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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072846 ID=TCONS_00072846|Name=TCONS_00072846|organism=Clytia hemisphaerica|type=transcript|length=1824bp
TATAGATtactaaaaatgaaataaaaaactaGAAAGATTAATGAATGGAT
GGAAAAGATCACCAAAAATGAAGTAGTCATGATGATTTAGAAAGATAAAA
GATATGGCACTCCCAACTTCCTCTTCTGCAAAGCGAAAACAAAGGGAAGT
CATTGTATTGAGTGATGACGACAacgatgatgacgtcatcactaaaCAAC
CGGTAACGAAGAAAACTAAAGCAAAGAATAATGATGGAGACGATCTTACT
CATTTATTAAATGACCAAAGTGATGACAACATCGCTAAACAACCGGTACC
GAAGAAAGCCAAAACAAATGATAGTGGGAAAGATGACCTCACTCATTTAC
TAAATAATGACGATGATGATTTAGCATTTCATGAGATCCCAACTGCGGAT
GATGGTGCAAATTCCAACGATACAACACCCGAAGCTCCACCTCAAGAAGG
TTCAAAAGAGTTCACAGTGCTGTCATGGAACATTGATGGTTTGGAAGAAG
AATATTTGATGGAAAGATTCCAAGGAGCTCTGAAAGACATCTTGAAAAAA
TTACCGACCATTGTGATGCTTCAAGAAGTTGTTCAACAAACATTCCTctc
tctttttattctcttcCCTCTTTACGTGATTCGAACATTGGAGCACGATG
GTTATTTCAATGTAATCATGTTCCTAAAGAAACCGCACGTGAAAGTCATT
GGTGAGTTGGACGGTTGGCATTTCTACTCTTCCCAAATGGATCGTCACTG
TTTGTTACAAAAACTATACATTCATGGAAAACCTGTTACagtgatgacgt
cacacttGGAAAGTTTAAAAGAATGTGCTGCAGAGagacaaaaacaattg
aaacaatgttttgaaacaataaCAGACTCGCCGAGCGACAcaaacttcat
ttttgctggTGACTTGAATATGAGGGCGGAAGATTTGAGACAGGTTGGTG
GGATCCCGCCCAAAATTACAGACGCCTGGGAAACGGCTGGAGAAGATCCA
AATGCAAAGTTTACTTGGGATCTGGAACTGAATGATAATAAAAAATTCGG
CGGTAATCGTAAACCACGTGCGCGCTTCGATCGAATGTATTTCAAAAGAG
CACAATCGAATCCAATGCAATGTATTGGATTTGAATTGATCGGTTTGGAG
AGATTGTCTTGTGGGATGTTCCCAAGTgatcattttggaattttaagcAA
ATTCATTCTTCCAGATGACTGACGAGGAATTATATggtgaaaaaatcttt
ttcatcatACGTTTAATTCCCTATGATATTATTTTTGGAcatacctcgga
ggtcctataaattaactgatgtccgtccgttcatccgtccgtccgtccgt
ctgttatcagcttttctcaggattggctcattagttgtttctaatttttt
gctcaaagatgcgtattcgcaatgcttaaaacatgaccgagttcgatttt
tgagaaaaaaaattttccagacaaaaatgccggaaatttccgtttttgca
gatttttattacaaagattatttataagaatgtccacgattaagcatggt
tcaatttttaatgaaactgattttggtacaggaactttctaaaaatcgct
agaacagccgagaatcgccggatttcttgaattattattattaatattat
tctgcattttcatactattgttgtcatttttcaattgtcttattacatat
cttcaggtaggtccattcagcatgtagcttgtttatATTATGTTTTACGT
TTTCGAGATTGTAAATATCGTGTTCAtagattatatttttttatcaatcg
TTTATTTAAAGAATTATATTATAC Run BLAST on NCBI transcript from alignment at scaffold_86:289155..298845+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072846 ID=TCONS_00072846|Name=TCONS_00072846|organism=Clytia hemisphaerica|type=transcript|length=9691bp|location=Sequence derived from alignment at scaffold_86:289155..298845+ (Clytia hemisphaerica)
TATAGATtactaaaaatgaaataaaaaactaGAAAGATTAATGAATGGAT
GGAAAAGATCACCAAAAGTAAGTCACCAGATCAGGATTGTTCAACTTTAA
CCAAAAAGACAAACTTGCCAGTAGAAGAATGGGGGGGAGGTAAGCCAGGA
AGAAATATTATAAGTCTAACATTGTcggcaataaatttttttttgttttt
tatttttcgtttcAATTACAATTGTCTTTCAAATAACAATTATGAATAAT
GACTGATTTcaacgatgacgtcataacttgACCTTTCTGTCCTTTACTTC
gcgaaatattacttttcagATAAGTGGTGCTCTTTGGAATGgttgtataa
ctttttttataatttcgagaaaaaaaaatccagtaTTTTATACTACTGAT
ACATGATAAATGTACCAAATTTCGGGGCTTATGGACTCACATAATGTTTC
AGTACTGATTCTGTAAAGATTTTATGCTTACTCTATTTCAGATGAAGTAG
TCATGATGATTTAGAAAGATAAAAGATATGGCACTCCCAACTTCCTCTTC
TGCAAAGCGAAAACAAAGgtttgatttcttttgatactTCGTTGGAAACA
TATTccttgaaaattctaaaaattaaaaaaaaggttgGAGTAGCAAACGA
TTACACGATACTACCTAacgcaccaacacttaacatttattttccaactt
ttaattgcactgttcaaaaataaaaacataacccccgtttttagtaataa
gttggagatttgatatttcacagaaaagtgctgcTAAGgagtatttcggg
tcccatatcttcctaAGGACTTtcctgtttgccttgaaatttgacaacct
tcttTACCTAAGGCTGAtttaccactggtgtaaaaattaaagttatagca
taaatagaaaaaaagcacaatttttacaatcgcaaatttaaccgctaaaa
atcgcgaatttttcaaccaaaaatacagtcaaatatagcgcttttgattc
tctaaaacaagcaaaaaaaaattccacaattatatttgactatcataAGT
CACAGGTATTCTTGTtcccactgccaattatatctggacagactttaggt
aTAGGATTTATCGAGGTTTGCCTTTTTTGAGATTTATCaaagttttaatt
tctttttcaaaaaaagtggattttaGAAATACAAAAGACGAAATGAATTT
CATTCTCAAAAATCTTTCCTTCACTTTTAAACCAATTTCAGGGAAGTCAT
TGTATTGAGTGATGACGACAacgatgatgacgtcatcactaaaCAACCGG
TAACGAAGAAAACTAAAGCAAAGAATAATGATGGAGACGATCTTACTCAT
TTATTAAATGACCAAAGTGATGACAACATCGCTAAACAACCGGTACCGAA
GAAAGCCAAAACAAATGATAGTGGGAAAGATGACCTCACTCATTTACTAA
ATAATGACGATGATGATTTAGCATTTCATGAGATCCCAGTATGCCTTTAA
GGACCATCCAGAAAATTAGTCAATGGCCAATTATTTAGGACCCATTGTTT
TTTACATCGTTATAAGATTCCCAAATTCCGTGAAATTACATTTTGAGAAA
TCCATTCTGATTGTTTTCCCGTCTGTCCGGAAACTTTTGGCCagcctttt
ttcatttttcaaaacatttttttggagtCCACGGAGAAATGCTTAGGGTC
TTCAAATGATTTGAGGCTACTGAATAAGCTTctttttattgagtttaatt
TTAAAATCTGGTTTTCCTTTTCAGACTGCGGATGATGGTGCAAATTCCAA
CGATACAACACCCGAGTAAGTATGAATACAATTTTTAAGTAACAGGAATT
ATCGatgttaaaattaaaaaacgacGATTTATTTACACTGAAACCTATCA
ACATTCTATATCAATGTTAAAGTCTTATCTCGTcataaaaataatcttta
attcCTGTTCTGGAAGCTCAAACGTTATATAAACGTATAAATACAAACAG
CATACTCTCTAATTTCCCCTGTAGAGCTCCACCTCAAGAAGGTCCAAAAG
AATTCACAGTGCTGTCATGGAACATTGATGGTTTGGAAGACGAATATTTG
ATGGAGAGATTCCAAGGAGCTCTGAAAGACATCTTGAAGAAATTACCGAC
CATTGTGATGCTTCAAGAAGTTGTCCACGAACATTACCTAAATTTAATTC
TCATCCTCTCCTCGTAagtgtttgttgtttgtttaaGGAACAATGGCCGA
GTGTTCGCAACAACAAATCCCCTCTCCTCTCAATGCTCATAGAGAGCGGA
GATGTTTGTtaaatgcggtgatagcatagcaaaattgagtggctttgaGG
GCTTTGAAGACCTGACTAGGCTCCAATTGACCCCCTGAAtacgatacacg
ttttttttattagaacccctaaaatttggctgagcctggatgtgcttatt
ttttggcagttttcagcctaaaatgttcttaaatgcgttcttaattttac
aGACTATACTCTAAATCGGCAATATCATGCacaataaagagcacttaaaa
ttggtaaaattcggacaatatttgactctcaattttagaaaatccatccc
taagttcggttaaaactgcttgaaaagaggaaaaaattatagtttcttgt
catttttttccaaactgaggctgggcatgttcttatgatgttcttaattt
ttcgaagaatttcagcctcagtgctcttataaactgggttctaataaaaa
ataaaacgtgtagaaaattctgaaaacgtCCTACATTTACGAGCTATCCA
CGTAATGTTGATTCTATATACACGCACGTNAAAACGTgtagaaaattctg
aaaacgtCCTACCTTTACGAGCTATCTACGTAATGTTGATTCTATCTACA
cgcacgtttttataagaaaaaattgaatagcAAAACAAAGGACCTTCTGT
ATAAAGGTTACTAAATACATTGTGTTTAGTTCAGTTTCTGGAACTGAAAA
AAGTGAGTTATCctttatacagggtgtcccgaataAAGGTGCTACGTCAG
ATCCTTTATATATAATTGGTGTTTAACTCGTCAACGAgtataaatcaaaa
tatgatttAAATAGCTTTACACTAGCAAAGTTTTATTATAGATCTAGCCG
CTGTACAGACCTTCAAAATTATTTCTCAGTCTACCGATGATATATTATTT
CTAGTGTTTACGAGGTTCGCTCTTTGATGCAGAATGGTTATTTCAATGTT
ATCCTGTTCCTAAAGAAATCACATGTAGAAATAATTGGTGAGCTGGACGG
TAAGTTTTTCCCTTCCTCTCAAATGCAACGCCACTATCTCTCTCAGAACA
TTCACATTTACGGGAAAAATATTACGGTGATGACGTCACACTTGGAAAGT
TTAAAAGAAAGCGCAGCAGAGAGACAAAAACAgttgaaacaatgttttca
AATGATGACGGATTCACCTTGCGAtacaaactttatttttgctGGTGATT
TGAATATGAGGGCGGaagatttaaagaaagttgGCGGGATTCCGCCTAAA
ATTACGGACGCCTGGGAAACGGCTGGAGAAAATCCGGGCACCAAGTTCAC
TTGGGATCTGGAATTGAATGATAATAAACGGTTTCCGAACTGTAAACCAC
GTGCACGTTTTGACCGGATGTTTTTCAAGAGATCACAATCGACTCCGGTT
CAATGTATTGGTTTTGAACTGGTTGGATTTGAAAGACTGTCGTGTGGGAT
GTTTCCGAGtgaccattttggaattttaggcAAATTTATTCTTCCAGATG
ACTAAATATAGTAgagttttttgaatttatttttacattGTATTTTGCGT
TTTAGAGATTATGTATGTATGTTTTTTatcaatcttttatttttaaagaa
ccATATTCACCTCTTGATCACGTTTATTTTATCCCCAataagaaaagttt
ttattcCAGGTACCATGATCGGAGTGAAGTACTGATACAGTAGTTGAAAG
TACATTATATTCAGAATTTCTCTATACTATAGACTGAATTagtaaacttt
caaaactagaTTAGGAAAAAAGTTGGTGTAATCCCCACAAGAggttgaaa
atgttttccacGTTCACgcttaaagtttctttttttcttcttctcaaGTT
CACTTTATCTTTCTATAACAAGGGACTCTAACAATCATCGAAAGTTGATA
TTTTCGATGACTGATTTAAAAAAGTGActtaaaaattgttgtttttatat
tttagagagtaaatgaaaaaaataataaataaacgAAGAAAGAGATCAAC
GCAGGTAAGACGTAAAGGGAAACTAAAACTTTGATAAAAACTTACCCATA
ATGTTTTTAGTAAGCTCAACTAGGAAGAAATTTTAAGCAATTGGACAATA
CCAACCGAGAAAACACCCTTTTCAccgatttaaaatttttctttttgtta
aagTCCATTTTACAACATAAGTAACCCTATAAATGAGCCAGTTGGTCATT
CTTCTATTATCAGTTTTTCttgtgattggctcattagctttttatgatat
tttgcatGACGATGctgatgatttgattttgttagGATTACTCAAATGGG
ATTAGTCGACGTAGTTCACAAATGTTGATTTTGTTTGATCTTCACTGACC
ATTATTTTACAGGAAAACGTCTCGAATCTTTCATTTTACAACAAAGCTCT
TGCTTCATATCATCGAATGTAAAGTTCACAATGATTGAGAAGATAGGGTG
ATATGGAAGTCCCAACCTCGTCTACTGCAAAGCGAAAGCAAAGGTTTTTT
AGTACCTTGTTGACAAATTTCTCTTCGCGAACCAATGTTTTGTAAATCAA
TTTAACCAGATTAGTTGTTCAGCTCAGTAGAGTAtcaagtaataagattc
ttggCTTTTACACATGTTTTATCCAAGTTTGGTTTTTTTGAAATAcacta
ttttttttctcttgtcGTTCAATTTTGTTAGGGAAGTCGTTGTACTGAGT
GATGACGACAATGATAAAGAAGATGGCGCCGTCGCTAATCTGCTGGTACC
GAAGAAAACCGAAACAGAGAATTGCGATGGAGACGATCTTACTCATCTAT
TGAATGACAAAGATAATGACATCATCGTCAACCAACCGGTACCGAAGAAA
GCAAAAACAAATGACATTGGTGGAGATGACCTCACTTATTTATTGAATGA
CAAAGATGACGACATCATCGCCAACCAACCGGTACCGAAGAAAGCCCAAA
CAAATGATAGTGGGAAAGATGACCTCACTCATTTACTgaatgatgacgat
gatgatttAGCGTTTTACGGAATCTCAGTAAGCTCTAAGgacaattcaaa
ttttacttAAAGATAAACAATTGATATGCTATATTGCTTTAATTGATCTT
GGTCAATCAACGTGGTATTCTATCTAGTTGTCGATACAATAACACTAAGA
GAGCCCTGTTGTAccatataaataaaaaattgattggAGTACCGCAAATT
TTTTCCGTCAGTAGATgcagacctgatttagcggccgaagacctgattaG
AAAGTTACCGGCCTAATCTGAAGTTAGGGTAGTATGAATATATTGCACCT
CTCGGAATAGCATCAGTTGCGATGGCCCAGTGGTTACCACAGTGGTCTTG
TAGACGGGAGATGAGTAGTTCAATATGAGGTATTCGCAttaatttcattc
tttttagtttaaaatcttttaacttgttttttttttcaaaacatttccat
tgaaacatcatataaAAATCTTGCTTGAATTCATATAAAGGATATAAAAC
AAATTTCTACTCAATTTATTTTCTGCAAGTCTTCGGCCTAGATACGAACG
CTAAATCAGGTCTGTGACCGTTAGTTTAGGTTTGCGTTCGCTGATTGAAA
AGGAATCTGTGGAGGTTCGTGCATATAAAAGTACCCCACATCTGTTATAT
AACTGTATCATTTTAATTCGTTAATGATTTTATTATTCAGGCTCAGGAAG
ATGTTTCATCTAAAGCTTCTCCGTCAGTGTAAGCATCATATTTTGTTAAA
GCAGAATGCAGTACCCTTTTTACAAAGACTTTTGTCCTGTGTTTCacaaa
aattagtgaaaatgggggggggggttataaATGAATTAAATTCAACAAAt
caagtctttttttttgctccATTCGCAAAAGTGAATActcgcgaaattca
aaaatttcggcAAAAGCTTTTTTACGCAAAAGATTTTCCCCTAGAACTAT
GTTTTTGCAATATACGttcaatatcaaaaatctttttcttgtgCTATAGA
GCTCCACCTCAAGAAGGTTCAAAAGAGTTCACAGTGCTGTCATGGAACAT
TGATGGTTTGGAAGAAGAATATTTGATGGAAAGATTCCAAGGAGCTCTGA
AAGACATCTTGAAAAAATTACCGACCATTGTGATGCTTCAAGAAGTTGTT
CAACAAACATTCCTctctctttttattctcttcCCGTAAGTCCTAATTTC
TGATTTTGAAAATGTCGTGTATTCCTTATCACTTGGAATAACTATTTGCT
TCTTTTCAGTACCCCTCTTTAGAGAAAAGCCGACGGGAAAAGATTtccaa
taaattttattttattgaataaacGTCTTTTCTCTAGAAGGGACGTGAAT
CTTATAGTTGTAAGTTACTGTAAGGAAGTTCGTATTTGTCTGATATGACT
GGCAATAGCAAAACCCAATTGTTTTCGAACCCCTAGTCCCCATTTTGTAT
GAAGGAGCTGCCATCGAAAATCTTATTTATTAGGGTGTTTACTCGCTGAC
CTTtttataccctggaccaagtttctcaatcccggccaagcaaaatcttt
gatcagagttttttgaaaagtggtaccctaatggcggcactgaTCAATGT
gtaatgcatcgagagcgctagatctactttccctcgaaaacttttgatga
tgtagcggcgttaaggccggcgcaaatgaatccaacattcaatccaacat
ttccaattcattgttggacgaaatgttggacgaaaagtcacgtggaaaaa
tttgaaaagttgcatgaaaagtcatttgcgcaaAAACNGGAACTATGTTT
TTGCAATATACGttcaatatcaaaaatctttttcttgtgCTATAGAGCTC
CACCTCAAGAAGGTTCCAAAGAGTTCACAGTGCTGTCTTGGAACATTGAT
GGTTTGGAAGACGAATATTTGATGGAGAGATTCCAAGGAGCTCTGAAAGA
CATCTTGAAAAAATTACCGACCATTGTGATGCTTCAAGAAGTTGTTCAAC
AAACATTCCTctctctttttattctcttcCCGTAAGTCCTAatttctgat
tttgaaaaatgtcgtGTATTCCTTATCACTTGGAATAACTACTTGCTTCT
TTTCAGTATCCCCGACGGGAAAAGATTTCCaataaattttattattatta
aaaaaaaaaacttttttattgaaTAAACGTCTTTTCTCTAGAAGGGACGT
GAATCTTATAGTTGTAAGTTACTGTAAGGAAGTTCGTATTTGTCTGATAT
GACTGGCAATAGCAAAACCCAATTGTTTTCGAACCCCTAGTCCCCATTTT
GTATGAAGGAGCTGCCATCGAAAATCTTATTTATTAGGGTGTTTACTCGC
TGACCTTtttataccctggaccaagtttctcaattccggccaagcaaaat
ctttgatcagagttttttgaaaagtggtaccctaatggcggcactgaTCA
ATGTgtaatgcatcgagagcgctagatctactttccctcgaaaacttttg
atgatgtagcggcgttaaggccggcgcaaatgaatccaacatttccaatt
cattgttggacgaaatgttggacgaaaagtcacgtggaaaaatttgaaaa
gttgcatgaaaagtcatttgcgcaaaaatgtcaaacattttcatccaaca
cgATTACGCAAATTCATACAACATTGAAACCaacataaaagtgacgtcaa
tctcattaaaaaatgttggatgaaaagttTGACGGCGATCAAtcttcatc
caacatgatttccaacaattttcttaaaaagttgcaattttaagACTTGC
GCAAACGaacccaacatttgatccaacaataatgtgggatcaaatgttgg
attcatttgcaGAGGTTATTggaacactgcaatggcttctttacgggcac
caattcaaaaaaaaaaccttagatcaaagatggcggatatatcTTGggcc
agggatatataaaggtcagtgggttcACTACATAAAAGCACAATCATCAA
CTGAGTGAATATAAGTGAACTAAAATTTTGATTCACAAGTTCTGTCAGTt
gccttttcaacattttgatactgggaaaattgaaaacaatagGTTTCAAA
ATCACCTTAAAATAATGGGATAAGTAAGAAAAAGGAATATAAAACGCCTT
TATACACCTCCAAGTTTACGGACGGTTCATTTTAGTCTTTACGTGATTCG
AACATTGGAGCACGATGGTTATTTCAATGTAATCATGTTCCTAAAGAAAC
CGCACGTGAAAGTCATTGGTGAGTTGGACGGTTGGCATTTCTACTCTTCC
CAAATGGATCGTCACTGTTTGTTACAAAAACTATACATTCATGGAAAACC
TGTTACagtgatgacgtcacacttGGAAAGTTTAAAAGAATGTGCTGCAG
AGagacaaaaacaattgaaacaatgttttgaaacaataaCAGACTCGCCG
AGCGACAcaaacttcatttttgctggTGACTTGAATATGAGGGCGGAAGA
TTTGAGACAGGTTGGTGGGATCCCGCCCAAAATTACAGACGCCTGGGAAA
CGGCTGGAGAAGATCCAAATGCAAAGTTTACTTGGGATCTGGAACTGAAT
GATAATAAAAAATTCGGCGGTAATCGTAAACCACGTGCGCGCTTCGATCG
AATGTATTTCAAAAGAGCACAATCGAATCCAATGCAATGTATTGGATTTG
AATTGATCGGTTTGGAGAGATTGTCTTGTGGGATGTTCCCAAGTgatcat
tttggaattttaagcAAATTCATTCTTCCAGATGACTGACGAGGAATTAT
ATggtgaaaaaatctttttcatcatACGTTTAATTCCCTATGATATTATT
TTTGGAcatacctcggaggtcctataaattaactgatgtccgtccgttca
tccgtccgtccgtccgtctgttatcagcttttctcaggattggctcatta
gttgtttctaattttttgctcaaagatgcgtattcgcaatgcttaaaaca
tgaccgagttcgatttttgagaaaaaaaattttccagacaaaaatgccgg
aaatttccgtttttgcagatttttattacaaagattatttataagaatgt
ccacgattaagcatggttcaatttttaatgaaactgattttggtacagga
actttctaaaaatcgctagaacagccgagaatcgccggatttcttgaatt
attattattaatattattctgcattttcatactattgttgtcatttttca
attgtcttattacatatcttcaggtaggtccattcagcatgtagcttgtt
tatATTATGTTTTACGTTTTCGAGATTGTAAATATCGTGTTCAtagatta
tatttttttatcaatcgTTTATTTAAAGAATTATATTATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072846-exon-scaffold_86-1491911889:289155..289221 | TCONS_00072846-exon-scaffold_86-1491911889:289155..289221 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1510915933:289155..289221 | TCONS_00072846-exon-scaffold_86-1510915933:289155..289221 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1575043694:289155..289221 | TCONS_00072846-exon-scaffold_86-1575043694:289155..289221 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1491911889:289646..289722 | TCONS_00072846-exon-scaffold_86-1491911889:289646..289722 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1510915933:289646..289722 | TCONS_00072846-exon-scaffold_86-1510915933:289646..289722 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1575043694:289646..289722 | TCONS_00072846-exon-scaffold_86-1575043694:289646..289722 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1491911889:290396..290642 | TCONS_00072846-exon-scaffold_86-1491911889:290396..290642 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1510915933:290396..290642 | TCONS_00072846-exon-scaffold_86-1510915933:290396..290642 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1575043694:290396..290642 | TCONS_00072846-exon-scaffold_86-1575043694:290396..290642 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1491911889:290929..290969 | TCONS_00072846-exon-scaffold_86-1491911889:290929..290969 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1510915933:290929..290969 | TCONS_00072846-exon-scaffold_86-1510915933:290929..290969 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1575043694:290929..290969 | TCONS_00072846-exon-scaffold_86-1575043694:290929..290969 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1491911889:295454..295639 | TCONS_00072846-exon-scaffold_86-1491911889:295454..295639 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1510915933:295454..295639 | TCONS_00072846-exon-scaffold_86-1510915933:295454..295639 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1575043694:295454..295639 | TCONS_00072846-exon-scaffold_86-1575043694:295454..295639 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1491911889:297640..298845 | TCONS_00072846-exon-scaffold_86-1491911889:297640..298845 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1510915933:297640..298845 | TCONS_00072846-exon-scaffold_86-1510915933:297640..298845 | Clytia hemisphaerica | exon |
| TCONS_00072846-exon-scaffold_86-1575043694:297640..298845 | TCONS_00072846-exon-scaffold_86-1575043694:297640..298845 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_86 | supercontig | scaffold_86:289155..298845 + |
Blast
BLAST of TCONS_00072846 vs. Swiss-Prot (Human)
Match: TYDP2 (Tyrosyl-DNA phosphodiesterase 2 OS=Homo sapiens GN=TDP2 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 5.630e-47 Identity = 99/270 (36.67%), Postives = 147/270 (54.44%), Query Frame = 2
Query: 401 DGANSNDTTPEAPPQEGSKEFTVLSWNIDGLEEEYLMERFQGALKDILKKLPTIVMLQEVVQQTFLSLFILFPLYVIRTLEHDGYFNVIMFLKKPHVKVIGELDGWHFYSSQMDRHCLLQKLYIHGKPVTVMTSHLESLKECAAERQKQLKQCFETITDSPSDTNFIFAGDLNMRAEDLRQVGGIPPKITDAWETAGEDPNAKFTWDLELNDNKKFGGNRKPRARFDRMYFKRAQSNPMQCI--GFELIGLERLSCGMFPSDHFGILSKF 1204
D S + E QE F++++WNIDGL+ L ER +G + P ++ LQEV+ + L Y I T +GYF IM LKK VK+ + + F S++M R+ L + + G + +MTSHLES + AAER QLK + + ++P IFAGD N+R ++ + GG+P I D WE G+ + ++TWD ++N N G + RFDR++F RA + I +L+GLE+L CG FPSDH+G+L
Sbjct: 94 DSTTSKISPSEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYSPDVIFLQEVIPPYYSYLKKRSSNYEIITGHEEGYFTAIM-LKKSRVKLKSQ-EIIPFPSTKMMRNLLCVHVNVSGNELCLMTSHLESTRGHAAERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSN--LGITAACKLRFDRIFF-RAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNL 358
The following BLAST results are available for this feature:
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