TCONS_00073007 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073007
Unique NameTCONS_00073007
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2077

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073007 ID=TCONS_00073007|Name=TCONS_00073007|organism=Clytia hemisphaerica|type=transcript|length=2077bp
ATTCCAGACTTTCTATCTGAAGAAGAGTGTGATCATATCATCAAACGAGC
CCTGGATCCACAAGAAGttaATGGTCAATCATTAGGATGGCTTGGTCGCT
ACGAAGGTTGGGATAAGGATGGCGATGGAAACATTACAATCGAAGAGATC
ATCTCGATTGCACATTTAACAAAGACTTTGGTCATGGAAGAACCCGATAT
TCGAGATATATTTAAAGCTGTTGGACAACCAAGCATCCTAGATGATGATA
TAATTACAAAAGAAGAATTTCAGTTGTTGAGCACATTAGCAGTTGAGAAA
TATCTTGACAATTTATGGCAAAACCATCCACGTTTCAAACCAAGGACCAG
TCAACAAGCATGGTTATTCATGGAACAATGGCTTGACCCTACAGTGCATA
ACATCAGAGAAAGaTTGGTACGATTAAGTGGATTACCAAGAGAAATTATA
TACGGTGGTGAAATGCTACAGGTGGTACATTACACGACAAACGGTCATTA
TCATGCACACCACGATAGTGAGACACACTTAAGCGATCATGTTCCTTGTT
GTCATCAATACTCTGGTGATACTCTGGGAAGCACTGGTGAATGCAAGTTG
TGCAGGTTTTTGACATTCATGATGTATCTAAATGATGTGGAAGATGGAGG
ACAAACTGCTTTCCCAATGGCTCATGAAGAAGTCTTCGATACTGACCAAA
TTCGTCAACACGGTAACGCAAGTACTGATAAATACAATCTCTCATACGGC
TGCAAGATTGCTAATCTAGTTGTCAAGCCGAAGAAAGGAAAAGCTGTTTT
ATGGTATAACCATTTGGTCAACCAAACCGATGGATGGATGGGCGAGTTAG
ATCCATTTAGTTTGCATGGTGGATGTGATGTGAAAAGTGGGGAAAAATGG
ATCTCCAACATGTGGATTACAGCTCCCTTTGGGAAAGATGTTCAAACACC
GAGTATATTTTTGAATAGGAAAGACTTTAAAATGGCTGAAGAGAAATTCA
aggaacaaaataaaaaagaagaacgaCAAAAAGAAGAATTATAAACACTC
AGACGCCAGTTCAAGTAGCTTTGCTATGACAGAGCATGATGTACAGGGAT
TATGTTTCAAGGCCTGAATAAGCTAGAGAGGAAACTCTTCGGTttaaaat
gaagccacttattacCCATCTATCTAAAACGCGGGAACCGCGTGGAAACA
AAATAAGCGCTGAATTCGATTGGTCGACCTAAATCTGGtgcaaatcttaa
ggcttcacaTTTTCTTACTTATTAACGTAatgttgaagattcctctctag
ccccttcaaggctttaaactcaatttgGCAGGCCAGTCGATTTTTATATT
CAAGTCATTATAAATTCATAACTTGAAAGAATCGTTACTACTAAAAATTT
GCTCTTTTTCAAGCGTTTTGCGCCTTTTTGGGCTACGCTTATGAATCGAT
AGACGGTTTAGAATGAGTGTTTTAATATCAACAGTGTCTTGAAATAATAT
GATTTAATCTAAATTTCGAATTTGTTCCTACAATAATTAcaaaatataat
tatttttgagtgTCCAAATAAAAGCGGTGAGATCACCAATGATTTATCTA
ACTTACCCCTAACAATCCAGAAgttcccttaacaatcaaaTCGATCTGAT
TGGTCGAAACCCTAAATTATGATGTATTTGACCCAAATGAAACCAATGAG
TGTTAAGAAAAAGCGTTCGATTGTTAAGGGAaattttggattgttatagg
taagtACGGTACGAAATTGCTTTCGTCAGACATCTTTGCCGTGGATGTGT
GTTCTATTTCGTAATCCGTTTACCAAAAGCCACCTCAATACTAATGATAC
GATGCTGTATTCATTCGGGAGTACACCTTCCATTGGTTGTTGAAAACATT
CGTTTCAACTAAGTCGATAATTTGAATGTTACTTATCTTCAGAATTAGTT
GAAagattttaaagggacataacagtacttgctaaacttgtaaacaaact
gtatgcagcggatacaaaatcaaaacaaatgtcacatgtcaaaataaaaa
atcaaaccaaatatggctaattttgat
Run BLAST on NCBI

transcript from alignment at scaffold_86:738360..746293-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073007 ID=TCONS_00073007|Name=TCONS_00073007|organism=Clytia hemisphaerica|type=transcript|length=7934bp|location=Sequence derived from alignment at scaffold_86:738360..746293- (Clytia hemisphaerica)
ATTCCAGACTTTCTATCTGAAGAAGAGTGTGATCATATCATCAAACGAGC
CCTGGATCCACAAGAAGGTGGAATTAAATTATTCGACAGCCAGGCTAAAG
GAGGATTGACTTCTAATGAAACACTCAAAGCTGTTGGAGGTGAATATTTT
CTTTAAGAAAGTAATGGTTCTGCAGCTAAAGGATTTTCAGCAATGGGCTT
TTCCAGAAAAAAACCCGTATACCCCCTGTTGAGGAGGTCCATCATTTTGT
GGCTGGAAATGCTGCAAGCCCCTAGAATTCCAGGCAATTTCAGGCTTAAA
CCCCTCTGGAATTCTGAATTTTAGTAGGATTTAAAAGGCTACCCCCATGG
AATTCCAGTTATTTTTGACAGATTTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTTTTGTATCTCCCTATAGAATTCCGCCACATATCAAACCTTACC
CCCTTGGAACGGAAATGGACCTCCTCAACAGGGGGTATACGGTTTTTTCT
GGAAAAGCCCAATGTGGCTACTAAGATTTCACCACCATTTTAAACGAAGA
TAAGAAAACCTCTGAGATGCTTTTTGCCAAATTTTTGCTAAATTTTCTCA
GAAAAGCATTTTTTAACAGGAACTTTTTATGTGCTTTCTCAATTTTACAA
TTTTAAGGCTTTTTCTCAGACTCAAAATTGAATCTACCCCACCAACTCCC
GTTCAAAAGTAAATCGAGTCTTTGGGTGCACTCATCCCTTAACATATCAG
AAAGATACTGCGGCGGCCGCCTAACCGAGAATTCGACCACCTCAAATGGT
GTTAAAAAGTGCGATAAAGATGTTAAAGGTTTTGTTAATTATTTTTTATT
TAGTTAATGGTCAATCATTAGGATGGCTTGGTCGCTACGAAGGTTGGGAT
AAGGATGGCGATGGAAACATTACAATCGAAGAGGTAGCCAATCCAAACCT
TAAAGGGACATAAAAGTAGTAAAATGTAAACATTGCGCAAACCACGTGTC
ATTAAAGAGAACAATTAAAATCACGTGTCCAAAACAAACTTGTAAAACAA
TTGAAACAATCAAAATTAGCCATATTTGTTTTGATTTTTTACTTTGGCAT
TGTGTATCCCGCTGCATAAGGTTTGTTTACAAATGTCGTCAGTACTTTTA
TGCCCCTTTAAAAAACCATAGACGTAGCGAGATATAACAATATATATTCT
AATCTTCTAAGATCTTCCTTTTCTTGTCTAAAACATTATTGACAAAACAT
TCATTATGTACGGTCTTATCATGCAGTACTTAGACAAAAATCCTCCCCAT
AAAGAGCACACTAGACACCCGAAAGCTATATCGAGTTAAAAGTAGGCCTT
CACGATTCAAATAAGCTTGTAAAAGATTAAGACTGAAGTTAAAAACTGTG
GCTAGATGGCCTAGAAACTGTATTTATCTCGCAGTATTTGTAATAATGTG
GTTTTTAACAATGCGCATGTTCATACCATGGTAAATTAATTTCAGATCAT
CTCGATTGCACATTTAACAAAGACTTTGGTCATGGAAGAACCCGATATTC
GAGATATGTAAGTTGATTCTAAAATACCAAAAGTTTCGGATGTGAATAAA
TTTAGGTCCCCAGTTATAAACAGTTTCGAGTATTTTGATGTGACTTCGTA
CGAAACTTGTATTTTAAGTAAGTTTTAGAGTCCACAAAGCATTACCTAGA
TCGTTTTTAAAAGATGTTCTTATTTTTTTTCACCTACAGTATGTGGCCCC
CAAAACGGCGATCAAATTTGAAATTTCTCTCAAATCTAGAGGAAAAGAGA
TTTTACAAAAATTTTTGCTGCATGAAAACCTTTAACATCTCTTCTTTATT
TCCTGGAAGTTCTTTTTCAAAATTTTCAATTTCAACAATATTTTTCAATC
GCTTAAAGATAGGTAGCTCTTTTTTAGTGGCCCCCAAAACGGAGGTTTGA
AATTTTAGCGATTTCTCGAGATATCTTTAAGATATGAATACAAAATTTTA
ACCACAGTTTTGAAATATGATTTAGAGGGTTTTGGGCATAGCTTTATTTG
ATAAAATTTTTACAGTATACCCCTGGTTGTCAAAATGCAGGTTTGGGGCC
CCCAAAACGGAGGTGTAGTTAAAATCAAATTATTAAGCCCAGTGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCC
GTCTCCGTTTTGGGGGCCATATACTGTAACTATTTTGTTTTAAACATTTT
AGATTTAAAGCTGTTGGACAACCAAGCATCCTAGATGATGGTGAGTGTTG
ATTCACTATTGTGCAGCCAACAAATTAGTACACAGTTTTGCCATTTAAAA
AGCGGGTTTCACGGTTGGCAGAGGAGCGGAATCGGCCCTTTTTTGAGCGG
AGTGGTCGAATTAGACGAAAATGTTGACGGAATTTCGGTAATCGGGTCCT
CTATCGGAGATGGAAAATTGGCCAATTTTAGTGCGGAAAAGGGAATTTAG
CCAACAAATTGGCGCAATTTCGGAATTGGCAAAAGTATTCAAAATTTAAA
GTGAATTCGAAGAATTTTTGACAAAACCCTTGAATTTCGAATGAATTTTC
GGTGCCGGAATTTTGGTTCTTTTTAGACGGTTTGCGGAAATTGGGGGAAA
ATTGCGTAATTGCCCCCCCTCCTGAGACTATCATTATCAACCAACCAATC
CATAGTTTTGGTTGAAGCTTGACCGTTCTAATTTTTTTAACCTTCAGGCG
CTCTTATGCTCATAAGAACATTTTCTACTTACACAATCCATAGTTAAATT
GACCCATTTTATTCTTTGATTTCCATACCATAGATATAATTACAAAAGAA
GAATTTCAGTTGTTGAGCACATTAGCAGTTGAGAAATATCTTGACAATTT
ATGGCAAAACCATCCACGTTTCAAACCAAGGACCAGTCAACAAGCATGGT
TATTCATGGAACAATGGCTTGACCCTACAGTGCATAACATCAGAGAAAGG
TATTTGGTATCTTAAATTCTGGCCACCCATCCTTTAAGTAACCAATTTTT
TGGAAAGTATTTTCAAAAATTCTTTCAATCATACCAATGATTAGGGATCA
CGCATTTATTCCAGAATCGGTATTTTAGGTAACCAAAAGCAATTATATAT
CAGGTATTTGGTATCTCATGTCTCAGAGGTCTCTGGTACCCTATGAGCTC
ATTACCGCAATGTTCACCCTAACTGGACTTTGAAACAGCTACTACAAATG
AAGCTCCAGATTCATAAGGAAAAACCACTATATAAAAAAGAGATTTGCAA
GAAAAAATTGACGAGTTTCCACCTGAAAATGTAATGAACAAACAAACTAT
TTGAACATTTTTTTAGATTGGTACGATTAAGTGGATTACCAAGAGAAATT
ATATACGGTGGTGAAATGCTACAGGTACTTTTATGTTGAAACTTGAAATT
TGTAGATGATACTTAAATCCATGAGTTCCAGGAAATTTCATCTCTTTAAA
GTATGCTTAAATGTCATTTTTGCAAGTCTATTCATGATATGCAACCCTAC
AATAAATAACTTCTGACATTGCGTCGGTCATTTTATTACCAAGTTTTTGT
CTCAGATGGGACTTTAAACAACAAATTAGGCAAAGTTTTTCAATTTTTCA
CAATTTTGATGAACTTAGAGATGGAAAAACCTCTTTTTGCTGAGACGGAA
GAACTTTGTACACTGCATCTGATTGGTTGTAAATATGTATAGAGGGGGGT
TTGTACTTTTACGGTGTGACGGGATTGTGACGGGATTGGCCCTTTATTAG
TAAGGTATTACGGGATTTGACGAAAAAAGAGACGGGAAAACGGTATTTTA
AAATCAGACGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT
TTTTCAATTTTCGGGATTCCGGAATTCAGCAACCCCCCCCCCCTATAGAT
CGATTCGACAAAATCCAGTTGGGGACTCCAAACAAACCTCAAGCAAGCTG
CCTGTTCCTAACTGACAAAAGTTTCACCCACAAAACGATAAAACTAAACG
GGGCTAAACGGGAAATATTTGAAGATTTTTGAGCTATCAAGGAATTACTA
AATCATCCTGTAGATATTCTTTCTACCATTTCTTAGAAAAGATGGCTGAT
CGTGGGTGAAAATGACGTCACACGGAATCGGTCTATTGGGTAAAAACCAA
TAAAATAAAATACGTTCTTTTTATTATGACAGGTGGTACATTACACGACA
AACGGTCATTATCATGCACACCACGATAGTGAGACACACTTAAGCGATCA
TGTTCCTTGTTGTCATCAATACTCTGGTGATACTCTGGGAAGCACTGGTG
AATGCAAGTTGTGCAGGTAGGTAGTGTCTGTTTCCCCATGGGTAATCGAC
AAGTGAGAGAGGATTTCTTTTGCACTGTAAAATTGAGACAAGCTGGAGTT
TTTACAAGCTCTTATTTGATTTGGTTGGTCGTTAAGATGTAATAAAAGAA
TCTCATTACTTTTTCTAAAGAACGCGTCATCTTTATCACTTTAATTGACC
AATTAGTGAAGTATCTTGTAAAAGCTCCAGCTCATCCCGTAAAATTATCT
ATTCGTAATACAAAGAGATCATCGCTGTGTCATCAATTCTGCTACAAAAA
TTTTGCCCCCTCCTGTTGTTTACACTACTGATACATCGTTGCATATTAGT
TGGGACATTTAAAGTCTAAAAAGTTTGTAGTCTAAAGCTAAATTTGTGCA
AATGTTGGTATCGGGCTACTTCTCATTGAATTTTATAAGCTTAAAATAAC
TCCATCATTGTGAAATATTAAATCGTTTTATCCAAGTCATCAGGCTAAAA
AAACAGTGACCCCCAAAAATATCTGAAGAAGATTCTTGCAACTTTCTTGT
TCACAACACGTGGTTGCATCTTATGATGTTACAGATCCTAAGGGTCGCAG
GGTCGCCCCTTACTAAAATAGACATGTTAATTATGGCAGAACATTGTTTT
GTCAGGCTCAAGTTTTACCATGTTTTACTCCTGTTTTGGTTTATAGTCAT
AAGACCTGAAGAGCTTGTAATGATTATAACTGAAAATATAATTTGTTTTT
TGACAGGTTTTTGACATTCATGATGTATCTAAATGATGTGGAAGATGGAG
GACAAACTGCTTTCCCAATGGCTCATGAAGAAGTCTTCGATACTGACGTG
AGATTACTTTAGATACTAAGCTACGATACATTTTTTACAAATATGAAGCC
GTCACAACGTCCATACAATGTTCATAAGATGGATTGGGTGTAATGTCTAG
GTAACAATTAATAGGGGAAAATTTGGCTAAGCAATTATCCCAGAAAGTTT
TTTTTGTTTCGGCAAAAATCATTGTTCGCCAGAGGACTAAATAACTGACA
CTTGACTTCCATTAACTTATTATCATCGGCGTTGTGAAAATCTTTTTTTA
CAGCAAATTCGTCAACACGGTAACGCAAGTACTGATAAATACAATCTCTC
ATACGGCTGCAAGATTGCTAATCTAGTTGTCAAGCCGAAGAAAGGAAAAG
CTGTTTTATGGTATAACCATTTGGTCAACCAAACCGATGGATGGATGGGC
GAGTTAGATCCATTTAGTTTGCATGGTGGATGTGATGTGAAAAGTGGGGA
AAAATGGATCTCCAACATGTGGATTACAGCTCCCTTTGGGAAAGATGTTC
AAACACCGAGTATATTTTTGAATAGGAAAGACTTTAAAATGGCTGAAGAG
AAATTCAAGGAACAAAATAAAAAAGAAGAACGACAAAAAGAAGAATTATA
AACACTCAGACGCCAGTTCAAGTAGCTTTGCTATGACAGAGCATGATGTA
CAGGGATTATGTTTCAAGGCCTGAATAAGCTAGAGAGGAAACTCTTCGGT
TTAAAATGAAGCCACTTATTACCCATCTATCTAAAACGCGGGAACCGCGT
GGAAACAAAATAAGCGCTGAATTCGATTGGTCGACCTAAATCTGGTGCAA
ATCTTAAGGCTTCACATTTTCTTACTTATTAACGTAATGTTGAAGATTCC
TCTCTAGCCCCTTCAAGGCTTTAAACTCAATTTGGCAGGCCAGTCGATTT
TTATATTCAAGTCATTATAAATTCATAACTTGAAAGAATCGTTACTACTA
AAAATTTGCTCTTTTTCAAGCGTTTTGCGCCTTTTTGGGCTACGCTTATG
AATCGATAGACGGTTTAGAATGAGTGTTTTAATATCAACAGTGTCTTGAA
ATAATATGATTTAATCTAAATTTCGAATTTGTTCCTACAATAATTACAAA
ATATAATTATTTTTGAGTGTCCAAATAAAAGCGGTGAGATCACCAATGAT
TTATCTAACTTACCCCTAACAATCCAGAAGTTCCCTTAACAATCAAATCG
ATCTGATTGGTCGAAACCCTAAATTATGATGTATTTGACCCAAATGAAAC
CAATGAGTGTTAAGAAAAAGCGTTCGATTGTTAAGGGAAATTTTGGATTG
TTATAGGTAAGTACGGTACGAAATTGCTTTCGTCAGACATCTTTGCCGTG
GATGTGTGTTCTATTTCGTAATCCGTTTACCAAAAGCCACCTCAATACTA
ATGATACGATGCTGTATTCATTCGGGAGTACACCTTCCATTGGTTGTTGA
AAACATTCGTTTCAACTAAGTCGATAATTTGAATGTTACTTATCTTCAGA
ATTAGTTGAAAGATTTTAAAGGGACATAACAGTACTTGCTAAACTTGTAA
ACAAACTGTATGCAGCGGATACAAAATCAAAACAAATGTCACATGTCAAA
ATAAAAAATCAAACCAAATATGGCTAATTTTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045282XLOC_045282Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073007-exon-scaffold_86-1575043694:746227..746293TCONS_00073007-exon-scaffold_86-1575043694:746227..746293Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1575043694:745311..745390TCONS_00073007-exon-scaffold_86-1575043694:745311..745390Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1575043694:744687..744748TCONS_00073007-exon-scaffold_86-1575043694:744687..744748Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1575043694:743404..743441TCONS_00073007-exon-scaffold_86-1575043694:743404..743441Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1575043694:742695..742860TCONS_00073007-exon-scaffold_86-1575043694:742695..742860Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1575043694:742270..742327TCONS_00073007-exon-scaffold_86-1575043694:742270..742327Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1575043694:740828..740961TCONS_00073007-exon-scaffold_86-1575043694:740828..740961Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1575043694:739997..740087TCONS_00073007-exon-scaffold_86-1575043694:739997..740087Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1575043694:738360..739740TCONS_00073007-exon-scaffold_86-1575043694:738360..739740Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1510915933:746227..746293TCONS_00073007-exon-scaffold_86-1510915933:746227..746293Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1510915933:745311..745390TCONS_00073007-exon-scaffold_86-1510915933:745311..745390Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1510915933:744687..744748TCONS_00073007-exon-scaffold_86-1510915933:744687..744748Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1510915933:743404..743441TCONS_00073007-exon-scaffold_86-1510915933:743404..743441Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1510915933:742695..742860TCONS_00073007-exon-scaffold_86-1510915933:742695..742860Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1510915933:742270..742327TCONS_00073007-exon-scaffold_86-1510915933:742270..742327Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1510915933:740828..740961TCONS_00073007-exon-scaffold_86-1510915933:740828..740961Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1510915933:739997..740087TCONS_00073007-exon-scaffold_86-1510915933:739997..740087Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1510915933:738360..739740TCONS_00073007-exon-scaffold_86-1510915933:738360..739740Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1491911889:746227..746293TCONS_00073007-exon-scaffold_86-1491911889:746227..746293Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1491911889:745311..745390TCONS_00073007-exon-scaffold_86-1491911889:745311..745390Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1491911889:744687..744748TCONS_00073007-exon-scaffold_86-1491911889:744687..744748Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1491911889:743404..743441TCONS_00073007-exon-scaffold_86-1491911889:743404..743441Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1491911889:742695..742860TCONS_00073007-exon-scaffold_86-1491911889:742695..742860Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1491911889:742270..742327TCONS_00073007-exon-scaffold_86-1491911889:742270..742327Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1491911889:740828..740961TCONS_00073007-exon-scaffold_86-1491911889:740828..740961Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1491911889:739997..740087TCONS_00073007-exon-scaffold_86-1491911889:739997..740087Clytia hemisphaericaexon
TCONS_00073007-exon-scaffold_86-1491911889:738360..739740TCONS_00073007-exon-scaffold_86-1491911889:738360..739740Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:738360..746293 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.228201	0.352152	0.0646893	0.147807	0	0.216251	0	0.0621532	0	0	0	0	0	0	0	0	0	0	0.511754	0.689512	0	0	0	0	0	0	0	0.0262768	0.0644454	0.0654456
Blast
[Close]
BLAST of TCONS_00073007 vs. Swiss-Prot (Human)
Match: P4HTM (Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 4.438e-40
Identity = 102/320 (31.87%), Postives = 158/320 (49.38%), Query Frame = 1 
Query:    1 IPDFLSEEECDHIIKRA---------LDPQE-----VNGQSLGWLGRYEGWDKDGDGNITIEEIISIAHLTKTLVMEEPDIRDIFKAVGQPSILDDDIITKEEFQLLSTLAVEKYLDNLWQNHPRFKPRTSQQAWLFMEQWLDPTVHNIRERLVRLSGLPREIIYGGEMLQVVHYTTNGHYHAHHDSETHLSDHVPCCHQYSGDTLGSTGECKLCRFLTFMMYLNDVEDGGQTAFPMAHEEVFDTDQIRQHGNASTDKYNLSYGCKIANLVVKPKKGKAVLWYNHLVNQTDGWMGELDPFSLHGGCDVKSGEKWISNMWI 918
            IP FL++EEC  II  A         + P E     ++   +  L  +   D++ DG++ + E+++   L     M    I++++ A+ +     D +++ +EF  +      KY+ +          R S   WL+  +     +  IR+R++RL+ L  EI+   E LQVV Y   GHYHAH DS     + + C H           E   CR++T + YLN+V  GG+T FP+A    +D   + Q      D  +    C   NL VKP++G AV WYN+L +   GW+G++D +SLHGGC V  G KWI+N WI
Sbjct:  147 IPGFLTDEECRLIIHLAQMKGLQRSQILPTEEYEEAMSTMQVSQLDLFRLLDQNRDGHLQLREVLAQTRLGNGWWMTPESIQEMYAAI-KADPDGDGVLSLQEFSNMDLRDFHKYMRSHKAESSELV-RNSHHTWLYQGEGAHHIMRAIRQRVLRLTRLSPEIVELSEPLQVVRYGEGGHYHAHVDSGPVYPETI-CSHTKLVANESVPFETS-CRYMTVLFYLNNVTGGGETVFPVADNRTYDEMSLIQD---DVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPD-GQGWVGDVDDYSLHGGCLVTRGTKWIANNWI 458
The following BLAST results are available for this feature:
BLAST of TCONS_00073007 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P4HTM4.438e-4031.88Transmembrane prolyl 4-hydroxylase OS=Homo sapiens... [more]
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