TCONS_00072860 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072860
Unique NameTCONS_00072860
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2248

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072860 ID=TCONS_00072860|Name=TCONS_00072860|organism=Clytia hemisphaerica|type=transcript|length=2248bp
GTGATAagtcaaaaaacaatgaaaataatgaTAAGTAGATGAATCAATCC
AAAAATGTCTGAAGGAAATATCCATGTTCAAAGCCTTTTCATTTGGTGTA
TGGCAGCCATTTACTTTTTTGCCTTCTCCTCACTTTACTTCCAAATCCCA
GGGTTGTATGGCAGAAAAGGGTTGATGCCAGCAGTAAAGGAACTCAAAGG
GCAATGTTTTGATTCTGATGAAAGATGTACAAACTGGGCTGAGGTTGGAG
AgtgtaaaaataatcaaaattggATGGAAAGAAACTGTATGGTCAGCTGT
AAAGTATGTGAAAAAGCTGGTGAATTATCTATAactcaaaaattgagtaa
aaagaaaactttgttGTGGTTTTCTCCAGCCCTTGGTCTTGATGTTTCCT
CTGGAATGGAATTAATTTGTCTCTATGGAATGGCTTTATCTATTGCTGCT
ATGATATCAAgtggttttcaaaacaaatttgtcttCATTACCCTATGGCT
ATTATATTTTTCAGTTTATCAGGGATATCTTGCTTTTGGAAACTGGATTC
TTGACAATTTTTGTGGCTCAATTATTTAATTCAAAAAGTGAGGACACACA
GCCATGGCTTTTTGGTTGGTGAAATGGCTCTTATTTCGCTTGATGTTTCA
GTCAGGAGTTGTCAAATTACAATCAGACTGCCCTACTTGGTGGGGTTTAA
CTGCCCTCAATTGGCATTATGAGTCACAATGTATCCCAGCACCATTAGCC
TGGTATGCCCATCAACTCCCAGAATGGTTTCAAAAATTGAGTGTAGTTGC
TACATATGTCATTGAAATTGCTCTGCCATTCCTTTTCTTTCTCCCAATAA
GAAGTTTGAGGATATGGGGTTTCTTCTCACAGATATTACTCCAAGTGTTA
ATCATCATGACAGGCAATTACACTTTCTTCAATCTTCTTACCATGACCTT
ATGTTTGTCATTAATTGATGATAGATTTCTCTTCGAATATACACCTTCAT
TTGTTGGGAAATATTTCCAGTTACCAAAAGTAACGTACGAAAAGAGAAGT
ATTTTCAGAAGATTGTCAGTGTTTTTACTAAAGACTGCTGTCACTACAAC
ACTTATTTACTGGATTGTGAAGTACTTCAATATTAGATTTGCTGCAGACT
CATCACAAATTCTTTCTGATATAGCTTTCAGCAAGGAGGAGTTCAAAAGT
GCTGTTACGAAATTGACAAGATTTTCAATCTATATGGGTATCTTATCACA
TCTGGTGCATTTGGTCAGATATCTAGGAGATGCAGCAGCTGATGATAGAA
AATTGAAGACATTAATCAGAACATTTTTTGCTGCTATCTTTGCAACAGTT
GCTGGTTGGATTTTCTGTATAAGTCTAgtaCCCTTCACTCAGATTGATAG
AAGTGTTCAAAATGACATTTGGCCAGTTGTAAAGGAGTGGAACAATGTTG
TTGATTCTTATGAACTTGTTCATAGCTACGGTCTTTTTAGAAGTATGACT
GGTGTAGGAGGACGACCAGAAATAATTATTGAAGGAACAAATGACTTTCG
AAATGGCCCATGGAAGgaaTACAATTTCAAATATAAACCAGGCAATTTGA
AAACACCTCTCCCAGTAGTTGCACCTCATCAACCGCGGTTAGACTGGCAG
ATGTGGTTTGCGGCACTTGGATCATACCAGCATAATCCTTGGTTTATTCA
TCTCATTTACAAACTACTTGAAGGTGAAAAAGATGTTTTAGACTTGGTTG
GAGAAAACCCTTTCCCAGATAAACCTCCTATTTATATCAGAAGCCGTCTG
TATACATACCATTACACAacattatcaaaacaaactacTGGTATCATTGA
TGGTGTCCTAAGATCAAGGAGGATAGGGTCATGGTGGAACAGAGATTCAC
CCAAAGAGTACACTCCACCTCTCTCTGTCAATGACGAGTCACTCATCAAC
TACATCAAAAGTTTGGGCTGGCACAAACAGaaactGAAGAAGGAAAAACC
GAATGGGAAACTCTATCTTTTCTTAAAGGCTGTTAGAAAGCTGCTGAAGA
ACTTGGACCCaacttttttcatgtttcaaaTAATCCTATTCTCtctcatt
ttcaaatatttttaccatttataaatactttattcagattttatagaaaa
actattttagattttggaatttaaacaatattttgtagattttttaggAT
TTTCAGGGAAAAACTACTTATTAGGCTTGCAACTTTTTAATAATAAAC
Run BLAST on NCBI

transcript from alignment at scaffold_86:319726..331231+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072860 ID=TCONS_00072860|Name=TCONS_00072860|organism=Clytia hemisphaerica|type=transcript|length=11506bp|location=Sequence derived from alignment at scaffold_86:319726..331231+ (Clytia hemisphaerica)
GTGATAagtcaaaaaacaatgaaaataatgaTAAGTAGATGAATCAATCC AAAAATGTCTGAAGGAAATATCCATGTTCAAAGCCTTTTCATTTGGTGTA TGGCAGCCATTTACTTTTTTGCCTTCTCCTCACTTTACTTCCAAATCCCA GGTAAGCAAAGGTTCTTctccttttttcaaaattttgtccatACGTTTTT AAGATAACTTAATTGGATCAGCTCTTGTCATCTCTCGTTAGAACATTTTG acaatttgaaaaatcatttattcaagatttttttcaaaccaTTTTATCAA ACcattataaaaatttgaaatttttgttgttgctgGTATGACATGAATAA AAGTGTTGATAAAAAGTAGTCAGAAAATGTGATGTAATTTCTCCTGCCTC AACTTTAGGGTTGTATGGCAGAAAAGGGTTGATGCCAGCAGTAAAGGAAC TCAAAGGGCAATGTTTTGATTCTGATGAAAGATGTACAAACTGGGCTGAG GTTGGAGAgtgtaaaaataatcaaaattggATGGAAAGAAACTGTATGGT CAGCTGTAAAGTATGTGAAAAAGGTGAAAGCTCTTGcgtacctatcgatt ctatttTGACTCAATTTTCCCAAGGTTGAAAGAAGATTTAGTTAATATAT AATGACTCCAAATGATTTCAACCATCAAACCATGATTTTATGTTTGGTAC AATGATAGTTTTACTAAACCAATCCATCATTCTTTTTAGCTGGTGAATTA TCTATAactcaaaaattgagtaaaaagaaaactttgttGTGGTTTTCTCC AGCCCTTGGTCTTGATGTTTCCTCTGGAATGGAATTAATTTGTCTCTATG GAATGGCTTTATCTATTGCTGCTATGATATCAAgtggttttcaaaacaaa tttgtcttCATTACCCTATGGCTATTATATTTTTCAGTTTATCAGGTAAA TGTTTGAAAACTTGGTTTCTTTTAATATAATAATGCCAGATAAATCAGGC AAGCAAATACCACTGCACAGTGATGTTTTTTGTAGAAAATCAAGCAGGGT TAAGAATGAAAGTGTCATGGAACGATGGTCTGATTTGAcataatttttcc attttttgttaTTTATCAAAGGTTGGCCAAACATTCCTTTGGTTCCAGTG GTAAGTTTGGTTTTAAAGTTTCCTATCTATTCACTTGTTGCCAGCACACA TCTAAAAGTGTGGCCAGTCATATGCTCGTAAAGAAAGacaactttttgga aaatttttgaaattcagtcTTGAATGCATTACTTAATTATCCCATGAGAA ACTCTTaatattcttttatataatCCTTTCAGGGATATCTTGCTTTTGGA AACTGGATTCTTGACAATTTTTGTGGCTCAATTATTTAATTCAAAAAGTG GTATGAATGGGTAATTAATAATAGAATTTTATGaaacaaaatcatttgaa tATTTAATCATTAGATTCAGCACATCTTTTGTGCACCTTTTTTACCTCCC TTTCCCAATATGATCTTTCTCCCAAAGTAAAAAGGCATCCCTTCACCATT ATAATCAGTTGTTGCNTTCTATTTGtgctacaaacctcaaattaggctta aaatgttccttgggaaaAAGTAGGAATCGAATGTAGCAATTACATACCTC TACCAcatatataaaattcaaaagtcaGCTATTTAGGCCAAAATGGACCG ACACCAGGAAGACACTTGTTTTTGCctggaaataaaacctaaaatctgcG CTGTTGGtgctacaaacctcaaattaggcttaaaatgttccttggaaaaa agcagGATAAGAATGTAGCAATTATGTACCTCTTACCatgtatataaaat taaaaaaattaggtttGTAGGCCAAAATGGACGGAAACCGGTAAAACCCA GTGTCTTCCCGGTTTCCGTCCATTTTGACctgaaaacctaatttttttaa ttttatatacatGGTTAGAAGTACATAATTGCTACATTCTTATCttgctt ttttccaaggaacattttaagcctaatttgaggtttgtagcaCGAACAGC gcagattttaggttttatttccagGCAAAAACAAGTGTCTTCCTGGTNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC GATTCCTACTTtttcccaaggaacattttaagcctaatttgaggtttgta gcacaaatagaacagattttaggttttatttccagGCAAAGCCTAGTTTC TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTAAGCATAATTTGAG GTTCATAGCAccaacagaacagattttagatttttttcccaggcaaaccc ttttttccccagtttcggtcaattttggccGAATATCcaaatcttttgaa gtttacatATATGGTAgaagtatataattgttacattctaatcctacttt tttccaacgaaTATTTTGACCCTAATTTGAGGCTTGTAGCACAAACAAAA NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNcaaacagaacagattttagatttttttccaggcaaaa ccctgttttttcgcaattttggtcaattttggccgaaaaacctaattttt taagtttatatatatggtagaggtatataattgttacattctaatNNNNN NNNNNCAAGGATCATTTTGAGCCTAATTTGATGgttgtagcaccaacaca gcaggttttagattttttttccaagcaaaatggcccgaaaatggcccatt ttgggTATAAAAAAGGGCGGAGAACCGCCAANCTTGAATAAGGTGATAAG TTCTGGAATCATCAAGGAATTTTCAAATCATCCAAAACTTTTTCTCAAGA TCCTGGtggcaaaataaaaataatttttttaaaaattaagtaGGCATAAA TGGAATTAAAATATCTACACTATTCTAAAACAATATGATTGTGATAGTTG TCAATTTTACAATCATAAGTTCAATGGAGACTTCAACCACCCTTATTTTA TTAAACCTATTTTTCCTCACTTATCAACCTCCCTATAAGGANTCTTAGAT TTATGTTATTTGGGTCccaaccaaccaaaaaaaattatgcaaacttaatt ttgaaaaaaaaggtctctATAGCCCACTGCTAGTGGTAAGTTTGGTTTTA AAGTTTCCTATCTATTCACTTGTTGCCAGCACACATCCAAAAGTGTGGCC AGTCATATGCTCGTAAAGAAAGacaactttttggaaaatttttgaaattc ggTCTTGAATGCATTACTTAATTATCCCATGAGAAACTCTTaatattctt ttatataatCCTTTCAGGGATATCTTGCTTTTGGAAACTGGATTCTTGAC AATTTTTGTGGCTCAATTATTTAATTCAAAAAGTGGTATGAATGGGTAAT TAATAATAGAATTTTATGaaacaaaatcatttgaatATTTAATCATTAGA TTCAGCACATCTTTTGTGCACCTTTTTTACCTCCCTTTCCCAATATGATC TTTCTCCCAAAGTAAAAAGGCATCCCTTCACCATTATAATCAGTTGTTGC TTCAAAGTAAAAGACGCTGCACCTTGAATAAGGTGATAAGTTCTGGAATC ATCAAGGAATTTTCAAATCATCCAAAACTTTTTCTCAAGATCCTGGtggc aaaataaaaataatttttttaaaaattaagtaGGCATAAATGGAATTAAA ATATCTACACTATTCTAAAACAATATGATTGTGATAGTTGTCAATTTTAC AATCATAAGTTCAATGGAGACTTCAACCACCCTTATTTTATTAAACCTAT TTTTCCTCACTTATCAACCTCCCTATAAGGATTATCTAGATTTGGTTCTA GCAATTCTGTCTAACTGAGCTAAATCGTAAGTCTTCTTCTTACTTATACA ATAACCCTCCTTTTCTTGGGCTAAAACACGcaataaaaacttctttttaG AGGACACACAGCCATGGCTTTTTGGTTGGTGAAATGGCTCTTATTTCGCT TGATGTTTCAGTCAGGAGTTGTCAAATTACAATCAGACTGCCCTACTTGG TGGGGTTTAACTGCCCTCAATTGGCATTATGAGTCACAAGTATGAATAAA AATAACCCAACTCTTTATGCCAGGGTCTACTCTACAGCTTTGCAGGTTTC AACATCAAGTGCCCTTTTGTTCAGCGAAAAATTCTGCATTCTATAATAAT GGGAATAACTCTCAAAAATGTTAGGCAGAATTTTACATTTAGTTCTATGA TTTTTCAAGTCTTGATTTGCTAAGTTTAACACTCACTatccttttctttc tttttgcctTACGTCNTTGCTAAGTTTAAAGGATAACTCTCACTATCCTT TACTTTCTGTTAGCCTTACATGATCATTTTCTTTAACTGTTTATAGTGTA TCCCAGCACCATTAGCCTGGTATGCCCATCAACTCCCAGAATGGTTTCAA AAATTGAGTGTAGTTGCTACGTAAGTTTTGTAAATATTTGTAAACACAAC CCCAAAAGTTAATCCTAGCAAAGTTGATATATTTTTGTATTCCAATGAGT CATTAGACACAACAAACACAAAAGATTTGGGCCTTCTTTTGAATGTCTTT TTAAAtcatacacccccttctcacagacccagtaggattttttcagccac aGACTGAAACTCAATGAGGATTGATATactcatttttttatgaatgaaaT TGGACcagcaattttattttattttaaacaatataTTTCGAATACTTGTG ATTCATCTTCAGgttctaaaatataaaatagtaaaacagttaaaaccatt tagtaaaaatataaatttcccATAACACGCATACATACAACCTACTCTGA TCAAAGAACTAATGtaactaaaaaatcaaaatcaaaattcactAAATCAA AAGTGAATTCcacttttttatggctggggatttcaattcttttgtttcca aattaaaaaattcagtggggatgggataAATAGCAAGAAATTTTCTATTG AAGATTGgttcatttgattattttcagtgggggacaaaaattggaggata attttccaccagggatgatattttggccaatttttttaGTGGGaccccag tgggtctgtgagaaagagGTGTAATCATGCTTTcacaaattcaaaaatct tttttcgtggGAAACTTGTGAAATCTTGATAAGCTGGGCCATATCTGGAC CTCTGAATACCCCTGAATATGGAAAATATTGACTATATataatcaggcta tttagagcataATTAAAGGGAATCTTTAAagcagctgaaaatattttcca acaGGAGAGTTCTGGTAAGATCCCAATGTTATTTAGTTTGACATTTGCAG atggcattttcattttcttgtcTTGTCTTATTTCAGATATGTCATTGAAA TTGCTCTGCCATTCCTTTTCTTTCTCCCAATAAGAAGTTTGAGGATATGG GGTTTCTTCTCACAGGTAAGATATTGGgtatatatttttacaaaatgtcG TTATGTTGTTCCAAGAAATCTATAAAGGTACTTGCATCGTTTCTATGATG TCCACAGCCATTAAAGTAGCAATTTCTGAGTTCAATGGAAATTGGAAAGA TGTGTTTAGGGCACTGTTAATTAcaattttgaactttaaacaaaataata ataattctaTTCTCCTATCTCAATGGAATAGGAGAAAattatttgattta tttattatcttttttGGCAGATATTACTCCAAGTGTTAATCATCATGACA GGCAATTACACTTTCTTCAATCTTCTTACCATGACCTTATGTTTGTCATT AATTGATGATAGATTTCTCTTCGAATATACACCTTCATTTGTTGGGAAAT GTAAGTTTCAGCAGTTTTTTTCTGCACAACACGTAAATTATTATAAAGCT TTTTTCTTTCCTTATGTTAATGGATAATgccttttcttttatttgatttt aatgaTTGTCTTTTGGCTATGCAAATGAACAACCTCTCAATTTATCTCTT CTAAAGATAGTCAAAGCTAGCCAAAACTAACTACCTAAAATCTACTTTTA CACACATTGAACTTAATTTCGTGATGCAAAATCTTTTCTAGATTTCCAGT TACCAAAAGTAACGTACGAAAAGAGAAGTATTTTCAGAAGATTGTCAGTG TTTTTACTAAAGACTGCTGTCACTACAACACTTATTTACTGGATTGTGAA GTACTTCAATATTAGATTTGCTGCAGACTCATCACAAATTCTTTCTGATA TAGGTAATTATTTAGTATTTATTTTATTacttgaattttgttttttttac tcaAGAAAAAGCACATAAAGAAAACCAGAGAAAACTAAAAAGACCTTGAT GAATATCAAGTGACAACTATCAGTTTTGTCTGATTTCTTTTATCTGAGAA TTTTAGACATTTATGATGCAAAAATGTTACACTTCTTCTATAGAGTGCCA TCCTGGCTAAAAGTGCCGCATGCTAAACCCTGCAACGTAATAATTGGAAT ATTGAAAGCTTACACACCAGAATCAGAAAGTCTTTTGTACTAAGTACCAA ActtcaaatttccaaattcaGTTATTAAGTTGAAGTGTGTTAAAATATAG TTTTGATTCAAGGTGACAGACAAGGCATCATGGgcccggcgagccatttt gagtgagagggccaacatttttttcatgctcaaaacaccttaaaacgata tccatttggggagaataatagtttttgtggtttgatttggtctcaaacca gcttgAAATAGTAACTCTTTAAAACGTATGATatggtctaccaaaaagtg gggggggggcatggaTCCCCCAGCCCCCCCTGTTGATGGGGCCCATGGac atcaaaaatttgaatgaattttcacattttgatttttccgtCTTCCAGCT TTCAGCAAGGAGGAGTTCAAAAGTGCTGTTACGAAATTGACAAGATTTTC AATCTATATGGGTATCTTATCACATCTGGTGCATTTGGTCAGATATCTAG GAGAGTAAGTtcaatcaaagaaaaattcTGATTTCTTGATTCTAATGTTT CAGAGGATATTATTTAACCTGAAGCTCTTGAAAATAACCTTAATTGCATC CCTCCATCAGCCAGCTTGGATTCTAGTCTTTCTCACTCACAATTTTTGCA AACAAGTAACCATATAAAGCAAGAATTAAGTTCTCATTTTTATCAGAAGT TTGGTTTCTTCTAAAATACTTTCATGAAACTCAACTATAAAGTTAATTTT CCATTTGCAATCATGTTTACAGTCAAtggtgttttttattttcattgtga TTTTCATCTTTTCAGTGCAGCAGCTGATGATAGAAAATTGAAGACATTAA TCAGAACATTTTTTGCTGCTATCTTTGCAACAGTTGCTGGTTGGATTTTC TGTATAAGTCTAGTAAGTGTACAATTCCTGGGATGTGTTAAACAGTTAGT TATACTTTTAGAATTTGGGATTTATCttctaatctacctgcaccaagttC AGATTGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNTTAATCAATTAAGAAAGTTATTAAGATC TTTTTCTTAGTTTTAGTAGACTGAAATTCTTTATCGAGTCATTGCTCATC AACTAATTTTCTAACaacttttcttcaattttcaggtaCCCTTCACTCAG ATTGATAGAAGTGTTCAAAATGACATTTGGCCAGTTGTAAAGGAGTGGAA CAATGTTGTTGATTCTTATGAACTTGTTCATAGCTACGGTCTTTTTAGAA GGTATGAATTACAAAATAATTCTTCAACAGTTTTTTAAGTAAAACCATAT AGTAACCAGTGTTGCAAATAAGGAATTTCAAGTTGGCCGGTGATTACTCA ATCAGAAAGCTCACTAATAATGAAACTATCAAAATTTCATGGGAAAAAAA CACACATATTAGCTTAAAAATGacaccggccgttatttgcagcactggtA ACTACTCCATTCGTTTACTATAGCCACTTGTACCAAAGTAGTATATTATT AATTCAATTTAGTATGAAAAGGATGACTAATAAAAAATTGGATTTGTTTT CATCCTTTCAGTATGACTGGTGTAGGAGGACGACCAGAAATAATTATTGA AGGAACAAATGACTTTCGAAATGGCCCATGGAAGGTTAGAAGCTTGTTGA TTTAcagaagttttttttcttcaaaatgatgATAAGAAACACTATCTCTT TATATTAACTCAGGTATTTGAAGTTCCAAGTACTTGTGAATTGCTCTAGT AAGAggttctgatatgaaatattggaagaaaaattaagaatcaaaatctt tttaattttaggaaTACAATTTCAAATATAAACCAGGCAATTTGAAAACA CCTCTCCCAGTAGTTGGTAAGTTATGTGTTGTACTGCTACTGAACCCAAA TACTAACTTCAGTGTAAACTGCTGCTTTACACTGGGAATTTATAAAATCG CCATATTGACTCATAGACAAAAGAAACGAGATGGGATGAGATGGCACATC TCCTtgcaataaattttcaaaagtgctAAAAGATAAATACTGACCAGACA TCCCCTTCAATGAACTTGATATCCCTTGAAAAACATAcatgaaaattttg taaatgcaaggctcgaaataacgatttcgAGTGGGTCGGACAAAAGGTCC AATCaaggttgctttagcttgaaaattatatgaTTATTCGGTCAgacatg aagctatttgggttGGACAATGTCAGATGTCAGATAGTAATTTTAAACCT TGTAAATGTTATCTTTTCTCATAGCACCTCATCAACCGCGGTTAGACTGG CAGATGTGGTTTGCGGCACTTGGATCATACCAGCATAATCCTTGGTTTAT TCATCTCATTTACAAACTACTTGAAGGTGAAAAAGATGTTTTAGACTTGG TTGGAGAAAACCCTTTCCCAGATAAACCTCCTATTTATATCAGAAGCCGT CTGTATACATACCATTACACAacattatcaaaacaaactacTGGTATCAT TGATGGTGTCCTAAGATCAAGGTAAGGACATTGTACTCAACAAAATGCCT TCTAACTCTTTGTTCATTAACTTGGGTTTGAGAAAATTACTATTTTTTAG TAATAACTCACTCATCTAGATAACAAACAGTAGCTCTTTTAGCAGTATAT TTCACAGCGGCCAAATTTAACAATCGTCGATATCATTTGAAGTAGCATTA TATTTTGTATTCCCTGATTGAATTTACCTTCGCAAATGTTCACCATTATT ATTTTGCTTTGATATTATTTTCCACCAAGGCGAAccctaaaaaatttttc atttccgGTCCACCAAAGCTTTTTGTAATTAATAGCATTTCTTTCAGTGA AAAAGAGAACAAATATAAAGACAGAATGTGGGGTAACACTAAAAGCCAGA GagctgatttttttcttccaaacttttttattagaaatcatGAAAAGGTG GACCGGAAACGAAAAAAATTTTAGGGTCGGCCCAGACTCTCGGATTAAAA GCCTTGAAagaatctttgatttttttatttgttgataGGAGGATAGGGTC ATGGTGGAACAGAGATTCACCCAAAGAGTACACTCCACCTCTCTCTGTCA ATGACGAGTCACTCATCAACTACATCAAAAGTTTGGGCTGGCACAAACAG GTATGCCTACAATAACCTTTAAGAGttcctttgaaaaaagttttttcagc aCTGATTGGAGcaggtttttttgaaaaaaaagtgtgaaaattgttgaaaa tcaGAGTCAGTTTATATACAAAAgctatatttgaaaaacataaaatttat tGGATACAACTTTTGATACCCGTACTACTGTCTAACCCTGTCAAATTTAT GCTTAGTTTCCAGAGAGGTTTCAATCCTTTTAAAAGCTGAAACCCCTCTT TTCAATTGGAAAAAGTTTTATTCCCTCTATATCCcttcttgaaaaattta gatCCTTCCTTAAAAAAGGAGGCGggacagcaaaaaaaattactgaGGCA GTGGGTCTTTCAAATGCTGTTAATACAGTCAGGGACCCTTATTCTGTTTA CACAACATCTTGtttctttcttgattttttataaaaaaattagaaacgTG CAATTATTATTCGGACTTTATTGCTTATTATACTTCTCTGTTAGTGTTTA AAAGAGTATTGTCtagtcaattttattttttctttcagaaactGAAGAAG GAAAAACCGAATGGGAAACTCTATCTTTTCTTAAAGGCTGTTAGAAAGCT GCTGAAGAACTTGGACCCaacttttttcatgtttcaaaTAATCCTATTCT Ctctcattttcaaatatttttaccatttataaatactttattcagatttt atagaaaaactattttagattttggaatttaaacaatattttgtagattt tttaggATTTTCAGGGAAAAACTACTTATTAGGCTTGCAACTTTTTAATA ATAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045219XLOC_045219Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072860-exon-scaffold_86-1491911889:319726..319876TCONS_00072860-exon-scaffold_86-1491911889:319726..319876Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:319726..319876TCONS_00072860-exon-scaffold_86-1510915933:319726..319876Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:319726..319876TCONS_00072860-exon-scaffold_86-1575043694:319726..319876Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:320134..320298TCONS_00072860-exon-scaffold_86-1491911889:320134..320298Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:320134..320298TCONS_00072860-exon-scaffold_86-1510915933:320134..320298Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:320134..320298TCONS_00072860-exon-scaffold_86-1575043694:320134..320298Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:320465..320670TCONS_00072860-exon-scaffold_86-1491911889:320465..320670Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:320465..320670TCONS_00072860-exon-scaffold_86-1510915933:320465..320670Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:320465..320670TCONS_00072860-exon-scaffold_86-1575043694:320465..320670Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:321058..321125TCONS_00072860-exon-scaffold_86-1491911889:321058..321125Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:321058..321125TCONS_00072860-exon-scaffold_86-1510915933:321058..321125Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:321058..321125TCONS_00072860-exon-scaffold_86-1575043694:321058..321125Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:324226..324364TCONS_00072860-exon-scaffold_86-1491911889:324226..324364Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:324226..324364TCONS_00072860-exon-scaffold_86-1510915933:324226..324364Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:324226..324364TCONS_00072860-exon-scaffold_86-1575043694:324226..324364Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:324672..324745TCONS_00072860-exon-scaffold_86-1491911889:324672..324745Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:324672..324745TCONS_00072860-exon-scaffold_86-1510915933:324672..324745Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:324672..324745TCONS_00072860-exon-scaffold_86-1575043694:324672..324745Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:325662..325740TCONS_00072860-exon-scaffold_86-1491911889:325662..325740Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:325662..325740TCONS_00072860-exon-scaffold_86-1510915933:325662..325740Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:325662..325740TCONS_00072860-exon-scaffold_86-1575043694:325662..325740Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:325996..326125TCONS_00072860-exon-scaffold_86-1491911889:325996..326125Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:325996..326125TCONS_00072860-exon-scaffold_86-1510915933:325996..326125Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:325996..326125TCONS_00072860-exon-scaffold_86-1575043694:325996..326125Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:326367..326528TCONS_00072860-exon-scaffold_86-1491911889:326367..326528Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:326367..326528TCONS_00072860-exon-scaffold_86-1510915933:326367..326528Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:326367..326528TCONS_00072860-exon-scaffold_86-1575043694:326367..326528Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:327174..327279TCONS_00072860-exon-scaffold_86-1491911889:327174..327279Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:327174..327279TCONS_00072860-exon-scaffold_86-1510915933:327174..327279Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:327174..327279TCONS_00072860-exon-scaffold_86-1575043694:327174..327279Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:327591..327687TCONS_00072860-exon-scaffold_86-1491911889:327591..327687Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:327591..327687TCONS_00072860-exon-scaffold_86-1510915933:327591..327687Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:327591..327687TCONS_00072860-exon-scaffold_86-1575043694:327591..327687Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:328411..328526TCONS_00072860-exon-scaffold_86-1491911889:328411..328526Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:328411..328526TCONS_00072860-exon-scaffold_86-1510915933:328411..328526Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:328411..328526TCONS_00072860-exon-scaffold_86-1575043694:328411..328526Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:328837..328909TCONS_00072860-exon-scaffold_86-1491911889:328837..328909Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:328837..328909TCONS_00072860-exon-scaffold_86-1510915933:328837..328909Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:328837..328909TCONS_00072860-exon-scaffold_86-1575043694:328837..328909Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:329087..329141TCONS_00072860-exon-scaffold_86-1491911889:329087..329141Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:329087..329141TCONS_00072860-exon-scaffold_86-1510915933:329087..329141Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:329087..329141TCONS_00072860-exon-scaffold_86-1575043694:329087..329141Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:329550..329796TCONS_00072860-exon-scaffold_86-1491911889:329550..329796Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:329550..329796TCONS_00072860-exon-scaffold_86-1510915933:329550..329796Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:329550..329796TCONS_00072860-exon-scaffold_86-1575043694:329550..329796Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:330314..330425TCONS_00072860-exon-scaffold_86-1491911889:330314..330425Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:330314..330425TCONS_00072860-exon-scaffold_86-1510915933:330314..330425Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:330314..330425TCONS_00072860-exon-scaffold_86-1575043694:330314..330425Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1491911889:330964..331231TCONS_00072860-exon-scaffold_86-1491911889:330964..331231Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1510915933:330964..331231TCONS_00072860-exon-scaffold_86-1510915933:330964..331231Clytia hemisphaericaexon
TCONS_00072860-exon-scaffold_86-1575043694:330964..331231TCONS_00072860-exon-scaffold_86-1575043694:330964..331231Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:319726..331231 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.414377 0.0305323 0 0 1.06466e-09 0 3.00065e-05 0 0.920761 2.1212 1.41182 2.07054 1.33801 1.03589 0 0 0 0 0 0 0 0 0 0 6.15047e-05 0.00238181 0.0377626 0 6.14028e-09 0.0420659
Blast
BLAST of TCONS_00072860 vs. Swiss-Prot (Human)
Match: LMF2 (Lipase maturation factor 2 OS=Homo sapiens GN=LMF2 PE=1 SV=2)

HSP 1 Score: 390.963 bits (1003), Expect = 4.303e-124
Identity = 258/707 (36.49%), Postives = 375/707 (53.04%), Query Frame = 1
Query:   64 GNIHVQSLFIWCMAAIYFFAFSSLYFQIPGLYGRKGLMPAVKELKGQCFDSDERCTNWAEVGECKNNQNWMERNCMVSCKVCEKAGELSITQKLSKKKTLLWFSPALGLDVSSGMELICLYGMALSIAAMISSGFQNKFVFITLWLLYFSVYQG-----YLAFGNWILDNFCGSII*F--------------KK*G---HTAMAFWLVKWLLFRLMFQSGVVKLQSDCPTWWGLTALNWHYESQCIPAPLAWYAHQLPEWFQKLSVVATYVIEIALPFLFFLPIRSLRIWGFFSQILLQVLIIMTGNYTFFNLLTMTLCLSLIDDRFLFEYTPSFVGKYFQL--PKVTYEKRSIFRRLSVFLLKTAVTTTLIYWIVKYFNIRFAADSSQILSDIAFSKEEFKSAVTKLTRFSIYMGILSHLVHLVRYL---GDAAADDRKLKTLIRTFFAAIFATVAGWIFCISLVPFTQIDRSVQNDIWPVVKEWNNVVDSYELVHSYGLFRSMTGVGGRPEIIIEGTNDFRNGPWKEYNFKYKPGNLKTPLPVVAPHQPRLDWQMWFAALGSYQHNPWFIHLIYKLLEGEKDVLDLVGEN----PFPDKPPIYIRSRLYTYHYTTLSKQTTGIIDGVLRSRRIGSWWNRDSPKEYTPPLSVNDESLINYIKSLGWH-KQKLKKEKPNGKLYLFLKAVRKLLKNLDPTFFMFQIIL 2088
            G+   + LF+  +AA++ FAF+SLY QIPGLYG +G++PA + L+ Q              G+ +  Q W                         +  TLLW +P LGLD + G+EL+ L G  +++ A++ S  ++  +++ LW  Y S  Q      Y  + + +L+    +++                ++ G   H  + FWLV+WLLFRLMF SGVVKL S CP WWGLTAL +HYE+QC+P P AW+AH LP W  KLSVVAT++IEIA+P LFF PIR LR+  F+SQ+LLQVLII+TGNY FFNL+T+ L  +L+DD+ L         K      PK      S+   L+V+ L       L Y  V YF +        I S   F+  +F   +  LT  ++++G+ S +  L+  L          RKL  +++       ATVA  +F ISLVP++ ++      +W         V+  +L +SYGLFR MTG+GGRPE+++EG+ D  +  W E  F YKPGNL  P PVV PHQPRLDWQMWFAALG + H+PWF  L+ +LL+G++ V+ LV       PF  +PP Y+R++ Y Y ++   +Q              G WW R   +E+ P +S+ D +L   ++  G   K   +    N  L   L   R  L  L+    ++ +++
Sbjct:    3 GSRLPRQLFLQGVAAVFMFAFASLYTQIPGLYGPEGILPARRTLRPQ--------------GKGRWQQLW-------------------------ETPTLLWEAPRLGLDTAQGLELLSLLGALVALGALLLSPLRHPVIYLLLWAAYLSACQVGQVFLYFQWDSLLLETGFLAVLVAPLRPASHRKEAPQGRQAGALPHEDLPFWLVRWLLFRLMFASGVVKLTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPIRRLRLAAFYSQVLLQVLIIITGNYNFFNLMTLVLTTALLDDQHLAAEPGHGSRKKTATSWPKALLATLSLLLELAVYGL-------LAYGTVHYFGLEVDWQQRTIHSRTTFTFHQFSQWLKTLTLPTVWLGVASLVWELLSALWRWTQVRGWLRKLSAVVQLSLVGT-ATVA--LFLISLVPYSYVEPGTHGRLWTGAHRLFGAVEHLQLANSYGLFRRMTGLGGRPEVVLEGSYDGHH--WTEIEFMYKPGNLSRPPPVVVPHQPRLDWQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLVQSQVARYPFHKQPPTYVRAQRYKYWFSQPGEQ--------------GQWWRRQWVEEFFPSVSLGDPTLETLLRQFGLQEKSPPRTRSANSTLAQALHWTRSQLSPLEAPALLWGLLM 644          
The following BLAST results are available for this feature:
BLAST of TCONS_00072860 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LMF24.303e-12436.49Lipase maturation factor 2 OS=Homo sapiens GN=LMF2... [more]
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