGTGTTGACCAGCCCGACTTTGGACAGAAG
GATTTTTCAGTTTTAGCTTGTTGGAGGTGGAGCTGGAAATaacattttgt
caaatttttgctcttgcactttttttcaaaagcactAGAAccaatttaag
attttaattgaGGTAGGGATGTGCGTGACGTTTATTTGACGATATATTTA
CGTCATCAGCCGCCTTATTATATGAGATTTGTGCCAGCGATTTTGATCAT
AGCAAAACTTCTAGCTCAATGAGCTGACAGTCTTAACTCTAATGACTTTT
CTGCTCCAAATGATTGTTGGGAAGTACAATATACGGTTAGACTGTGATCT
GGCTATTATACTACGACGAGTTACTGACTGCTACGGATAATAATATACTC
ACAATAGTTTTGTTCAGTTGTTCGTAAAAATACGTTCAgacttcaaaatt
tgtaaaaaggaTCTTATAAACCATTCCATGCGTTCGTTGCTGAAAGcagt
tttttaaaagaacacttGATATGGGAAGATTGACGAACTTCATTGAAAGG
AAGCAAAATATATAAGGAGAATCGTTTctagacccccccccctggaatcC
ATTTTCGCCCAACCAGATTAATTTTTCGCAGGTTTGTTTATACGTAGTCA
GAAACTGACAAATTCTTTACGGACGCTCTCTACTTACAAGGTAATATTTT
GCTTTATTTAGTCTAGATAATATATATGAAGTATTTAGAGAAGATTATTT
TAAAAACGGTATCTTAGCTATTATgtattcattcatttattcatttGTAT
ATATCGGTTGACTATGATGTTAATTtatgtaaattttcattttaaaactt
ttagaaatcttttttctaaTGATACTTTTTGCAagaattgaaaatctttt
tcatataaaat
Run BLAST on NCBI

transcript from alignment at scaffold_86:831650..851094-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073014 ID=TCONS_00073014|Name=TCONS_00073014|organism=Clytia hemisphaerica|type=transcript|length=19445bp|location=Sequence derived from alignment at scaffold_86:831650..851094- (Clytia hemisphaerica)
CAATTTGGAATAGTGGAGAGCAATAAAAGGTGTGAATAAAAAGCTCAACC
ATCGGTGAACAGAATGTAGTTTTTACGAGTCAAAAATTTATGATAATAAT
TCGAATTGGAATAAATTAATGAATAAAGATGACGACCACGAAACGGTACT
TACGACGTTTCAGTAGCGTCGATCGTGCGTCCGTTGATCGGGAACAGGTG
AGTCCTAAAGGAAAAGATCTCTCTTTCATCAACGGATTAGAATAGGTGGA
TTAAGAACTCATAGAAAACACTCCTCGTTAGGTTATCAAACTTTTTTACG
AGTTTGCTAGCAATTAAAACTTGATAAGTTGTAANNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTCTC
TTGGGAGCAACGAGAGAAGTTAATCCACCTATTCTAATCCGTTGCTTTCA
TGAAAACTGTCTTAAAGAACAGATTGAGAAAACCCATATTTGTGTATTCG
TGTGTGTTGCTTAGCAGATCCTGTTGGAGAATAATAGACATTTTGTACAT
TTCGATGCATTGCTCTTAAAGGGAAAAAAATGATCCCTCAAATTTTAAAT
TAATGAATTTACTTAAGGGTTTAAAACCTTTCAAAAACTTGAAACTGAAG
ATGAAAAAAATGGGTTTAAACTAAAATTCATATATTTTTCTGTAATTTTA
AACTTTGCCGCATTCAAACTTTTTACTACCTTTCCTATGGGACAAAATTT
ACAATCCTCTTGGAAGGTTTGCTCTGGGGTTTTCCCGGGGAGGGGTAATT
GTTCTTCCTCATGAGCACATTTTAATCTCACATCAAGTTTAAGTTTTATC
TCTTTTCCTGTTAACAGATCGTAAAATTTTAAGTCACTTATAAAAGTCTC
AATCTTAATTTTTTTTATCAATTTTCAGGTTCTACCGGAGGAGAAAAGTT
GGATGTTAGCTGCTGCCCATGGCAACATCAAGAAGCTCGAAAGTCTCCTC
AAAGAATACCCTTCCCTGGCGAAGAAGAAGGATTTCGTTATGGGTTACAC
CGCCCTCCATTGGGCCGCCAAACTAGGGCGTACCGATATTGTGAAATTCA
TTATGGGTGCAAACGTTGATATTCATTCGAAATCGCATGGTGGTTACACG
CCCTTACATATTGCTGCCATGAGTGGGCGGGACCAAGTTATAGTACAGTT
GATTGAACTTTATAGTAAGTGTTATTTTACTTTCACTATATGACGTTCGA
AATCTGCCCGGGTAGTTTGATTCTTGGCGTTCGATCGGACGTTTACCTTG
TAGCATCAAAATAATCACCAATAAATTCCTTCGGTTTGACACTTCTTAGA
CTATTGTGACCTGTTTCAACAACTCATCTTTTTTCAAATTCTTTTTTACA
GACGCAAACATTCACACACGTGACCATAGCGGTAAGAAACCACGGGATGT
TGTCAAGGATACCGTAGCTGCTGACGTTCAAAGTAAGTCCGCCATTATGG
TGTTCATTTCGAATGTCTCAACAACTTGAAGTAATTCTCTGGTCTTCAGA
GGAATACCATAGACTTTTTTTTTTTGCTTATTTATTTATTTTTCCTTTTC
TTTTCTTTTCTTTTACATAGTCTAGTACCTCTAGTACCTCTGGCGAAAAA
AATCATAGACTATTTTATCGCTCTTTTTATCGAACTCATTACAAGTCAAC
GATATCAGATTCCTTTTGATCTCCGAGTTATGGATGTTCAATTTAATGAG
AGTTCCATTCTTAGACAAATAAGGTATAAGTTAGGTAAGGAGTCCTTCAG
TGGTCCCCATTGAGTTTCAAGCCGAAGGCTAGAGGTCAATCTCCTTGGTA
GGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCGGCCTTGAGCGACCC
GCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
GGTTTTTACACAAATGACAGATTGAAACTAAAATTTACCGCTTAATTTCG
AAAAATATATCACTCGAAAACAAAGGANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGATTCAATCCGTCATCAAAAATACGGCG
CATATTTTAAGGCTTCAATTTTTCTTGCCTGAGAAAGGTTAGAGATTGAC
CTCTAGCCCTTCGGGCTTGAAACACTCAATGGTGGTCCCACATGCGTTCC
AGCTTTCGTTTAGTGTCTAGATGTATGTCGCCTTTTTGGCCCAGCGCTAA
GCGAGTGGGCCTTTCATTTGCAACGTTCTGTTCGTTCGTGTGTCCGTCCG
TTTTGGTAGAAACGGCGCTTAAAACCAGTATCACACTTTTTGCCGTCTGG
ATAGGGAAAAGCTTGCTAAAGTCTGATACTGGCTATAAAAGATATATTTT
CTGATTCCGCGCTCCTTCAAAACAATTTTCAAAACAAACCAAGATGGCGG
TCGAAGCGAGGAGGTTGATTCATACTTTCTTGAACATTTTCTTTGCTTAG
TGGTCAAGAGATTTTCAAACCAAAGAAATTTTGTAAAGATTTTCTTTATA
AACCTTTTTCAACATTCTTATAGTCTTTGCTCAAGTTTTCATAAATTTTT
ATGAGTGAAATTCTACCTTAAATCACTTTCATTTTTTTAGTTTCTTGTAT
TCAAAAAGACTTTATTTTTAGGAAATAATGGCTTCTGATATAGAAATAAA
TAAACTGAAATGCAGCTCATGTGTAAATTTGAATAAGATTTGAACTTTTT
TCTTGATGCTACAGAAGAAAACAGTCACTTCTGGATCTGTCGATGTTAAC
AACGGTCAGTACAACATACAGTGGTTGGGACGTGGTATGATTTTCAAACT
CAACACATAATTATTTCAAGTAAACTAATTCTGGAATTTGGTAATGGAAA
CTAAAATGGAGCTCATGTGTAAATTGGAACAAGATTGGAACTTTTTCCGA
GATGCTACGCGTGCGTGAAAATTATTTTTTCTGGATCTGTCTCGTTTGGC
GAAAGGTGCGGTGGCTTGATTTTTCAAACTCGACACAGAATTATTTCAAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACATATGC
TGCTTTGTACGCTCGATTTCAACACGTTACTTTTCGCTGGGCCTTCACGC
CCAACGGGCTTCTTGTCCTATTTTGATAAAAGTGTCGGTTTATATTTTCT
TATGAAATTTATGATAATTCTTCCTTTTTTTCGTTTTTCAGGAAAACTGG
GACGATCACTTATTCTCGGTATGCGATGATTTTTTCTTTTCCTTTCTTTG
CTTTGTTTTTGATCGATTGATTGTTAAGTGAGTTATACATTAAAATGCAC
ATTGGGCTTTACCAGAAACGAAAGCCGTATGTCAAACATCTTTAATGTAG
GTCCGACCTTTTGTGAGCTACTTCCTTGAATACAACTGAAAAAAAATGCT
TAAAGACTTCCCAAAGTCACCCACGGCACTCGGTGGGAGCAAAAGGTGTG
CGTCCAAGGAGGTATACGATTTTATTCCTTTAAAGAAGCTCATGATTTGA
CAGGGAAAATCTATATCTTAAATAAAGAAGCCTTCAGGAAGCCTTCTTTT
ATGCACAGAAAGGATGATCGAAGTAAACTCCTGTGTCAGAAATTTCCATC
TAATTTGTAAAGTCAGACTAATAGTCATCTCCTCTAACCACCCTCATCGT
TGTTTTGGTGTATGTCTTTGAATTTATTATTTGATAACGTGACTGAGTAG
TTTTTAATGATTTGTATTGTAAAAAACTGAGCTTTAATGTTTGAATGGAA
ATTGAACGAATAAATAAATTAGTGAATGGATTAAGTAAAGGGTTTCGACC
CAGCGTATTTCAATTCAAGCTTTATTTGGCTAGGAAGTAGTTTTTTTTTT
CATTGCTTGTTACTAAATTGATATTTTTACAATTTTTAGCTGTATTTCAC
TTATTTTATCTTATCTAGTTTTGTCAATATTTTTAAGCATGACTTTGTAG
CTAGAAGTTTTTACAACACGCACACACATACACGCTTTTTGAATAATTAC
ATCACATACATTTCATCACATCATAACATAACATTTTAATCAATTATGTC
AAGATATCTACCAGAAAATCATTACATTAAACCACAGCTATCCTCAAACC
CAGCTCCAGTGTTAAAAAGTAAATTAAAGACACTTTAAATTTTTTGCCAA
ATTGAAAGAACGACGAGCCTAAACCATGATTGACGATTTCTCTGTTTGCA
GCGAAGACAAAAAAGGCTGTAACTTTTATAATATAATTGGAATTAAATAG
CGGTTTTATTCGAANCTTTGTACGCTCGATTTCAACACGTTACTTTTCGC
TGGGCCTTCACGCCCAACGGGCTTCTTGTCCTATTTTGATAAAAGTGTCG
GTTTATATTTTCTTATGAAATTTATGATAATTCTTCCTTTTTTTCGTTTT
TCAGGAAAACTGGGACGATCACTTATTCTCGGTATGCGATGATTTTTTCT
TTTCCTTTCTTTGCTTTGTTTTTGATCGATTGATTGTTAAGTGAGTTATA
CATTAAAATGCACATTGGGCTTTACCAGAAACGAAAGCCGTATGTCAAAC
ATCTTTAATGTAGGTCCGACCTTTTGTGAGCTACTTCCTTGAATACAACT
GAAAAAAAATGCTTAAAGACTTCCCAAAGTCACCCACGGCACTTGGTGGG
AGCAAAAGGTGTGCGTCCAAGGAGGTATACGATTTTATTCCTTTAAAGAA
GCTCATGGTTTGACAGGGAAAATCTATATCTTAAATAAAGAAGCCTTCAG
GAAGCCTTCTTTTATGCACAGAAAGGATGCTCGAAGTAAACTCCTGTGTC
AGAAATTTCCATCTAATTTGTAAAGTCAGACTAATAGTCATCTCCTCTAA
CCACCCTCATCGTTGTTTTGGTGTATGTCTTTGAATTTATTATTTGATCA
CGTGACTGAGTAGTTTTTAATGATTTGTATTGTAAAAAACTGAGCTTTAA
TGTTTGAATGGAAATTGAACGAATAAATAAATTAGTGAATGGATTAAGTA
AAGGGTTTCGACCCAGCGTATTTCAATTCAAGCTTTATTTGGCTAGGAAG
TAGTTTTTTTTTTCATTGCTTGTTACTAAATTGATATTTTTACAATTTTT
AGCTGTATTTCACTTATTTTATCTTATCTAGTTTTGTCAATATTTTTAAG
CATGACTTTGTAGCTAGAAGTTTTTACAACACGCACACACATACACGCTT
TTTGAATAATTACATCACATACATTTCATCACATCATAACATAACATTTT
AATCAATTATGTCAAGATATCTACCAGAAAATCATTACATTAAACCACAG
CTATCCTCAAACCCAGCTCCAGTGTTAAAAAGTAAATTAAAGACACTTTA
AATTTTTTGCCAAATTGAAAGAACGACGAGCCTATACCATGATTGACGAT
TTCTCTGTTTGCAGCGAAGACAAAAAAGGCTGTAACTTTTATAATATAAT
TGGAATTAAATAGCGGTTTTATTCGAATTCTATCAAAAGTTAATACACTC
TTCTCGAGATGCATAAATTTATTGTTGTCCTCGTTTTCAAACAGATTTCA
TTGCTATGAAATTATACATTTAAACCAATTTAAATTCACAAAAGGCAAAC
ATTAACTCTAAAACAAAAGTACTGGAAATTCAAAATGTCTCATGAGGTGT
AAACAGCACAATTATCATTGAGAATATGTAATTTTATAGCAATGAAATCT
GTTTGAAAACGAGAACAACAATAAATTTATGCATCTCGAGAAGAGTGTAT
TGAAGCCTCTTTTGACTACCCTAAAAATTCTATTGAGACAGACGTTTTCT
TTTGGATATCTTGTCAATTAATGTTTACACACACACACACATACCATTAC
ATCTTAACACATTGGGCTTTTCCAGAAAAAAAACGTGCACCCCCTGTTGA
GGAGGTCCAACCTTTTGTGACCTACCCCCATGGAATTCCGCTTATTTTTG
ACGGATTTTCGTGTACCCTTATGGAATTCCACTGCATTTCAAACCTTACG
CCCTTGGAACGAAAATGGACCTCCTCAACAGGGGGTGCACGGTTTCTTTC
TGGAAAAACCCATTCATAACTCACAATAACCATCACTAATTCACTAATCA
TTAATTAAAGAAACACACGGAGTTTACTGCACTGACATTTTTTCTATGCA
TGATAGAAACCCCCCCCCCCCCCCCCGACACCCTTTTATGCCCCTTTTAC
AACGCACGATAGCCCCTCATCCCCTTGAACAGAAGCCTTCTAATATACAG
TGGATTGAAATATTTGTCTTAAAATCTGACTGGTTCAAAACCATTTCGCG
ACTCTCAGAGTTTCATAGATCGCGCACTTTACATGTATCATATGCTTAAA
GGGGGATTTCCATTTTATTTATCTCATGGCTTCAAGAACTCACTTCCAGT
AATGGGCGTGATAAGCTTTTGCCTTACCAGAAGATTCTAACATCTAACAT
TCTTTTTAAAGAGGAAATGGTTTTATCCTCTTTAAAGTAAAATAAACCAG
CCGAGGCTGGAAGGTCAGCCAATAGAGATTAGCTAGATAGCTTTAATAAG
TGGGTTAACAGATGTAAGAGATGCACTGAAACAGAGTAGACTAAATATGT
TGAATAATGTACAAAATGTGAAACATTTGATAANNNNNNNNNNNNNNNNN
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NNNNNNNNNTCACGGAACCAATAGCTGATTGGCTGTAAGTGACGTAAAAT
CAGTCAATACGTCACTTTCAACCAATCAGCTGTTGGGTCCGTGGAAGACA
TTGCAATGTTGCATATGGTGAATTCATGAATTCGACGAAAGTTTTCTAAA
TTTTGATTGATCCACTGTATATTGAAAATTAGTGTTCCTTTCAAATCACG
TTGTCCTCTCTTATATACATGTAATATTTCCCTACAAACTTGTACACAGA
GCCGGATTGGATGCTAAAAGACGCCTCAGTAGTACGGAAATCATCCGCCC
AGCTAACCCATATCACTCTACCGTCGCCAAAATCGGGTGATAGACGCCTT
GGGCGGAACTTCCGCCCTTCTATTAGCACGTAACAAAGAATGTGTTTTCC
GACCACTGGAAGAGGTGTATCAATCGCGTATCGAATGGAGATGGTTTTTT
TGGGCGATCGACTTTGAGTTTAAAATGCAGACAACTGAATTTGTTCCTTC
GTGTGGGTTAGACTTTTCAAGTTTTTCTGGTTTTGAAAGAACCCAGAGTT
GCTTATTCCTGAGACTCGTCAATACCGTAACTTAGTCTAATGTCCGACAC
CCTTCTTTAGAGAAAGGAATAGTAGAAAGGTCGGAAACTATATTTTTTAC
TAAGCGACCAGAGAGAAAAAATCTTTTGTCTATCAGTGATTCTGACCTTA
CTATTATTCCTATCTCTAAAACTGGGTGTTGGAATTAGAAGANTAAGTGA
CAAAAATTGAAGCTTGCAACAGATTTACACTGGAAATACTTTGGTACAAC
ACTGACTTATCACATCTGACTATCGCTTGAGCCGCCATCTTGAAANTGAA
GTAGAGAGCCGCATGCTAATGGAGAGTAAACCGAAAACACCAGTTTATCC
ACGGTTTCTCAATTTTAAAATTCGGTTCAGTCCACACGAATTCCCTTTCA
ACAAGACGTATAGCTGCTTCTTAACAGAAAAATATTTTCGACTGACCGGC
CGAACGACTCCCACTTTTNAAAGTTAACCCGATCGGAAGAAAGTTTAGAA
ATAAAAGTGAGATCGGAAAATCGGATTTTTTTTTTGTCGTCTTATGGAAC
TGAATTTCACCTATTTGAATGCTCAGCTTAGGCTGACCAAATATTGCATG
TCTGATTTCTTGACAATTCATGATATGTACCATTGCAATGTCTTCACGGA
ACCAATAGCTGATTGGCTGTAAGTGACGTAAAATCAGTCAATACGTCACT
TTCAACCAATCAGCTGTTGGGTCCGTGGAAGACATTGCAATGTTGCATAT
GGTGAATTCATGAATTCGACGAAAGTTTTCTAAATTTTGATTGATCCACT
GTATATTGAAAATTAGTGTTCCTTTCAAATCACGTTGTCCTCTCTTATAT
ACATGTAATATTTCCCTACAAACTTGTACACAGAGCCGGATTGGATGCTA
AAAGACGCCTCAGTAGTACGGAAATCATCCGCCCAGCTAACCCATATCAC
TCTACCGTCGCCAAAATCGGGTGATAGACGCCTTGGGCGGAACTTCCGCC
CTTCTATTAGCACGTAACAAAGAATGTGTTTTCCGACCACTGGAAGAGGT
GTATCAATCGCGTATCGAATGGAGATGGTTTTTTTGGGCGATCGACTTTG
AGTTTAAAATGCAGACAACTGAATTTGTTCCTTCGTGTGGGTTAGACTTT
TCAAGTTTTTCTGGTTTTGAAAGAACCCAGAGTTGCTTATTCCTGAGACT
CGTCAATACCGTAACTTAGTCTAATGTCCGACACCCTTCTTTAGAGAAAG
GAATAGTAGAAAGGTCGGAAACTATATTTTTTACTAAGCGACCAGAGAGA
AAAAATCTTTTGTCTATCAGTGATTCTGACCTTACTATTATTCCTATCTC
TAAAACTGGGTGTTGGAATTAGAAGAGACAACTTACGGTAGTATATTCTT
GAACGTTGAAACGCAGAAAAGTTTTAATTCTTTAAAAAGCATTTTTTTAT
TAAGTAGTTTGATTTTAACAAAAATTCTTAACCAAAATTTTACTTTTATC
AAATTTAGTTATATATTTATAGAGTCTAAATTTTTAGACCCAAAATTTCT
GTATCTTTTATTTAAATTTTTTGATATAGTGTATCGATAGTTTTCTTTTT
CTTTACGACGTTTTGTTACTTTTTGGCATTTTACTGCTAATATGTTTTGC
GTGATACCTGTTACAATCAAACTATTAACAAAGTCGGTGATGTACATTTT
GATTTTGAATTAAACTCATCCGCTATTTCGCCCTCTTTTACTCGATTTCC
AAAATTTGGTATAGGTAAACATTAATTTGTTTTTTAAGAATACATTAGAT
TTTAATTTTTTTAATTTTTACAAAATTCTTCTAACATTTTCTGTCATATT
ATTTATATATTTACATTCATTTATGATCAGTTTTTTGTTTTCGTGAGTCA
AGTGATCCAATAATGGCAGTCCTAATACACAGCTATCTTAAAACACTGGG
TTGAACTTCTTCGCCTGGTGAAGCAAAATGATGCAGCAATCTGCAGCCAG
AGAAAGATACGAATCTCTCTCTAGTGTTTGTAAGATATTTTTGGTCAAAT
TCCAAACTATAAAGATTAAGAATCAATCTAGATCGATTAATCTGCAGATA
CTAAAAGTTTGTATATCAAAGTTTGATTTTTGGTCTATTTTTTATACTCT
GACAAGGCAAAATTTCAAAACACCGAACCAAATTTTCACCCGAATGAGTA
AATTTTGATTAAATTTTATTATCGTGATATATTCGCCTGTTTATAATATT
GTCACAAATGATATTTTAGTATATTTCTTCAAAATGAAAATTGGAGAAAA
AATGAAGCCATACTCCATACCTTGTGTTTGATTCAAATTTGAAATCTTTG
ACATGGTTCTAGGGATGAGTAAAATCTCGTGACTTTTCTCAACCCTCAAT
TTGGGCTTGAATTTGACACTGTCTGTCCATCTTTCTGTCTGTATGTCTGT
CTATCTAAAAATCTCTTGGACAACCTAGAGTTTCTGAAACTTTCTCCTTT
TCATTTTTTGAAAATTTTGAACTTTTCGTTTATCTTTATATTGGGTCTTT
CGAATTATACAGTTGCTGCTCTTTAATTCGATTTTCAAGGGAAATAGGAT
TTTCGTCGAATAGTAGAGCGTCTTTTATGGGGGTTTCTTGTTGACGGTGA
CTTAATTATCGAATAATGGAGGGTATCGAATACTAGAAGGTCGAATTGGA
GAGCGTCAACTGTACTTACGTTTATCCGAGTCCATTTGGCAAATTTTCTT
ACAAAAATATTTCTTATGACATATCATAACTCATTTTTTCAGACCCGAAT
ACAGTATTAGATTCACGTATCGTTGCGCCAACGTTACGACGTAACCTTAA
TAAACCACAACGTTCACGGCCGTCAAGTTTTATCAAAACATTATCGGACG
GTGAGATGAGCCCAATGGCCACACCAGAAAGTGTACGGAAAAATATTAAA
TCCATCGGAGCAAGTGCTCAAAGATCTGTGAGTTGTTTTTTTCTTCTGTT
TTGTTCTGAAATACCCGCCAGAGTTTTTTCGCGAGCCTTATGCTAATAAA
TAAATTTCATTTTAAAGGTTACGCCATGGCGAAATATAATTTGAAATCAA
AAATCAAATCGATTAACTCTTTTTCTGGATTTGAAATCACAGTAGATCAT
ATTTTAATTTGAGACTGGAAATATTATTAACTTAAAAAGGGAAGTGCTTA
AGTTGCGTCCGACTTTCTGCCCTGCCTTTTCATTCTAATTGTTAGAGTAG
GCACAAAGCTGCTTGAAAATTGGCAGCTAAAATCTTTGCTCGAAAAAAGA
TTGTAAGAAGATTTTTATAAAATGTTTCAAGATTTTCGATGATGCAAAGT
CAAAACTGAAAATTCAGAAATTCTCAAAATGACAATTTTGATTTAACAAC
GTCTTAAAAGTTTCTGAAAACCGATCTCTTTTGAAAATAGTTCCATTCAT
GTATGGAATATGCTGTGAAAATTTTAGAAAAACAGCTTAACTGAAACTGA
AAATATTAAGCTTTAAAGATATTTTTGTATTTTTCTCCTATATTTTGCAA
AAAAATGACAGAATTTGCTGGTTTTGCTGATGCAGAGAAGATTTTTATAT
ATAATGTAAATTTTTTGTTATTAACTATTGACCCAAGCTGATAGAAATGG
AATTCCAAGATTTTTTGCTGTTTCTCATATTTAGAACTTTCTGTTTTATC
AATGCTGATTCTAGGGCCCCAAAATACTGGTTGACCTTTAAGATGTTATA
TCTTTTACCCATCTTCTAAAGTCACAGATGTATCTGCATTTTCTTAGGTG
TAGAAAGTTTTCCCATTTTCATAACCTATTTTCACTATCCAAGGAACTAG
AGTGAGTTATATGCAATTTTTATCTAATTTTGTGTTGAAATATTCCCTTC
AAACGCAAAATGTTATTTTGAATCTGTCTCAAACCATAAAAAAATGCTCA
TTTTTAAGTATGACCATCATTCTTTCCAAATAAACAAAAAACGTCTAATT
CTGATAAATCTACAGGTCAGAGTCCTCATTTTAATGACGACCTACGTTTT
GGGGGCCGTCTCCGTTTTGGGGGCCGTCTCCGTTTTGGGGGCCATATACT
ATATTGCATTGTCTTTAAACATTGAAATTTCTGCCTATCTTAGAAACGTG
CAATATCTAATCTGTCTGACTTCCTAATTTCAGATGTCATTCTTGAAAAA
GAAAAAGAAAGACAAGTGAGTACCCATTTAATTCTTCTTCCATAATTTCT
CTGATTTTGGTCGTGTATTTTCTACTGGCCACTCCCAGTACACTCGGTCG
AGTTTTAACATTCACATTACAGTCTCTTTAACTCGAACAATTTTTCCGTT
CCCTTCAGTAGTTAACAATGCCTAAAGCTTACTCCATAACTTGAAATTTT
GATAAATCGAACAAATTTGTATTCCGCGTGCGTGTTCGAGTTATTGAGAC
TCCATTGTATTTATAACATTTGATTTACACTTTACTAAATAACATCTTTG
CAAAATATATTGATATTTGATCGACGTTACTGTTGAGATACTGTACGTTG
TGCGACCGTAGTACAGTGGTAGAGCATCCAGCTACGGTTCGCAAGGTCAT
TTGTTACCTACATTTTTTTTTTCATTTTCACAGATTACGTGACGAACAAC
TTTCACCACGTTCCCGTCGAAAAACACCGGACGATGAGCACCCACAAGAT
GCGCCTTGGAAACAGGAATGGAACGAAAAACAACGGCGCCGTCCAAAATC
CATTGAAATTTCATCGCCAACGGAAGTAAGTTCGACCACCACGACTCCAA
CCAAAGAGAGCGGTGGCAAGCCGCCTACCATCAGGTCTAACTTAACACCA
ACACGCTACCAAAACATTGCACAGCAACCAGTGCCACCGCCACAGAACGA
ACAACTAGGTCAATCTACAATGTCTTTTTTTCTTTAAACTCTTTTGAGAT
GTTTCTTCCCAATCATTCATTATACATATTATGATACATGCATAACATCA
TCTTATGTCATAATTTACCATGCTACTTTTATCAAGTAATATGAACAATT
ACTGTGGATAAGCTGCCAGTTTGAAGGTTTGAAGTTATACTTTGTTCAAG
CCTTTCTTCAATTACAATTGGTCTTACATTCGTTCAGTTGGTATTTGGAA
ATGCATGCTACATCTTTCATATTACATACTGCACTACATCAATATCAATA
TGCACTCGTATAATATTATACAGTAATATGAGTATTACACGTTTTGCTCT
TACCCCGAAATTGGGGACAATAATAGGATGTTTTTAGACAGTATGTTCTC
TATGATGAACATTGATTTTCGCATTTTGGAAAGTTTCTAAGAAGGGGAGA
ATATTGGGGACGACAGTTTATTTTGAAGATTTTAAATGAAGGTTTTTACG
AATTCTTGCATTTATATATTACAATACGTATTTTAGTATATTTTTAATTG
CAATATTTTTTATGTAGCTGTTATCACCGTTCCCGACAGATGACATTGAC
CACAAATCACATGTTTTCTAAAAAAGATAATATAAAACACGTACTATGGT
AATTTAAGCACTGACGTAATACCAAACGAGCAACTGTAGCACACTGATAT
TATAAACAAACATTATTGGATATTGGAGTAACACTGAAAACTGGTATCCA
CTTTGCACGAGTCTAGCACATTTTATGGATAGGAAAATTCTGTACTTTTG
CACCAGGAACCTGGCCTTTGGATTTCAGAACATAGATATAGACATCGCGT
CGAAGTGCATGTGTTGAATTGCATGACAGGAAATTATTATAATACCAAAA
CGTAGGGATAACGTCTTAATGATACTACTATACCAACATATATATTTTAC
ATGGTTCCTTACATCATTTGACTATTACAAGAAAAACTCCAATAAAGACT
TAATTTAACAGGATCCCCTAAGTTATGTTTTTGTTATACTGTTTATAATT
TGTAGGTGTTGACCAGCCCGACTTTGGACAGAAGGATTTTTCAGTTTTAG
CTTGTTGGAGGTGGAGCTGGAAATAACATTTTGTCAAATTTTTGCTCTTG
CACTTTTTTTCAAAAGCACTAGAACCAATTTAAGATTTTAATTGAGGTAG
GGATGTGCGTGACGTTTATTTGACGATATATTTACGTCATCAGCCGCCTT
ATTATATGAGATTTGTGCCAGCGATTTTGATCATAGCAAAACTTCTAGCT
CAATGAGCTGACAGTCTTAACTCTAATGACTTTTCTGCTCCAAATGATTG
TTGGGAAGTACAATATACGGTTAGACTGTGATCTGGCTATTATACTACGA
CGAGTTACTGACTGCTACGGATAATAATATACTCACAATAGTTTTGTTCA
GTTGTTCGTAAAAATACGTTCAGACTTCAAAATTTGTAAAAAGGATCTTA
TAAACCATTCCATGCGTTCGTTGCTGAAAGCAGTTTTTTAAAAGAACACT
TGATATGGGAAGATTGACGAACTTCATTGAAAGGAAGCAAAATATATAAG
GAGAATCGTTTCTAGACCCCCCCCCCTGGAATCCATTTTCGCCCAACCAG
ATTAATTTTTCGCAGGTTTGTTTATACGTAGTCAGAAACTGACAAATTCT
TTACGGACGCTCTCTACTTACAAGGTAATATTTTGCTTTATTTAGTCTAG
ATAATATATATGAAGTATTTAGAGAAGATTATTTTAAAAACGGTATCTTA
GCTATTATGTATTCATTCATTTATTCATTTGTATATATCGGTTGACTATG
ATGTTAATTTATGTAAATTTTCATTTTAAAACTTTTAGAAATCTTTTTTC
TAATGATACTTTTTGCAAGAATTGAAAATCTTTTTCATATAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045286XLOC_045286Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073014-exon-scaffold_86-1575043694:850898..851094TCONS_00073014-exon-scaffold_86-1575043694:850898..851094Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1575043694:849331..849616TCONS_00073014-exon-scaffold_86-1575043694:849331..849616Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1575043694:849063..849143TCONS_00073014-exon-scaffold_86-1575043694:849063..849143Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1575043694:845927..845953TCONS_00073014-exon-scaffold_86-1575043694:845927..845953Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1575043694:835518..835702TCONS_00073014-exon-scaffold_86-1575043694:835518..835702Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1575043694:834280..834311TCONS_00073014-exon-scaffold_86-1575043694:834280..834311Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1575043694:833587..833861TCONS_00073014-exon-scaffold_86-1575043694:833587..833861Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1575043694:831650..833027TCONS_00073014-exon-scaffold_86-1575043694:831650..833027Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1510915933:850898..851094TCONS_00073014-exon-scaffold_86-1510915933:850898..851094Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1510915933:849331..849616TCONS_00073014-exon-scaffold_86-1510915933:849331..849616Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1510915933:849063..849143TCONS_00073014-exon-scaffold_86-1510915933:849063..849143Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1510915933:845927..845953TCONS_00073014-exon-scaffold_86-1510915933:845927..845953Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1510915933:835518..835702TCONS_00073014-exon-scaffold_86-1510915933:835518..835702Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1510915933:834280..834311TCONS_00073014-exon-scaffold_86-1510915933:834280..834311Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1510915933:833587..833861TCONS_00073014-exon-scaffold_86-1510915933:833587..833861Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1510915933:831650..833027TCONS_00073014-exon-scaffold_86-1510915933:831650..833027Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1491911889:850898..851094TCONS_00073014-exon-scaffold_86-1491911889:850898..851094Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1491911889:849331..849616TCONS_00073014-exon-scaffold_86-1491911889:849331..849616Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1491911889:849063..849143TCONS_00073014-exon-scaffold_86-1491911889:849063..849143Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1491911889:845927..845953TCONS_00073014-exon-scaffold_86-1491911889:845927..845953Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1491911889:835518..835702TCONS_00073014-exon-scaffold_86-1491911889:835518..835702Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1491911889:834280..834311TCONS_00073014-exon-scaffold_86-1491911889:834280..834311Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1491911889:833587..833861TCONS_00073014-exon-scaffold_86-1491911889:833587..833861Clytia hemisphaericaexon
TCONS_00073014-exon-scaffold_86-1491911889:831650..833027TCONS_00073014-exon-scaffold_86-1491911889:831650..833027Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:831650..851094 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.43217	0.26663	0.00304428	0	0	0.0694375	0.000349676	1.34717e-05	3.19578	1.8366	0	1.37711	2.1715	1.85685	0.525371	0.107652	10.1534	12.2279	6.15685	4.31608	11.2467	7.29518	1.8616	2.70179	2.35909	0.000381352	0.118079	1.31649	0.141991	0.200069
Blast
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BLAST of TCONS_00073014 vs. Swiss-Prot (Human)
Match: SWAHC (Ankyrin repeat domain-containing protein SOWAHC OS=Homo sapiens GN=SOWAHC PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.413e-23
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 3 
Query:  204 PEEKSWMLAAAHGNIKKLESLLKEYPSLAKKKDFVMGYTALHWAAKLGRTDIVKFIMG-AN-----VDIHSKSHGGYTPLHIAAMSGRDQVIVQLIELYNANIHTRDHSGKKPRDVVKDTVAADVQRKLG 575
            P E +WML+A+ G    LE LL   P L  K+DF+ G+T LHWAAK GR +++  ++  AN     V+I +++ GGYT LH+AAM G  +V+  L+  Y+A++  RD+SGKK    +  ++A +++  +G
Sbjct:  266 PLEHAWMLSASDGKWDSLEGLLTCEPGLLVKRDFITGFTCLHWAAKHGRQELLAMLVNFANKHQLPVNIDARTSGGYTALHLAAMHGHVEVVKLLVGAYDADVDIRDYSGKKASQYLSRSIAEEIKNLVG 395
The following BLAST results are available for this feature:
BLAST of TCONS_00073014 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWAHC1.413e-2340.00Ankyrin repeat domain-containing protein SOWAHC OS... [more]
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